SRRM2 2176

Name: SRRM2	Sequence: fasta or formatted (2752aa)		NCBI GI: 118572613
Description: splicing coactivator subunit SRm300		Referenced in: Protein Composition and Structure Capping and Splicing
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.6 183 5 C cysteine 0.5 13 1 D aspartate 2.3 64 1 E glutamate 4.7 128 3 F phenylalanine 0.7 19 1 G glycine 5.0 137 2 H histidine 1.5 40 1 I isoleucine 1.0 27 2 K lysine 4.7 130 7 L leucine 4.5 123 2 M methionine 1.2 33 2 N asparagine 1.5 40 2 P proline 12.2 337 3 Q glutamine 3.5 96 2 R arginine 17.0 468 4 S serine 23.3 642 42 T threonine 6.2 172 3 V valine 2.9 80 2 W tryptophan 0.2 5 1 Y tyrosine 0.5 15 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 splicing coactivator subunit SRm300 FLJ37078 0.043 hypothetical protein LOC222183 MUC12 0.038 PREDICTED: mucin 12 MUC17 0.037 mucin 17 LOC100170229 0.036 hypothetical protein LOC100170229 SRRM1 0.035 serine/arginine repetitive matrix 1 FLG 0.031 filaggrin TRIOBP 0.028 TRIO and F-actin binding protein isoform 6 NACA 0.027 nascent polypeptide-associated complex alpha subuni... KIAA1853 0.026 KIAA1853 protein SON 0.025 SON DNA-binding protein isoform F SON 0.025 SON DNA-binding protein isoform B SFRS4 0.023 splicing factor, arginine/serine-rich 4 ZC3H13 0.023 zinc finger CCCH-type containing 13 DPCR1 0.023 diffuse panbronchiolitis critical region 1 protein ... PRPF4B 0.023 serine/threonine-protein kinase PRP4K FLJ22184 0.022 PREDICTED: hypothetical protein FLJ22184 MUC4 0.022 mucin 4 isoform a PPIG 0.021 peptidylprolyl isomerase G TCOF1 0.020 Treacher Collins-Franceschetti syndrome 1 isoform e... MUC12 0.019 PREDICTED: mucin 12, cell surface associated SCAF1 0.019 SR-related CTD-associated factor 1 TCOF1 0.019 Treacher Collins-Franceschetti syndrome 1 isoform a ... MUC12 0.019 PREDICTED: mucin 12 LOC100294236 0.018 PREDICTED: similar to diffuse panbronchiolitis crit... NKTR 0.018 natural killer-tumor recognition sequence TCOF1 0.018 Treacher Collins-Franceschetti syndrome 1 isoform d... TNRC18 0.018 trinucleotide repeat containing 18 MDC1 0.018 mediator of DNA-damage checkpoint 1 C2orf16 0.018 hypothetical protein LOC84226 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.