TNRC18 9367

Name: TNRC18	Sequence: fasta or formatted (2968aa)		NCBI GI: 169658378
Description: trinucleotide repeat containing 18		Referenced in: Protein Composition and Structure
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.6 345 4 C cysteine 1.0 29 1 D aspartate 4.3 129 3 E glutamate 8.0 237 4 F phenylalanine 2.1 61 1 G glycine 9.1 269 3 H histidine 2.1 62 3 I isoleucine 1.3 39 2 K lysine 6.4 190 4 L leucine 9.1 269 3 M methionine 1.4 41 1 N asparagine 1.1 32 2 P proline 11.4 339 4 Q glutamine 3.7 111 3 R arginine 6.9 206 3 S serine 11.1 328 58 T threonine 3.5 103 2 V valine 3.8 114 3 W tryptophan 0.6 19 1 Y tyrosine 1.5 45 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 trinucleotide repeat containing 18 BAHCC1 0.095 BAH domain and coiled-coil containing 1 SRRM2 0.016 splicing coactivator subunit SRm300 DSPP 0.014 dentin sialophosphoprotein preproprotein SETD1A 0.012 SET domain containing 1A TCOF1 0.011 Treacher Collins-Franceschetti syndrome 1 isoform a ... TCOF1 0.011 Treacher Collins-Franceschetti syndrome 1 isoform e... MLLT3 0.010 myeloid/lymphoid or mixed-lineage leukemia (trithor... CHD9 0.010 chromodomain helicase DNA binding protein 9 MLLT1 0.010 myeloid/lymphoid or mixed-lineage leukemia (trithora... ACIN1 0.010 apoptotic chromatin condensation inducer 1 NOLC1 0.010 nucleolar and coiled-body phosphoprotein 1 MUC21 0.010 mucin 21 TCOF1 0.010 Treacher Collins-Franceschetti syndrome 1 isoform b ... TCOF1 0.010 Treacher Collins-Franceschetti syndrome 1 isoform f... TCOF1 0.010 Treacher Collins-Franceschetti syndrome 1 isoform d... ZCCHC10 0.009 zinc finger, CCHC domain containing 10 LOC100131251 0.009 PREDICTED: hypothetical protein LOC100131251 0.009 PREDICTED: hypothetical protein PNN 0.009 pinin, desmosome associated protein MLL2 0.009 myeloid/lymphoid or mixed-lineage leukemia 2 NACA 0.009 nascent polypeptide-associated complex alpha subuni... PPRC1 0.009 peroxisome proliferator-activated receptor gamma, co... PRG4 0.009 proteoglycan 4 isoform D PRG4 0.009 proteoglycan 4 isoform C PRG4 0.009 proteoglycan 4 isoform B PRG4 0.009 proteoglycan 4 isoform A BAT2 0.009 HLA-B associated transcript-2 ZC3H18 0.009 zinc finger CCCH-type containing 18 LOC729815 0.009 PREDICTED: hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.