Guide to the Human Genome
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Name: CBR1 Sequence: fasta or formatted (277aa) NCBI GI: 4502599
Description:

carbonyl reductase 1

Referenced in:

Alcohol and Aldehyde Dehydrogenases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         20           2
 C cysteine            1.8          5           2
 D aspartate           5.1         14           2
 E glutamate           6.5         18           3
 F phenylalanine       3.6         10           2
 G glycine             8.7         24           2
 H histidine           2.2          6           1
 I isoleucine          4.7         13           1
 K lysine              6.5         18           2
 L leucine             9.7         27           2
 M methionine          1.8          5           1
 N asparagine          2.5          7           2
 P proline             5.1         14           2
 Q glutamine           5.1         14           2
 R arginine            6.1         17           1
 S serine              6.1         17           2
 T threonine           5.8         16           1
 V valine              9.4         26           2
 W tryptophan          1.1          3           1
 Y tyrosine            1.1          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   carbonyl reductase 1 
CBR3                  0.720   carbonyl reductase 3 
RDH14                 0.070   retinol dehydrogenase 14 (all-trans and 9-cis) [Homo...
DHRSX                 0.066   dehydrogenase/reductase (SDR family) X-linked [Homo...
RDH13                 0.064   retinol dehydrogenase 13 isoform 1 
DHRS13                0.062   dehydrogenase/reductase (SDR family) member 13 [Hom...
RDH12                 0.059   retinol dehydrogenase 12 
RDH11                 0.057   retinol dehydrogenase 11 
HSD17B14              0.055   dehydrogenase/reductase (SDR family) member 10 [Homo...
DHRS11                0.055   short-chain dehydrogenase/reductase 
DHRS9                 0.045   NADP-dependent retinol dehydrogenase/reductase [Homo...
DHRS9                 0.045   NADP-dependent retinol dehydrogenase/reductase [Hom...
DHRS9                 0.045   NADP-dependent retinol dehydrogenase/reductase [Hom...
DHRS9                 0.045   NADP-dependent retinol dehydrogenase/reductase [Homo...
PECR                  0.045   peroxisomal trans-2-enoyl-CoA reductase 
RDH16                 0.045   retinol dehydrogenase 16 
HSD17B2               0.043   hydroxysteroid (17-beta) dehydrogenase 2 
HSD17B6               0.043   hydroxysteroid (17-beta) dehydrogenase 6 
BDH1                  0.042   3-hydroxybutyrate dehydrogenase, type 1 precursor [H...
BDH1                  0.042   3-hydroxybutyrate dehydrogenase, type 1 precursor [H...
BDH1                  0.042   3-hydroxybutyrate dehydrogenase, type 1 precursor [H...
DHRS7B                0.042   dehydrogenase/reductase (SDR family) member 7B [Homo...
DHRS7                 0.042   dehydrogenase/reductase (SDR family) member 7 
DHRS3                 0.040   dehydrogenase/reductase (SDR family) member 3 
DHRS4                 0.040   peroxisomal short-chain alcohol dehydrogenase 
RDH8                  0.040   retinol dehydrogenase 8 (all-trans) 
DHRS4L2               0.040   dehydrogenase/reductase (SDR family) member 4 like ...
DHRS2                 0.038   dehydrogenase/reductase member 2 isoform 2 
DHRS2                 0.038   dehydrogenase/reductase member 2 isoform 1 
RDH5                  0.036   retinol dehydrogenase 5 (11-cis and 9-cis) 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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