Guide to the Human Genome
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Name: TRPM7 Sequence: fasta or formatted (1865aa) NCBI GI: 148612863
Description:

transient receptor potential cation channel, subfamily M, member 7

Referenced in:

Calcium and TRP Cation Channels
Additional Serine / Threonine Protein Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4        101           2
 C cysteine            2.0         37           2
 D aspartate           4.6         85           2
 E glutamate           6.6        124           2
 F phenylalanine       4.6         85           2
 G glycine             5.1         96           3
 H histidine           2.9         54           2
 I isoleucine          6.4        120           2
 K lysine              6.9        129           3
 L leucine             9.9        185           3
 M methionine          2.9         54           2
 N asparagine          4.9         92           4
 P proline             4.8         90           3
 Q glutamine           4.6         85           3
 R arginine            4.7         87           2
 S serine              7.1        133           3
 T threonine           5.1         96           2
 V valine              6.6        123           3
 W tryptophan          1.5         28           1
 Y tyrosine            3.3         61           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transient receptor potential cation channel, subfam... 
TRPM6                 0.393   transient receptor potential cation channel, subfami...
TRPM3                 0.383   transient receptor potential cation channel, subfam...
TRPM3                 0.358   transient receptor potential cation channel, subfam...
TRPM3                 0.358   transient receptor potential cation channel, subfam...
TRPM3                 0.356   transient receptor potential cation channel, subfam...
TRPM3                 0.355   transient receptor potential cation channel, subfam...
TRPM3                 0.354   transient receptor potential cation channel, subfam...
TRPM3                 0.354   transient receptor potential cation channel, subfam...
TRPM1                 0.305   transient receptor potential cation channel, subfami...
TRPM2                 0.128   transient receptor potential cation channel, subfamil...
TRPM5                 0.105   transient receptor potential cation channel, subfami...
TRPM3                 0.090   transient receptor potential cation channel, subfami...
TRPM3                 0.086   transient receptor potential cation channel, subfami...
TRPM4                 0.061   transient receptor potential cation channel, subfami...
TRPM8                 0.057   transient receptor potential cation channel, subfam...
TRPC4                 0.016   transient receptor potential cation channel, subfam...
TRPC4                 0.016   transient receptor potential cation channel, subfam...
TRPC4                 0.016   transient receptor potential cation channel, subfam...
TRPC4                 0.016   transient receptor potential cation channel, subfamil...
TRPC4                 0.016   transient receptor potential cation channel, subfam...
TRPC5                 0.013   transient receptor potential cation channel, subfamil...
ALPK2                 0.012   heart alpha-kinase 
TRPC4                 0.011   transient receptor potential cation channel, subfam...
EEF2K                 0.010   elongation factor-2 kinase 
TRPC6                 0.010   transient receptor potential cation channel, subfamil...
TRPC7                 0.010   transient receptor potential cation channel, subfamil...
TRPC3                 0.009   transient receptor potential cation channel, subfam...
TRPC3                 0.009   transient receptor potential cation channel, subfamil...
ALPK1                 0.008   alpha-kinase 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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