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Search of human proteins with 4502071
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4502071 amelogenin (X chromosome) isoform 1 precursor [Homo
sapiens]
(191 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4502071 amelogenin (X chromosome) isoform 1 precursor [Homo s... 431 e-121
gi|33356556 amelogenin (X chromosome) isoform 3 precursor [Homo ... 421 e-118
gi|33356558 amelogenin (X chromosome) isoform 2 precursor [Homo ... 382 e-107
gi|4502073 amelogenin, Y-linked precursor [Homo sapiens] 376 e-105
gi|151301053 RNA binding motif protein 33 [Homo sapiens] 79 2e-15
gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Ho... 74 6e-14
gi|117938768 GNAS complex locus alex [Homo sapiens] 62 2e-10
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 60 9e-10
gi|50345997 E1A binding protein p300 [Homo sapiens] 60 1e-09
gi|19923345 RNA binding motif protein 12 [Homo sapiens] 59 3e-09
gi|23510462 RNA binding motif protein 12 [Homo sapiens] 59 3e-09
gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens] 59 3e-09
gi|195232763 ADAM metallopeptidase domain 29 preproprotein [Homo... 59 3e-09
gi|195232761 ADAM metallopeptidase domain 29 preproprotein [Homo... 59 3e-09
gi|195232759 ADAM metallopeptidase domain 29 preproprotein [Homo... 59 3e-09
gi|73765552 ADAM metallopeptidase domain 29 preproprotein [Homo ... 59 3e-09
gi|153792074 proline rich 12 [Homo sapiens] 59 3e-09
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 57 7e-09
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 57 7e-09
gi|114431236 zinc finger protein 462 [Homo sapiens] 55 4e-08
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 55 5e-08
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 55 5e-08
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 54 6e-08
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 54 6e-08
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 54 6e-08
gi|146134388 YLP motif containing 1 [Homo sapiens] 54 6e-08
gi|150417989 cyclin K isoform 1 [Homo sapiens] 54 8e-08
gi|5174545 myocyte enhancer factor 2D [Homo sapiens] 53 2e-07
gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens] 53 2e-07
gi|210032580 SET domain containing 1B [Homo sapiens] 52 2e-07
>gi|4502071 amelogenin (X chromosome) isoform 1 precursor [Homo
sapiens]
Length = 191
Score = 431 bits (1108), Expect = e-121
Identities = 191/191 (100%), Positives = 191/191 (100%)
Query: 1 MGTWILFACLLGAAFAMPLPPHPGHPGYINFSYEVLTPLKWYQSIRPPYPSYGYEPMGGW 60
MGTWILFACLLGAAFAMPLPPHPGHPGYINFSYEVLTPLKWYQSIRPPYPSYGYEPMGGW
Sbjct: 1 MGTWILFACLLGAAFAMPLPPHPGHPGYINFSYEVLTPLKWYQSIRPPYPSYGYEPMGGW 60
Query: 61 LHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLP 120
LHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLP
Sbjct: 61 LHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLP 120
Query: 121 PPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPPMLPDLTLEAWP 180
PPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPPMLPDLTLEAWP
Sbjct: 121 PPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPPMLPDLTLEAWP 180
Query: 181 STDKTKREEVD 191
STDKTKREEVD
Sbjct: 181 STDKTKREEVD 191
>gi|33356556 amelogenin (X chromosome) isoform 3 precursor [Homo
sapiens]
Length = 205
Score = 421 bits (1083), Expect = e-118
Identities = 191/205 (93%), Positives = 191/205 (93%), Gaps = 14/205 (6%)
Query: 1 MGTWILFACLLGAAFAMPLPPHPGHPGYINFSYE--------------VLTPLKWYQSIR 46
MGTWILFACLLGAAFAMPLPPHPGHPGYINFSYE VLTPLKWYQSIR
Sbjct: 1 MGTWILFACLLGAAFAMPLPPHPGHPGYINFSYENSHSQAINVDRTALVLTPLKWYQSIR 60
Query: 47 PPYPSYGYEPMGGWLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQ 106
PPYPSYGYEPMGGWLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQ
Sbjct: 61 PPYPSYGYEPMGGWLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQ 120
Query: 107 HSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQP 166
HSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQP
Sbjct: 121 HSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQP 180
Query: 167 LPPMLPDLTLEAWPSTDKTKREEVD 191
LPPMLPDLTLEAWPSTDKTKREEVD
Sbjct: 181 LPPMLPDLTLEAWPSTDKTKREEVD 205
>gi|33356558 amelogenin (X chromosome) isoform 2 precursor [Homo
sapiens]
Length = 175
Score = 382 bits (982), Expect = e-107
Identities = 175/191 (91%), Positives = 175/191 (91%), Gaps = 16/191 (8%)
Query: 1 MGTWILFACLLGAAFAMPLPPHPGHPGYINFSYEVLTPLKWYQSIRPPYPSYGYEPMGGW 60
MGTWILFACLLGAAFAMP VLTPLKWYQSIRPPYPSYGYEPMGGW
Sbjct: 1 MGTWILFACLLGAAFAMP----------------VLTPLKWYQSIRPPYPSYGYEPMGGW 44
Query: 61 LHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLP 120
LHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLP
Sbjct: 45 LHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLP 104
Query: 121 PPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPPMLPDLTLEAWP 180
PPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPPMLPDLTLEAWP
Sbjct: 105 PPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPPMLPDLTLEAWP 164
Query: 181 STDKTKREEVD 191
STDKTKREEVD
Sbjct: 165 STDKTKREEVD 175
>gi|4502073 amelogenin, Y-linked precursor [Homo sapiens]
Length = 192
Score = 376 bits (966), Expect = e-105
Identities = 169/192 (88%), Positives = 179/192 (93%), Gaps = 1/192 (0%)
Query: 1 MGTWILFACLLGAAFAMPLPPHPGHPGYINFSYEVLTPLKWYQS-IRPPYPSYGYEPMGG 59
MGTWILFACL+GAAFAMPLPPHPGHPGYINFSYEVLTPLKWYQS IRPPY SYGYEPMGG
Sbjct: 1 MGTWILFACLVGAAFAMPLPPHPGHPGYINFSYEVLTPLKWYQSMIRPPYSSYGYEPMGG 60
Query: 60 WLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNL 119
WLHHQIIPV+SQQHP THTLQ HHHIPVVPAQQP + QQ +MPVPGQ SMTP QHHQPNL
Sbjct: 61 WLHHQIIPVVSQQHPLTHTLQSHHHIPVVPAQQPRVRQQALMPVPGQQSMTPTQHHQPNL 120
Query: 120 PPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPPMLPDLTLEAW 179
P PAQQP+QPQPVQPQPHQPMQPQPPV PMQPL PQPPLPPMFP++PLPP+LPDL LEAW
Sbjct: 121 PLPAQQPFQPQPVQPQPHQPMQPQPPVQPMQPLLPQPPLPPMFPLRPLPPILPDLHLEAW 180
Query: 180 PSTDKTKREEVD 191
P+TDKTK+EEVD
Sbjct: 181 PATDKTKQEEVD 192
>gi|151301053 RNA binding motif protein 33 [Homo sapiens]
Length = 1170
Score = 79.0 bits (193), Expect = 2e-15
Identities = 57/163 (34%), Positives = 73/163 (44%), Gaps = 28/163 (17%)
Query: 20 PPHPGHPGYINFSYEVLT--PLKWYQSIRPPYPSYGYEPMGGWLHHQIIPVLSQQHPPTH 77
PP P P +N S+ V T PL + Q P P++ + PV ++ P
Sbjct: 483 PPPPPPPTLLNSSHPVPTQSPLPFTQ----PGPAFNQQGQQ--------PVFPRERPVRP 530
Query: 78 TLQPHHHIPVVPAQQP--------VIPQQPMMPVPGQHSMTPIQHHQPNLP----PPAQQ 125
LQP + ++ QP + P+QP +P PGQ + H QPNL PP
Sbjct: 531 ALQPPGPVGILHFSQPGSATTRPFIPPRQPFLPGPGQPFLPT--HTQPNLQGPLHPPLPP 588
Query: 126 PYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLP 168
P+QPQP QPQ P Q QPP P PPQ PP P Q P
Sbjct: 589 PHQPQPQQPQQQPPPQHQPPHQPPHQPPPQHQPPPQHPPQHPP 631
Score = 52.4 bits (124), Expect = 2e-07
Identities = 40/107 (37%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 66 IPVLSQQHPPTHT---LQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPP 122
+P Q PTHT LQ H P+ P QP PQQP P QH P+ PP
Sbjct: 562 LPGPGQPFLPTHTQPNLQGPLHPPLPPPHQPQ-PQQPQQ-------QPPPQHQPPHQPPH 613
Query: 123 AQQP-YQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLP 168
P +QP P P H P H +PP PPL PM Q P
Sbjct: 614 QPPPQHQPPPQHPPQHPPQHQHHHHHHHLSVPP-PPLMPMSQPQFRP 659
Score = 50.8 bits (120), Expect = 7e-07
Identities = 34/95 (35%), Positives = 42/95 (44%), Gaps = 27/95 (28%)
Query: 83 HHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQP----YQPQPVQP---- 134
H ++P Q PV+PQ P P PPP QQP +QPQP+QP
Sbjct: 304 HRPALLPTQPPVVPQAP----------------PPPPPPPQQQPIRSLFQPQPLQPLLPV 347
Query: 135 -QPHQPMQPQPPVHPMQPLPPQPPL--PPMFPMQP 166
PH P PQ P Q P+ + PP+ P QP
Sbjct: 348 QHPHHPSPPQGMHMPPQLETPRMMMTPPPVTPQQP 382
Score = 45.8 bits (107), Expect = 2e-05
Identities = 41/145 (28%), Positives = 58/145 (40%), Gaps = 25/145 (17%)
Query: 43 QSIRPPYPSYGYEPMGGWLHHQII-PVLSQQHPPTHTLQPHHHIP-------VVPAQQPV 94
Q+ PP P +P+ Q + P+L QHP + H+P ++ PV
Sbjct: 318 QAPPPPPPPPQQQPIRSLFQPQPLQPLLPVQHPHHPSPPQGMHMPPQLETPRMMMTPPPV 377
Query: 95 IPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQP-----HQPMQPQPPVHPM 149
PQQP ++ H + + P Q P P P QP+P P P+ P H
Sbjct: 378 TPQQPK-------NIHINPHFKGTVVTPVQVPLLPVPSQPRPAVGPQRFPGPPEFPQHTP 430
Query: 150 QPLPPQPPLPPMFPMQ-----PLPP 169
P+P PP P+Q P PP
Sbjct: 431 GPVPNSFSQPPRLPLQDQWRAPPPP 455
Score = 40.8 bits (94), Expect = 7e-04
Identities = 25/58 (43%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 112 IQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPP 169
++ H+P L P Q P PQ P P P Q QP QP P QP LP P P PP
Sbjct: 301 MKDHRPALLP-TQPPVVPQAPPPPPPPPQQ-QPIRSLFQPQPLQPLLPVQHPHHPSPP 356
Score = 40.4 bits (93), Expect = 0.001
Identities = 28/104 (26%), Positives = 38/104 (36%), Gaps = 7/104 (6%)
Query: 63 HQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPP 122
HQ P QHPP H HHH +P P+MP+ +Q QP
Sbjct: 619 HQPPPQHPPQHPPQHQHHHHHH-------HLSVPPPPLMPMSQPQFRPHVQTAQPQASSS 671
Query: 123 AQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQP 166
Q Q Q ++ + P+ MQP P+ P+ P
Sbjct: 672 RMQCPQRQGLRHNTTSQNVSKRPMQQMQPTAPRNSNLRELPIAP 715
Score = 39.7 bits (91), Expect = 0.002
Identities = 53/201 (26%), Positives = 72/201 (35%), Gaps = 46/201 (22%)
Query: 18 PLPPHPGHPGYINFSYEVLTPLKWYQSIRPPYPSYGYEPMGGWLHHQII---PVLSQQHP 74
P PP P F + L PL Q P P G +++ P ++ Q P
Sbjct: 323 PPPPPQQQPIRSLFQPQPLQPLLPVQHPHHPSPPQGMHMPPQLETPRMMMTPPPVTPQQP 382
Query: 75 PTHTLQPHHHIPVV-PAQQPV--IPQQPMMPV-----PG-----QHSMTPIQHH------ 115
+ PH VV P Q P+ +P QP V PG QH+ P+ +
Sbjct: 383 KNIHINPHFKGTVVTPVQVPLLPVPSQPRPAVGPQRFPGPPEFPQHTPGPVPNSFSQPPR 442
Query: 116 -----QPNLPPPAQ-----------QPYQPQPVQPQPHQPMQPQPP---VHPMQPLPPQP 156
Q PPP Q +P P + + P P PP ++ P+P Q
Sbjct: 443 LPLQDQWRAPPPPQDRDPFFLGVSGEPRFPSHLFLEQRSPPPPPPPPTLLNSSHPVPTQS 502
Query: 157 PLP-----PMFPMQPLPPMLP 172
PLP P F Q P+ P
Sbjct: 503 PLPFTQPGPAFNQQGQQPVFP 523
Score = 38.5 bits (88), Expect = 0.004
Identities = 28/70 (40%), Positives = 32/70 (45%), Gaps = 15/70 (21%)
Query: 116 QPNLPPPAQQPYQPQP--------VQPQPHQPMQP-QPPVHPMQP----LPPQPPLPPMF 162
QP + P A P P P QPQP QP+ P Q P HP P +PPQ P M
Sbjct: 312 QPPVVPQAPPPPPPPPQQQPIRSLFQPQPLQPLLPVQHPHHPSPPQGMHMPPQLETPRM- 370
Query: 163 PMQPLPPMLP 172
M PP+ P
Sbjct: 371 -MMTPPPVTP 379
Score = 36.6 bits (83), Expect = 0.014
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 7/43 (16%)
Query: 137 HQP--MQPQPPVHPMQPLPPQPP-----LPPMFPMQPLPPMLP 172
H+P + QPPV P P PP PP + +F QPL P+LP
Sbjct: 304 HRPALLPTQPPVVPQAPPPPPPPPQQQPIRSLFQPQPLQPLLP 346
Score = 28.5 bits (62), Expect = 3.7
Identities = 29/130 (22%), Positives = 46/130 (35%), Gaps = 25/130 (19%)
Query: 64 QIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQ----QPMMPVPGQH------------ 107
+++ L+QQ + P P +Q + P P++P PG
Sbjct: 822 ELLERLAQQQQQLYAPPP----PAEQEEQALSPSPTNGNPLLPFPGAQVRQNVKNRLLVK 877
Query: 108 ----SMTPIQHHQPN-LPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMF 162
S++ +Q N +P A YQ Q ++ H P QPL P+ P
Sbjct: 878 NQDVSISNVQPKTSNFVPSSANMQYQGQQMKALKHLRQTRTVPQSQTQPLHKVLPIKPAD 937
Query: 163 PMQPLPPMLP 172
+P P P
Sbjct: 938 VEEPAVPQTP 947
>gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Homo
sapiens]
Length = 406
Score = 74.3 bits (181), Expect = 6e-14
Identities = 56/156 (35%), Positives = 67/156 (42%), Gaps = 28/156 (17%)
Query: 17 MPLPPHPGHPGYINFSYEVLTPLKWYQSIRPPYPSYGYEPMGGWLHHQIIPVLSQQHPPT 76
+P+PP P P + P+ I P P P ++ PV PP
Sbjct: 247 LPVPPMPPRPPMV--------PMPPRPPIAPMPPMAPVPPGS-----RMAPV-----PPG 288
Query: 77 HTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQP 136
+ P +P P PV P PM PVP M P+ P PP A+ P P + P
Sbjct: 289 PRMAP---VPPWPPMAPVPPWPPMAPVPTGPPMAPV----PPGPPMARVPPGPPMARVPP 341
Query: 137 HQPMQPQPPVHPMQPLPPQP---PLPPMFPMQPLPP 169
PM P PP PM PLPP P PLPP PM PLPP
Sbjct: 342 GPPMAPLPPGPPMAPLPPGPPMAPLPPGPPMAPLPP 377
Score = 67.8 bits (164), Expect = 5e-12
Identities = 44/115 (38%), Positives = 48/115 (41%), Gaps = 8/115 (6%)
Query: 74 PPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQ 133
PP + P I +P PV P M PVP M P+ P P P P P P
Sbjct: 256 PPMVPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPRMAPVPPWPPMAPVPPWPPMAPVPTG 315
Query: 134 PQ-----PHQPMQPQPPVHPMQPLPPQPP---LPPMFPMQPLPPMLPDLTLEAWP 180
P P PM PP PM +PP PP LPP PM PLPP P L P
Sbjct: 316 PPMAPVPPGPPMARVPPGPPMARVPPGPPMAPLPPGPPMAPLPPGPPMAPLPPGP 370
Score = 63.5 bits (153), Expect = 1e-10
Identities = 42/130 (32%), Positives = 51/130 (39%), Gaps = 28/130 (21%)
Query: 67 PVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQP------------------MMPVPGQHS 108
P L P P +P +P + P++P P M PVP
Sbjct: 231 PALCVHLVPQLPRPPVLPVPPMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAPVPPGPR 290
Query: 109 MTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPL------PPMF 162
M P+ P P P P P P P PM P PP PM +PP PP+ PPM
Sbjct: 291 MAPVPPWPPMAPVPPWPPMAPVPTGP----PMAPVPPGPPMARVPPGPPMARVPPGPPMA 346
Query: 163 PMQPLPPMLP 172
P+ P PPM P
Sbjct: 347 PLPPGPPMAP 356
Score = 53.5 bits (127), Expect = 1e-07
Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 25/91 (27%)
Query: 93 PVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQP- 151
P +P+ P++PVP P P + P P P +P P+ P PP+ P+ P
Sbjct: 239 PQLPRPPVLPVP---------------PMPPRPPMVPMPPRP----PIAPMPPMAPVPPG 279
Query: 152 --LPPQPPLPPMFPMQPLPPMLPDLTLEAWP 180
+ P PP P M P+ P PPM P + WP
Sbjct: 280 SRMAPVPPGPRMAPVPPWPPMAP---VPPWP 307
Score = 51.2 bits (121), Expect = 5e-07
Identities = 25/53 (47%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 117 PNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPP 169
P L P PQ +P P P+ P PP PM P+PP+PP+ PM PM P+PP
Sbjct: 227 PALDPALCVHLVPQLPRP-PVLPVPPMPPRPPMVPMPPRPPIAPMPPMAPVPP 278
Score = 28.1 bits (61), Expect = 4.8
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 7/52 (13%)
Query: 113 QHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLP-------PQPP 157
Q +P L P QQ +P ++ + Q PQ V QP PQPP
Sbjct: 85 QQEEPPLTKPEQQQEEPPLLELKQEQEEPPQTTVEGPQPAEGPQTAEGPQPP 136
>gi|117938768 GNAS complex locus alex [Homo sapiens]
Length = 626
Score = 62.4 bits (150), Expect = 2e-10
Identities = 52/151 (34%), Positives = 69/151 (45%), Gaps = 36/151 (23%)
Query: 40 KWYQSIRP----PYPSYGYEPMGGWLHHQIIPVLSQQHP-PTHTLQPHHHIPVVPAQQPV 94
+W + + P YP G +P+ P Q+ P P LQP QP+
Sbjct: 298 RWKEPLMPRREEKYPLRGTDPLP--------PGQPQRIPLPGQPLQP----------QPI 339
Query: 95 I-PQQPM-MPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPL 152
+ P QP +P PGQH H +P P Q P PQP+ P P +P+ PQP P +PL
Sbjct: 340 LTPGQPQKIPTPGQHQPILTPGHSQPIPTPGQ-PLPPQPI-PTPGRPLTPQPIPTPGRPL 397
Query: 153 PPQP------PL---PPMFPMQPLPPMLPDL 174
PQP PL PP+ ++P PM P L
Sbjct: 398 TPQPIQMPGRPLRLPPPLRLLRPGQPMSPQL 428
Score = 55.5 bits (132), Expect = 3e-08
Identities = 37/101 (36%), Positives = 45/101 (44%), Gaps = 11/101 (10%)
Query: 85 IPVVPAQQPVIPQQPMMP----VPGQHSMTPIQ-HHQPNLPPPAQQPYQPQPVQPQPHQP 139
+P Q+ +P QP+ P PGQ P HQP L P QP P P QP
Sbjct: 319 LPPGQPQRIPLPGQPLQPQPILTPGQPQKIPTPGQHQPILTPGHSQPI------PTPGQP 372
Query: 140 MQPQPPVHPMQPLPPQPPLPPMFPMQPLPPMLPDLTLEAWP 180
+ PQP P +PL PQP P P+ P P +P L P
Sbjct: 373 LPPQPIPTPGRPLTPQPIPTPGRPLTPQPIQMPGRPLRLPP 413
Score = 53.1 bits (126), Expect = 1e-07
Identities = 46/121 (38%), Positives = 55/121 (45%), Gaps = 23/121 (19%)
Query: 64 QIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQ---PMMPVPGQHSMTPIQHHQPNLP 120
Q IP Q P L P H P+ QP+ PQ P P+ Q TP +P P
Sbjct: 346 QKIPTPGQHQP---ILTPGHSQPIPTPGQPLPPQPIPTPGRPLTPQPIPTP---GRPLTP 399
Query: 121 PPAQQPYQPQPVQP-----QPHQPMQPQPPVHPMQPLP-PQPPLPPMFP------MQPLP 168
P Q P +P + P +P QPM PQ + Q LP PQP LPP P +QPLP
Sbjct: 400 QPIQMPGRPLRLPPPLRLLRPGQPMSPQ--LRQTQGLPLPQPLLPPGQPKSAGRPLQPLP 457
Query: 169 P 169
P
Sbjct: 458 P 458
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 60.5 bits (145), Expect = 9e-10
Identities = 46/127 (36%), Positives = 55/127 (43%), Gaps = 18/127 (14%)
Query: 66 IPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHH---------- 115
IP+L+ P L H + +P Q PV P P + P HH
Sbjct: 884 IPLLAVAPPGVAALSIHSAVAQLPGQ-PVYPAA--FPQMAPTDVPPSPHHTVQNMRATPP 940
Query: 116 QPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLP--PMFPMQPLPPMLPD 173
QP LPP P PQPV P P + PQP + P PPQP LP PM P QP+ P P
Sbjct: 941 QPALPPQPTLP--PQPVLP-PQPTLPPQPVLPPQPTRPPQPVLPPQPMLPPQPVLPPQPA 997
Query: 174 LTLEAWP 180
L + P
Sbjct: 998 LPVRPEP 1004
Score = 59.3 bits (142), Expect = 2e-09
Identities = 46/123 (37%), Positives = 55/123 (44%), Gaps = 20/123 (16%)
Query: 74 PPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQ-PV 132
PP TL P PV+P Q P +P QP++P P+ QP LPP P QP PV
Sbjct: 945 PPQPTLPPQ---PVLPPQ-PTLPPQPVLPPQPTRPPQPVLPPQPMLPPQPVLPPQPALPV 1000
Query: 133 QP---QPHQPMQPQPPVHP------MQPLP------PQPPLPPMFPMQPLPPMLPDLTLE 177
+P QPH P Q P P P P Q P P+ P L P LP++ L
Sbjct: 1001 RPEPLQPHLPEQAAPAATPGSQILLGHPAPYAVDVAAQVPTVPVPPAAVLSPPLPEVLLP 1060
Query: 178 AWP 180
A P
Sbjct: 1061 AAP 1063
Score = 58.9 bits (141), Expect = 3e-09
Identities = 41/101 (40%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 75 PTHTLQPHHHIPVVPA--QQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPV 132
P HT+Q P PA QP +P QP++P Q ++ P QP LPP +P PQPV
Sbjct: 928 PHHTVQNMRATPPQPALPPQPTLPPQPVLPP--QPTLPP----QPVLPPQPTRP--PQPV 979
Query: 133 QPQPHQPMQPQPPVHPMQPLPPQP-PLPPMFPMQPLPPMLP 172
P P + PQP + P LP +P PL P P Q P P
Sbjct: 980 LP-PQPMLPPQPVLPPQPALPVRPEPLQPHLPEQAAPAATP 1019
Score = 58.5 bits (140), Expect = 3e-09
Identities = 44/115 (38%), Positives = 55/115 (47%), Gaps = 22/115 (19%)
Query: 71 QQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQ--QPYQ 128
QQ PP P +P V A QPV+P QP+ P H P L P +Q P Q
Sbjct: 729 QQPPPLAQPTP---LPQVLAPQPVVPLQPVPP-----------HLPPYLAPASQVGAPAQ 774
Query: 129 PQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPM---QPLPPMLPDLTLEAWP 180
+P+Q P P+QP V P +PP P +PP+ P+ LPP LPDL P
Sbjct: 775 LKPLQ-MPQAPLQPLAQVPPQ--MPPIPVVPPITPLAGIDGLPPALPDLPTATVP 826
Score = 54.3 bits (129), Expect = 6e-08
Identities = 34/89 (38%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 91 QQPVI-PQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPM 149
QQP P P+ VP +Q H P+ P + P P P P P P QP PP
Sbjct: 673 QQPTAAPGLPVGSVPAPACPPSLQQHFPD-PAMSFAPVLPPPSTPMPTGPGQPAPPGQQP 731
Query: 150 QPLPPQPPLP------PMFPMQPLPPMLP 172
PL PLP P+ P+QP+PP LP
Sbjct: 732 PPLAQPTPLPQVLAPQPVVPLQPVPPHLP 760
Score = 46.6 bits (109), Expect = 1e-05
Identities = 52/174 (29%), Positives = 65/174 (37%), Gaps = 23/174 (13%)
Query: 11 LGAAFAMPLPPHPGHPGYINFSYEVLTPLKWYQSIRPPYPSYGYEPMGGWLHHQIIPVLS 70
L A P+PP P Y FS V+ P S+ P P P L Q + +
Sbjct: 820 LPTATVPPVPP----PQY--FSPAVILP-----SLAAPLP-----PASPALPLQAVKL-- 861
Query: 71 QQHPPTHTLQPHHH--IPVVPAQQPVIPQQPM-MPVPGQHSMTPIQHHQPNLPPPAQQPY 127
HPP L +P PA P++ P + HS QP P Q
Sbjct: 862 -PHPPGAPLAMPCRTIVPNAPATIPLLAVAPPGVAALSIHSAVAQLPGQPVYPAAFPQ-M 919
Query: 128 QPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPPMLPDLTLEAWPS 181
P V P PH +Q P LPPQP LPP + P P + P L P+
Sbjct: 920 APTDVPPSPHHTVQNMRATPPQPALPPQPTLPPQPVLPPQPTLPPQPVLPPQPT 973
Score = 37.0 bits (84), Expect = 0.010
Identities = 32/106 (30%), Positives = 41/106 (38%), Gaps = 20/106 (18%)
Query: 69 LSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPY- 127
L+ + + L H P+ Q V+ P P P S + LPPPA +P
Sbjct: 1426 LTSELETSQPLAETHEAPLA-VQPLVVGLAPCTPAPEAASTRDASAPREPLPPPAPEPSP 1484
Query: 128 ---QPQPV--QPQPHQP-----------MQPQPPVHPMQPLPPQPP 157
PQP QP P P P PP+ P +PPQPP
Sbjct: 1485 HSGTPQPALGQPAPLLPAAVGAVSLATSQLPSPPLGP--TVPPQPP 1528
Score = 31.6 bits (70), Expect = 0.43
Identities = 25/81 (30%), Positives = 28/81 (34%)
Query: 89 PAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHP 148
PAQ P PV Q + + QP P P P P Q P P +
Sbjct: 647 PAQCVCSPPVSEGPVLPQSLPSLGAYQQPTAAPGLPVGSVPAPACPPSLQQHFPDPAMSF 706
Query: 149 MQPLPPQPPLPPMFPMQPLPP 169
LPP P P QP PP
Sbjct: 707 APVLPPPSTPMPTGPGQPAPP 727
Score = 30.8 bits (68), Expect = 0.74
Identities = 16/55 (29%), Positives = 24/55 (43%)
Query: 100 MMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPP 154
+ P Q +P + P +P Q Y Q QP P +P +P+ H + P P
Sbjct: 550 LQPKEQQDVGSPDKARGPPVPLQVQVTYHAQAGQPGPPEPEEPEADQHLLPPTLP 604
Score = 29.6 bits (65), Expect = 1.7
Identities = 24/90 (26%), Positives = 32/90 (35%), Gaps = 2/90 (2%)
Query: 74 PPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQ 133
PP L P ++PA ++PQ P S+ + L PPA P P
Sbjct: 1045 PPAAVLSPPLPEVLLPAAPELLPQFPSSLATVSASVQSVPTQTATLLPPANPPLPGGPGI 1104
Query: 134 PQPHQPMQPQPPVHPMQPLPPQPPLPPMFP 163
P + Q V P+Q PP P
Sbjct: 1105 ASPCPTV--QLTVEPVQEEQASQDKPPGLP 1132
Score = 27.3 bits (59), Expect = 8.2
Identities = 34/119 (28%), Positives = 41/119 (34%), Gaps = 32/119 (26%)
Query: 86 PVVPAQQPV--IPQQPMMP----VPGQHSMTPIQHHQPNLP-----------PPAQQPYQ 128
P+ P+ PV +PQ P +P S T Q P P P A+
Sbjct: 1383 PLAPSSPPVTALPQDGAAPATSTMPEPASGTASQAGGPGTPQGLTSELETSQPLAETHEA 1442
Query: 129 PQPVQPQPH--QPMQPQPPVH-------PMQPLPPQPPLPPMFPMQPLP------PMLP 172
P VQP P P P P +PLPP P P P P P+LP
Sbjct: 1443 PLAVQPLVVGLAPCTPAPEAASTRDASAPREPLPPPAPEPSPHSGTPQPALGQPAPLLP 1501
>gi|50345997 E1A binding protein p300 [Homo sapiens]
Length = 2414
Score = 59.7 bits (143), Expect = 1e-09
Identities = 48/138 (34%), Positives = 57/138 (41%), Gaps = 19/138 (13%)
Query: 67 PVLSQQHP---PTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPA 123
P L Q P P+ T PHH P + AQQP P PVP +M P Q PPP
Sbjct: 825 PALHQNSPSPVPSRTPTPHHTPPSIGAQQPPATTIPA-PVPTPPAMPPGPQSQALHPPPR 883
Query: 124 QQPYQPQ---PVQPQPHQPMQPQPPVHPMQPLPPQ-------PPLPPMFPMQPLPPM-LP 172
Q P P P Q QP P P QP Q P P+ P QP P+ P
Sbjct: 884 QTPTPPTTQLPQQVQPSLPAAPSADQPQQQPRSQQSTAASVPTPTAPLLPPQPATPLSQP 943
Query: 173 DLTLEAW----PSTDKTK 186
+++E PST T+
Sbjct: 944 AVSIEGQVSNPPSTSSTE 961
Score = 52.8 bits (125), Expect = 2e-07
Identities = 49/146 (33%), Positives = 61/146 (41%), Gaps = 17/146 (11%)
Query: 47 PPYPSYGYEPMG-GWLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPG 105
P PS G P+ + PV S PP + H H P +P QP + Q PVP
Sbjct: 781 PLAPSSGQAPVSQAQMSSSSCPVNSPIMPPG-SQGSHIHCPQLP--QPALHQNSPSPVP- 836
Query: 106 QHSMTPIQHHQPNLPPPAQQPYQ--PQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFP 163
S TP HH P Q P P PV P P P P + P P Q P PP
Sbjct: 837 --SRTPTPHHTPPSIGAQQPPATTIPAPVPTPPAMP--PGPQSQALHPPPRQTPTPPTTQ 892
Query: 164 M-QPLPPMLPDLTLEAWPSTDKTKRE 188
+ Q + P LP A PS D+ +++
Sbjct: 893 LPQQVQPSLP-----AAPSADQPQQQ 913
Score = 38.9 bits (89), Expect = 0.003
Identities = 31/99 (31%), Positives = 38/99 (38%), Gaps = 20/99 (20%)
Query: 84 HIPVVPA--QQPVIPQQ----------PMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQP 131
+IP+ P+ Q PV Q P+MP Q S H P LP PA P P
Sbjct: 779 NIPLAPSSGQAPVSQAQMSSSSCPVNSPIMPPGSQGSHI----HCPQLPQPALHQNSPSP 834
Query: 132 VQPQPHQPMQPQPPVHPMQP----LPPQPPLPPMFPMQP 166
V + P P + QP +P P PP P P
Sbjct: 835 VPSRTPTPHHTPPSIGAQQPPATTIPAPVPTPPAMPPGP 873
Score = 38.5 bits (88), Expect = 0.004
Identities = 27/92 (29%), Positives = 36/92 (39%), Gaps = 8/92 (8%)
Query: 94 VIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQP----PVH-- 147
V+ QQ +P P + T QP P Q QPQP P P P+ PV
Sbjct: 1840 VVGQQQGLPSPTPATPTTPTGQQPTTPQTPQPTSQPQPTPPNSMPPYLPRTQAAGPVSQG 1899
Query: 148 --PMQPLPPQPPLPPMFPMQPLPPMLPDLTLE 177
Q PP PP P+ PP ++ ++
Sbjct: 1900 KAAGQVTPPTPPQTAQPPLPGPPPAAVEMAMQ 1931
Score = 37.4 bits (85), Expect = 0.008
Identities = 29/85 (34%), Positives = 33/85 (38%), Gaps = 9/85 (10%)
Query: 79 LQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQH------HQPNLPPPAQQPY-QPQP 131
LQ PV P P+ PQQ M+P Q Q +Q P P P Q QP
Sbjct: 2265 LQQQMGSPVQP--NPMSPQQHMLPNQAQSPHLQGQQIPNSLSNQVRSPQPVPSPRPQSQP 2322
Query: 132 VQPQPHQPMQPQPPVHPMQPLPPQP 156
P MQPQP H + P P
Sbjct: 2323 PHSSPSPRMQPQPSPHHVSPQTSSP 2347
Score = 32.0 bits (71), Expect = 0.33
Identities = 37/149 (24%), Positives = 52/149 (34%), Gaps = 11/149 (7%)
Query: 43 QSIRPPYPSYGYEPMGGWLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPV----IPQQ 98
Q + P P+ P G P + Q PT ++P A PV Q
Sbjct: 1845 QGLPSPTPATPTTPTGQQPTTPQTPQPTSQPQPTPPNSMPPYLPRTQAAGPVSQGKAAGQ 1904
Query: 99 PMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQP------HQPMQPQ-PPVHPMQP 151
P P Q + P+ P A Q + Q Q +P+Q Q PP+ PM P
Sbjct: 1905 VTPPTPPQTAQPPLPGPPPAAVEMAMQIQRAAETQRQMAHVQIFQRPIQHQMPPMTPMAP 1964
Query: 152 LPPQPPLPPMFPMQPLPPMLPDLTLEAWP 180
+ PP P L P + ++ P
Sbjct: 1965 MGMNPPPMTRGPSGHLEPGMGPTGMQQQP 1993
Score = 32.0 bits (71), Expect = 0.33
Identities = 31/113 (27%), Positives = 39/113 (34%), Gaps = 12/113 (10%)
Query: 71 QQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMT-------PIQHHQPNLPPPA 123
Q PPT +P P + Q Q M PIQH P + P A
Sbjct: 1904 QVTPPTPPQTAQPPLPGPPPAAVEMAMQIQRAAETQRQMAHVQIFQRPIQHQMPPMTPMA 1963
Query: 124 QQPYQPQPVQPQPHQPMQPQPPVHPMQPLPP--QPPLPPMFPMQ---PLPPML 171
P P+ P ++P MQ PP Q LP +Q P P M+
Sbjct: 1964 PMGMNPPPMTRGPSGHLEPGMGPTGMQQQPPWSQGGLPQPQQLQSGMPRPAMM 2016
Score = 27.7 bits (60), Expect = 6.3
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 125 QPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPPML 171
Q YQ + +Q Q P+QP P+ P Q + P P Q +P L
Sbjct: 2258 QAYQQRLLQQQMGSPVQPN-PMSPQQHMLPNQAQSPHLQGQQIPNSL 2303
Score = 27.3 bits (59), Expect = 8.2
Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 11/77 (14%)
Query: 80 QPHHHIPVVPAQQPVIPQQPMMP-VPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQ 138
QP P +P QP + Q P MP G HS +Q+ P + Q+ P Q QP Q
Sbjct: 2098 QPIPGQPGMPQGQPGL-QPPTMPGQQGVHSNPAMQNMNP-MQAGVQRAGLP---QQQPQQ 2152
Query: 139 PMQPQPPVHPMQPLPPQ 155
+QP PM + PQ
Sbjct: 2153 QLQP-----PMGGMSPQ 2164
>gi|19923345 RNA binding motif protein 12 [Homo sapiens]
Length = 932
Score = 58.9 bits (141), Expect = 3e-09
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 85 IPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQP 144
+P + +P P+ P+P S+ P+ P++PP P P P P P+ P P
Sbjct: 175 VPSTASPMNTVPPPPIPPIPAMPSLPPM----PSIPPIPVPP--PVPTLP----PVPPVP 224
Query: 145 PVHPMQPLPPQPPLPPMFPMQPL--PPMLP 172
P+ P+ +PP PLPPM M PL PP+ P
Sbjct: 225 PIPPVPSVPPMTPLPPMSGMPPLNPPPVAP 254
Score = 43.1 bits (100), Expect = 1e-04
Identities = 31/94 (32%), Positives = 39/94 (41%), Gaps = 8/94 (8%)
Query: 74 PPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQ 133
PP ++ P P VP PV P P+ PVP MTP+ P P P PV
Sbjct: 200 PPMPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLP------PMSGMPPLNPPPVA 253
Query: 134 PQPHQPMQPQPPVHPMQPLPPQ--PPLPPMFPMQ 165
P P P++ L P PL P+ P+Q
Sbjct: 254 PLPAGMNGSGAPMNLNNNLNPMFLGPLNPVNPIQ 287
Score = 37.4 bits (85), Expect = 0.008
Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 126 PYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPPMLPDLTLEAWPS 181
P P+ P P+ P P + + P+P PP+P P+ LPP+ P + PS
Sbjct: 176 PSTASPMNTVPPPPIPPIPAMPSLPPMPSIPPIPVPPPVPTLPPVPPVPPIPPVPS 231
>gi|23510462 RNA binding motif protein 12 [Homo sapiens]
Length = 932
Score = 58.9 bits (141), Expect = 3e-09
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 85 IPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQP 144
+P + +P P+ P+P S+ P+ P++PP P P P P P+ P P
Sbjct: 175 VPSTASPMNTVPPPPIPPIPAMPSLPPM----PSIPPIPVPP--PVPTLP----PVPPVP 224
Query: 145 PVHPMQPLPPQPPLPPMFPMQPL--PPMLP 172
P+ P+ +PP PLPPM M PL PP+ P
Sbjct: 225 PIPPVPSVPPMTPLPPMSGMPPLNPPPVAP 254
Score = 43.1 bits (100), Expect = 1e-04
Identities = 31/94 (32%), Positives = 39/94 (41%), Gaps = 8/94 (8%)
Query: 74 PPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQ 133
PP ++ P P VP PV P P+ PVP MTP+ P P P PV
Sbjct: 200 PPMPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLP------PMSGMPPLNPPPVA 253
Query: 134 PQPHQPMQPQPPVHPMQPLPPQ--PPLPPMFPMQ 165
P P P++ L P PL P+ P+Q
Sbjct: 254 PLPAGMNGSGAPMNLNNNLNPMFLGPLNPVNPIQ 287
Score = 37.4 bits (85), Expect = 0.008
Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 126 PYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPPMLPDLTLEAWPS 181
P P+ P P+ P P + + P+P PP+P P+ LPP+ P + PS
Sbjct: 176 PSTASPMNTVPPPPIPPIPAMPSLPPMPSIPPIPVPPPVPTLPPVPPVPPIPPVPS 231
>gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens]
Length = 464
Score = 58.9 bits (141), Expect = 3e-09
Identities = 55/159 (34%), Positives = 62/159 (38%), Gaps = 25/159 (15%)
Query: 22 HPGHPGYINFSYEVLTPLKWYQSIRPPYPSYGYEPMGGWLHHQIIPVLSQQHPPTHTLQP 81
HP PG + V P + PP P G P +H P HPP + P
Sbjct: 316 HPPAPGVHPPTSGVHPPAP---GVHPPAP--GVHPPAPGVH----PPAPGVHPPAPGVHP 366
Query: 82 ------HHHIPVV-PAQQPVIPQQPMM--PVPGQHSMTPIQHHQPNLPPPAQQPYQPQPV 132
H P V PA V PQ P + P PG H P H Q PP P P V
Sbjct: 367 PPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQ----PPGVHPSAP-GV 421
Query: 133 QPQPHQPMQPQPPVHPMQPLPP--QPPLPPMFPMQPLPP 169
PQP P VHP P+PP +PPLP P PP
Sbjct: 422 HPQPPGVHPSNPGVHPPTPMPPMLRPPLPSEGPGNIPPP 460
Score = 53.1 bits (126), Expect = 1e-07
Identities = 57/172 (33%), Positives = 64/172 (37%), Gaps = 31/172 (18%)
Query: 19 LPPHPGHPGYINFSYEVLTPLKWYQSIRPPYPSYGYEPMGGWLHHQIIPVLSQQHPPTHT 78
LPP P P E L P PP P G P G Q+ P HPP
Sbjct: 241 LPPRPPLP-------ESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPV 293
Query: 79 LQP-----HHHIP-VVPAQQPVIPQQPMM---------PVPGQHSMTPIQH-HQPNLPPP 122
+ P H P V P V P P + P PG H P H P + PP
Sbjct: 294 VHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPP 353
Query: 123 AQQPYQPQP-VQPQPHQPMQPQPP-VHPMQP-LPPQ-----PPLPPMFPMQP 166
A + P P V P P + PQ P VHP P + PQ PP P M P P
Sbjct: 354 APGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAP 405
Score = 53.1 bits (126), Expect = 1e-07
Identities = 47/145 (32%), Positives = 53/145 (36%), Gaps = 25/145 (17%)
Query: 45 IRPPYPSYGYEPMGGWLHHQIIPVLSQQHPPT---HTLQPHHHIPVVPAQQPVIPQQPMM 101
+ PP P G P +H P S HPP H P H P P P
Sbjct: 308 VHPPAP--GVHPPAPGVH----PPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPA 361
Query: 102 P-------------VPGQHSMTPIQHHQ-PNLPPPAQQPYQPQP-VQPQPHQPMQPQPPV 146
P PG H P H Q P + PPA + P V PQP P V
Sbjct: 362 PGVHPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGV 421
Query: 147 HPMQPLPPQPPLPPMFPMQPLPPML 171
HP QP P P + P P+PPML
Sbjct: 422 HP-QPPGVHPSNPGVHPPTPMPPML 445
Score = 44.3 bits (103), Expect = 6e-05
Identities = 43/137 (31%), Positives = 50/137 (36%), Gaps = 19/137 (13%)
Query: 22 HPGHPGYINFSYEVLTPLKWYQSIRPPYPSYGYEPMGGWLHHQIIPVLSQQHPPTHTLQP 81
HP PG + V P + PP PS G P +H P + Q P H P
Sbjct: 344 HPPAPGVHPPAPGVHPPAP---GVHPP-PSAGVHPQAPGVH-PAAPAVHPQAPGVHPPAP 398
Query: 82 HHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPM- 140
H Q P + QP PG H P H Q PP P P P P PM
Sbjct: 399 GMH-----PQAPGVHPQP----PGVHPSAPGVHPQ----PPGVHPSNPGVHPPTPMPPML 445
Query: 141 QPQPPVHPMQPLPPQPP 157
+P P +PP PP
Sbjct: 446 RPPLPSEGPGNIPPPPP 462
Score = 42.0 bits (97), Expect = 3e-04
Identities = 38/107 (35%), Positives = 43/107 (40%), Gaps = 11/107 (10%)
Query: 67 PVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQP 126
P L PP L P P P P+ P P P P S P P LPPPA
Sbjct: 235 PPLMNGLPPRPPL-PESLPPPPPGGLPLPPMPPTGPAP---SGPP---GPPQLPPPAPGV 287
Query: 127 YQPQPVQPQPHQPMQPQPP-VHPMQP--LPPQPPL-PPMFPMQPLPP 169
+ P PV P + P P VHP P PP P + PP + P P
Sbjct: 288 HPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAP 334
Score = 37.7 bits (86), Expect = 0.006
Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 117 PNLPPPAQQPYQP--QPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPPMLP 172
P PP ++P P + P+P P PP PLPP PP P P PP LP
Sbjct: 224 PAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGPPQLP 281
Score = 35.8 bits (81), Expect = 0.023
Identities = 28/82 (34%), Positives = 33/82 (40%), Gaps = 7/82 (8%)
Query: 93 PVIPQQPMMPVPGQHSMTPIQHHQPNLPP-PAQQPYQPQPVQPQPHQPMQPQPPVHPMQP 151
P P P P + P+ + P PP P P P P P PM P P P
Sbjct: 218 PAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLP--PPPPGGLPLPPMPPTGPAPSGPP 275
Query: 152 LPPQ--PPLPPMFPMQPL--PP 169
PPQ PP P + P P+ PP
Sbjct: 276 GPPQLPPPAPGVHPPAPVVHPP 297
Score = 35.0 bits (79), Expect = 0.039
Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 16/88 (18%)
Query: 86 PVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPP 145
P +PA P + + P + G P+ +LPPP P P+ P PP
Sbjct: 221 PSLPAGPPGVKRPPPPLMNGLPPRPPLPE---SLPPP-----------PPGGLPLPPMPP 266
Query: 146 VHPMQPLPPQPP-LPPMFP-MQPLPPML 171
P PP PP LPP P + P P++
Sbjct: 267 TGPAPSGPPGPPQLPPPAPGVHPPAPVV 294
Score = 33.9 bits (76), Expect = 0.088
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 10/57 (17%)
Query: 124 QQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFP--------MQPLPPMLP 172
++P P + P +P PP+ M LPP+PPLP P + P+PP P
Sbjct: 215 EKPPAPPSLPAGPPGVKRPPPPL--MNGLPPRPPLPESLPPPPPGGLPLPPMPPTGP 269
>gi|195232763 ADAM metallopeptidase domain 29 preproprotein [Homo
sapiens]
Length = 820
Score = 58.5 bits (140), Expect = 3e-09
Identities = 37/109 (33%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
Query: 67 PVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQP 126
P+ QQ T + + I P + P Q +MP Q +TP Q H +P +Q P
Sbjct: 703 PIKKQQDVQTPSAKEEEKIQRRPHELPPQSQPWVMPSQSQPPVTPSQSHPQVMPSQSQPP 762
Query: 127 YQPQPVQPQPHQPMQPQPPVHPMQPLP---PQPPLPPMFPMQPLPPMLP 172
P QP+ P Q QPPV P Q P P PP+ P Q P ++P
Sbjct: 763 VTPSQSQPRV-MPSQSQPPVMPSQSHPQLTPSQSQPPVTPSQRQPQLMP 810
Score = 46.2 bits (108), Expect = 2e-05
Identities = 32/91 (35%), Positives = 37/91 (40%), Gaps = 13/91 (14%)
Query: 70 SQQHPPTHTLQPHHHIPVVPAQQPVIPQQP---MMPVPGQHSMTPIQHHQPNLPPPAQQP 126
SQ PP Q H + +Q PV P Q +MP Q + P Q H P L P QP
Sbjct: 739 SQSQPPVTPSQSHPQVMPSQSQPPVTPSQSQPRVMPSQSQPPVMPSQSH-PQLTPSQSQP 797
Query: 127 YQPQPVQPQPHQPMQPQPPVHPMQPLPPQPP 157
P P Q QP + P Q PP P
Sbjct: 798 ---------PVTPSQRQPQLMPSQSQPPVTP 819
>gi|195232761 ADAM metallopeptidase domain 29 preproprotein [Homo
sapiens]
Length = 820
Score = 58.5 bits (140), Expect = 3e-09
Identities = 37/109 (33%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
Query: 67 PVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQP 126
P+ QQ T + + I P + P Q +MP Q +TP Q H +P +Q P
Sbjct: 703 PIKKQQDVQTPSAKEEEKIQRRPHELPPQSQPWVMPSQSQPPVTPSQSHPQVMPSQSQPP 762
Query: 127 YQPQPVQPQPHQPMQPQPPVHPMQPLP---PQPPLPPMFPMQPLPPMLP 172
P QP+ P Q QPPV P Q P P PP+ P Q P ++P
Sbjct: 763 VTPSQSQPRV-MPSQSQPPVMPSQSHPQLTPSQSQPPVTPSQRQPQLMP 810
Score = 46.2 bits (108), Expect = 2e-05
Identities = 32/91 (35%), Positives = 37/91 (40%), Gaps = 13/91 (14%)
Query: 70 SQQHPPTHTLQPHHHIPVVPAQQPVIPQQP---MMPVPGQHSMTPIQHHQPNLPPPAQQP 126
SQ PP Q H + +Q PV P Q +MP Q + P Q H P L P QP
Sbjct: 739 SQSQPPVTPSQSHPQVMPSQSQPPVTPSQSQPRVMPSQSQPPVMPSQSH-PQLTPSQSQP 797
Query: 127 YQPQPVQPQPHQPMQPQPPVHPMQPLPPQPP 157
P P Q QP + P Q PP P
Sbjct: 798 ---------PVTPSQRQPQLMPSQSQPPVTP 819
>gi|195232759 ADAM metallopeptidase domain 29 preproprotein [Homo
sapiens]
Length = 820
Score = 58.5 bits (140), Expect = 3e-09
Identities = 37/109 (33%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
Query: 67 PVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQP 126
P+ QQ T + + I P + P Q +MP Q +TP Q H +P +Q P
Sbjct: 703 PIKKQQDVQTPSAKEEEKIQRRPHELPPQSQPWVMPSQSQPPVTPSQSHPQVMPSQSQPP 762
Query: 127 YQPQPVQPQPHQPMQPQPPVHPMQPLP---PQPPLPPMFPMQPLPPMLP 172
P QP+ P Q QPPV P Q P P PP+ P Q P ++P
Sbjct: 763 VTPSQSQPRV-MPSQSQPPVMPSQSHPQLTPSQSQPPVTPSQRQPQLMP 810
Score = 46.2 bits (108), Expect = 2e-05
Identities = 32/91 (35%), Positives = 37/91 (40%), Gaps = 13/91 (14%)
Query: 70 SQQHPPTHTLQPHHHIPVVPAQQPVIPQQP---MMPVPGQHSMTPIQHHQPNLPPPAQQP 126
SQ PP Q H + +Q PV P Q +MP Q + P Q H P L P QP
Sbjct: 739 SQSQPPVTPSQSHPQVMPSQSQPPVTPSQSQPRVMPSQSQPPVMPSQSH-PQLTPSQSQP 797
Query: 127 YQPQPVQPQPHQPMQPQPPVHPMQPLPPQPP 157
P P Q QP + P Q PP P
Sbjct: 798 ---------PVTPSQRQPQLMPSQSQPPVTP 819
>gi|73765552 ADAM metallopeptidase domain 29 preproprotein [Homo
sapiens]
Length = 820
Score = 58.5 bits (140), Expect = 3e-09
Identities = 37/109 (33%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
Query: 67 PVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQP 126
P+ QQ T + + I P + P Q +MP Q +TP Q H +P +Q P
Sbjct: 703 PIKKQQDVQTPSAKEEEKIQRRPHELPPQSQPWVMPSQSQPPVTPSQSHPQVMPSQSQPP 762
Query: 127 YQPQPVQPQPHQPMQPQPPVHPMQPLP---PQPPLPPMFPMQPLPPMLP 172
P QP+ P Q QPPV P Q P P PP+ P Q P ++P
Sbjct: 763 VTPSQSQPRV-MPSQSQPPVMPSQSHPQLTPSQSQPPVTPSQRQPQLMP 810
Score = 46.2 bits (108), Expect = 2e-05
Identities = 32/91 (35%), Positives = 37/91 (40%), Gaps = 13/91 (14%)
Query: 70 SQQHPPTHTLQPHHHIPVVPAQQPVIPQQP---MMPVPGQHSMTPIQHHQPNLPPPAQQP 126
SQ PP Q H + +Q PV P Q +MP Q + P Q H P L P QP
Sbjct: 739 SQSQPPVTPSQSHPQVMPSQSQPPVTPSQSQPRVMPSQSQPPVMPSQSH-PQLTPSQSQP 797
Query: 127 YQPQPVQPQPHQPMQPQPPVHPMQPLPPQPP 157
P P Q QP + P Q PP P
Sbjct: 798 ---------PVTPSQRQPQLMPSQSQPPVTP 819
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 58.5 bits (140), Expect = 3e-09
Identities = 35/104 (33%), Positives = 41/104 (39%), Gaps = 14/104 (13%)
Query: 67 PVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQP 126
P+L ++ PPT P P QP P P P P S P+ P+ PPP P
Sbjct: 1451 PLLEEKPPPTP--------PPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLP 1502
Query: 127 YQPQPVQPQPHQPMQP------QPPVHPMQPLPPQPPLPPMFPM 164
P P P P P P PP P P P P LP P+
Sbjct: 1503 PPPPPAMPSPPPPPPPAAAPLAAPPEEPAAPSPEDPELPDTRPL 1546
Score = 51.2 bits (121), Expect = 5e-07
Identities = 36/98 (36%), Positives = 43/98 (43%), Gaps = 18/98 (18%)
Query: 86 PVVPAQQPVIPQQPMMP-VPGQHSM-TP----IQHHQPNLPPPAQQPYQPQPVQPQPHQP 139
P+ PA +P P +P +P +S TP ++ P PPPA P P P P QP
Sbjct: 1423 PLAPAA--AVPGPPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPPPPPPQP 1480
Query: 140 MQPQPPV--------HPMQPLPPQPPLPPMFPMQPLPP 169
P PP P PLPP P PP P P PP
Sbjct: 1481 ALPSPPPLVAPTPSSPPPPPLPPPP--PPAMPSPPPPP 1516
Score = 49.3 bits (116), Expect = 2e-06
Identities = 35/98 (35%), Positives = 40/98 (40%), Gaps = 19/98 (19%)
Query: 91 QQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQP---VQPQPHQPMQP--QPP 145
+ P++ ++P P P QP PPP QP P P V P P P P PP
Sbjct: 1449 EPPLLEEKP----PPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPP 1504
Query: 146 VHPMQPLPPQPP--------LPPMFPMQPLP--PMLPD 173
P P PP PP PP P P P P LPD
Sbjct: 1505 PPPAMPSPPPPPPPAAAPLAAPPEEPAAPSPEDPELPD 1542
Score = 38.9 bits (89), Expect = 0.003
Identities = 34/125 (27%), Positives = 49/125 (39%), Gaps = 29/125 (23%)
Query: 74 PPT-HTLQPHHHIPVVPAQQP----VIPQQPMMPVP----------------GQHSMTPI 112
PPT + QP H ++ A P V+P P +P G H + P
Sbjct: 768 PPTAQSTQPTPHGLLLEAGGPDLPLVLPPPPPQLLPSVLSHAPSPSPSASKVGVHLLEPA 827
Query: 113 QHH-QPNLPPPAQQPYQPQPVQPQPH------QPMQPQPPVHPMQPLPPQPPLPPMF-PM 164
P PPP P P P+Q + H +P P P + P + L P + + +
Sbjct: 828 TRDGAPQPPPPPPPPPPPMPLQLEAHLRSHGLEPAAPSPRLRPEESLDPPGAMQELLGAL 887
Query: 165 QPLPP 169
+PLPP
Sbjct: 888 EPLPP 892
Score = 33.1 bits (74), Expect = 0.15
Identities = 24/75 (32%), Positives = 26/75 (34%), Gaps = 1/75 (1%)
Query: 86 PVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPP 145
P PA P P P G TP PN PP +P+ P Q PP
Sbjct: 982 PGPPAYDPYGPYCPGR-ASGAGPETPGLGLDPNKPPELPSTVNAEPLGLIQSGPHQAAPP 1040
Query: 146 VHPMQPLPPQPPLPP 160
P P PP P P
Sbjct: 1041 PPPPPPPPPAPASEP 1055
Score = 32.7 bits (73), Expect = 0.20
Identities = 27/91 (29%), Positives = 35/91 (38%), Gaps = 14/91 (15%)
Query: 95 IPQQPMMPVPGQHSMTPIQHHQ------PNLP---PPAQQPYQPQPVQPQPH-QPMQPQP 144
+ + P P P S P H P+LP PP P + P P +
Sbjct: 760 LQKSPPPPPPTAQSTQPTPHGLLLEAGGPDLPLVLPPPPPQLLPSVLSHAPSPSPSASKV 819
Query: 145 PVHPMQPLP----PQPPLPPMFPMQPLPPML 171
VH ++P PQPP PP P P+P L
Sbjct: 820 GVHLLEPATRDGAPQPPPPPPPPPPPMPLQL 850
Score = 30.0 bits (66), Expect = 1.3
Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 14/82 (17%)
Query: 69 LSQQHPP-----THTLQPHHHIPVVPAQQPVIPQQ-PMMPVPGQHSMTPIQHHQPNLPPP 122
LS Q PP L PH + + P+Q P +P + G + P L P
Sbjct: 168 LSLQDPPFSPPANGLLSPHDVLHLKPSQAPTVPSSLGFERLAGGGVLGP-----AGLGPA 222
Query: 123 AQQPYQPQPVQPQP---HQPMQ 141
PY+P P P P H P Q
Sbjct: 223 QTPPYRPGPPDPPPPPRHLPTQ 244
Score = 29.3 bits (64), Expect = 2.2
Identities = 13/31 (41%), Positives = 15/31 (48%)
Query: 136 PHQPMQPQPPVHPMQPLPPQPPLPPMFPMQP 166
P P + PP P + L PQPP P P P
Sbjct: 1306 PLSPPKSVPPSVPARGLQPQPPATPAVPHPP 1336
Score = 29.3 bits (64), Expect = 2.2
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Query: 102 PVPGQHS---MTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPL 158
PVP + S P+ + PPP P+P P+ + +PP + P+PP
Sbjct: 1671 PVPVRRSGQAKNPVSAGGSSAPPPKAPAPPPKPETPE--KTTSEKPPEQTPETAMPEPPA 1728
Query: 159 P 159
P
Sbjct: 1729 P 1729
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 57.4 bits (137), Expect = 7e-09
Identities = 43/124 (34%), Positives = 51/124 (41%), Gaps = 22/124 (17%)
Query: 39 LKWYQSIRPPYPSYGYEPMGGWLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQ 98
L+ Q ++PP P ++P + Q P L P H P+ Q + QQ
Sbjct: 932 LQQLQKVQPPTP--------------LLPSVKVQSQPPPPLPPPPH----PSVQQQLQQQ 973
Query: 99 PMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHP---MQPLPPQ 155
P P P Q P Q HQP P QP Q QP P QPP HP QP PPQ
Sbjct: 974 PPPPPPPQPQPPPQQQHQPPPRPVHLQPMQFSTHIQQPPPPQGQQPP-HPPPGQQPPPPQ 1032
Query: 156 PPLP 159
P P
Sbjct: 1033 PAKP 1036
Score = 55.1 bits (131), Expect = 4e-08
Identities = 43/157 (27%), Positives = 64/157 (40%), Gaps = 31/157 (19%)
Query: 45 IRPPYPSYGYEPMGGWLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVP 104
+ P P ++P+G H P+L H P L PH P + P + Q ++ P
Sbjct: 808 LEPQLPGSVFDPIG----HFTQPIL---HLPQPELPPHLPQPPEHSTPPHLNQHAVVSPP 860
Query: 105 GQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPL--PPQ------- 155
H+ P QP+ P P+P +P P Q P+ P P+ PPQ
Sbjct: 861 ALHNALP---QQPSRPSNRAAALPPKPARPPAVSPALTQTPLLPQPPMAQPPQVLLEDEE 917
Query: 156 PPLPPMFPM------------QPLPPMLPDLTLEAWP 180
PP PP+ M QP P+LP + +++ P
Sbjct: 918 PPAPPLTSMQMQLYLQQLQKVQPPTPLLPSVKVQSQP 954
Score = 55.1 bits (131), Expect = 4e-08
Identities = 54/177 (30%), Positives = 63/177 (35%), Gaps = 45/177 (25%)
Query: 16 AMPLPPHPGHPGYINFSYEVLTPLKWYQSIRPPYPSYGYEPMGGWLHHQIIPVLSQQHPP 75
A LPP P P ++ + TPL P P P +L + PP
Sbjct: 877 AAALPPKPARPPAVSPAL-TQTPLL-------PQPPMAQPPQ---------VLLEDEEPP 919
Query: 76 THTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPA---------QQP 126
L + Q V P P++P S P P LPPP QQP
Sbjct: 920 APPLTSMQMQLYLQQLQKVQPPTPLLPSVKVQSQPP-----PPLPPPPHPSVQQQLQQQP 974
Query: 127 YQPQPVQPQPHQPMQPQPPVHPM------------QPLPPQPPLPPMFP--MQPLPP 169
P P QPQP Q QPP P+ QP PPQ PP P QP PP
Sbjct: 975 PPPPPPQPQPPPQQQHQPPPRPVHLQPMQFSTHIQQPPPPQGQQPPHPPPGQQPPPP 1031
Score = 53.1 bits (126), Expect = 1e-07
Identities = 34/103 (33%), Positives = 38/103 (36%), Gaps = 21/103 (20%)
Query: 73 HPPTHTLQPHHHIPVVPAQQPV-IPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQP 131
HP + HHH Q P +PQQP PPP QQP P P
Sbjct: 730 HPGREQKKHHHHHHQQMQQAPAPVPQQP--------------------PPPPQQPPPPPP 769
Query: 132 VQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPPMLPDL 174
Q Q P P PP P Q P PP F +P + P L
Sbjct: 770 PQQQQQPPPPPPPPSMPQQAAPAMKSSPPPFIATQVPVLEPQL 812
Score = 49.3 bits (116), Expect = 2e-06
Identities = 45/159 (28%), Positives = 64/159 (40%), Gaps = 10/159 (6%)
Query: 17 MPLPPHPGHPGYINFSYEVLTPLKWYQSI--RPPYPSYGYE--PMGGWLHHQIIPVLSQQ 72
+P PP P ++N + V++P + ++ +P PS P + P L+Q
Sbjct: 839 LPQPPEHSTPPHLN-QHAVVSPPALHNALPQQPSRPSNRAAALPPKPARPPAVSPALTQT 897
Query: 73 HPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPN---LPPPAQQPYQP 129
P P P V + P P+ + Q + +Q QP LP Q P
Sbjct: 898 --PLLPQPPMAQPPQVLLEDEEPPAPPLTSMQMQLYLQQLQKVQPPTPLLPSVKVQSQPP 955
Query: 130 QPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLP 168
P+ P PH +Q Q P P PPQP PP QP P
Sbjct: 956 PPLPPPPHPSVQQQLQQQPPPPPPPQPQPPPQQQHQPPP 994
Score = 43.9 bits (102), Expect = 8e-05
Identities = 37/104 (35%), Positives = 44/104 (42%), Gaps = 20/104 (19%)
Query: 96 PQQPMMPVPGQHSMTP-IQHHQPNLPPPAQQPYQPQPVQPQ-----------PHQPMQPQ 143
P +P Q S P Q QPN PP P+ V P P QP+Q
Sbjct: 191 PGVSTVPNTTQASTPPQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMTVVPPQPLQTP 250
Query: 144 PPVHPMQPLPPQPPLPPMFPMQPLPPMLPDLTLEAWPSTDKTKR 187
PPV P QP PP P P P+Q PP+ + A P KTK+
Sbjct: 251 PPV-PPQPQPPPAPAPQ--PVQSHPPI-----IAATPQPVKTKK 286
Score = 43.5 bits (101), Expect = 1e-04
Identities = 60/231 (25%), Positives = 78/231 (33%), Gaps = 64/231 (27%)
Query: 18 PLPPHPGHPGYINFSYEVLTPLKWYQSIRPPYPSYGYEPMGGWLHHQIIPVLSQQHPPTH 77
PLPP P HP + P Q PP + P L QQ PP
Sbjct: 957 PLPPPP-HPSVQQQLQQQPPPPPPPQPQPPPQQQHQPPPRPVHLQPMQFSTHIQQPPPPQ 1015
Query: 78 TLQPHHHIPVVPAQQPVIPQ--QPMMPVPGQHSM-----------------TPIQHHQPN 118
QP H P QQP PQ +P + HS +P+ H P
Sbjct: 1016 GQQPPHP---PPGQQPPPPQPAKPQQVIQHHHSPRHHKSDPYSTGHLREAPSPLMIHSPQ 1072
Query: 119 LPP--------PAQQPYQPQP--------VQPQP---------HQP----------MQPQ 143
+ P QQ QP+ VQPQP H P ++P+
Sbjct: 1073 MSQFQSLTHQSPPQQNVQPKKQELRAASVVQPQPLVVVKEEKIHSPIIRSEPFSPSLRPE 1132
Query: 144 PPVHPMQ-----PLPPQPPLPPMFPMQP-LPPMLPDLTLEAWPSTDKTKRE 188
PP HP LP +P + P+ +P + P + P DK K+E
Sbjct: 1133 PPKHPESIKAPVHLPQRPEMKPVDVGRPVIRPPEQNAPPPGAPDKDKQKQE 1183
Score = 41.6 bits (96), Expect = 4e-04
Identities = 25/69 (36%), Positives = 27/69 (39%), Gaps = 14/69 (20%)
Query: 114 HHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPPMLPD 173
HHQ PA P QP P P QP P PP QP PP PP P +P
Sbjct: 742 HHQQMQQAPAPVPQQPPP---PPQQPPPPPPPQQQQQPPPPPPP-----------PSMPQ 787
Query: 174 LTLEAWPST 182
A S+
Sbjct: 788 QAAPAMKSS 796
Score = 40.4 bits (93), Expect = 0.001
Identities = 49/173 (28%), Positives = 57/173 (32%), Gaps = 57/173 (32%)
Query: 62 HHQII---PVLSQQHPPTHTLQPHHHIPVVPAQQ----PVIPQQPMMPVPGQHS------ 108
HHQ + P Q PP QP P QQ P P P P S
Sbjct: 742 HHQQMQQAPAPVPQQPPPPPQQPPPPPPPQQQQQPPPPPPPPSMPQQAAPAMKSSPPPFI 801
Query: 109 ---------------MTPIQHH-QP--NLPPPAQQPYQPQPVQ--PQPH----------- 137
PI H QP +LP P P+ PQP + PH
Sbjct: 802 ATQVPVLEPQLPGSVFDPIGHFTQPILHLPQPELPPHLPQPPEHSTPPHLNQHAVVSPPA 861
Query: 138 ----QPMQPQPPVHPMQPLPPQPPLPP-------MFPMQPLPPML--PDLTLE 177
P QP P + LPP+P PP P+ P PPM P + LE
Sbjct: 862 LHNALPQQPSRPSNRAAALPPKPARPPAVSPALTQTPLLPQPPMAQPPQVLLE 914
Score = 35.8 bits (81), Expect = 0.023
Identities = 32/106 (30%), Positives = 40/106 (37%), Gaps = 24/106 (22%)
Query: 71 QQHPPTHTLQPHHHIPVVP---AQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPP-PAQQP 126
Q +PP PH V P Q PV+ P P+ + P QP PP PA QP
Sbjct: 212 QPNPPPVQATPHPFPAVTPDLIVQTPVMTVVPPQPLQTPPPVPP----QPQPPPAPAPQP 267
Query: 127 YQPQP----VQPQPHQPMQ------------PQPPVHPMQPLPPQP 156
Q P PQP + + P+H LPP+P
Sbjct: 268 VQSHPPIIAATPQPVKTKKGVKRKADTTTPTTIDPIHEPPSLPPEP 313
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 57.4 bits (137), Expect = 7e-09
Identities = 31/69 (44%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 99 PMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPL 158
PM P PGQ P PPP QQ QP P QP P QP QPP HP QPP
Sbjct: 46 PMGPGPGQSGPKP----PIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPP 101
Query: 159 PPMFPMQPL 167
PP +P+
Sbjct: 102 PPQDSSKPV 110
Score = 45.8 bits (107), Expect = 2e-05
Identities = 45/137 (32%), Positives = 48/137 (35%), Gaps = 17/137 (12%)
Query: 46 RPPYPSYGYE----PMGGWLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMM 101
R P P G PMG P S PP PH P QQP PQQP
Sbjct: 32 RSPPPGMGLNQNRGPMGPG------PGQSGPKPPIPPPPPHQQQQQPPPQQPP-PQQPPP 84
Query: 102 PVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQ-PQPHQPMQPQPPVHPMQP--LPPQPPL 158
P H P H Q PPP Q +P Q P P + PP P PP
Sbjct: 85 HQPPPH---PQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGA 141
Query: 159 PPMFPMQPLPPMLPDLT 175
PP P P P +T
Sbjct: 142 PPGSGPGPTPTPPPAVT 158
Score = 42.0 bits (97), Expect = 3e-04
Identities = 34/116 (29%), Positives = 37/116 (31%), Gaps = 14/116 (12%)
Query: 67 PVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQP--------- 117
P QQ PP P P P P QQ P P Q S P+ P
Sbjct: 65 PHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSA 124
Query: 118 ----NLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPP 169
+ PPA P P P P P V P P PP PP + PP
Sbjct: 125 PPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAP-PPTPPSSGVPTTPP 179
Score = 39.7 bits (91), Expect = 0.002
Identities = 36/111 (32%), Positives = 39/111 (35%), Gaps = 15/111 (13%)
Query: 72 QHPPTHTLQPH-----HHIPVVPAQ---QPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPA 123
Q PP H PH P P Q +PV+ Q P P PG S P P PP
Sbjct: 80 QQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPG-PAPGVGSAPPASSSAPPATPPT 138
Query: 124 Q--QPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQ---PPLPPMFPMQPLPP 169
P P P + PP P P PP P PP P PP
Sbjct: 139 SGAPPGSGPGPTPTPPPAVTSAPPGAP-PPTPPSSGVPTTPPQAGGPPPPP 188
Score = 38.5 bits (88), Expect = 0.004
Identities = 22/61 (36%), Positives = 24/61 (39%), Gaps = 6/61 (9%)
Query: 115 HQPNLPPPA------QQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLP 168
H PPP + P P P Q P P+ P PP Q PPQ P P P P
Sbjct: 29 HDFRSPPPGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPP 88
Query: 169 P 169
P
Sbjct: 89 P 89
Score = 30.8 bits (68), Expect = 0.74
Identities = 26/87 (29%), Positives = 27/87 (31%), Gaps = 5/87 (5%)
Query: 74 PPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQ 133
PPT P P P + P PG TP P PP A P P
Sbjct: 136 PPTSGAPPGSGPGPTPTPPPAVTSAP----PGAPPPTPPSSGVPTTPPQAGGPPPPPAAV 191
Query: 134 PQPHQ-PMQPQPPVHPMQPLPPQPPLP 159
P P P Q P P P P P
Sbjct: 192 PGPGPGPKQGPGPGGPKGGKMPGGPKP 218
>gi|114431236 zinc finger protein 462 [Homo sapiens]
Length = 2506
Score = 55.1 bits (131), Expect = 4e-08
Identities = 30/62 (48%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 109 MTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPP-VHPMQPLPPQPPLPPMFPMQPL 167
+ P+Q QP PPP P P P QPQP Q QPQPP + P +PPQP P QP
Sbjct: 534 LDPLQQQQPPQPPPPPPP--PPPSQPQPLQ--QPQPPQLQPPHQVPPQPQTQPPPTQQPQ 589
Query: 168 PP 169
PP
Sbjct: 590 PP 591
Score = 44.3 bits (103), Expect = 6e-05
Identities = 32/67 (47%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 89 PAQQPVIPQQPMMPVPGQHSMT-PIQHHQP-NLPPPAQQPYQPQPVQPQPHQPMQPQPPV 146
P QQ PQ P P P S P+Q QP L PP Q P QPQ QP P Q QPQPP
Sbjct: 536 PLQQQQPPQPPPPPPPPPPSQPQPLQQPQPPQLQPPHQVPPQPQ-TQPPPTQ--QPQPPT 592
Query: 147 H--PMQP 151
P+ P
Sbjct: 593 QAAPLHP 599
Score = 43.5 bits (101), Expect = 1e-04
Identities = 28/67 (41%), Positives = 31/67 (46%), Gaps = 13/67 (19%)
Query: 93 PVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQ-QP-YQPQPVQPQPHQPMQPQPPVHPMQ 150
P+ QQP P P P PPP+Q QP QPQP Q QP + PQP P
Sbjct: 536 PLQQQQPPQPPP-----------PPPPPPPSQPQPLQQPQPPQLQPPHQVPPQPQTQPPP 584
Query: 151 PLPPQPP 157
PQPP
Sbjct: 585 TQQPQPP 591
Score = 36.2 bits (82), Expect = 0.018
Identities = 30/88 (34%), Positives = 36/88 (40%), Gaps = 11/88 (12%)
Query: 51 SYGYEPMGGWLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMP-VPGQHSM 109
SY + G ++ L QQ PP QP P P QP QQP P + H +
Sbjct: 519 SYESSSINGRKSGVMLDPLQQQQPP----QPPPPPPPPPPSQPQPLQQPQPPQLQPPHQV 574
Query: 110 TPIQHHQPNLPPPAQQPYQP---QPVQP 134
P QP PP QQP P P+ P
Sbjct: 575 PPQPQTQP---PPTQQPQPPTQAAPLHP 599
Score = 36.2 bits (82), Expect = 0.018
Identities = 16/33 (48%), Positives = 17/33 (51%)
Query: 139 PMQPQPPVHPMQPLPPQPPLPPMFPMQPLPPML 171
P+Q Q P P P PP PP P QP PP L
Sbjct: 536 PLQQQQPPQPPPPPPPPPPSQPQPLQQPQPPQL 568
Score = 33.5 bits (75), Expect = 0.11
Identities = 26/68 (38%), Positives = 30/68 (44%), Gaps = 9/68 (13%)
Query: 35 VLTPLKWYQSIRPPYPSYGYEPMGGWLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPV 94
+L PL+ Q +PP P P Q P L Q PP LQP H +P P QP
Sbjct: 533 MLDPLQQQQPPQPPPPPPPPPPS------QPQP-LQQPQPPQ--LQPPHQVPPQPQTQPP 583
Query: 95 IPQQPMMP 102
QQP P
Sbjct: 584 PTQQPQPP 591
Score = 33.5 bits (75), Expect = 0.11
Identities = 21/55 (38%), Positives = 23/55 (41%), Gaps = 7/55 (12%)
Query: 135 QPHQPMQPQPPVHPMQPLPPQP---PLPPMF----PMQPLPPMLPDLTLEAWPST 182
Q QP QP PP P P PQP P PP + P P P T + P T
Sbjct: 538 QQQQPPQPPPPPPPPPPSQPQPLQQPQPPQLQPPHQVPPQPQTQPPPTQQPQPPT 592
Score = 29.6 bits (65), Expect = 1.7
Identities = 13/28 (46%), Positives = 14/28 (50%)
Query: 145 PVHPMQPLPPQPPLPPMFPMQPLPPMLP 172
P+ QP P PP PP P QP P P
Sbjct: 536 PLQQQQPPQPPPPPPPPPPSQPQPLQQP 563
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 54.7 bits (130), Expect = 5e-08
Identities = 50/186 (26%), Positives = 65/186 (34%), Gaps = 20/186 (10%)
Query: 18 PLPPHPGHPGYINFSYEVLTPLKWYQSIR-------------PPYPSYGYEPMGGWLHHQ 64
P P GH GY Y TP ++ +++ P YG + G+
Sbjct: 408 PSGPQQGH-GYPGQPYGSQTPQRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQG 466
Query: 65 IIPVLSQQHP-PTHTLQPHHHIPV--VPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPP 121
P +QQ P P P+ P P QP QQP P S P QP+ PP
Sbjct: 467 QTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPP 526
Query: 122 PAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPPMLPDLTLEAWPS 181
Q P Q Q Q QPP Q Q P P QP P L P
Sbjct: 527 HQQSPAPYPSQQSTTQQHPQSQPPYSQPQ---AQSPYQQQQPQQPAPSTLSQQAAYPQPQ 583
Query: 182 TDKTKR 187
+ ++++
Sbjct: 584 SQQSQQ 589
Score = 45.8 bits (107), Expect = 2e-05
Identities = 45/161 (27%), Positives = 57/161 (35%), Gaps = 21/161 (13%)
Query: 12 GAAFAMPLPPHPGHPGYINFSYEVLTPLKWYQSIRPPY--PSYGYEPMGGWLHHQII--- 66
G ++ +PP+ G G + + TP QS P P Y +P H Q
Sbjct: 444 GLSYTQQIPPY-GQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQ 502
Query: 67 ------PVLSQQHPPTH---TLQPHHHIPV-VPAQQPVIPQQPMM--PVPGQHSMTPIQH 114
P L PP + PH P P+QQ Q P P + +P Q
Sbjct: 503 QPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQ 562
Query: 115 HQPNLPPP---AQQPYQPQPVQPQPHQPMQPQPPVHPMQPL 152
QP P P +QQ PQP Q Q Q P Q L
Sbjct: 563 QQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQEL 603
Score = 32.0 bits (71), Expect = 0.33
Identities = 28/84 (33%), Positives = 36/84 (42%), Gaps = 13/84 (15%)
Query: 89 PAQQPVIPQQPMM-PVPGQHSMTP-IQHHQPNLPPPAQQPYQPQPVQPQP------HQPM 140
P P P PM P P + P +Q+H P + PA P +P + P H M
Sbjct: 1553 PPYGPSAPVPPMTRPPPSNYQPPPSMQNHIPQVSSPAPLP-RPMENRTSPSKSPFLHSGM 1611
Query: 141 QPQ---PPVHPMQPLPPQPPLPPM 161
+ Q PPV P + P P PPM
Sbjct: 1612 KMQKAGPPV-PASHIAPAPVQPPM 1634
Score = 29.6 bits (65), Expect = 1.7
Identities = 26/92 (28%), Positives = 35/92 (38%), Gaps = 17/92 (18%)
Query: 67 PVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQP 126
PV PP QP P+ Q IPQ S P+ N P++ P
Sbjct: 1560 PVPPMTRPPPSNYQPP------PSMQNHIPQVS--------SPAPLPRPMENRTSPSKSP 1605
Query: 127 YQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPL 158
+ ++ Q P P P H + P P QPP+
Sbjct: 1606 FLHSGMKMQKAGP--PVPASH-IAPAPVQPPM 1634
Score = 28.5 bits (62), Expect = 3.7
Identities = 22/70 (31%), Positives = 25/70 (35%), Gaps = 11/70 (15%)
Query: 114 HHQPNLPPPAQQPYQPQPVQPQPHQP------MQPQP-----PVHPMQPLPPQPPLPPMF 162
HH P P + QP PQP P M+PQP P Q P P +
Sbjct: 358 HHAPMSPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGY 417
Query: 163 PMQPLPPMLP 172
P QP P
Sbjct: 418 PGQPYGSQTP 427
Score = 28.1 bits (61), Expect = 4.8
Identities = 18/64 (28%), Positives = 21/64 (32%), Gaps = 7/64 (10%)
Query: 89 PAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQ-------PYQPQPVQPQPHQPMQ 141
P +P M P P I H N AQ P PQ PQP +
Sbjct: 713 PLSPAAVPGNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALS 772
Query: 142 PQPP 145
P+ P
Sbjct: 773 PRQP 776
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 54.7 bits (130), Expect = 5e-08
Identities = 50/186 (26%), Positives = 65/186 (34%), Gaps = 20/186 (10%)
Query: 18 PLPPHPGHPGYINFSYEVLTPLKWYQSIR-------------PPYPSYGYEPMGGWLHHQ 64
P P GH GY Y TP ++ +++ P YG + G+
Sbjct: 408 PSGPQQGH-GYPGQPYGSQTPQRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQG 466
Query: 65 IIPVLSQQHP-PTHTLQPHHHIPV--VPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPP 121
P +QQ P P P+ P P QP QQP P S P QP+ PP
Sbjct: 467 QTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPP 526
Query: 122 PAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPPMLPDLTLEAWPS 181
Q P Q Q Q QPP Q Q P P QP P L P
Sbjct: 527 HQQSPAPYPSQQSTTQQHPQSQPPYSQPQ---AQSPYQQQQPQQPAPSTLSQQAAYPQPQ 583
Query: 182 TDKTKR 187
+ ++++
Sbjct: 584 SQQSQQ 589
Score = 45.8 bits (107), Expect = 2e-05
Identities = 45/161 (27%), Positives = 57/161 (35%), Gaps = 21/161 (13%)
Query: 12 GAAFAMPLPPHPGHPGYINFSYEVLTPLKWYQSIRPPY--PSYGYEPMGGWLHHQII--- 66
G ++ +PP+ G G + + TP QS P P Y +P H Q
Sbjct: 444 GLSYTQQIPPY-GQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQ 502
Query: 67 ------PVLSQQHPPTH---TLQPHHHIPV-VPAQQPVIPQQPMM--PVPGQHSMTPIQH 114
P L PP + PH P P+QQ Q P P + +P Q
Sbjct: 503 QPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQ 562
Query: 115 HQPNLPPP---AQQPYQPQPVQPQPHQPMQPQPPVHPMQPL 152
QP P P +QQ PQP Q Q Q P Q L
Sbjct: 563 QQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQEL 603
Score = 28.5 bits (62), Expect = 3.7
Identities = 22/70 (31%), Positives = 25/70 (35%), Gaps = 11/70 (15%)
Query: 114 HHQPNLPPPAQQPYQPQPVQPQPHQP------MQPQP-----PVHPMQPLPPQPPLPPMF 162
HH P P + QP PQP P M+PQP P Q P P +
Sbjct: 358 HHAPMSPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGY 417
Query: 163 PMQPLPPMLP 172
P QP P
Sbjct: 418 PGQPYGSQTP 427
Score = 28.1 bits (61), Expect = 4.8
Identities = 18/64 (28%), Positives = 21/64 (32%), Gaps = 7/64 (10%)
Query: 89 PAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQ-------PYQPQPVQPQPHQPMQ 141
P +P M P P I H N AQ P PQ PQP +
Sbjct: 713 PLSPAAVPGNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALS 772
Query: 142 PQPP 145
P+ P
Sbjct: 773 PRQP 776
Score = 28.1 bits (61), Expect = 4.8
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 7/66 (10%)
Query: 102 PVPGQHSMTPIQHHQPNLPPPAQQPYQPQPV---QPQPHQPMQPQ---PPVHPMQPLPPQ 155
P P Q + Q Q + P P +P + + P H M+ Q PPV P + P
Sbjct: 1353 PFPSQQTTMYQQQQQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPV-PASHIAPA 1411
Query: 156 PPLPPM 161
P PPM
Sbjct: 1412 PVQPPM 1417
Score = 27.3 bits (59), Expect = 8.2
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 7/70 (10%)
Query: 89 PAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHP 148
P+QQ + QQ S P+ N P++ P+ ++ Q P P P H
Sbjct: 1355 PSQQTTMYQQQQQV----SSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGP--PVPASH- 1407
Query: 149 MQPLPPQPPL 158
+ P P QPP+
Sbjct: 1408 IAPAPVQPPM 1417
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 54.3 bits (129), Expect = 6e-08
Identities = 34/87 (39%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Query: 87 VVPAQQPVIPQQPMMPVPGQHSMTPIQHHQP--NLPPPAQQPYQPQ-PVQPQPHQPMQPQ 143
V PA P P +P PG TP P P +Q P QPQ P P PH +Q
Sbjct: 193 VTPAPSSAPPGTPQLPTPGP---TPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQA 249
Query: 144 PPVHPMQPLPPQPPLPPMFPMQPLPPM 170
P +HP +P P PP P P PL P+
Sbjct: 250 PALHPQRPPSPHPP-PHPSPHPPLQPL 275
Score = 47.4 bits (111), Expect = 8e-06
Identities = 40/110 (36%), Positives = 44/110 (40%), Gaps = 16/110 (14%)
Query: 75 PTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQH-SMTPIQHHQ-PNLPPPAQQPYQPQPV 132
P+ T P P +Q P PQ P PVP H P H Q P P P P P+
Sbjct: 214 PSATAVPPQGSPTA-SQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPL 272
Query: 133 QP------QPHQPMQPQPPVHPMQPLPPQ-----PPLPPMFPMQP--LPP 169
QP QP P QPP+H P P P L P QP LPP
Sbjct: 273 QPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPP 322
Score = 47.4 bits (111), Expect = 8e-06
Identities = 37/125 (29%), Positives = 48/125 (38%), Gaps = 16/125 (12%)
Query: 74 PPTHTL------QPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQ-HHQPNL-PPPAQQ 125
PPT + Q H H P + P + P P ++ + HH P+ PPP Q
Sbjct: 377 PPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQL 436
Query: 126 PYQPQPVQPQPHQP--------MQPQPPVHPMQPLPPQPPLPPMFPMQPLPPMLPDLTLE 177
Q QP+ P QP + P P HP L P PP +P P +T
Sbjct: 437 MPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITPP 496
Query: 178 AWPST 182
PST
Sbjct: 497 TCPST 501
Score = 47.0 bits (110), Expect = 1e-05
Identities = 32/100 (32%), Positives = 38/100 (38%), Gaps = 10/100 (10%)
Query: 75 PTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQP 134
P +L HH P ++PQ P+P + P NLPPP P P
Sbjct: 417 PLSSLSTHHPPSAHPPPLQLMPQS--QPLPSSPAQPPGLTQSQNLPPP------PASHPP 468
Query: 135 QPHQPMQPQPPV--HPMQPLPPQPPLPPMFPMQPLPPMLP 172
+ PQPP HP P P P PP P PP P
Sbjct: 469 TGLHQVAPQPPFAQHPFVPGGPPPITPPTCPSTSTPPAGP 508
Score = 45.4 bits (106), Expect = 3e-05
Identities = 53/181 (29%), Positives = 63/181 (34%), Gaps = 51/181 (28%)
Query: 16 AMPLPPHPGHPGYINFSYEVLTPLKWYQSIRPPYPSYGYEPMG-----GWLHHQI-IPV- 68
A PL HPG P PP S G P+G + H + +P
Sbjct: 305 AGPLLQHPGPPQPFGL---------------PPQASQGQAPLGTSPAAAYPHTSLQLPAS 349
Query: 69 ---LSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNL------ 119
L Q PP QP +P P P I P P+P Q H P+L
Sbjct: 350 QSALQSQQPPRE--QP---LPPAPLAMPHIKPPPTTPIP-QLPAPQAHKHPPHLSGPSPF 403
Query: 120 -------PPPAQQPYQPQPVQPQPHQPMQPQPPVHPM---QPLPPQPPLPP-MFPMQPLP 168
PPPA +P H P PP+ M QPLP P PP + Q LP
Sbjct: 404 SMNANLPPPPALKPLSSLSTH---HPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLP 460
Query: 169 P 169
P
Sbjct: 461 P 461
Score = 42.0 bits (97), Expect = 3e-04
Identities = 44/143 (30%), Positives = 50/143 (34%), Gaps = 39/143 (27%)
Query: 62 HHQIIPVLSQQHPPTHTLQPHH--HIPVVP----AQQPVIPQQPMMPVPGQHSMTPIQHH 115
H Q P L Q PP+ PH H P+ P A QP P P+ GQ P H
Sbjct: 245 HIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGP---H 301
Query: 116 QPNLPPPAQQPYQPQP--VQPQ----------------PHQPMQ----------PQPPVH 147
P Q P PQP + PQ PH +Q QPP
Sbjct: 302 SLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPRE 361
Query: 148 PMQPLPPQPPLPPMFPMQPLPPM 170
QPLPP P P P P+
Sbjct: 362 --QPLPPAPLAMPHIKPPPTTPI 382
Score = 42.0 bits (97), Expect = 3e-04
Identities = 33/90 (36%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 73 HPPTHTLQPHHH-IPVVPAQQPVIPQ-QPMMPVPGQHSMTPIQHHQPNLPPPAQQPY--- 127
HPP L P +P PAQ P + Q Q + P P H T + P PP AQ P+
Sbjct: 430 HPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQ-PPFAQHPFVPG 488
Query: 128 QPQPVQPQPHQPMQPQPPVHPMQPLPPQPP 157
P P+ P P P PP P QPP
Sbjct: 489 GPPPITP-PTCPSTSTPPAGP--GTSAQPP 515
Score = 41.2 bits (95), Expect = 5e-04
Identities = 45/125 (36%), Positives = 50/125 (40%), Gaps = 18/125 (14%)
Query: 47 PPYPSYGYEPMGGWLHHQIIPVLSQ--QHPPTHTLQ-PHHHIPVVPAQQPVIPQQPMMPV 103
P P+ G P + Q P SQ P T PH HI PA P Q+P P
Sbjct: 205 PQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHP---QRPPSPH 261
Query: 104 PGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQ-------PLPPQP 156
P H +P QP L A QP P QP H P P H +Q P PPQP
Sbjct: 262 PPPHP-SPHPPLQP-LTGSAGQPSAPSHAQPPLHGQGPPGP--HSLQAGPLLQHPGPPQP 317
Query: 157 -PLPP 160
LPP
Sbjct: 318 FGLPP 322
Score = 37.0 bits (84), Expect = 0.010
Identities = 50/175 (28%), Positives = 61/175 (34%), Gaps = 37/175 (21%)
Query: 20 PPHPG-HPGYINFSYEVLTPLKWYQSIRPPYPSYGYEPMGGW-----LHHQIIPVLSQQH 73
PPHP HP L PL +P PS+ P+ G Q P+L
Sbjct: 263 PPHPSPHPP--------LQPLTGSAG-QPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPG 313
Query: 74 PPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTP-----IQHHQPNLPPPAQQPYQ 128
PP QP P Q + P P P +Q Q PP +QP
Sbjct: 314 PP----QPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQ----PPREQPLP 365
Query: 129 PQP-----VQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQ---PLPPMLPDLT 175
P P ++P P P+ PQ P PP P F M P PP L L+
Sbjct: 366 PAPLAMPHIKPPPTTPI-PQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLS 419
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 54.3 bits (129), Expect = 6e-08
Identities = 34/87 (39%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Query: 87 VVPAQQPVIPQQPMMPVPGQHSMTPIQHHQP--NLPPPAQQPYQPQ-PVQPQPHQPMQPQ 143
V PA P P +P PG TP P P +Q P QPQ P P PH +Q
Sbjct: 747 VTPAPSSAPPGTPQLPTPGP---TPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQA 803
Query: 144 PPVHPMQPLPPQPPLPPMFPMQPLPPM 170
P +HP +P P PP P P PL P+
Sbjct: 804 PALHPQRPPSPHPP-PHPSPHPPLQPL 829
Score = 47.4 bits (111), Expect = 8e-06
Identities = 40/110 (36%), Positives = 44/110 (40%), Gaps = 16/110 (14%)
Query: 75 PTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQH-SMTPIQHHQ-PNLPPPAQQPYQPQPV 132
P+ T P P +Q P PQ P PVP H P H Q P P P P P+
Sbjct: 768 PSATAVPPQGSPTA-SQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPL 826
Query: 133 QP------QPHQPMQPQPPVHPMQPLPPQ-----PPLPPMFPMQP--LPP 169
QP QP P QPP+H P P P L P QP LPP
Sbjct: 827 QPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPP 876
Score = 47.4 bits (111), Expect = 8e-06
Identities = 37/125 (29%), Positives = 48/125 (38%), Gaps = 16/125 (12%)
Query: 74 PPTHTL------QPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQ-HHQPNL-PPPAQQ 125
PPT + Q H H P + P + P P ++ + HH P+ PPP Q
Sbjct: 931 PPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQL 990
Query: 126 PYQPQPVQPQPHQP--------MQPQPPVHPMQPLPPQPPLPPMFPMQPLPPMLPDLTLE 177
Q QP+ P QP + P P HP L P PP +P P +T
Sbjct: 991 MPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITPP 1050
Query: 178 AWPST 182
PST
Sbjct: 1051 TCPST 1055
Score = 47.0 bits (110), Expect = 1e-05
Identities = 32/100 (32%), Positives = 38/100 (38%), Gaps = 10/100 (10%)
Query: 75 PTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQP 134
P +L HH P ++PQ P+P + P NLPPP P P
Sbjct: 971 PLSSLSTHHPPSAHPPPLQLMPQS--QPLPSSPAQPPGLTQSQNLPPP------PASHPP 1022
Query: 135 QPHQPMQPQPPV--HPMQPLPPQPPLPPMFPMQPLPPMLP 172
+ PQPP HP P P P PP P PP P
Sbjct: 1023 TGLHQVAPQPPFAQHPFVPGGPPPITPPTCPSTSTPPAGP 1062
Score = 45.4 bits (106), Expect = 3e-05
Identities = 53/181 (29%), Positives = 63/181 (34%), Gaps = 51/181 (28%)
Query: 16 AMPLPPHPGHPGYINFSYEVLTPLKWYQSIRPPYPSYGYEPMG-----GWLHHQI-IPV- 68
A PL HPG P PP S G P+G + H + +P
Sbjct: 859 AGPLLQHPGPPQPFGL---------------PPQASQGQAPLGTSPAAAYPHTSLQLPAS 903
Query: 69 ---LSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNL------ 119
L Q PP QP +P P P I P P+P Q H P+L
Sbjct: 904 QSALQSQQPPRE--QP---LPPAPLAMPHIKPPPTTPIP-QLPAPQAHKHPPHLSGPSPF 957
Query: 120 -------PPPAQQPYQPQPVQPQPHQPMQPQPPVHPM---QPLPPQPPLPP-MFPMQPLP 168
PPPA +P H P PP+ M QPLP P PP + Q LP
Sbjct: 958 SMNANLPPPPALKPLSSLSTH---HPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLP 1014
Query: 169 P 169
P
Sbjct: 1015 P 1015
Score = 42.0 bits (97), Expect = 3e-04
Identities = 44/143 (30%), Positives = 50/143 (34%), Gaps = 39/143 (27%)
Query: 62 HHQIIPVLSQQHPPTHTLQPHH--HIPVVP----AQQPVIPQQPMMPVPGQHSMTPIQHH 115
H Q P L Q PP+ PH H P+ P A QP P P+ GQ P H
Sbjct: 799 HIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGP---H 855
Query: 116 QPNLPPPAQQPYQPQP--VQPQ----------------PHQPMQ----------PQPPVH 147
P Q P PQP + PQ PH +Q QPP
Sbjct: 856 SLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPRE 915
Query: 148 PMQPLPPQPPLPPMFPMQPLPPM 170
QPLPP P P P P+
Sbjct: 916 --QPLPPAPLAMPHIKPPPTTPI 936
Score = 42.0 bits (97), Expect = 3e-04
Identities = 33/90 (36%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 73 HPPTHTLQPHHH-IPVVPAQQPVIPQ-QPMMPVPGQHSMTPIQHHQPNLPPPAQQPY--- 127
HPP L P +P PAQ P + Q Q + P P H T + P PP AQ P+
Sbjct: 984 HPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQ-PPFAQHPFVPG 1042
Query: 128 QPQPVQPQPHQPMQPQPPVHPMQPLPPQPP 157
P P+ P P P PP P QPP
Sbjct: 1043 GPPPITP-PTCPSTSTPPAGP--GTSAQPP 1069
Score = 41.2 bits (95), Expect = 5e-04
Identities = 45/125 (36%), Positives = 50/125 (40%), Gaps = 18/125 (14%)
Query: 47 PPYPSYGYEPMGGWLHHQIIPVLSQ--QHPPTHTLQ-PHHHIPVVPAQQPVIPQQPMMPV 103
P P+ G P + Q P SQ P T PH HI PA P Q+P P
Sbjct: 759 PQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHP---QRPPSPH 815
Query: 104 PGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQ-------PLPPQP 156
P H +P QP L A QP P QP H P P H +Q P PPQP
Sbjct: 816 PPPHP-SPHPPLQP-LTGSAGQPSAPSHAQPPLHGQGPPGP--HSLQAGPLLQHPGPPQP 871
Query: 157 -PLPP 160
LPP
Sbjct: 872 FGLPP 876
Score = 37.0 bits (84), Expect = 0.010
Identities = 50/175 (28%), Positives = 61/175 (34%), Gaps = 37/175 (21%)
Query: 20 PPHPG-HPGYINFSYEVLTPLKWYQSIRPPYPSYGYEPMGGW-----LHHQIIPVLSQQH 73
PPHP HP L PL +P PS+ P+ G Q P+L
Sbjct: 817 PPHPSPHPP--------LQPLTGSAG-QPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPG 867
Query: 74 PPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTP-----IQHHQPNLPPPAQQPYQ 128
PP QP P Q + P P P +Q Q PP +QP
Sbjct: 868 PP----QPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQ----PPREQPLP 919
Query: 129 PQP-----VQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQ---PLPPMLPDLT 175
P P ++P P P+ PQ P PP P F M P PP L L+
Sbjct: 920 PAPLAMPHIKPPPTTPI-PQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLS 973
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 54.3 bits (129), Expect = 6e-08
Identities = 34/87 (39%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Query: 87 VVPAQQPVIPQQPMMPVPGQHSMTPIQHHQP--NLPPPAQQPYQPQ-PVQPQPHQPMQPQ 143
V PA P P +P PG TP P P +Q P QPQ P P PH +Q
Sbjct: 747 VTPAPSSAPPGTPQLPTPGP---TPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQA 803
Query: 144 PPVHPMQPLPPQPPLPPMFPMQPLPPM 170
P +HP +P P PP P P PL P+
Sbjct: 804 PALHPQRPPSPHPP-PHPSPHPPLQPL 829
Score = 47.4 bits (111), Expect = 8e-06
Identities = 40/110 (36%), Positives = 44/110 (40%), Gaps = 16/110 (14%)
Query: 75 PTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQH-SMTPIQHHQ-PNLPPPAQQPYQPQPV 132
P+ T P P +Q P PQ P PVP H P H Q P P P P P+
Sbjct: 768 PSATAVPPQGSPTA-SQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPL 826
Query: 133 QP------QPHQPMQPQPPVHPMQPLPPQ-----PPLPPMFPMQP--LPP 169
QP QP P QPP+H P P P L P QP LPP
Sbjct: 827 QPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPP 876
Score = 47.4 bits (111), Expect = 8e-06
Identities = 37/125 (29%), Positives = 48/125 (38%), Gaps = 16/125 (12%)
Query: 74 PPTHTL------QPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQ-HHQPNL-PPPAQQ 125
PPT + Q H H P + P + P P ++ + HH P+ PPP Q
Sbjct: 931 PPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQL 990
Query: 126 PYQPQPVQPQPHQP--------MQPQPPVHPMQPLPPQPPLPPMFPMQPLPPMLPDLTLE 177
Q QP+ P QP + P P HP L P PP +P P +T
Sbjct: 991 MPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITPP 1050
Query: 178 AWPST 182
PST
Sbjct: 1051 TCPST 1055
Score = 47.0 bits (110), Expect = 1e-05
Identities = 32/100 (32%), Positives = 38/100 (38%), Gaps = 10/100 (10%)
Query: 75 PTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQP 134
P +L HH P ++PQ P+P + P NLPPP P P
Sbjct: 971 PLSSLSTHHPPSAHPPPLQLMPQS--QPLPSSPAQPPGLTQSQNLPPP------PASHPP 1022
Query: 135 QPHQPMQPQPPV--HPMQPLPPQPPLPPMFPMQPLPPMLP 172
+ PQPP HP P P P PP P PP P
Sbjct: 1023 TGLHQVAPQPPFAQHPFVPGGPPPITPPTCPSTSTPPAGP 1062
Score = 45.4 bits (106), Expect = 3e-05
Identities = 53/181 (29%), Positives = 63/181 (34%), Gaps = 51/181 (28%)
Query: 16 AMPLPPHPGHPGYINFSYEVLTPLKWYQSIRPPYPSYGYEPMG-----GWLHHQI-IPV- 68
A PL HPG P PP S G P+G + H + +P
Sbjct: 859 AGPLLQHPGPPQPFGL---------------PPQASQGQAPLGTSPAAAYPHTSLQLPAS 903
Query: 69 ---LSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNL------ 119
L Q PP QP +P P P I P P+P Q H P+L
Sbjct: 904 QSALQSQQPPRE--QP---LPPAPLAMPHIKPPPTTPIP-QLPAPQAHKHPPHLSGPSPF 957
Query: 120 -------PPPAQQPYQPQPVQPQPHQPMQPQPPVHPM---QPLPPQPPLPP-MFPMQPLP 168
PPPA +P H P PP+ M QPLP P PP + Q LP
Sbjct: 958 SMNANLPPPPALKPLSSLSTH---HPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLP 1014
Query: 169 P 169
P
Sbjct: 1015 P 1015
Score = 42.0 bits (97), Expect = 3e-04
Identities = 44/143 (30%), Positives = 50/143 (34%), Gaps = 39/143 (27%)
Query: 62 HHQIIPVLSQQHPPTHTLQPHH--HIPVVP----AQQPVIPQQPMMPVPGQHSMTPIQHH 115
H Q P L Q PP+ PH H P+ P A QP P P+ GQ P H
Sbjct: 799 HIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGP---H 855
Query: 116 QPNLPPPAQQPYQPQP--VQPQ----------------PHQPMQ----------PQPPVH 147
P Q P PQP + PQ PH +Q QPP
Sbjct: 856 SLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPRE 915
Query: 148 PMQPLPPQPPLPPMFPMQPLPPM 170
QPLPP P P P P+
Sbjct: 916 --QPLPPAPLAMPHIKPPPTTPI 936
Score = 42.0 bits (97), Expect = 3e-04
Identities = 33/90 (36%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 73 HPPTHTLQPHHH-IPVVPAQQPVIPQ-QPMMPVPGQHSMTPIQHHQPNLPPPAQQPY--- 127
HPP L P +P PAQ P + Q Q + P P H T + P PP AQ P+
Sbjct: 984 HPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQ-PPFAQHPFVPG 1042
Query: 128 QPQPVQPQPHQPMQPQPPVHPMQPLPPQPP 157
P P+ P P P PP P QPP
Sbjct: 1043 GPPPITP-PTCPSTSTPPAGP--GTSAQPP 1069
Score = 41.2 bits (95), Expect = 5e-04
Identities = 45/125 (36%), Positives = 50/125 (40%), Gaps = 18/125 (14%)
Query: 47 PPYPSYGYEPMGGWLHHQIIPVLSQ--QHPPTHTLQ-PHHHIPVVPAQQPVIPQQPMMPV 103
P P+ G P + Q P SQ P T PH HI PA P Q+P P
Sbjct: 759 PQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHP---QRPPSPH 815
Query: 104 PGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQ-------PLPPQP 156
P H +P QP L A QP P QP H P P H +Q P PPQP
Sbjct: 816 PPPHP-SPHPPLQP-LTGSAGQPSAPSHAQPPLHGQGPPGP--HSLQAGPLLQHPGPPQP 871
Query: 157 -PLPP 160
LPP
Sbjct: 872 FGLPP 876
Score = 37.0 bits (84), Expect = 0.010
Identities = 50/175 (28%), Positives = 61/175 (34%), Gaps = 37/175 (21%)
Query: 20 PPHPG-HPGYINFSYEVLTPLKWYQSIRPPYPSYGYEPMGGW-----LHHQIIPVLSQQH 73
PPHP HP L PL +P PS+ P+ G Q P+L
Sbjct: 817 PPHPSPHPP--------LQPLTGSAG-QPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPG 867
Query: 74 PPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTP-----IQHHQPNLPPPAQQPYQ 128
PP QP P Q + P P P +Q Q PP +QP
Sbjct: 868 PP----QPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQ----PPREQPLP 919
Query: 129 PQP-----VQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQ---PLPPMLPDLT 175
P P ++P P P+ PQ P PP P F M P PP L L+
Sbjct: 920 PAPLAMPHIKPPPTTPI-PQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLS 973
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 54.3 bits (129), Expect = 6e-08
Identities = 43/137 (31%), Positives = 54/137 (39%), Gaps = 12/137 (8%)
Query: 38 PLKWYQSIRPPYPSYGYEPMGGWLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQ 97
P Y + PP P+ + L ++P P + P PV+P P
Sbjct: 519 PFVPYSQMPPPLPTMPPPVLPPSLPPPVMPPALPATVPPPGMPP----PVMPPSLPTSVP 574
Query: 98 QPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPL---PP 154
P MP P S P P LPPP+ P PV P P PPV P+ PL P
Sbjct: 575 PPGMP-PSLSSAGP----PPVLPPPSLSSAGPPPVLPPPSLSSTAPPPVMPLPPLSSATP 629
Query: 155 QPPLPPMFPMQPLPPML 171
P +PP Q +PP L
Sbjct: 630 PPGIPPPGVPQGIPPQL 646
Score = 51.6 bits (122), Expect = 4e-07
Identities = 43/134 (32%), Positives = 49/134 (36%), Gaps = 19/134 (14%)
Query: 44 SIRPPYPSYGYEPMGGWLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPV 103
S+ PP+ Y P P L PP L P PV+P P P MP
Sbjct: 515 SMPPPFVPYSQMP----------PPLPTMPPPV--LPPSLPPPVMPPALPATVPPPGMPP 562
Query: 104 PGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPL-----PPQPPL 158
P P P +PP P PV P P PPV P L PP PL
Sbjct: 563 PVMPPSLPTSVPPPGMPPSLSSA-GPPPVLPPPSLSSAGPPPVLPPPSLSSTAPPPVMPL 621
Query: 159 PPMFPMQPLPPMLP 172
PP+ P PP +P
Sbjct: 622 PPLSSATP-PPGIP 634
Score = 44.7 bits (104), Expect = 5e-05
Identities = 39/124 (31%), Positives = 46/124 (37%), Gaps = 34/124 (27%)
Query: 79 LQPHHHIPVVPAQQPVI-----------PQQPMMPVPG--------QHSMTPIQHHQPNL 119
LQPHH +P P P + P PM P PG Q + HHQ +
Sbjct: 76 LQPHH-LPPPPLPPPPVMPGGGYGDWQPPPPPMPPPPGPALSYQKQQQYKHQMLHHQRDG 134
Query: 120 PP-----PAQQPYQPQPVQPQPHQPMQ------PQPPVHPMQPLPPQPPLPPMFPMQPLP 168
PP + P + PV P + P PQPP P QP LP P QP P
Sbjct: 135 PPGLVPMELESPPESPPVPPGSYMPPSQSYMPPPQPPPSYYPPTSSQPYLP---PAQPSP 191
Query: 169 PMLP 172
P
Sbjct: 192 SQSP 195
Score = 43.5 bits (101), Expect = 1e-04
Identities = 45/164 (27%), Positives = 57/164 (34%), Gaps = 31/164 (18%)
Query: 20 PPHPGHPGYINFSYEVLTPLKWYQSIRPPYPSYGYEPMGGWLHHQIIPVLSQQHPPTHTL 79
P P G+++F + L L+ Q + Q+ VL H P L
Sbjct: 42 PAAPSSSGFMSFREQHLAQLQQLQQMH---------------QKQMQCVLQPHHLPPPPL 86
Query: 80 QPHHHIPVVPAQ-----QPVIPQQPMMPVPG------QHSMTPIQHHQPNLPPPAQQPYQ 128
P PV+P QP P P P P Q + HHQ + PP
Sbjct: 87 PPP---PVMPGGGYGDWQPPPPPMPPPPGPALSYQKQQQYKHQMLHHQRDGPPGLVPMEL 143
Query: 129 PQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPPMLP 172
P + P P PP P PPQPP P +P P LP
Sbjct: 144 ESPPESPPVPPGSYMPPSQSYMP-PPQPP-PSYYPPTSSQPYLP 185
Score = 43.5 bits (101), Expect = 1e-04
Identities = 33/94 (35%), Positives = 41/94 (43%), Gaps = 15/94 (15%)
Query: 86 PVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPP 145
P VP Q + P P MP P + P P+LPPP P P V P P P P
Sbjct: 519 PFVPYSQ-MPPPLPTMPPP----VLP-----PSLPPPVMPPALPATVPP----PGMPPPV 564
Query: 146 VHPMQPLPPQPP-LPPMFPMQPLPPMLPDLTLEA 178
+ P P PP +PP PP+LP +L +
Sbjct: 565 MPPSLPTSVPPPGMPPSLSSAGPPPVLPPPSLSS 598
Score = 39.7 bits (91), Expect = 0.002
Identities = 24/64 (37%), Positives = 28/64 (43%), Gaps = 7/64 (10%)
Query: 117 PNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPPMLPDLTL 176
P +PPP P P PV P P P PP +PP P +PP P PP +P
Sbjct: 531 PTMPPPVLPPSLPPPVMP-PALPATVPPP-----GMPP-PVMPPSLPTSVPPPGMPPSLS 583
Query: 177 EAWP 180
A P
Sbjct: 584 SAGP 587
Score = 39.3 bits (90), Expect = 0.002
Identities = 24/86 (27%), Positives = 34/86 (39%), Gaps = 9/86 (10%)
Query: 103 VPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPP--------VHPMQPLPP 154
+P Q S +P + PP P P+ P ++P P P P+PP
Sbjct: 1489 LPPQESRLQNTSSRPGMYPPPGSYRPPPPMGKPPGSIVRPSAPPARSSVPVTRPPVPIPP 1548
Query: 155 QPPLPPMFPMQP-LPPMLPDLTLEAW 179
PP PP+ P P + P + E W
Sbjct: 1549 PPPPPPLPPPPPVIKPQTSAVEQERW 1574
Score = 37.4 bits (85), Expect = 0.008
Identities = 40/166 (24%), Positives = 56/166 (33%), Gaps = 24/166 (14%)
Query: 26 PGYINFSYEVLTPLKWYQSIRPPYPSYGYEPMGGWLHHQIIPVLSQQHPPTHTLQPHHHI 85
P Y + S + L QS P + P G Q++ PP +
Sbjct: 205 PSYSSSSSSSQSYLSHSQSYLPSSQASPSRPSQGHSKSQLLAPPPPSAPPGNKTTVQQEP 264
Query: 86 PVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQ---------------PNLPPPAQQPY--- 127
A+ QQ P P +MTP + Q +LP + P
Sbjct: 265 LESGAKNKSTEQQQAAPEPDPSTMTPQEQQQYWYRQHLLSLQQRTKVHLPGHKKGPVVAK 324
Query: 128 -QPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPPMLP 172
P+PV+ + P Q P P PP PP P + +PP LP
Sbjct: 325 DTPEPVKEEVTVPATSQVPESPSSEEPPLPP-----PNEEVPPPLP 365
Score = 33.5 bits (75), Expect = 0.11
Identities = 32/98 (32%), Positives = 39/98 (39%), Gaps = 20/98 (20%)
Query: 67 PVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQP 126
P LS PP L P P+ P P+MP+P S TP P +PPP
Sbjct: 594 PSLSSAGPPP-VLPP-------PSLSSTAPP-PVMPLPPLSSATP----PPGIPPPG--- 637
Query: 127 YQPQPVQPQPHQPMQPQPPVHPMQPLP-PQPPLPPMFP 163
PQ + PQ P PP Q P+ P P + P
Sbjct: 638 -VPQGIPPQ--LTAAPVPPASSSQSSQVPEKPRPALLP 672
Score = 32.7 bits (73), Expect = 0.20
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 3/46 (6%)
Query: 127 YQPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPPMLP 172
Y P P P PP P P P LPP P +PP LP
Sbjct: 510 YMGNMSMPPPFVPYSQMPPPLPTM---PPPVLPPSLPPPVMPPALP 552
Score = 31.2 bits (69), Expect = 0.57
Identities = 34/105 (32%), Positives = 43/105 (40%), Gaps = 23/105 (21%)
Query: 82 HHHIPVVPAQQPV-IPQQPMMPVPGQHSMTPIQHHQPNLPPPA-------QQPYQPQPVQ 133
H+ P VP PV +P+ P PG S T P P + Q Q Q +Q
Sbjct: 13 HYPPPPVPPPPPVALPEAS--PGPGYSSSTT-----PAAPSSSGFMSFREQHLAQLQQLQ 65
Query: 134 PQPHQPMQPQPPVHPMQPLPPQPPLPPMFP------MQPLPPMLP 172
+ MQ H + P PP PP PP+ P QP PP +P
Sbjct: 66 QMHQKQMQCVLQPHHLPP-PPLPP-PPVMPGGGYGDWQPPPPPMP 108
Score = 30.8 bits (68), Expect = 0.74
Identities = 24/83 (28%), Positives = 28/83 (33%), Gaps = 4/83 (4%)
Query: 74 PPTHTLQPHHHIPVVPAQQPVIPQQPMMPVP----GQHSMTPIQHHQPNLPPPAQQPYQP 129
PP + P IP Q + PQ PVP Q S P + LP P P
Sbjct: 622 PPLSSATPPPGIPPPGVPQGIPPQLTAAPVPPASSSQSSQVPEKPRPALLPTPVSFGSAP 681
Query: 130 QPVQPQPHQPMQPQPPVHPMQPL 152
P Q P V+ PL
Sbjct: 682 PTTYHPPLQSAGPSEQVNSKAPL 704
Score = 30.8 bits (68), Expect = 0.74
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 136 PHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPP 169
P P+ P PPVH +PP P+P P PP
Sbjct: 1603 PSAPVLPPPPVH--SSIPPPGPVPMGMPPMSKPP 1634
Score = 30.4 bits (67), Expect = 0.97
Identities = 39/174 (22%), Positives = 59/174 (33%), Gaps = 48/174 (27%)
Query: 18 PLPPHPGHPGYINFSYEVLTPLKWYQSIRPPYPSYGYEPMGGW----LHHQ------IIP 67
PLPP P PG ++ P PP P+ Y+ + LHHQ ++P
Sbjct: 85 PLPPPPVMPGGGYGDWQPPPP----PMPPPPGPALSYQKQQQYKHQMLHHQRDGPPGLVP 140
Query: 68 VLSQQHPPTHTLQPHHHIPVV----------PAQQPVIPQQPMMPV---------PGQHS 108
+ + P + + P ++P P+ P QP +P P Q
Sbjct: 141 MELESPPESPPVPPGSYMPPSQSYMPPPQPPPSYYPPTSSQPYLPPAQPSPSQSPPSQSY 200
Query: 109 MTP--------------IQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQPPVHP 148
+ P + H Q LP P +P + Q + P PP P
Sbjct: 201 LAPTPSYSSSSSSSQSYLSHSQSYLPSSQASPSRPSQGHSK-SQLLAPPPPSAP 253
Score = 29.3 bits (64), Expect = 2.2
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 6/82 (7%)
Query: 60 WLHHQIIPVLSQQHPPTHTLQPHHHIPVVPAQQPV-IPQQPMMPVPGQHSMTPIQHHQPN 118
W ++ + QQ H L H PVV P + ++ +P Q +P +P
Sbjct: 297 WYRQHLLSL--QQRTKVH-LPGHKKGPVVAKDTPEPVKEEVTVPATSQVPESP-SSEEPP 352
Query: 119 LPPPAQQPYQP-QPVQPQPHQP 139
LPPP ++ P P +PQ P
Sbjct: 353 LPPPNEEVPPPLPPEEPQSEDP 374
Score = 27.7 bits (60), Expect = 6.3
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 138 QPMQPQPPVHPMQPLPPQPPLPPMFPMQPL 167
+P+ Q + +P PPLPP+ P+ PL
Sbjct: 1314 RPLDEQESQFRERDIPSLPPLPPLPPLPPL 1343
>gi|150417989 cyclin K isoform 1 [Homo sapiens]
Length = 580
Score = 53.9 bits (128), Expect = 8e-08
Identities = 47/169 (27%), Positives = 62/169 (36%), Gaps = 29/169 (17%)
Query: 18 PLPPHPGHPGYINFSYEVLTPLKW-----YQSIRPPY----PSYGYEPMGGWLHHQIIPV 68
PLP P P ++ + T + YQS++ PSYG P
Sbjct: 415 PLPHRPPPPPPSSYMTGMSTTSSYMSGEGYQSLQSMMKTEGPSYGALPPA---------- 464
Query: 69 LSQQHPPTHTLQPHHHIPVVPAQQPVIPQQ-----PMMPVPGQHSMTPIQHHQPNLPPPA 123
PP H H P P PV P P +P P P + PN PPP
Sbjct: 465 ---YGPPAHLPYHPHVYPPNPPPPPVPPPPASFPPPAIPPPTPGYPPPPPTYNPNFPPPP 521
Query: 124 QQPYQPQPVQPQPHQPMQPQPPVHPMQPLPP--QPPLPPMFPMQPLPPM 170
+ V P P + P +P +PP QPP+PP P +PP+
Sbjct: 522 PRLPPTHAVPPHPPPGLGLPPASYPPPAVPPGGQPPVPPPIPPPGMPPV 570
Score = 48.1 bits (113), Expect = 4e-06
Identities = 35/111 (31%), Positives = 43/111 (38%), Gaps = 21/111 (18%)
Query: 74 PPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQ 133
PP + P H+P P P P P +P P P P +PPP Y P P
Sbjct: 462 PPAYG--PPAHLPYHPHVYPPNPPPPPVPPP------PASFPPPAIPPPTPG-YPPPPPT 512
Query: 134 PQPHQPMQPQ--PPVHPMQPLPPQ----------PPLPPMFPMQPLPPMLP 172
P+ P P PP H + P PP PP P P+PP +P
Sbjct: 513 YNPNFPPPPPRLPPTHAVPPHPPPGLGLPPASYPPPAVPPGGQPPVPPPIP 563
Score = 43.1 bits (100), Expect = 1e-04
Identities = 48/151 (31%), Positives = 56/151 (37%), Gaps = 48/151 (31%)
Query: 63 HQIIPVLSQ--QHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLP 120
HQI+ + SQ Q P HT H + P+ QP PQ P +Q QP+
Sbjct: 252 HQILDLYSQGKQQMPHHT---PHQLQQPPSLQPT-PQVPQ-----------VQQSQPSQS 296
Query: 121 PPAQQPYQPQPVQP----QP-HQPMQPQP-PVHPMQ-----------------PLPPQ-- 155
QP Q P QP QP QP +P P P P Q P PP+
Sbjct: 297 SEPSQPQQKDPQQPAQQQQPAQQPKKPSPQPSSPRQVKRAVVVSPKEENKAAEPPPPKIP 356
Query: 156 ------PPLPPMFPMQPLPPMLPDLTLEAWP 180
PPLPP P P L EA P
Sbjct: 357 KIETTHPPLPPAHPPPDRKPPLAAALGEAEP 387
Score = 40.0 bits (92), Expect = 0.001
Identities = 34/118 (28%), Positives = 41/118 (34%), Gaps = 15/118 (12%)
Query: 67 PVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQP 126
PV + P P H PV Q P +P +P P P + MT + + Q
Sbjct: 390 PVDATDLPKVQIPPPAHPAPV--HQPPPLPHRPPPPPPSSY-MTGMSTTSSYMSGEGYQS 446
Query: 127 YQPQPVQPQPHQPMQPQ---PPVH---------PMQPLPPQPPLPPMFPMQPLPPMLP 172
Q P P PP H P P PP PP P FP +PP P
Sbjct: 447 LQSMMKTEGPSYGALPPAYGPPAHLPYHPHVYPPNPPPPPVPPPPASFPPPAIPPPTP 504
Score = 37.0 bits (84), Expect = 0.010
Identities = 37/140 (26%), Positives = 48/140 (34%), Gaps = 45/140 (32%)
Query: 66 IPVLSQQHPP--THTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHS--------------- 108
+P + Q P + QP P PAQQ QQP P P S
Sbjct: 285 VPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQPKKPSPQPSSPRQVKRAVVVSPKEE 344
Query: 109 ----------MTPIQHHQPNLPPPAQQPYQPQPV-----QPQPHQPMQ---------PQP 144
+ I+ P LPP P + P+ + +P P+ P P
Sbjct: 345 NKAAEPPPPKIPKIETTHPPLPPAHPPPDRKPPLAAALGEAEPPGPVDATDLPKVQIPPP 404
Query: 145 ----PVHPMQPLPPQPPLPP 160
PVH PLP +PP PP
Sbjct: 405 AHPAPVHQPPPLPHRPPPPP 424
>gi|5174545 myocyte enhancer factor 2D [Homo sapiens]
Length = 521
Score = 52.8 bits (125), Expect = 2e-07
Identities = 36/89 (40%), Positives = 41/89 (46%), Gaps = 9/89 (10%)
Query: 99 PMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQPQP--PVHPMQPLPPQP 156
P PG S+ + Q P QQP QPQP Q QP QP QPQP P P QP Q
Sbjct: 348 PAFSSPGGLSLGNVTAWQQ--PQQPQQPQQPQPPQQQPPQPQQPQPQQPQQPQQPPQQQS 405
Query: 157 PLPP-----MFPMQPLPPMLPDLTLEAWP 180
L P + P PLP + LT+ P
Sbjct: 406 HLVPVSLSNLIPGSPLPHVGAALTVTTHP 434
Score = 42.0 bits (97), Expect = 3e-04
Identities = 32/96 (33%), Positives = 41/96 (42%), Gaps = 6/96 (6%)
Query: 71 QQHPPTHTLQPHHHIPVVPAQ-QPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPY-- 127
QQ QP P P Q QP PQQP P Q + P+ NL P + P+
Sbjct: 368 QQPQQPQQPQPPQQQPPQPQQPQPQQPQQPQQPPQQQSHLVPVS--LSNLIPGSPLPHVG 425
Query: 128 QPQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFP 163
V PH ++ + PV P + P PP P +FP
Sbjct: 426 AALTVTTHPHISIKSE-PVSPSRERSPAPPPPAVFP 460
>gi|162138911 IQ motif and Sec7 domain 2 isoform1 [Homo sapiens]
Length = 1488
Score = 52.8 bits (125), Expect = 2e-07
Identities = 58/189 (30%), Positives = 64/189 (33%), Gaps = 44/189 (23%)
Query: 19 LPPHPGHPGYINFSYEVLTPLKWYQSIRPPYPSYGYEPMGGWLH-HQIIPVLSQQHPPTH 77
LPP P P PL SI PP S P+G H H PV QH +
Sbjct: 1290 LPPPPQQP----------PPLPQLGSIPPPPASA--PPVGPHRHFHAHGPVPGPQH---Y 1334
Query: 78 TL-----------------QPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTP---IQHHQP 117
TL PH P+ P+ P P H P I H P
Sbjct: 1335 TLGRPGRAPRRGAGGHPQFAPHGRHPLHQPTSPLPLYSPAPQHPPAHKQGPKHFIFSHHP 1394
Query: 118 NLPPPAQQPYQPQPVQP-----QPHQPMQPQPPVHPMQPLPPQPPLP---PMFPMQPLPP 169
+ P A P P PH P P P P+ P P PPLP P P PLPP
Sbjct: 1395 QMMPAAGAAGGPGSRPPGGSYSHPHHPQSPLSPHSPIPPHPSYPPLPPPSPHTPHSPLPP 1454
Query: 170 MLPDLTLEA 178
P L A
Sbjct: 1455 TSPHGPLHA 1463
Score = 47.4 bits (111), Expect = 8e-06
Identities = 45/154 (29%), Positives = 54/154 (35%), Gaps = 30/154 (19%)
Query: 47 PPYPSYGYEPMGGWLHHQIIPVL----SQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMP 102
P + +G P LH P+ + QHPP H P H I Q MMP
Sbjct: 1351 PQFAPHGRHP----LHQPTSPLPLYSPAPQHPPAHKQGPKHFIFSHHPQ--------MMP 1398
Query: 103 VPGQHSMTPIQHHQPNLPPPA---QQPYQPQPVQPQPHQPMQPQP---PVHPMQPLPPQP 156
G P PP P+ PQ PH P+ P P P+ P P P
Sbjct: 1399 AAGAAG-------GPGSRPPGGSYSHPHHPQSPL-SPHSPIPPHPSYPPLPPPSPHTPHS 1450
Query: 157 PLPPMFPMQPLPPMLPDLTLEAWPSTDKTKREEV 190
PLPP P PL P T + K K +
Sbjct: 1451 PLPPTSPHGPLHASGPPGTANPPSANPKAKPSRI 1484
Score = 38.1 bits (87), Expect = 0.005
Identities = 28/89 (31%), Positives = 35/89 (39%), Gaps = 9/89 (10%)
Query: 76 THTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQ 135
TH HHH V+P GQ + + P PA PY P P QP
Sbjct: 1238 THHHHHHHHHGHSHGGLGVLPD-------GQSKLQALHAQYCQGPGPAPPPYLP-PQQPS 1289
Query: 136 PHQPMQPQPPVHPMQPLPPQP-PLPPMFP 163
P Q PP+ + +PP P PP+ P
Sbjct: 1290 LPPPPQQPPPLPQLGSIPPPPASAPPVGP 1318
Score = 27.7 bits (60), Expect = 6.3
Identities = 11/25 (44%), Positives = 14/25 (56%)
Query: 134 PQPHQPMQPQPPVHPMQPLPPQPPL 158
P+PHQ M P PP P + Q P+
Sbjct: 1174 PRPHQRMPPPPPPPPPEEYKSQRPV 1198
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 52.4 bits (124), Expect = 2e-07
Identities = 36/113 (31%), Positives = 44/113 (38%), Gaps = 15/113 (13%)
Query: 67 PVLSQQHPPTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQP 126
P+ S P + P V A + P P+ P PG + P PPP P
Sbjct: 650 PITSADCPKPMVVTPG--AAAVAAPSVLAPTLPLPPPPGFPPLPP--------PPPPPPP 699
Query: 127 YQPQPVQPQPHQPMQPQPPVHPM-----QPLPPQPPLPPMFPMQPLPPMLPDL 174
P+ P P P PP HP PLP P +PP + PLPP P L
Sbjct: 700 QPGFPMPPPLPPPPPPPPPAHPAVTVPPPPLPAPPGVPPPPILPPLPPFPPGL 752
Score = 52.0 bits (123), Expect = 3e-07
Identities = 34/91 (37%), Positives = 40/91 (43%), Gaps = 13/91 (14%)
Query: 75 PTHTLQPHHHIPVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQP 134
PT L P P +P P P QP P+P P+ P PPP P P P
Sbjct: 677 PTLPLPPPPGFPPLPPPPPPPPPQPGFPMP-----PPLPPPPP--PPPPAHPAVTVPPPP 729
Query: 135 QPHQPMQPQPPVHPMQPLPPQPPLPP-MFPM 164
P P P PP+ LPP PP PP +FP+
Sbjct: 730 LPAPPGVPPPPI-----LPPLPPFPPGLFPV 755
Score = 43.1 bits (100), Expect = 1e-04
Identities = 33/97 (34%), Positives = 40/97 (41%), Gaps = 19/97 (19%)
Query: 86 PVVPAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLP--PPAQQPYQPQPVQPQPHQPMQPQ 143
P+ A P +PM+ PG ++ P LP PP P P P P P QP P
Sbjct: 650 PITSADCP----KPMVVTPGAAAVAAPSVLAPTLPLPPPPGFPPLPPPPPPPPPQPGFPM 705
Query: 144 PPVHPMQPLPPQPPLPPMFPMQPLPPMLPDLTLEAWP 180
PP P PP PP P PP P +T+ P
Sbjct: 706 PP--------PLPPPPP-----PPPPAHPAVTVPPPP 729
Score = 39.7 bits (91), Expect = 0.002
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 17/99 (17%)
Query: 89 PAQQPVIPQQPMMPVPGQHSMTPIQHHQPNLPPPAQQPYQPQPVQPQ--PHQPMQPQPPV 146
PA P++P + G ++P PPA++ P+ P+ P ++ +P
Sbjct: 1219 PADSREPPEEPGLSQEGAMLLSP--------EPPAKEVEARPPLSPERAPEHDLEVEPEP 1270
Query: 147 HPMQPLPPQPPLPP----MFPMQPLPPMLPDLTLEAWPS 181
M PLP QPPLPP P PP P+ T + PS
Sbjct: 1271 PMMLPLPLQPPLPPPRPPR---PPSPPPEPETTDASHPS 1306
Score = 39.3 bits (90), Expect = 0.002
Identities = 24/83 (28%), Positives = 33/83 (39%), Gaps = 4/83 (4%)
Query: 96 PQQPMMPVPGQHSMTPIQHHQPNLP----PPAQQPYQPQPVQPQPHQPMQPQPPVHPMQP 151
P+ P V + ++P + + +L PP P QP P P P P PP P
Sbjct: 1241 PEPPAKEVEARPPLSPERAPEHDLEVEPEPPMMLPLPLQPPLPPPRPPRPPSPPPEPETT 1300
Query: 152 LPPQPPLPPMFPMQPLPPMLPDL 174
P +PP + PP P L
Sbjct: 1301 DASHPSVPPEPLAEDHPPHTPGL 1323
Score = 37.4 bits (85), Expect = 0.008
Identities = 36/122 (29%), Positives = 45/122 (36%), Gaps = 28/122 (22%)
Query: 86 PVVPAQQPVIPQQPMMPVPGQHSMTP---IQHHQPNLPPPAQQ---------PYQPQ-PV 132
P++PA P PM PG+ +P + P + PPA P QPQ PV
Sbjct: 1459 PLLPAPLASCPP-PMKRKPGRPRRSPPSMLSLDGPLVRPPAGAALGRELLLLPGQPQTPV 1517
Query: 133 QPQPHQPMQ------------PQPPVHPMQPLPPQPPL--PPMFPMQPLPPMLPDLTLEA 178
P H P P PP+ P P PP PP P P + L P +
Sbjct: 1518 FPSTHDPRTVTLDFRNAGIPAPPPPLPPQPPPPPPPPPVEPTKLPFKELDNQWPSEAIPP 1577
Query: 179 WP 180
P
Sbjct: 1578 GP 1579
Score = 32.7 bits (73), Expect = 0.20
Identities = 24/81 (29%), Positives = 32/81 (39%), Gaps = 8/81 (9%)
Query: 96 PQQPMMPVPG-QHSMTPIQHHQPNLPPPAQQPYQPQPVQPQPHQPMQ--PQPPVHPMQPL 152
P P PG + + +P Q + PPP ++P + + P PP PL
Sbjct: 383 PPAQATPAPGFKSAFSPYQTPVAHFPPPPEEPTATAAFGARDSGEFRRAPAPP-----PL 437
Query: 153 PPQPPLPPMFPMQPLPPMLPD 173
PP PL P P P PD
Sbjct: 438 PPAEPLAKEKPGTPPGPPPPD 458
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.140 0.487
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,746,505
Number of Sequences: 37866
Number of extensions: 974642
Number of successful extensions: 29027
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 968
Number of HSP's that attempted gapping in prelim test: 7683
Number of HSP's gapped (non-prelim): 9617
length of query: 191
length of database: 18,247,518
effective HSP length: 96
effective length of query: 95
effective length of database: 14,612,382
effective search space: 1388176290
effective search space used: 1388176290
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.