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Name: TRPM3 Sequence: fasta or formatted (1554aa) NCBI GI: 154091320
Description:

transient receptor potential cation channel, subfamily M, member 3 isoform a

Referenced in:

Calcium and TRP Cation Channels

Other entries for this name:
alt prot [1579aa] transient receptor potential cation channel, subfamily M, member ...
alt prot [1569aa] transient receptor potential cation channel, subfamily M, member ...
alt prot [1566aa] transient receptor potential cation channel, subfamily M, member ...
alt prot [1707aa] transient receptor potential cation channel, subfamily M, member ...
alt prot [1556aa] transient receptor potential cation channel, subfamily M, member ...
alt prot [1544aa] transient receptor potential cation channel, subfamily M, member ...
alt prot [230aa] transient receptor potential cation channel, subfamily M, member ...
alt prot [255aa] transient receptor potential cation channel, subfamily M, member ...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         94           2
 C cysteine            1.5         23           2
 D aspartate           5.4         84           2
 E glutamate           7.3        114           3
 F phenylalanine       4.0         62           2
 G glycine             5.0         77           2
 H histidine           2.6         40           1
 I isoleucine          6.8        106           2
 K lysine              5.9         91           3
 L leucine            10.0        155           3
 M methionine          3.9         60           2
 N asparagine          4.0         62           2
 P proline             5.1         80           3
 Q glutamine           3.7         57           2
 R arginine            6.1         95           2
 S serine              7.9        123           3
 T threonine           4.9         76           2
 V valine              5.4         84           3
 W tryptophan          1.4         21           1
 Y tyrosine            3.2         50           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transient receptor potential cation channel, subfam... 
TRPM3                 1.000   transient receptor potential cation channel, subfam...
TRPM3                 0.997   transient receptor potential cation channel, subfam...
TRPM3                 0.995   transient receptor potential cation channel, subfam...
TRPM3                 0.991   transient receptor potential cation channel, subfam...
TRPM3                 0.988   transient receptor potential cation channel, subfam...
TRPM3                 0.987   transient receptor potential cation channel, subfam...
TRPM7                 0.434   transient receptor potential cation channel, subfam...
TRPM6                 0.401   transient receptor potential cation channel, subfami...
TRPM1                 0.391   transient receptor potential cation channel, subfami...
TRPM2                 0.162   transient receptor potential cation channel, subfamil...
TRPM4                 0.145   transient receptor potential cation channel, subfami...
TRPM5                 0.142   transient receptor potential cation channel, subfami...
TRPM3                 0.142   transient receptor potential cation channel, subfami...
TRPM3                 0.137   transient receptor potential cation channel, subfami...
TRPM8                 0.083   transient receptor potential cation channel, subfam...
TRPC4                 0.018   transient receptor potential cation channel, subfam...
TRPC4                 0.018   transient receptor potential cation channel, subfam...
TRPC4                 0.018   transient receptor potential cation channel, subfam...
TRPC4                 0.018   transient receptor potential cation channel, subfamil...
TRPC4                 0.017   transient receptor potential cation channel, subfam...
TRPC5                 0.015   transient receptor potential cation channel, subfamil...
TRPC4                 0.012   transient receptor potential cation channel, subfam...
TRPC7                 0.010   transient receptor potential cation channel, subfamil...
TRPC3                 0.010   transient receptor potential cation channel, subfam...
TRPC3                 0.010   transient receptor potential cation channel, subfamil...
TRPC6                 0.009   transient receptor potential cation channel, subfamil...
TRPV6                 0.009   transient receptor potential cation channel, subfami...
TRPV5                 0.008   transient receptor potential cation channel, subfami...
TRPC1                 0.007   transient receptor potential cation channel, subfamil...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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