SFPQ 31045

Name: SFPQ	Sequence: fasta or formatted (707aa)		NCBI GI: 4826998
Description: splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)		Referenced in: Capping and Splicing
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.7 40 3 C cysteine 0.3 2 1 D aspartate 3.1 22 2 E glutamate 8.2 58 3 F phenylalanine 3.0 21 1 G glycine 15.1 107 6 H histidine 2.5 18 2 I isoleucine 1.7 12 1 K lysine 4.7 33 2 L leucine 4.5 32 2 M methionine 4.0 28 2 N asparagine 2.0 14 1 P proline 16.3 115 5 Q glutamine 6.9 49 5 R arginine 8.5 60 4 S serine 5.2 37 3 T threonine 3.3 23 3 V valine 3.0 21 2 W tryptophan 0.1 1 1 Y tyrosine 2.0 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 splicing factor proline/glutamine rich (polypyrimidin... PSPC1 0.346 paraspeckle protein 1 NONO 0.332 non-POU domain containing, octamer-binding isoform ... NONO 0.332 non-POU domain containing, octamer-binding isoform ... NONO 0.332 non-POU domain containing, octamer-binding isoform 1... NONO 0.284 non-POU domain containing, octamer-binding isoform ... PRB1 0.077 proline-rich protein BstNI subfamily 1 isoform 1 pre... PRB2 0.077 proline-rich protein BstNI subfamily 2 PRB3 0.072 proline-rich protein BstNI subfamily 3 precursor [H... FMN2 0.066 formin 2 WIPF1 0.062 WAS/WASL interacting protein family, member 1 [Homo... WIPF1 0.062 WAS/WASL interacting protein family, member 1 NACA 0.058 nascent polypeptide-associated complex alpha subuni... CPSF6 0.058 cleavage and polyadenylation specific factor 6, 68 ... SYN1 0.058 synapsin I isoform Ia SYN1 0.058 synapsin I isoform Ib DIAPH1 0.057 diaphanous 1 isoform 2 DIAPH1 0.057 diaphanous 1 isoform 1 SF1 0.057 splicing factor 1 isoform 1 SFRS15 0.056 splicing factor, arginine/serine-rich 15 isoform 3 ... CCNK 0.054 cyclin K isoform 1 SF1 0.054 splicing factor 1 isoform 2 PRB4 0.054 proline-rich protein BstNI subfamily 4 precursor [Ho... SF3A2 0.054 splicing factor 3a, subunit 2 SFRS15 0.054 splicing factor, arginine/serine-rich 15 isoform 2 ... SFRS15 0.054 splicing factor, arginine/serine-rich 15 isoform 1 [... WIPF2 0.053 WIRE protein COL17A1 0.051 alpha 1 type XVII collagen PCLO 0.051 piccolo isoform 2 PCLO 0.051 piccolo isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.