Guide to the Human Genome
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Name: FAM102A Sequence: fasta or formatted (242aa) NCBI GI: 42558264
Description:

early estrogen-induced gene 1 protein isoform b

Referenced in:

Additional Signal Responses

Other entries for this name:
alt prot [384aa] early estrogen-induced gene 1 protein isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.3          8           1
 C cysteine            0.8          2           1
 D aspartate           5.8         14           2
 E glutamate           6.2         15           2
 F phenylalanine       2.5          6           1
 G glycine             8.3         20           3
 H histidine           3.3          8           1
 I isoleucine          3.7          9           1
 K lysine              3.7          9           2
 L leucine             7.0         17           2
 M methionine          0.8          2           1
 N asparagine          2.5          6           1
 P proline             8.3         20           2
 Q glutamine           3.3          8           2
 R arginine            7.0         17           2
 S serine             19.8         48           3
 T threonine           7.4         18           1
 V valine              4.5         11           2
 W tryptophan          0.4          1           1
 Y tyrosine            1.2          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   early estrogen-induced gene 1 protein isoform b [Hom... 
FAM102A               1.000   early estrogen-induced gene 1 protein isoform a [Hom...
FAM102B               0.327   hypothetical protein LOC284611 
SRRM2                 0.052   splicing coactivator subunit SRm300 
MUC12                 0.041   PREDICTED: mucin 12 
MUC12                 0.039   PREDICTED: mucin 12 
MUC12                 0.037   PREDICTED: mucin 12 
MUC12                 0.037   PREDICTED: mucin 12, cell surface associated 
DSPP                  0.035   dentin sialophosphoprotein preproprotein 
ABI1                  0.033   abl-interactor 1 isoform c 
UBAP2                 0.031   ubiquitin associated protein 2 
LOC643446             0.031   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.031   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.031   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.031   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.031   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.031   PREDICTED: similar to ribonucleic acid binding prote...
RNPS1                 0.031   RNA-binding protein S1, serine-rich domain 
RNPS1                 0.031   RNA-binding protein S1, serine-rich domain 
MUC21                 0.028   mucin 21 
MED1                  0.026   mediator complex subunit 1 
MLLT3                 0.026   myeloid/lymphoid or mixed-lineage leukemia (trithor...
CIZ1                  0.026   CDKN1A interacting zinc finger protein 1 isoform 1 ...
CIZ1                  0.026   CDKN1A interacting zinc finger protein 1 isoform 2 ...
CIZ1                  0.026   CDKN1A interacting zinc finger protein 1 isoform 1 [...
ZC3H18                0.026   zinc finger CCCH-type containing 18 
APC                   0.024   adenomatous polyposis coli 
APC                   0.024   adenomatous polyposis coli 
APC                   0.024   adenomatous polyposis coli 
TNRC18                0.024   trinucleotide repeat containing 18 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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