Guide to the Human Genome
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Name: ANKRD11 Sequence: fasta or formatted (2663aa) NCBI GI: 56676397
Description:

ankyrin repeat domain 11

Referenced in:

Ankyrin Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9        211           3
 C cysteine            1.2         33           2
 D aspartate           8.1        215           3
 E glutamate          10.7        284           3
 F phenylalanine       2.5         66           2
 G glycine             5.0        134           2
 H histidine           2.3         60           2
 I isoleucine          2.1         56           2
 K lysine             12.1        323           3
 L leucine             7.0        186           3
 M methionine          1.2         31           2
 N asparagine          2.3         60           2
 P proline             8.0        213           3
 Q glutamine           3.4         90           3
 R arginine            6.2        165           3
 S serine              9.7        259           5
 T threonine           3.8        101           2
 V valine              4.1        110           2
 W tryptophan          0.6         16           1
 Y tyrosine            1.9         50           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat domain 11 
ANKRD12               0.096   ankyrin repeat domain 12 isoform 2 
ANKRD12               0.093   ankyrin repeat domain 12 isoform 1 
TCHH                  0.024   trichohyalin 
ANKRD31               0.020   PREDICTED: ankyrin repeat domain 31 
ANKRD31               0.020   PREDICTED: ankyrin repeat domain 31 
ANKRD31               0.020   PREDICTED: ankyrin repeat domain 31 
BARD1                 0.019   BRCA1 associated RING domain 1 
BOD1L                 0.019   biorientation of chromosomes in cell division 1-like...
ZC3H13                0.018   zinc finger CCCH-type containing 13 
LOC283685             0.017   PREDICTED: golgi autoantigen, golgin subfamily a-li...
ATRX                  0.017   transcriptional regulator ATRX isoform 2 
ATRX                  0.017   transcriptional regulator ATRX isoform 1 
LOC100286959          0.016   PREDICTED: hypothetical protein XP_002343921 
NFKBIL2               0.016   NF-kappa-B inhibitor-like protein 2 
FLJ22184              0.016   PREDICTED: hypothetical protein FLJ22184 
LOC283685             0.015   PREDICTED: golgi autoantigen, golgin subfamily a-li...
EIF5B                 0.014   eukaryotic translation initiation factor 5B 
NEFH                  0.014   neurofilament, heavy polypeptide 200kDa 
ANKRD32               0.014   ankyrin repeat domain 32 
CALD1                 0.014   caldesmon 1 isoform 1 
RBBP6                 0.014   retinoblastoma-binding protein 6 isoform 2 
RBBP6                 0.014   retinoblastoma-binding protein 6 isoform 1 
EIF3A                 0.013   eukaryotic translation initiation factor 3, subunit 1...
CYLC1                 0.013   cylicin, basic protein of sperm head cytoskeleton 1...
BCOR                  0.013   BCL-6 interacting corepressor isoform a 
BCOR                  0.013   BCL-6 interacting corepressor isoform c 
BCOR                  0.013   BCL-6 interacting corepressor isoform b 
BCOR                  0.013   BCL-6 interacting corepressor isoform a 
NACA                  0.013   nascent polypeptide-associated complex alpha subuni...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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