Search of human proteins with 13376824

Search of human proteins with 13376824

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|13376824 UL16 binding protein 2 [Homo sapiens]
         (246 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|13376824 UL16 binding protein 2 [Homo sapiens]                     510   e-145
gi|126723295 retinoic acid early transcript 1L [Homo sapiens]         479   e-136
gi|130484306 retinoic acid early transcript 1G [Homo sapiens]         438   e-123
gi|13376826 UL16 binding protein 1 [Homo sapiens]                     292   2e-79
gi|13375656 UL16 binding protein 3 [Homo sapiens]                     241   5e-64
gi|21040249 retinoic acid early transcript 1E [Homo sapiens]          128   5e-30
gi|4504377 hemochromatosis protein isoform 1 precursor [Homo sap...    68   8e-12
gi|21040353 hemochromatosis protein isoform 9 precursor [Homo sa...    67   1e-11
gi|4504417 major histocompatibility complex, class I-related [Ho...    66   2e-11
gi|21040347 hemochromatosis protein isoform 6 precursor [Homo sa...    65   7e-11
gi|4502337 alpha-2-glycoprotein 1, zinc [Homo sapiens]                 62   3e-10
gi|17986001 major histocompatibility complex, class I, B precurs...    58   7e-09
gi|62912479 major histocompatibility complex, class I, E precurs...    57   1e-08
gi|24797067 major histocompatibility complex, class I, A precurs...    53   3e-07
gi|21040349 hemochromatosis protein isoform 7 precursor [Homo sa...    52   5e-07
gi|209862839 Fc fragment of IgG, receptor, transporter, alpha [H...    50   2e-06
gi|4758346 Fc fragment of IgG, receptor, transporter, alpha [Hom...    50   2e-06
gi|167857788 MHC class I polypeptide-related sequence B [Homo sa...    49   3e-06
gi|21040351 hemochromatosis protein isoform 8 precursor [Homo sa...    49   4e-06
gi|4504415 major histocompatibility complex, class I, G precurso...    47   2e-05
gi|149158700 major histocompatibility complex, class I, F isofor...    47   2e-05
gi|52630342 major histocompatibility complex, class I, C precurs...    46   3e-05
gi|149158702 major histocompatibility complex, class I, F isofor...    44   1e-04
gi|149158698 major histocompatibility complex, class I, F isofor...    44   1e-04
gi|89063265 PREDICTED: similar to MHC class I antigen [Homo sapi...    44   1e-04
gi|4557751 MHC class I polypeptide-related sequence A [Homo sapi...    40   0.002
gi|4502599 carbonyl reductase 1 [Homo sapiens]                         32   0.51 
gi|51871374 UTP14, U3 small nucleolar ribonucleoprotein, homolog...    31   1.1  
gi|156151443 alpha-kinase 1 [Homo sapiens]                             30   1.5  
gi|156151441 alpha-kinase 1 [Homo sapiens]                             30   1.5  

>gi|13376824 UL16 binding protein 2 [Homo sapiens]
          Length = 246

 Score =  510 bits (1314), Expect = e-145
 Identities = 246/246 (100%), Positives = 246/246 (100%)

Query: 1   MAAAAATKILLCLPLLLLLSGWSRAGRADPHSLCYDITVIPKFRPGPRWCAVQGQVDEKT 60
           MAAAAATKILLCLPLLLLLSGWSRAGRADPHSLCYDITVIPKFRPGPRWCAVQGQVDEKT
Sbjct: 1   MAAAAATKILLCLPLLLLLSGWSRAGRADPHSLCYDITVIPKFRPGPRWCAVQGQVDEKT 60

Query: 61  FLHYDCGNKTVTPVSPLGKKLNVTTAWKAQNPVLREVVDILTEQLRDIQLENYTPKEPLT 120
           FLHYDCGNKTVTPVSPLGKKLNVTTAWKAQNPVLREVVDILTEQLRDIQLENYTPKEPLT
Sbjct: 61  FLHYDCGNKTVTPVSPLGKKLNVTTAWKAQNPVLREVVDILTEQLRDIQLENYTPKEPLT 120

Query: 121 LQARMSCEQKAEGHSSGSWQFSFDGQIFLLFDSEKRMWTTVHPGARKMKEKWENDKVVAM 180
           LQARMSCEQKAEGHSSGSWQFSFDGQIFLLFDSEKRMWTTVHPGARKMKEKWENDKVVAM
Sbjct: 121 LQARMSCEQKAEGHSSGSWQFSFDGQIFLLFDSEKRMWTTVHPGARKMKEKWENDKVVAM 180

Query: 181 SFHYFSMGDCIGWLEDFLMGMDSTLEPSAGAPLAMSSGTTQLRATATTLILCCLLIILPC 240
           SFHYFSMGDCIGWLEDFLMGMDSTLEPSAGAPLAMSSGTTQLRATATTLILCCLLIILPC
Sbjct: 181 SFHYFSMGDCIGWLEDFLMGMDSTLEPSAGAPLAMSSGTTQLRATATTLILCCLLIILPC 240

Query: 241 FILPGI 246
           FILPGI
Sbjct: 241 FILPGI 246


>gi|126723295 retinoic acid early transcript 1L [Homo sapiens]
          Length = 246

 Score =  479 bits (1234), Expect = e-136
 Identities = 232/246 (94%), Positives = 233/246 (94%)

Query: 1   MAAAAATKILLCLPLLLLLSGWSRAGRADPHSLCYDITVIPKFRPGPRWCAVQGQVDEKT 60
           MAAAA   +LLCLPLL LL GWSRA R DPHSLCYDITVIPKFRPGPRWCAVQGQVDEKT
Sbjct: 1   MAAAAIPALLLCLPLLFLLFGWSRARRDDPHSLCYDITVIPKFRPGPRWCAVQGQVDEKT 60

Query: 61  FLHYDCGNKTVTPVSPLGKKLNVTTAWKAQNPVLREVVDILTEQLRDIQLENYTPKEPLT 120
           FLHYDCGNKTVTPVSPLGKKLNVT AWKAQNPVLREVVDILTEQL DIQLENYTPKEPLT
Sbjct: 61  FLHYDCGNKTVTPVSPLGKKLNVTMAWKAQNPVLREVVDILTEQLLDIQLENYTPKEPLT 120

Query: 121 LQARMSCEQKAEGHSSGSWQFSFDGQIFLLFDSEKRMWTTVHPGARKMKEKWENDKVVAM 180
           LQARMSCEQKAEGHSSGSWQFS DGQ FLLFDSEKRMWTTVHPGARKMKEKWENDK VAM
Sbjct: 121 LQARMSCEQKAEGHSSGSWQFSIDGQTFLLFDSEKRMWTTVHPGARKMKEKWENDKDVAM 180

Query: 181 SFHYFSMGDCIGWLEDFLMGMDSTLEPSAGAPLAMSSGTTQLRATATTLILCCLLIILPC 240
           SFHY SMGDCIGWLEDFLMGMDSTLEPSAGAPLAMSSGTTQLRATATTLILCCLLIILPC
Sbjct: 181 SFHYISMGDCIGWLEDFLMGMDSTLEPSAGAPLAMSSGTTQLRATATTLILCCLLIILPC 240

Query: 241 FILPGI 246
           FILPGI
Sbjct: 241 FILPGI 246


>gi|130484306 retinoic acid early transcript 1G [Homo sapiens]
          Length = 334

 Score =  438 bits (1126), Expect = e-123
 Identities = 212/237 (89%), Positives = 216/237 (91%)

Query: 1   MAAAAATKILLCLPLLLLLSGWSRAGRADPHSLCYDITVIPKFRPGPRWCAVQGQVDEKT 60
           MAAAA+   LL LPLLLLLS W R G ADPHSLCYDITVIPKFRPGPRWCAVQGQVDEKT
Sbjct: 1   MAAAASPAFLLRLPLLLLLSSWCRTGLADPHSLCYDITVIPKFRPGPRWCAVQGQVDEKT 60

Query: 61  FLHYDCGNKTVTPVSPLGKKLNVTTAWKAQNPVLREVVDILTEQLRDIQLENYTPKEPLT 120
           FLHYDCG+KTVTPVSPLGKKLNVTTAWKAQNPVLREVVDILTEQL DIQLENY PKEPLT
Sbjct: 61  FLHYDCGSKTVTPVSPLGKKLNVTTAWKAQNPVLREVVDILTEQLLDIQLENYIPKEPLT 120

Query: 121 LQARMSCEQKAEGHSSGSWQFSFDGQIFLLFDSEKRMWTTVHPGARKMKEKWENDKVVAM 180
           LQARMSCEQKAEGH SGSWQ SFDGQIFLLFDSE RMWTTVHPGARKMKEKWENDK + M
Sbjct: 121 LQARMSCEQKAEGHGSGSWQLSFDGQIFLLFDSENRMWTTVHPGARKMKEKWENDKDMTM 180

Query: 181 SFHYFSMGDCIGWLEDFLMGMDSTLEPSAGAPLAMSSGTTQLRATATTLILCCLLII 237
           SFHY SMGDC GWLEDFLMGMDSTLEPSAGAP  MSSGT Q RATATTLILCCLLI+
Sbjct: 181 SFHYISMGDCTGWLEDFLMGMDSTLEPSAGAPPTMSSGTAQPRATATTLILCCLLIM 237


>gi|13376826 UL16 binding protein 1 [Homo sapiens]
          Length = 244

 Score =  292 bits (748), Expect = 2e-79
 Identities = 146/245 (59%), Positives = 170/245 (69%), Gaps = 2/245 (0%)

Query: 1   MAAAAATKILLCLPLLLLLSGWSRAGRADPHSLCYDITVIPKFRPGPRWCAVQGQVDEKT 60
           MAAAA+   LLCLPLL LLSGWSRAG  D H LCYD  + PK RP P+WC VQG VDE+ 
Sbjct: 1   MAAAASPAFLLCLPLLHLLSGWSRAGWVDTHCLCYDFIITPKSRPEPQWCEVQGLVDERP 60

Query: 61  FLHYDCGNKTVTPVSPLGKKLNVTTAWKAQNPVLREVVDILTEQLRDIQLENYTPKEPLT 120
           FLHYDC N      + LGKK+NVT  W+ Q   LR+VVD L  QL DIQ+EN  P EPLT
Sbjct: 61  FLHYDCVNHKAKAFASLGKKVNVTKTWEEQTETLRDVVDFLKGQLLDIQVENLIPIEPLT 120

Query: 121 LQARMSCEQKAEGHSSGSWQFSFDGQIFLLFDSEKRMWTTVHPGARKMKEKWENDKVVAM 180
           LQARMSCE +A GH  GSWQF F+GQ FLLFDS  R WT +HPGA+KM EKWE ++ V M
Sbjct: 121 LQARMSCEHEAHGHGRGSWQFLFNGQKFLLFDSNNRKWTALHPGAKKMTEKWEKNRDVTM 180

Query: 181 SFHYFSMGDCIGWLEDFLMGMDSTLEPSAGAPLAMSSGTTQLRATATTLILCCLLIILPC 240
            F   S+GDC  WLE+FLM  +  L+P+   P +++ GTTQ +A ATTL    LLII  C
Sbjct: 181 FFQKISLGDCKMWLEEFLMYWEQMLDPT--KPPSLAPGTTQPKAMATTLSPWSLLIIFLC 238

Query: 241 FILPG 245
           FIL G
Sbjct: 239 FILAG 243


>gi|13375656 UL16 binding protein 3 [Homo sapiens]
          Length = 244

 Score =  241 bits (614), Expect = 5e-64
 Identities = 134/247 (54%), Positives = 158/247 (63%), Gaps = 4/247 (1%)

Query: 1   MAAAAATKILLCLPLL-LLLSGWSRAGRADPHSLCYDITVIPKFRPGPRWCAVQGQVDEK 59
           MAAAA+  IL  L +L  LL  WS  GRAD HSL Y+ T+I   R G +WC VQ QVD+K
Sbjct: 1   MAAAASPAILPRLAILPYLLFDWSGTGRADAHSLWYNFTIIHLPRHGQQWCEVQSQVDQK 60

Query: 60  TFLHYDCGNKTVTPVSPLGKKLNVTTAWKAQNPVLREVVDILTEQLRDIQLENYTPKEPL 119
            FL YDCG+  V  +  L ++L  T AW  Q  +LREV   L  +L D +LE++TP  PL
Sbjct: 61  NFLSYDCGSDKVLSMGHLEEQLYATDAWGKQLEMLREVGQRLRLELADTELEDFTPSGPL 120

Query: 120 TLQARMSCEQKAEGHSSGSWQFSFDGQIFLLFDSEKRMWTTVHPGARKMKEKWENDKVVA 179
           TLQ RMSCE +A+G+  GSWQFSFDG+ FLLFDS  R WT VH GAR+MKEKWE D  + 
Sbjct: 121 TLQVRMSCECEADGYIRGSWQFSFDGRKFLLFDSNNRKWTVVHAGARRMKEKWEKDSGLT 180

Query: 180 MSFHYFSMGDCIGWLEDFLMGMDSTLEPSAGAPLAMSSGTTQLRATATTLILCCLLIILP 239
             F   SM DC  WL DFLM     LEP+  AP  M+ G  Q +A ATTL     LIIL 
Sbjct: 181 TFFKMVSMRDCKSWLRDFLMHRKKRLEPT--APPTMAPGLAQPKAIATTLSPWSFLIIL- 237

Query: 240 CFILPGI 246
           CFILPGI
Sbjct: 238 CFILPGI 244


>gi|21040249 retinoic acid early transcript 1E [Homo sapiens]
          Length = 263

 Score =  128 bits (321), Expect = 5e-30
 Identities = 74/205 (36%), Positives = 110/205 (53%), Gaps = 5/205 (2%)

Query: 4   AAATKILLCLPLLLLLSGWSRAGRADPHSLCYDITVIPKFRPGPRWCAVQGQVDEKTFLH 63
           ++  ++LL L LLL+       G    HSLC++ T+    RPG  WC  Q  +++  FL 
Sbjct: 8   SSPVRLLLFLLLLLIALEIMVGG----HSLCFNFTIKSLSRPGQPWCEAQVFLNKNLFLQ 63

Query: 64  YDCGNKTVTPVSPLGKKLNVTTAWKAQNPVLREVVDILTEQLRDIQLENYTPKEPLTLQA 123
           Y+  N  V P+  LGKK+  T+ W      L EV   L   L DI+ +  T  +P TLQ 
Sbjct: 64  YNSDNNMVKPLGLLGKKVYATSTWGELTQTLGEVGRDLRMLLCDIKPQIKT-SDPSTLQV 122

Query: 124 RMSCEQKAEGHSSGSWQFSFDGQIFLLFDSEKRMWTTVHPGARKMKEKWENDKVVAMSFH 183
            M C+++AE  +  SWQF+ +G+  LLFD+    WT ++  A K+KE W+ D+ +   F 
Sbjct: 123 EMFCQREAERCTGASWQFATNGEKSLLFDAMNMTWTVINHEASKIKETWKKDRGLEKYFR 182

Query: 184 YFSMGDCIGWLEDFLMGMDSTLEPS 208
             S GDC  WL +FL   ++  EP+
Sbjct: 183 KLSKGDCDHWLREFLGHWEAMPEPT 207


>gi|4504377 hemochromatosis protein isoform 1 precursor [Homo
           sapiens]
          Length = 348

 Score = 67.8 bits (164), Expect = 8e-12
 Identities = 59/219 (26%), Positives = 89/219 (40%), Gaps = 5/219 (2%)

Query: 13  LPLLLLLSGWSRAGRA-DPHSLCYDITVIPKFRPGPRWCAVQGQVDEKTFLHYDCGNKTV 71
           L LL+LL      GR    HSL Y      +   G       G VD++ F+ YD  ++ V
Sbjct: 9   LLLLMLLQTAVLQGRLLRSHSLHYLFMGASEQDLGLSLFEALGYVDDQLFVFYDHESRRV 68

Query: 72  TPVSPLGKKLNVTTAWKAQNPVLREVVDILTEQLRDIQLENYTPKEPLTLQARMSCEQKA 131
            P +P       +  W   +  L+    + T     I   +   KE  TLQ  + CE + 
Sbjct: 69  EPRTPWVSSRISSQMWLQLSQSLKGWDHMFTVDFWTIMENHNHSKESHTLQVILGCEMQE 128

Query: 132 EGHSSGSWQFSFDGQIFLLFDSEKRMWTTVHPGARKMKEKWENDKVVAMSFHYFSMGDCI 191
           +  + G W++ +DGQ  L F  +   W    P A   K +WE  K+ A     +   DC 
Sbjct: 129 DNSTEGYWKYGYDGQDHLEFCPDTLDWRAAEPRAWPTKLEWERHKIRARQNRAYLERDCP 188

Query: 192 GWLEDFL-MG---MDSTLEPSAGAPLAMSSGTTQLRATA 226
             L+  L +G   +D  + P       ++S  T LR  A
Sbjct: 189 AQLQQLLELGRGVLDQQVPPLVKVTHHVTSSVTTLRCRA 227


>gi|21040353 hemochromatosis protein isoform 9 precursor [Homo
           sapiens]
          Length = 325

 Score = 67.0 bits (162), Expect = 1e-11
 Identities = 47/177 (26%), Positives = 75/177 (42%), Gaps = 4/177 (2%)

Query: 54  GQVDEKTFLHYDCGNKTVTPVSPLGKKLNVTTAWKAQNPVLREVVDILTEQLRDIQLENY 113
           G VD++ F+ YD  ++ V P +P       +  W   +  L+    + T     I   + 
Sbjct: 28  GYVDDQLFVFYDHESRRVEPRTPWVSSRISSQMWLQLSQSLKGWDHMFTVDFWTIMENHN 87

Query: 114 TPKEPLTLQARMSCEQKAEGHSSGSWQFSFDGQIFLLFDSEKRMWTTVHPGARKMKEKWE 173
             KE  TLQ  + CE + +  + G W++ +DGQ  L F  +   W    P A   K +WE
Sbjct: 88  HSKESHTLQVILGCEMQEDNSTEGYWKYGYDGQDHLEFCPDTLDWRAAEPRAWPTKLEWE 147

Query: 174 NDKVVAMSFHYFSMGDCIGWLEDFL-MG---MDSTLEPSAGAPLAMSSGTTQLRATA 226
             K+ A     +   DC   L+  L +G   +D  + P       ++S  T LR  A
Sbjct: 148 RHKIRARQNRAYLERDCPAQLQQLLELGRGVLDQQVPPLVKVTHHVTSSVTTLRCRA 204


>gi|4504417 major histocompatibility complex, class I-related [Homo
           sapiens]
          Length = 341

 Score = 66.2 bits (160), Expect = 2e-11
 Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 5/195 (2%)

Query: 13  LPLLLLLSGWSRAGRADPHSLCY-DITVIPKFRPGPRWCAVQGQVDEKTFLHYDCGNKTV 71
           LPL+++L       R   HSL Y  + V       P + +V G VD      YD   +  
Sbjct: 9   LPLIIVLMVKHSDSRT--HSLRYFRLGVSDPIHGVPEFISV-GYVDSHPITTYDSVTRQK 65

Query: 72  TPVSPLGKKLNVTTAWKAQNPVLREVVDILTEQLRDIQLENYTPKEPLTLQARMSCEQKA 131
            P +P   +      W+    +LR    +   +L+ +Q  +Y      T Q  + CE   
Sbjct: 66  EPRAPWMAENLAPDHWERYTQLLRGWQQMFKVELKRLQ-RHYNHSGSHTYQRMIGCELLE 124

Query: 132 EGHSSGSWQFSFDGQIFLLFDSEKRMWTTVHPGARKMKEKWENDKVVAMSFHYFSMGDCI 191
           +G ++G  Q+++DGQ FL+F+ +   W  V   A  +K+ WE ++   +    +   +CI
Sbjct: 125 DGSTTGFLQYAYDGQDFLIFNKDTLSWLAVDNVAHTIKQAWEANQHELLYQKNWLEEECI 184

Query: 192 GWLEDFLMGMDSTLE 206
            WL+ FL     TL+
Sbjct: 185 AWLKRFLEYGKDTLQ 199


>gi|21040347 hemochromatosis protein isoform 6 precursor [Homo
           sapiens]
          Length = 334

 Score = 64.7 bits (156), Expect = 7e-11
 Identities = 51/187 (27%), Positives = 76/187 (40%), Gaps = 1/187 (0%)

Query: 13  LPLLLLLSGWSRAGRA-DPHSLCYDITVIPKFRPGPRWCAVQGQVDEKTFLHYDCGNKTV 71
           L LL+LL      GR    HSL Y      +   G       G VD++ F+ YD  ++ V
Sbjct: 9   LLLLMLLQTAVLQGRLLRSHSLHYLFMGASEQDLGLSLFEALGYVDDQLFVFYDHESRRV 68

Query: 72  TPVSPLGKKLNVTTAWKAQNPVLREVVDILTEQLRDIQLENYTPKEPLTLQARMSCEQKA 131
            P +P       +  W   +  L+    + T     I   +   KE  TLQ  + CE + 
Sbjct: 69  EPRTPWVSSRISSQMWLQLSQSLKGWDHMFTVDFWTIMENHNHSKESHTLQVILGCEMQE 128

Query: 132 EGHSSGSWQFSFDGQIFLLFDSEKRMWTTVHPGARKMKEKWENDKVVAMSFHYFSMGDCI 191
           +  + G W++ +DGQ  L F  +   W    P A   K +WE  K+ A     +   DC 
Sbjct: 129 DNSTEGYWKYGYDGQDHLEFCPDTLDWRAAEPRAWPTKLEWERHKIRARQNRAYLERDCP 188

Query: 192 GWLEDFL 198
             L+  L
Sbjct: 189 AQLQQLL 195


>gi|4502337 alpha-2-glycoprotein 1, zinc [Homo sapiens]
          Length = 298

 Score = 62.4 bits (150), Expect = 3e-10
 Identities = 49/191 (25%), Positives = 83/191 (43%), Gaps = 4/191 (2%)

Query: 9   ILLCLPLLLLLSGWSRAGRADPHSLCYDITVIPKFRPGPRWCAVQGQVDEKTFLHYDCGN 68
           +LL L LLLL     +  +   +SL Y  T + K           G +++  F  Y+  +
Sbjct: 7   VLLSL-LLLLGPAVPQENQDGRYSLTYIYTGLSKHVEDVPAFQALGSLNDLQFFRYNSKD 65

Query: 69  KTVTPVSPLGKKLNVTTAWKAQNPVLREVVDILTEQLRDIQLENYTPKEPL-TLQARMSC 127
           +   P+  L +++     WK  + + +   DI  E L+DI +E Y        LQ R  C
Sbjct: 66  RKSQPMG-LWRQVEGMEDWKQDSQLQKAREDIFMETLKDI-VEYYNDSNGSHVLQGRFGC 123

Query: 128 EQKAEGHSSGSWQFSFDGQIFLLFDSEKRMWTTVHPGARKMKEKWENDKVVAMSFHYFSM 187
           E +    S   W++ +DG+ ++ F+ E   W    P A+  K+KWE + V       +  
Sbjct: 124 EIENNRSSGAFWKYYYDGKDYIEFNKEIPAWVPFDPAAQITKQKWEAEPVYVQRAKAYLE 183

Query: 188 GDCIGWLEDFL 198
            +C   L  +L
Sbjct: 184 EECPATLRKYL 194


>gi|17986001 major histocompatibility complex, class I, B precursor
           [Homo sapiens]
          Length = 362

 Score = 58.2 bits (139), Expect = 7e-09
 Identities = 54/213 (25%), Positives = 90/213 (42%), Gaps = 17/213 (7%)

Query: 1   MAAAAATKILLCLPLLLLLSGWSRAGRADPHSLCYDITVIPKFRPG---PRWCAVQGQVD 57
           +  A  T +LL    L L   W     A  HS+ Y  T +   RPG   PR+ +V G VD
Sbjct: 2   LVMAPRTVLLLLSAALALTETW-----AGSHSMRYFYTSVS--RPGRGEPRFISV-GYVD 53

Query: 58  EKTFLHYD--CGNKTVTPVSPLGKKLNVTTAWKAQNPVLREVVDILTEQLRDIQ-LENYT 114
           +  F+ +D    +    P +P  ++      W     + +       E LR+++   N +
Sbjct: 54  DTQFVRFDSDAASPREEPRAPWIEQEG-PEYWDRNTQIYKAQAQTDRESLRNLRGYYNQS 112

Query: 115 PKEPLTLQARMSCEQKAEGHS-SGSWQFSFDGQIFLLFDSEKRMWTTVHPGARKMKEKWE 173
                TLQ+   C+   +G    G  Q+++DG+ ++  + + R WT     A+  + KWE
Sbjct: 113 EAGSHTLQSMYGCDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWE 172

Query: 174 NDKVVAMSFHYFSMGDCIGWLEDFLMGMDSTLE 206
             +       Y   G+C+ WL  +L      LE
Sbjct: 173 AAREAEQRRAYLE-GECVEWLRRYLENGKDKLE 204


>gi|62912479 major histocompatibility complex, class I, E precursor
           [Homo sapiens]
          Length = 358

 Score = 57.0 bits (136), Expect = 1e-08
 Identities = 58/206 (28%), Positives = 89/206 (43%), Gaps = 17/206 (8%)

Query: 7   TKILLCLPLLLLLSGWSRAGRADPHSLCYDITVIPKFRPG---PRWCAVQGQVDEKTFLH 63
           T +LL    L L   W     A  HSL Y  T +   RPG   PR+ +V G VD+  F+ 
Sbjct: 5   TLLLLLSEALALTQTW-----AGSHSLKYFHTSVS--RPGRGEPRFISV-GYVDDTQFVR 56

Query: 64  YD--CGNKTVTPVSPLGKKLNVTTAWKAQNPVLREVVDILTEQLRDIQ-LENYTPKEPLT 120
           +D    +  + P +P  ++   +  W  +    R+   I    LR ++   N +     T
Sbjct: 57  FDNDAASPRMVPRAPWMEQEG-SEYWDRETRSARDTAQIFRVNLRTLRGYYNQSEAGSHT 115

Query: 121 LQARMSCEQKAEGHS-SGSWQFSFDGQIFLLFDSEKRMWTTVHPGARKMKEKWENDKVVA 179
           LQ    CE   +G    G  QF++DG+ +L  + + R WT V   A ++ E+  ND   A
Sbjct: 116 LQWMHGCELGPDGRFLRGYEQFAYDGKDYLTLNEDLRSWTAVDTAA-QISEQKSNDASEA 174

Query: 180 MSFHYFSMGDCIGWLEDFLMGMDSTL 205
                +    C+ WL  +L     TL
Sbjct: 175 EHQRAYLEDTCVEWLHKYLEKGKETL 200


>gi|24797067 major histocompatibility complex, class I, A precursor
           [Homo sapiens]
          Length = 365

 Score = 52.8 bits (125), Expect = 3e-07
 Identities = 54/213 (25%), Positives = 88/213 (41%), Gaps = 38/213 (17%)

Query: 15  LLLLLSGWSRAGR--ADPHSLCYDITVIPKFRPG---PRWCAVQGQVDEKTFLHYDCGNK 69
           LLLLLSG     +  A  HS+ Y  T +   RPG   PR+ AV G VD+  F+ +D    
Sbjct: 9   LLLLLSGALALTQTWAGSHSMRYFFTSVS--RPGRGEPRFIAV-GYVDDTQFVRFDS--- 62

Query: 70  TVTPVSPLGKKLNVTTAWKAQNPVLREVVDILTEQLRDIQLENYTPKEPL---------- 119
                    +++     W  Q     E  +   ++ R+++ ++ T +  L          
Sbjct: 63  -----DAASQRMEPRAPWIEQ-----EGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQS 112

Query: 120 -----TLQARMSCEQKAEGHS-SGSWQFSFDGQIFLLFDSEKRMWTTVHPGARKMKEKWE 173
                T+Q    C+  ++G    G  Q ++DG+ ++  + + R WT     A+  K KWE
Sbjct: 113 EAGSHTIQIMYGCDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWE 172

Query: 174 NDKVVAMSFHYFSMGDCIGWLEDFLMGMDSTLE 206
                     Y   G C+ WL  +L     TL+
Sbjct: 173 AAHEAEQLRAYLD-GTCVEWLRRYLENGKETLQ 204


>gi|21040349 hemochromatosis protein isoform 7 precursor [Homo
           sapiens]
          Length = 260

 Score = 52.0 bits (123), Expect = 5e-07
 Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 4/111 (3%)

Query: 120 TLQARMSCEQKAEGHSSGSWQFSFDGQIFLLFDSEKRMWTTVHPGARKMKEKWENDKVVA 179
           TLQ  + CE + +  + G W++ +DGQ  L F  +   W    P A   K +WE  K+ A
Sbjct: 29  TLQVILGCEMQEDNSTEGYWKYGYDGQDHLEFCPDTLDWRAAEPRAWPTKLEWERHKIRA 88

Query: 180 MSFHYFSMGDCIGWLEDFL-MG---MDSTLEPSAGAPLAMSSGTTQLRATA 226
                +   DC   L+  L +G   +D  + P       ++S  T LR  A
Sbjct: 89  RQNRAYLERDCPAQLQQLLELGRGVLDQQVPPLVKVTHHVTSSVTTLRCRA 139


>gi|209862839 Fc fragment of IgG, receptor, transporter, alpha [Homo
           sapiens]
          Length = 365

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 44/184 (23%), Positives = 73/184 (39%), Gaps = 7/184 (3%)

Query: 15  LLLLLSGWSRAGRADPHSLCYDITVIPKFRPGPRWCAVQGQVDEKTFLHYDCGNKTVTPV 74
           LL LL G    G     SL Y +T +    PG     V G +  + +L Y+       P 
Sbjct: 14  LLFLLPG--SLGAESHLSLLYHLTAVSSPAPGTPAFWVSGWLGPQQYLSYNSLRGEAEPC 71

Query: 75  SPLGKKLNVTTAWKAQNPVLREVVDILTEQLRDIQLENYTPKEPLTLQARMSCEQKAEGH 134
                +  V+  W+ +   LR    +  E  + +       K P TLQ  + CE   +  
Sbjct: 72  GAWVWENQVSWYWEKETTDLRIKEKLFLEAFKALG-----GKGPYTLQGLLGCELGPDNT 126

Query: 135 SSGSWQFSFDGQIFLLFDSEKRMWTTVHPGARKMKEKWENDKVVAMSFHYFSMGDCIGWL 194
           S  + +F+ +G+ F+ FD ++  W    P A  + ++W+     A     F +  C   L
Sbjct: 127 SVPTAKFALNGEEFMNFDLKQGTWGGDWPEALAISQRWQQQDKAANKELTFLLFSCPHRL 186

Query: 195 EDFL 198
            + L
Sbjct: 187 REHL 190


>gi|4758346 Fc fragment of IgG, receptor, transporter, alpha [Homo
           sapiens]
          Length = 365

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 44/184 (23%), Positives = 73/184 (39%), Gaps = 7/184 (3%)

Query: 15  LLLLLSGWSRAGRADPHSLCYDITVIPKFRPGPRWCAVQGQVDEKTFLHYDCGNKTVTPV 74
           LL LL G    G     SL Y +T +    PG     V G +  + +L Y+       P 
Sbjct: 14  LLFLLPG--SLGAESHLSLLYHLTAVSSPAPGTPAFWVSGWLGPQQYLSYNSLRGEAEPC 71

Query: 75  SPLGKKLNVTTAWKAQNPVLREVVDILTEQLRDIQLENYTPKEPLTLQARMSCEQKAEGH 134
                +  V+  W+ +   LR    +  E  + +       K P TLQ  + CE   +  
Sbjct: 72  GAWVWENQVSWYWEKETTDLRIKEKLFLEAFKALG-----GKGPYTLQGLLGCELGPDNT 126

Query: 135 SSGSWQFSFDGQIFLLFDSEKRMWTTVHPGARKMKEKWENDKVVAMSFHYFSMGDCIGWL 194
           S  + +F+ +G+ F+ FD ++  W    P A  + ++W+     A     F +  C   L
Sbjct: 127 SVPTAKFALNGEEFMNFDLKQGTWGGDWPEALAISQRWQQQDKAANKELTFLLFSCPHRL 186

Query: 195 EDFL 198
            + L
Sbjct: 187 REHL 190


>gi|167857788 MHC class I polypeptide-related sequence B [Homo
           sapiens]
          Length = 383

 Score = 49.3 bits (116), Expect = 3e-06
 Identities = 43/180 (23%), Positives = 73/180 (40%), Gaps = 10/180 (5%)

Query: 25  AGRADPHSLCYDITVIPKFRPGPRWCAVQGQVDEKTFLHYDCGNKTVTPVSPLGKKLNVT 84
           A  A+PHSL Y++ V+ +          +G +D + FL YD   +   P     + +   
Sbjct: 20  AAAAEPHSLRYNLMVLSQDGSVQSGFLAEGHLDGQPFLRYDRQKRRAKPQGQWAENVLGA 79

Query: 85  TAWKAQNPVLREVVDILTEQLRDIQLENYTPKEPL-TLQARMSCEQKAEGHSSGSWQFSF 143
             W  +   L E    L   L  I+ +    K  L +LQ    CE   +  + GS  F +
Sbjct: 80  KTWDTETEDLTENGQDLRRTLTHIKDQ----KGGLHSLQEIRVCEIHEDSSTRGSRHFYY 135

Query: 144 DGQIFLLFDSEKRMWTTVHPG-----ARKMKEKWENDKVVAMSFHYFSMGDCIGWLEDFL 198
           DG++FL  + E +  T          A  +   W+ D +   + +     DC+  L+ +L
Sbjct: 136 DGELFLSQNLETQESTVPQSSRAQTLAMNVTNFWKEDAMKTKTHYRAMQADCLQKLQRYL 195


>gi|21040351 hemochromatosis protein isoform 8 precursor [Homo
           sapiens]
          Length = 246

 Score = 48.9 bits (115), Expect = 4e-06
 Identities = 24/79 (30%), Positives = 36/79 (45%)

Query: 120 TLQARMSCEQKAEGHSSGSWQFSFDGQIFLLFDSEKRMWTTVHPGARKMKEKWENDKVVA 179
           TLQ  + CE + +  + G W++ +DGQ  L F  +   W    P A   K +WE  K+ A
Sbjct: 29  TLQVILGCEMQEDNSTEGYWKYGYDGQDHLEFCPDTLDWRAAEPRAWPTKLEWERHKIRA 88

Query: 180 MSFHYFSMGDCIGWLEDFL 198
                +   DC   L+  L
Sbjct: 89  RQNRAYLERDCPAQLQQLL 107


>gi|4504415 major histocompatibility complex, class I, G precursor
           [Homo sapiens]
          Length = 338

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 51/202 (25%), Positives = 84/202 (41%), Gaps = 17/202 (8%)

Query: 4   AAATKILLCLPLLLLLSGWSRAGRADPHSLCYDITVIPKFRPG---PRWCAVQGQVDEKT 60
           A  T  LL    L L   W     A  HS+ Y    +   RPG   PR+ A+ G VD+  
Sbjct: 5   APRTLFLLLSGALTLTETW-----AGSHSMRYFSAAVS--RPGRGEPRFIAM-GYVDDTQ 56

Query: 61  FLHYDCGNKT--VTPVSPLGKKLNVTTAWKAQNPVLREVVDILTEQLRDIQ-LENYTPKE 117
           F+ +D  +    + P +P  ++      W+ +    +         L+ ++   N +   
Sbjct: 57  FVRFDSDSACPRMEPRAPWVEQEG-PEYWEEETRNTKAHAQTDRMNLQTLRGYYNQSEAS 115

Query: 118 PLTLQARMSCEQKAEGHS-SGSWQFSFDGQIFLLFDSEKRMWTTVHPGARKMKEKWENDK 176
             TLQ  + C+  ++G    G  Q+++DG+ +L  + + R WT     A+  K K E   
Sbjct: 116 SHTLQWMIGCDLGSDGRLLRGYEQYAYDGKDYLALNEDLRSWTAADTAAQISKRKCEAAN 175

Query: 177 VVAMSFHYFSMGDCIGWLEDFL 198
           V      Y   G C+ WL  +L
Sbjct: 176 VAEQRRAYLE-GTCVEWLHRYL 196


>gi|149158700 major histocompatibility complex, class I, F isoform 3
           precursor [Homo sapiens]
          Length = 254

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 64/247 (25%), Positives = 103/247 (41%), Gaps = 42/247 (17%)

Query: 15  LLLLLSG-------WSRAGRADPHSLCYDITVIPKFRPG---PRWCAVQGQVDEKTFLHY 64
           LLLLLSG       W     A  HSL Y  T +   RPG   PR+ AV+  VD+  FL +
Sbjct: 6   LLLLLSGALALTDTW-----AGSHSLRYFSTAVS--RPGRGEPRYIAVE-YVDDTQFLRF 57

Query: 65  D--CGNKTVTPVSPLGKKLNV-----TTAWKAQNPVLREVVDILTEQLRDIQLENYTPKE 117
           D       + P  P  ++        TT +   N     V       LR++ L  Y   E
Sbjct: 58  DSDAAIPRMEPREPWVEQEGPQYWEWTTGYAKANAQTDRVA------LRNL-LRRYNQSE 110

Query: 118 P--LTLQARMSCEQKAEGHS-SGSWQFSFDGQIFLLFDSEKRMWTTVHPGARKMKEKWEN 174
               TLQ    C+   +G    G  Q ++DG+ ++  + + R WT     A+  +  +E 
Sbjct: 111 AGSHTLQGMNGCDMGPDGRLLRGYHQHAYDGKDYISLNEDLRSWTAADTVAQITQRFYEA 170

Query: 175 DKVVAMSFHYFSMGDCIGWLEDFLMGMDSTLEPSAGAP------LAMSSGTTQLRATATT 228
           ++  A  F  +  G+C+  L  +L     TL+ +  +P      + + +G   L A  T 
Sbjct: 171 EE-YAEEFRTYLEGECLELLRRYLENGKETLQRAEQSPQPTIPIVGIVAGLVVLGAVVTG 229

Query: 229 LILCCLL 235
            ++  ++
Sbjct: 230 AVVAAVM 236


>gi|52630342 major histocompatibility complex, class I, C precursor
           [Homo sapiens]
          Length = 366

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 53/205 (25%), Positives = 84/205 (40%), Gaps = 22/205 (10%)

Query: 15  LLLLLSGWSRAGR--ADPHSLCYDITVIPKFRPG---PRWCAVQGQVDEKTFLHYDCGNK 69
           LLLLLSG        A  HS+ Y  T +   RPG   PR+ +V G VD+  F+ +D    
Sbjct: 9   LLLLLSGGLALTETWACSHSMRYFDTAVS--RPGRGEPRFISV-GYVDDTQFVRFDSD-- 63

Query: 70  TVTPVSPLGK------KLNVTTAWKAQNPVLREVVDILTEQLRDIQ-LENYTPKEPLTLQ 122
                SP G+      +      W  +    +         LR+++   N +     TLQ
Sbjct: 64  ---AASPRGEPRAPWVEQEGPEYWDRETQKYKRQAQADRVSLRNLRGYYNQSEDGSHTLQ 120

Query: 123 ARMSCEQKAEGHS-SGSWQFSFDGQIFLLFDSEKRMWTTVHPGARKMKEKWENDKVVAMS 181
               C+   +G    G  Q ++DG+ ++  + + R WT     A+  + K E  +  A  
Sbjct: 121 RMSGCDLGPDGRLLRGYDQSAYDGKDYIALNEDLRSWTAADTAAQITQRKLEAAR-AAEQ 179

Query: 182 FHYFSMGDCIGWLEDFLMGMDSTLE 206
              +  G C+ WL  +L     TL+
Sbjct: 180 LRAYLEGTCVEWLRRYLENGKETLQ 204


>gi|149158702 major histocompatibility complex, class I, F isoform 1
           precursor [Homo sapiens]
          Length = 442

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 59/212 (27%), Positives = 89/212 (41%), Gaps = 36/212 (16%)

Query: 15  LLLLLSG-------WSRAGRADPHSLCYDITVIPKFRPG---PRWCAVQGQVDEKTFLHY 64
           LLLLLSG       W     A  HSL Y  T +   RPG   PR+ AV+  VD+  FL +
Sbjct: 6   LLLLLSGALALTDTW-----AGSHSLRYFSTAVS--RPGRGEPRYIAVE-YVDDTQFLRF 57

Query: 65  D--CGNKTVTPVSPLGKKLNV-----TTAWKAQNPVLREVVDILTEQLRDIQLENYTPKE 117
           D       + P  P  ++        TT +   N     V       LR++ L  Y   E
Sbjct: 58  DSDAAIPRMEPREPWVEQEGPQYWEWTTGYAKANAQTDRVA------LRNL-LRRYNQSE 110

Query: 118 P--LTLQARMSCEQKAEGHS-SGSWQFSFDGQIFLLFDSEKRMWTTVHPGARKMKEKWEN 174
               TLQ    C+   +G    G  Q ++DG+ ++  + + R WT     A+  +  +E 
Sbjct: 111 AGSHTLQGMNGCDMGPDGRLLRGYHQHAYDGKDYISLNEDLRSWTAADTVAQITQRFYEA 170

Query: 175 DKVVAMSFHYFSMGDCIGWLEDFLMGMDSTLE 206
           ++  A  F  +  G+C+  L  +L     TL+
Sbjct: 171 EE-YAEEFRTYLEGECLELLRRYLENGKETLQ 201


>gi|149158698 major histocompatibility complex, class I, F isoform 2
           precursor [Homo sapiens]
          Length = 346

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 59/212 (27%), Positives = 89/212 (41%), Gaps = 36/212 (16%)

Query: 15  LLLLLSG-------WSRAGRADPHSLCYDITVIPKFRPG---PRWCAVQGQVDEKTFLHY 64
           LLLLLSG       W     A  HSL Y  T +   RPG   PR+ AV+  VD+  FL +
Sbjct: 6   LLLLLSGALALTDTW-----AGSHSLRYFSTAVS--RPGRGEPRYIAVE-YVDDTQFLRF 57

Query: 65  D--CGNKTVTPVSPLGKKLNV-----TTAWKAQNPVLREVVDILTEQLRDIQLENYTPKE 117
           D       + P  P  ++        TT +   N     V       LR++ L  Y   E
Sbjct: 58  DSDAAIPRMEPREPWVEQEGPQYWEWTTGYAKANAQTDRVA------LRNL-LRRYNQSE 110

Query: 118 P--LTLQARMSCEQKAEGHS-SGSWQFSFDGQIFLLFDSEKRMWTTVHPGARKMKEKWEN 174
               TLQ    C+   +G    G  Q ++DG+ ++  + + R WT     A+  +  +E 
Sbjct: 111 AGSHTLQGMNGCDMGPDGRLLRGYHQHAYDGKDYISLNEDLRSWTAADTVAQITQRFYEA 170

Query: 175 DKVVAMSFHYFSMGDCIGWLEDFLMGMDSTLE 206
           ++  A  F  +  G+C+  L  +L     TL+
Sbjct: 171 EE-YAEEFRTYLEGECLELLRRYLENGKETLQ 201


>gi|89063265 PREDICTED: similar to MHC class I antigen [Homo
           sapiens]
          Length = 366

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 13/183 (7%)

Query: 31  HSLCYDITVIPKFRPG---PRWCAVQGQVDEKTFLHYDC--GNKTVTPVSPLGKKLNVTT 85
           HSL Y  T +   RPG   PR+ +V G VD+  F+ +D    N    P +P  ++     
Sbjct: 40  HSLRYFYTAVS--RPGLGEPRFISV-GYVDDTQFVRFDSDSANPREEPRAPWMEQEG-PE 95

Query: 86  AWKAQNPVLREVVDILTEQLRDIQ-LENYTPKEPLTLQARMSCEQKAEGHS-SGSWQFSF 143
            W  Q  ++++        L  ++   N +     TLQ    C+   +G    G  Q ++
Sbjct: 96  YWDEQTRIVKDTAQSFRVGLNTLRGYYNQSEAGSHTLQLMYGCDVGPDGRFLRGFMQDAY 155

Query: 144 DGQIFLLFDSEKRMWTTVHPGARKMKEKWENDKVVAMSFHYFSMGDCIGWLEDFL-MGMD 202
           DG+ ++  + + R WT     A+  K K E         +Y   G C+  L  +L  G D
Sbjct: 156 DGRDYIALNEDLRSWTAADTAAQITKRKREAAGAAERQRNYLE-GRCVEGLRRYLETGKD 214

Query: 203 STL 205
           + L
Sbjct: 215 ALL 217


>gi|4557751 MHC class I polypeptide-related sequence A [Homo
           sapiens]
          Length = 383

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 47/198 (23%), Positives = 79/198 (39%), Gaps = 20/198 (10%)

Query: 14  PLLLLLSGW----SRAGRADPHSLCYDITVIPKFRPGPRWCAVQGQVDEKTFLHYDCGNK 69
           P+ LLL+G          A+PHSL Y++TV+            +  +D + FL  D    
Sbjct: 5   PVFLLLAGIFPFAPPGAAAEPHSLRYNLTVLSWDGSVQSGFLTEVHLDGQPFLRCDRQKC 64

Query: 70  TVTPVSPLGKKLNVTTAWKAQNPVLREVVDILTEQLRDIQL---ENYTPKEPL-TLQARM 125
              P     + +     W       RE  D LT   +D+++        KE L +LQ   
Sbjct: 65  RAKPQGQWAEDVLGNKTWD------RETRD-LTGNGKDLRMTLAHIKDQKEGLHSLQEIR 117

Query: 126 SCEQKAEGHSSGSWQFSFDGQIFLLFDSEKRMWTTVHPG-----ARKMKEKWENDKVVAM 180
            CE   +  +  S  F +DG++FL  + E + WT          A  ++   + D +   
Sbjct: 118 VCEIHEDNSTRSSQHFYYDGELFLSQNLETKEWTMPQSSRAQTLAMNVRNFLKEDAMKTK 177

Query: 181 SFHYFSMGDCIGWLEDFL 198
           + ++    DC+  L  +L
Sbjct: 178 THYHAMHADCLQELRRYL 195


>gi|4502599 carbonyl reductase 1 [Homo sapiens]
          Length = 277

 Score = 32.0 bits (71), Expect = 0.51
 Identities = 38/162 (23%), Positives = 66/162 (40%), Gaps = 20/162 (12%)

Query: 52  VQGQVDEKT--FLHYDCGNKTVTPVSPLGKKLNVTTAWKAQNPVLREVVDILTEQLRDIQ 109
           +Q +V  KT  F   D   + +  + P G+ +NV++    +   L+     L ++ R   
Sbjct: 105 IQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVR--ALKSCSPELQQKFRS-- 160

Query: 110 LENYTPKEPLTLQARMSCEQKAEGHSSGSWQFSFDGQIFLLFDSEKRMWTTVHPGARKMK 169
            E  T +E + L  +   + K   H    W  S  G   +      R    +H  ARK+ 
Sbjct: 161 -ETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSR----IH--ARKLS 213

Query: 170 EKWENDKVVAMSFHYFSMGDCIGWLEDFLMGMDSTLEPSAGA 211
           E+ + DK++  +        C GW+   + G  +T  P  GA
Sbjct: 214 EQRKGDKILLNAC-------CPGWVRTDMAGPKATKSPEEGA 248


>gi|51871374 UTP14, U3 small nucleolar ribonucleoprotein, homolog C
           [Homo sapiens]
          Length = 766

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 8/63 (12%)

Query: 74  VSPLGKKL-------NVTTAWKAQNPVLREVVDILTEQLRDIQLENYTPKEPLTLQARMS 126
           V PLGK+        +  + WKA+ P+ +E+ ++L +  + +     TP E  +LQA MS
Sbjct: 157 VFPLGKEQPAIAPIEHALSGWKARTPLEQEIFNLLHKNKQPVTDPLLTPMEKASLQA-MS 215

Query: 127 CEQ 129
            E+
Sbjct: 216 LEE 218


>gi|156151443 alpha-kinase 1 [Homo sapiens]
          Length = 1244

 Score = 30.4 bits (67), Expect = 1.5
 Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 15/73 (20%)

Query: 41  PKFRPGPRWCAVQGQVDEKT---------FLHYDCGNKTVTPVSPLGKKLNVTTAWKAQN 91
           P F+  P W   +G+  E T          LH   GN ++ P S      + T  W  QN
Sbjct: 776 PTFKASPSWVDPEGETAESTEDAPLDFHRVLHNSLGNISMLPCS------SFTPNWPVQN 829

Query: 92  PVLREVVDILTEQ 104
           P  R+    + EQ
Sbjct: 830 PDSRKSGGPVAEQ 842


>gi|156151441 alpha-kinase 1 [Homo sapiens]
          Length = 1244

 Score = 30.4 bits (67), Expect = 1.5
 Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 15/73 (20%)

Query: 41  PKFRPGPRWCAVQGQVDEKT---------FLHYDCGNKTVTPVSPLGKKLNVTTAWKAQN 91
           P F+  P W   +G+  E T          LH   GN ++ P S      + T  W  QN
Sbjct: 776 PTFKASPSWVDPEGETAESTEDAPLDFHRVLHNSLGNISMLPCS------SFTPNWPVQN 829

Query: 92  PVLREVVDILTEQ 104
           P  R+    + EQ
Sbjct: 830 PDSRKSGGPVAEQ 842


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.136    0.436 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,176,521
Number of Sequences: 37866
Number of extensions: 449572
Number of successful extensions: 1066
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1029
Number of HSP's gapped (non-prelim): 39
length of query: 246
length of database: 18,247,518
effective HSP length: 100
effective length of query: 146
effective length of database: 14,460,918
effective search space: 2111294028
effective search space used: 2111294028
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.