Guide to the Human Genome
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Name: SAMD14 Sequence: fasta or formatted (445aa) NCBI GI: 28557802
Description:

sterile alpha motif domain containing 14

Referenced in:

Serine / Threonine Protein Phosphatases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         39           4
 C cysteine            1.3          6           1
 D aspartate           5.8         26           2
 E glutamate           6.5         29           1
 F phenylalanine       2.5         11           1
 G glycine             7.6         34           2
 H histidine           3.1         14           2
 I isoleucine          0.7          3           1
 K lysine              6.1         27           2
 L leucine             9.7         43           2
 M methionine          0.9          4           1
 N asparagine          1.1          5           1
 P proline             9.0         40           3
 Q glutamine           4.3         19           2
 R arginine            8.3         37           3
 S serine             16.0         71           3
 T threonine           3.6         16           2
 V valine              2.7         12           1
 W tryptophan          1.1          5           1
 Y tyrosine            0.9          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sterile alpha motif domain containing 14 
PPP1R9A               0.125   protein phosphatase 1, regulatory (inhibitor) subuni...
SHANK2                0.030   SH3 and multiple ankyrin repeat domains 2 isoform 1...
DGKD                  0.024   diacylglycerol kinase, delta 130kDa isoform 1 
DGKD                  0.024   diacylglycerol kinase, delta 130kDa isoform 2 
SARM1                 0.023   sterile alpha and TIR motif containing 1 
DGKH                  0.021   diacylglycerol kinase, eta isoform 2 
SRRM2                 0.021   splicing coactivator subunit SRm300 
CNKSR2                0.019   connector enhancer of kinase suppressor of Ras 2 [Ho...
CNKSR3                0.019   CNKSR family member 3 
C14orf174             0.019   hypothetical protein LOC161394 
C19orf57              0.019   hypothetical protein LOC79173 
FLJ22184              0.018   PREDICTED: hypothetical protein LOC80164 
MAP7D1                0.018   MAP7 domain containing 1 
LOC643446             0.018   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.018   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.018   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.018   PREDICTED: similar to ribonucleic acid binding prote...
TENC1                 0.017   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.017   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.017   tensin like C1 domain containing phosphatase isoform...
UBE2Z                 0.017   ubiquitin-conjugating enzyme E2Z 
SHANK1                0.017   SH3 and multiple ankyrin repeat domains 1 
SHANK3                0.016   SH3 and multiple ankyrin repeat domains 3 
PPRC1                 0.016   peroxisome proliferator-activated receptor gamma, co...
ANKRD11               0.016   ankyrin repeat domain 11 
RP1L1                 0.016   retinitis pigmentosa 1-like 1 
MUC17                 0.016   mucin 17 
AFF4                  0.016   ALL1 fused gene from 5q31 
NOLC1                 0.016   nucleolar and coiled-body phosphoprotein 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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