Guide to the Human Genome
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Name: ALPK1 Sequence: fasta or formatted (1244aa) NCBI GI: 156151441
Description:

alpha-kinase 1

Referenced in:

Additional Serine / Threonine Protein Kinases

Other entries for this name:
alt mRNA [1244aa] alpha-kinase 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         74           5
 C cysteine            2.0         25           1
 D aspartate           5.0         62           2
 E glutamate           7.6         95           2
 F phenylalanine       3.5         43           2
 G glycine             6.4         80           2
 H histidine           3.2         40           2
 I isoleucine          4.0         50           2
 K lysine              5.9         74           3
 L leucine             9.9        123           3
 M methionine          1.4         17           1
 N asparagine          4.8         60           2
 P proline             4.8         60           2
 Q glutamine           5.6         70           3
 R arginine            4.4         55           2
 S serine              9.9        123           5
 T threonine           5.3         66           3
 V valine              6.1         76           3
 W tryptophan          1.6         20           2
 Y tyrosine            2.5         31           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   alpha-kinase 1 
ALPK1                 1.000   alpha-kinase 1 
EEF2K                 0.020   elongation factor-2 kinase 
TRPM6                 0.012   transient receptor potential cation channel, subfami...
TRPM7                 0.012   transient receptor potential cation channel, subfam...
MLLT3                 0.004   myeloid/lymphoid or mixed-lineage leukemia (trithor...
FAM63B                0.004   hypothetical protein LOC54629 isoform a 
ZNF831                0.004   zinc finger protein 831 
FAM63B                0.004   hypothetical protein LOC54629 isoform b 
C3orf36               0.004   hypothetical protein LOC80111 
GOLIM4                0.003   golgi integral membrane protein 4 
BARHL2                0.003   BarH-like homeobox 2 
MLLT1                 0.003   myeloid/lymphoid or mixed-lineage leukemia (trithora...
TJP1                  0.003   tight junction protein 1 isoform b 
TJP1                  0.003   tight junction protein 1 isoform a 
SPTLC2                0.003   serine palmitoyltransferase, long chain base subunit ...
DSPP                  0.003   dentin sialophosphoprotein preproprotein 
ZBTB7C                0.003   zinc finger and BTB domain containing 7C 
ZFYVE20               0.003   FYVE-finger-containing Rab5 effector protein rabenos...
AVL9                  0.003   AVL9 homolog (S. cerevisiase) 
MUC21                 0.003   mucin 21 
MDN1                  0.003   MDN1, midasin homolog 
RAET1G                0.003   retinoic acid early transcript 1G 
MED26                 0.003   mediator complex subunit 26 
CCDC55                0.003   coiled-coil domain containing 55 isoform 1 
RAET1L                0.003   retinoic acid early transcript 1L 
LDB3                  0.002   LIM domain binding 3 isoform 3 
LDB3                  0.002   LIM domain binding 3 isoform 1 
TSHZ1                 0.002   teashirt family zinc finger 1 
VEGFB                 0.002   vascular endothelial growth factor B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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