RERE 964

Name: RERE	Sequence: fasta or formatted (1012aa)		NCBI GI: 112382226
Description: atrophin-1 like protein isoform b		Referenced in: Histones, Related Proteins, and Modifying Enzymes
Other entries for this name: alt prot [1566aa] atrophin-1 like protein isoform a alt prot [1566aa] atrophin-1 like protein isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.3 94 3 C cysteine 0.4 4 1 D aspartate 3.3 33 2 E glutamate 6.5 66 2 F phenylalanine 1.6 16 1 G glycine 5.6 57 2 H histidine 5.6 57 3 I isoleucine 2.1 21 1 K lysine 3.8 38 2 L leucine 7.7 78 2 M methionine 2.2 22 1 N asparagine 2.1 21 1 P proline 18.6 188 5 Q glutamine 6.5 66 3 R arginine 5.9 60 2 S serine 10.4 105 3 T threonine 4.9 50 2 V valine 2.1 21 2 W tryptophan 0.1 1 1 Y tyrosine 1.4 14 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 atrophin-1 like protein isoform b RERE 1.000 atrophin-1 like protein isoform a RERE 1.000 atrophin-1 like protein isoform a ATN1 0.328 atrophin-1 ATN1 0.328 atrophin-1 FLJ22184 0.062 PREDICTED: hypothetical protein FLJ22184 BRD4 0.059 bromodomain-containing protein 4 isoform long NACA 0.059 nascent polypeptide-associated complex alpha subuni... FLJ22184 0.054 PREDICTED: hypothetical protein FLJ22184 RAPH1 0.053 Ras association and pleckstrin homology domains 1 is... PRG4 0.053 proteoglycan 4 isoform B PRG4 0.053 proteoglycan 4 isoform A FMN2 0.051 formin 2 FLJ22184 0.051 PREDICTED: hypothetical protein LOC80164 PRG4 0.050 proteoglycan 4 isoform D PRG4 0.050 proteoglycan 4 isoform C PRB2 0.048 proline-rich protein BstNI subfamily 2 MLL2 0.047 myeloid/lymphoid or mixed-lineage leukemia 2 SF1 0.043 splicing factor 1 isoform 1 MUC2 0.043 mucin 2 precursor PRB1 0.042 proline-rich protein BstNI subfamily 1 isoform 1 pre... WIPF1 0.041 WAS/WASL interacting protein family, member 1 [Homo... WIPF1 0.041 WAS/WASL interacting protein family, member 1 CCNK 0.041 cyclin K isoform 1 GLTSCR1 0.041 glioma tumor suppressor candidate region gene 1 [Ho... KIAA1522 0.040 hypothetical protein LOC57648 SF1 0.039 splicing factor 1 isoform 2 WNK2 0.038 WNK lysine deficient protein kinase 2 AUTS2 0.038 autism susceptibility candidate 2 isoform 2 RBM33 0.038 RNA binding motif protein 33 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.