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Search of human proteins with 239750954
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239750954 PREDICTED: hypothetical protein XP_002347616 [Homo
sapiens]
(194 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239750954 PREDICTED: hypothetical protein XP_002347616 [Homo ... 419 e-118
gi|239745360 PREDICTED: hypothetical protein XP_002343446 [Homo ... 419 e-118
gi|169206171 PREDICTED: hypothetical protein [Homo sapiens] 42 3e-04
gi|169206489 PREDICTED: hypothetical protein [Homo sapiens] 42 3e-04
gi|169205942 PREDICTED: hypothetical protein [Homo sapiens] 42 3e-04
gi|169168451 PREDICTED: hypothetical protein [Homo sapiens] 40 0.001
gi|169168160 PREDICTED: hypothetical protein [Homo sapiens] 40 0.001
gi|169167373 PREDICTED: hypothetical protein [Homo sapiens] 40 0.001
gi|16950645 neurotrophic factor artemin isoform 2 [Homo sapiens] 37 0.008
gi|209954781 neurotrophic factor artemin isoform 1 precursor [Ho... 37 0.008
gi|209954778 neurotrophic factor artemin isoform 3 precursor [Ho... 37 0.008
gi|209954776 neurotrophic factor artemin isoform 1 precursor [Ho... 37 0.008
gi|209977029 neurotrophic factor artemin isoform 3 precursor [Ho... 37 0.008
gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo ... 37 0.011
gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo ... 37 0.011
gi|46195763 metastasis suppressor 1-like [Homo sapiens] 37 0.011
gi|147902746 MEX3A protein [Homo sapiens] 37 0.011
gi|169173182 PREDICTED: hypothetical protein [Homo sapiens] 36 0.018
gi|188536004 zinc finger protein 469 [Homo sapiens] 36 0.018
gi|83921602 solute carrier family 38, member 10 isoform a [Homo ... 36 0.018
gi|18466802 Ras and Rab interactor 2 [Homo sapiens] 36 0.018
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 36 0.023
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 36 0.023
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 36 0.023
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 36 0.023
gi|122937247 unc-13 homolog A [Homo sapiens] 36 0.023
gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens] 36 0.023
gi|239753160 PREDICTED: hypothetical protein XP_002345578 [Homo ... 35 0.031
gi|239747730 PREDICTED: hypothetical protein XP_002348256 [Homo ... 35 0.031
gi|239741596 PREDICTED: hypothetical protein XP_002342245 [Homo ... 35 0.031
>gi|239750954 PREDICTED: hypothetical protein XP_002347616 [Homo
sapiens]
Length = 194
Score = 419 bits (1078), Expect = e-118
Identities = 194/194 (100%), Positives = 194/194 (100%)
Query: 1 MKASISGAPAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTR 60
MKASISGAPAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTR
Sbjct: 1 MKASISGAPAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTR 60
Query: 61 TPMYPSRAHPTHPRLWWAHTAEGTQLGDCSPHIWQEAEGGGRTVHNQLRGIGGHQLLQTW 120
TPMYPSRAHPTHPRLWWAHTAEGTQLGDCSPHIWQEAEGGGRTVHNQLRGIGGHQLLQTW
Sbjct: 61 TPMYPSRAHPTHPRLWWAHTAEGTQLGDCSPHIWQEAEGGGRTVHNQLRGIGGHQLLQTW 120
Query: 121 PEAPLCGRPGQGAWGAGPTREAPPPLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQAS 180
PEAPLCGRPGQGAWGAGPTREAPPPLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQAS
Sbjct: 121 PEAPLCGRPGQGAWGAGPTREAPPPLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQAS 180
Query: 181 SRSSSLSHASLLCP 194
SRSSSLSHASLLCP
Sbjct: 181 SRSSSLSHASLLCP 194
>gi|239745360 PREDICTED: hypothetical protein XP_002343446 [Homo
sapiens]
Length = 194
Score = 419 bits (1078), Expect = e-118
Identities = 194/194 (100%), Positives = 194/194 (100%)
Query: 1 MKASISGAPAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTR 60
MKASISGAPAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTR
Sbjct: 1 MKASISGAPAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTR 60
Query: 61 TPMYPSRAHPTHPRLWWAHTAEGTQLGDCSPHIWQEAEGGGRTVHNQLRGIGGHQLLQTW 120
TPMYPSRAHPTHPRLWWAHTAEGTQLGDCSPHIWQEAEGGGRTVHNQLRGIGGHQLLQTW
Sbjct: 61 TPMYPSRAHPTHPRLWWAHTAEGTQLGDCSPHIWQEAEGGGRTVHNQLRGIGGHQLLQTW 120
Query: 121 PEAPLCGRPGQGAWGAGPTREAPPPLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQAS 180
PEAPLCGRPGQGAWGAGPTREAPPPLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQAS
Sbjct: 121 PEAPLCGRPGQGAWGAGPTREAPPPLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQAS 180
Query: 181 SRSSSLSHASLLCP 194
SRSSSLSHASLLCP
Sbjct: 181 SRSSSLSHASLLCP 194
>gi|169206171 PREDICTED: hypothetical protein [Homo sapiens]
Length = 466
Score = 42.0 bits (97), Expect = 3e-04
Identities = 58/197 (29%), Positives = 74/197 (37%), Gaps = 25/197 (12%)
Query: 7 GAPAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQT-----RT 61
GA AR V EK+ P ++L G Q R A + RT
Sbjct: 224 GAAGARAQVRGSEKRA-CPGSTLPPSSVLAGCVGTRARGHGGVQRQRFSAPSSHSTGART 282
Query: 62 PMYPSRAHPTHPRLWWAHTAEGTQLGDCSPHIWQEAEGGGRTVHNQLRGIG-GHQLLQTW 120
PSRA P P G P + GGG + QL G G G + +
Sbjct: 283 LPTPSRARPGKP----------APRGSAPPA--RLRGGGGGSGLTQLVGSGRGSGVTHSV 330
Query: 121 PEAPLCGRPGQGA-WGAGPTREAPP--PLETPAPPMPRPNEDPRYGGPALGAGRPSQSSC 177
L R G A G R P PL +PAP P + R GP LGAGR SC
Sbjct: 331 GTHALATRRGSRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSVRAFGPRLGAGR---LSC 387
Query: 178 QASSRSSSLSHASLLCP 194
+ R+++L ++L P
Sbjct: 388 PQAPRAAALPGIAVLAP 404
>gi|169206489 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 42.0 bits (97), Expect = 3e-04
Identities = 57/189 (30%), Positives = 78/189 (41%), Gaps = 28/189 (14%)
Query: 10 AARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTPMYPSRAH 69
A RT +++ E++ D L AQG + A ++ G +S RT PSRA
Sbjct: 338 AVRTDLSTAEEE------DPRSGRALEPAQGSELWARAERHGG---SSGARTLPTPSRAR 388
Query: 70 PTHPRLWWAHTAEGTQLGDCSPHIWQEAEGGGRTVHNQLRGIG-GHQLLQTWPEAPLCGR 128
P P G P + GGG + QL G G G + + L R
Sbjct: 389 PGKP----------APRGSAPPA--RLRGGGGGSGLTQLVGSGRGSGVTHSVGTHALATR 436
Query: 129 PGQGA-WGAGPTREAPP--PLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQASSRSSS 185
G A G R P PL +PAP P + R GP LGAGR SC + R+++
Sbjct: 437 RGSRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSVRAFGPRLGAGR---LSCPQAPRAAA 493
Query: 186 LSHASLLCP 194
L ++L P
Sbjct: 494 LPGIAVLAP 502
>gi|169205942 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 42.0 bits (97), Expect = 3e-04
Identities = 57/189 (30%), Positives = 78/189 (41%), Gaps = 28/189 (14%)
Query: 10 AARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTPMYPSRAH 69
A RT +++ E++ D L AQG + A ++ G +S RT PSRA
Sbjct: 338 AVRTDLSTAEEE------DPRSGRALEPAQGSELWARAERHGG---SSGARTLPTPSRAR 388
Query: 70 PTHPRLWWAHTAEGTQLGDCSPHIWQEAEGGGRTVHNQLRGIG-GHQLLQTWPEAPLCGR 128
P P G P + GGG + QL G G G + + L R
Sbjct: 389 PGKP----------APRGSAPPA--RLRGGGGGSGLTQLVGSGRGSGVTHSVGTHALATR 436
Query: 129 PGQGA-WGAGPTREAPP--PLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQASSRSSS 185
G A G R P PL +PAP P + R GP LGAGR SC + R+++
Sbjct: 437 RGSRAPRPVGVLRGVPHFRPLSSPAPQSPPRSPSVRAFGPRLGAGR---LSCPQAPRAAA 493
Query: 186 LSHASLLCP 194
L ++L P
Sbjct: 494 LPGIAVLAP 502
>gi|169168451 PREDICTED: hypothetical protein [Homo sapiens]
Length = 148
Score = 40.0 bits (92), Expect = 0.001
Identities = 31/86 (36%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Query: 110 GIGGHQLLQTWPEAPLCGRPGQGAWGAGPTREAPPPLETPAPPMPRPNEDPRYGGPALGA 169
G GG L+ + + GRP G G G T + PP L+ P P P+ PR PA A
Sbjct: 42 GGGGSPFLRNQVKQAVAGRPLGGGRGQGCTAQVPPLLQRPRPSQAPPS-TPRANPPATHA 100
Query: 170 -GRPSQSSCQASSRSSSLSHASLLCP 194
P S+C+A ASL CP
Sbjct: 101 CFFPRGSTCRALPLL-----ASLFCP 121
>gi|169168160 PREDICTED: hypothetical protein [Homo sapiens]
Length = 148
Score = 40.0 bits (92), Expect = 0.001
Identities = 31/86 (36%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Query: 110 GIGGHQLLQTWPEAPLCGRPGQGAWGAGPTREAPPPLETPAPPMPRPNEDPRYGGPALGA 169
G GG L+ + + GRP G G G T + PP L+ P P P+ PR PA A
Sbjct: 42 GGGGSPFLRNQVKQAVAGRPLGGGRGQGCTAQVPPLLQRPRPSQAPPS-TPRANPPATHA 100
Query: 170 -GRPSQSSCQASSRSSSLSHASLLCP 194
P S+C+A ASL CP
Sbjct: 101 CFFPRGSTCRALPLL-----ASLFCP 121
>gi|169167373 PREDICTED: hypothetical protein [Homo sapiens]
Length = 148
Score = 40.0 bits (92), Expect = 0.001
Identities = 31/86 (36%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Query: 110 GIGGHQLLQTWPEAPLCGRPGQGAWGAGPTREAPPPLETPAPPMPRPNEDPRYGGPALGA 169
G GG L+ + + GRP G G G T + PP L+ P P P+ PR PA A
Sbjct: 42 GGGGSPFLRNQVKQAVAGRPLGGGRGQGCTAQVPPLLQRPRPSQAPPS-TPRANPPATHA 100
Query: 170 -GRPSQSSCQASSRSSSLSHASLLCP 194
P S+C+A ASL CP
Sbjct: 101 CFFPRGSTCRALPLL-----ASLFCP 121
>gi|16950645 neurotrophic factor artemin isoform 2 [Homo sapiens]
Length = 237
Score = 37.4 bits (85), Expect = 0.008
Identities = 20/53 (37%), Positives = 23/53 (43%)
Query: 134 WGAGPTREAPPPLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQASSRSSSL 186
W +G R PP PAPP P P GG A AG P + A +R L
Sbjct: 90 WCSGRARRPPPQPSRPAPPPPAPPSALPRGGRAARAGGPGSRARAAGARGCRL 142
Score = 30.8 bits (68), Expect = 0.76
Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 138 PTREAPPPLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQASS-----RSSSLSHAS 190
P+R APPP P +PR R GGP A C+ S R+ L H S
Sbjct: 102 PSRPAPPP-PAPPSALPRGGRAARAGGPGSRARAAGARGCRLRSQLVPVRALGLGHRS 158
>gi|209954781 neurotrophic factor artemin isoform 1 precursor [Homo
sapiens]
Length = 220
Score = 37.4 bits (85), Expect = 0.008
Identities = 20/53 (37%), Positives = 23/53 (43%)
Query: 134 WGAGPTREAPPPLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQASSRSSSL 186
W +G R PP PAPP P P GG A AG P + A +R L
Sbjct: 73 WCSGRARRPPPQPSRPAPPPPAPPSALPRGGRAARAGGPGSRARAAGARGCRL 125
Score = 30.8 bits (68), Expect = 0.76
Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 138 PTREAPPPLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQASS-----RSSSLSHAS 190
P+R APPP P +PR R GGP A C+ S R+ L H S
Sbjct: 85 PSRPAPPP-PAPPSALPRGGRAARAGGPGSRARAAGARGCRLRSQLVPVRALGLGHRS 141
>gi|209954778 neurotrophic factor artemin isoform 3 precursor [Homo
sapiens]
Length = 228
Score = 37.4 bits (85), Expect = 0.008
Identities = 20/53 (37%), Positives = 23/53 (43%)
Query: 134 WGAGPTREAPPPLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQASSRSSSL 186
W +G R PP PAPP P P GG A AG P + A +R L
Sbjct: 81 WCSGRARRPPPQPSRPAPPPPAPPSALPRGGRAARAGGPGSRARAAGARGCRL 133
Score = 30.8 bits (68), Expect = 0.76
Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 138 PTREAPPPLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQASS-----RSSSLSHAS 190
P+R APPP P +PR R GGP A C+ S R+ L H S
Sbjct: 93 PSRPAPPP-PAPPSALPRGGRAARAGGPGSRARAAGARGCRLRSQLVPVRALGLGHRS 149
>gi|209954776 neurotrophic factor artemin isoform 1 precursor [Homo
sapiens]
Length = 220
Score = 37.4 bits (85), Expect = 0.008
Identities = 20/53 (37%), Positives = 23/53 (43%)
Query: 134 WGAGPTREAPPPLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQASSRSSSL 186
W +G R PP PAPP P P GG A AG P + A +R L
Sbjct: 73 WCSGRARRPPPQPSRPAPPPPAPPSALPRGGRAARAGGPGSRARAAGARGCRL 125
Score = 30.8 bits (68), Expect = 0.76
Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 138 PTREAPPPLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQASS-----RSSSLSHAS 190
P+R APPP P +PR R GGP A C+ S R+ L H S
Sbjct: 85 PSRPAPPP-PAPPSALPRGGRAARAGGPGSRARAAGARGCRLRSQLVPVRALGLGHRS 141
>gi|209977029 neurotrophic factor artemin isoform 3 precursor [Homo
sapiens]
Length = 228
Score = 37.4 bits (85), Expect = 0.008
Identities = 20/53 (37%), Positives = 23/53 (43%)
Query: 134 WGAGPTREAPPPLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQASSRSSSL 186
W +G R PP PAPP P P GG A AG P + A +R L
Sbjct: 81 WCSGRARRPPPQPSRPAPPPPAPPSALPRGGRAARAGGPGSRARAAGARGCRL 133
Score = 30.8 bits (68), Expect = 0.76
Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 138 PTREAPPPLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQASS-----RSSSLSHAS 190
P+R APPP P +PR R GGP A C+ S R+ L H S
Sbjct: 93 PSRPAPPP-PAPPSALPRGGRAARAGGPGSRARAAGARGCRLRSQLVPVRALGLGHRS 149
>gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo
sapiens]
Length = 647
Score = 37.0 bits (84), Expect = 0.011
Identities = 26/63 (41%), Positives = 28/63 (44%), Gaps = 10/63 (15%)
Query: 124 PLCGRPGQGAWGAGPTREAPP--PLETPAPPMPRP---NEDPRYGGPALGAGRPSQSSCQ 178
P C RP GAGP RE P P P PP RP +DP GP G P+ S
Sbjct: 401 PPCARPS----GAGPAREGPAAWPGGAPTPPHARPTGRRQDPE-PGPRAPRGGPASSGWH 455
Query: 179 ASS 181
A S
Sbjct: 456 AGS 458
>gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo
sapiens]
Length = 647
Score = 37.0 bits (84), Expect = 0.011
Identities = 26/63 (41%), Positives = 28/63 (44%), Gaps = 10/63 (15%)
Query: 124 PLCGRPGQGAWGAGPTREAPP--PLETPAPPMPRP---NEDPRYGGPALGAGRPSQSSCQ 178
P C RP GAGP RE P P P PP RP +DP GP G P+ S
Sbjct: 401 PPCARPS----GAGPAREGPAAWPGGAPTPPHARPTGRRQDPE-PGPRAPRGGPASSGWH 455
Query: 179 ASS 181
A S
Sbjct: 456 AGS 458
>gi|46195763 metastasis suppressor 1-like [Homo sapiens]
Length = 747
Score = 37.0 bits (84), Expect = 0.011
Identities = 38/156 (24%), Positives = 59/156 (37%), Gaps = 7/156 (4%)
Query: 6 SGAPAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTPMYP 65
S P R A++S P P + +P + G M P + ++ +T +P+ P
Sbjct: 569 STKPTVRRALSSAGPIPIRPPIVPVKTPTVPDSPGYMGPTRAGSEECVFYTDETASPLAP 628
Query: 66 SRAHPTHPRLWWAHTAEGTQLGDCSPHIWQEAEGGGRTVHNQLRGIGGHQLLQTWPEAPL 125
A + RL +TA G+ + + + G G Q H L++ E
Sbjct: 629 DLAKASPKRLSLPNTAWGSPSPEAAGY-----PGAGAEDEQQQLAANRHSLVEKLGELVA 683
Query: 126 CGRP-GQGAWGAGPTREAPPPLETPAPPMPRPNEDP 160
G+G + A P ETP PP P DP
Sbjct: 684 GAHALGEGQFPFPTALSATPTEETPTPP-PAATSDP 718
>gi|147902746 MEX3A protein [Homo sapiens]
Length = 520
Score = 37.0 bits (84), Expect = 0.011
Identities = 22/71 (30%), Positives = 26/71 (36%), Gaps = 8/71 (11%)
Query: 121 PEAPLCGRPGQGAWGAGPTREAPPPLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQAS 180
P AP G G G G P + A PP P PP P PA P+ + Q
Sbjct: 53 PPAPTAGEDGGGGGGGAPAQPAAPPQPAPPPPPAAP--------PAAPTAAPAAQTPQPP 104
Query: 181 SRSSSLSHASL 191
+ S A L
Sbjct: 105 TAPKGASDAKL 115
>gi|169173182 PREDICTED: hypothetical protein [Homo sapiens]
Length = 255
Score = 36.2 bits (82), Expect = 0.018
Identities = 40/145 (27%), Positives = 49/145 (33%), Gaps = 32/145 (22%)
Query: 41 PMVPAPSDTQGPRLPASQTRT------------PMYPSRAHPTHPRLWWAHTAEGTQLGD 88
P P PS + P P R P RA P R W +A
Sbjct: 40 PTAPGPSPRRAPEPPLLTLRPRPGTLRAPGNAESPAPRRARPDLGRPWATRSA------- 92
Query: 89 CSPH--IWQEAE-GGGRTVHNQLRGIGGHQLLQTWPEAPLCGRPGQGAWGAGPTREAPPP 145
SPH +W + GG + + H T PE L A P + P P
Sbjct: 93 ASPHSKMWLGSHLRGGEMSGDPHTDLPAHPAQTTNPELEL---------PADPAQPDPAP 143
Query: 146 LETPAPPMPRPNEDPRYGGPALGAG 170
L PAPP P ++ P GP AG
Sbjct: 144 LSRPAPPRP-AHQSPAEEGPRGAAG 167
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 36.2 bits (82), Expect = 0.018
Identities = 24/58 (41%), Positives = 27/58 (46%), Gaps = 7/58 (12%)
Query: 121 PEAPLCGRPGQGAWGAGPTREAPPPL--ETPAPPMPRPNEDPRYGGPALGAGRPSQSS 176
P P G P + G P +APPPL TP P PRP + G PA GRP S
Sbjct: 876 PRGPSSGHPLKSKAGVTPESKAPPPLPAATPDPQTPRPGD---RGCPA--RGRPKTRS 928
Score = 27.3 bits (59), Expect = 8.4
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 148 TPAPPM--PRPNEDPRYGGPALGAGRPSQSSCQASSR 182
+P PP P P+ DP GG L P +C+ SR
Sbjct: 3273 SPGPPRTTPSPSPDPWAGGEPLLQATPVHEACKDPSR 3309
>gi|83921602 solute carrier family 38, member 10 isoform a [Homo
sapiens]
Length = 1119
Score = 36.2 bits (82), Expect = 0.018
Identities = 45/194 (23%), Positives = 64/194 (32%), Gaps = 28/194 (14%)
Query: 18 EEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTPMYPSRAHPTHPRLWW 77
EE +P + H P QG M P D++ + Q P +A
Sbjct: 518 EENKPPSRHAGGK----APGVQGQMAPPLPDSEREKQEPEQGEVGKRPGQAQALEEAGDL 573
Query: 78 AHTAEGTQLGDCSPHIWQEAEG---GGRTVHNQLRGI-----------GGHQLLQTWPEA 123
+ D P + E G R +H + + + GG + P
Sbjct: 574 PEDPQKVPEADGQPAVQPAKEDLGPGDRGLHPRPQAVLSEQQNGLAVGGGEKAKGGPPPG 633
Query: 124 PLCGRPGQGAWGAGPTREAPPPLETPA-----PPMPRPNEDPRYGGPALGAGRPSQSSCQ 178
G GQ A + + P P E PA PP PR D G G + S +
Sbjct: 634 NAAGDTGQPAEDSDHGGKPPLPAEKPAPGPGLPPEPREQRDVERAG-----GNQAASQLE 688
Query: 179 ASSRSSSLSHASLL 192
+ R+ L HA LL
Sbjct: 689 EAGRAEMLDHAVLL 702
>gi|18466802 Ras and Rab interactor 2 [Homo sapiens]
Length = 895
Score = 36.2 bits (82), Expect = 0.018
Identities = 49/167 (29%), Positives = 63/167 (37%), Gaps = 26/167 (15%)
Query: 24 TPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTPMYPSRAHPTHPRLWWAHTAEG 83
TP+ + T P + P S PRL ++T+T M + H H + G
Sbjct: 295 TPNANGTERTRSPPPRPPPPAINSLHTSPRLARTETQTSMPETVNHNKHGNV----ALPG 350
Query: 84 TQLGDCSP------HIWQEAEGGGRTVHNQLRGIGGHQLLQTWPEAPLCGRPGQGAWGAG 137
T+ P + EAEGG +T+ G G L T G PG GA
Sbjct: 351 TKPTPIPPPRLKKQASFLEAEGGAKTLSGGRPGAGPELELGT------AGSPG----GAP 400
Query: 138 PTREAPPPLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQASSRSS 184
P EA P T APP + P +G G R S S SS S
Sbjct: 401 P--EAAPGDCTRAPPPSSESRPPCHG----GRQRLSDMSISTSSSDS 441
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 35.8 bits (81), Expect = 0.023
Identities = 39/158 (24%), Positives = 55/158 (34%), Gaps = 16/158 (10%)
Query: 9 PAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTPMYPSRA 68
P + ++E P TP + PA P PAP+ + P ++ P P
Sbjct: 415 PKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEP 474
Query: 69 HPTHPRLWWAHTAEGT--QLGDCSPHIWQEAEGGGRTVHNQLRGIGGHQLLQTWPEAPLC 126
PT P+ TA T +L +P E T + +L T PE P
Sbjct: 475 APTTPK----ETAPTTPKKLTPTTP------EKLAPTTPEKPAPTTPEELAPTTPEEPTP 524
Query: 127 GRPGQGA----WGAGPTREAPPPLETPAPPMPRPNEDP 160
P + A A P P TP P P ++P
Sbjct: 525 TTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEP 562
Score = 33.1 bits (74), Expect = 0.15
Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Query: 4 SISGAPAA--RTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRT 61
+I AP A + + P TP + T PA P PAP+ T+ P P +
Sbjct: 236 TIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEP-APTTTKSA 294
Query: 62 PMYPSRAHPTHPR 74
P P PT P+
Sbjct: 295 PTTPKEPAPTTPK 307
Score = 30.4 bits (67), Expect = 0.99
Identities = 21/78 (26%), Positives = 26/78 (33%), Gaps = 5/78 (6%)
Query: 2 KASISGAPAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSD-----TQGPRLPA 56
K + P +E P TP PA P PAP + T+GP
Sbjct: 621 KGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTT 680
Query: 57 SQTRTPMYPSRAHPTHPR 74
S P P PT P+
Sbjct: 681 SDKPAPTTPKETAPTTPK 698
Score = 29.6 bits (65), Expect = 1.7
Identities = 33/147 (22%), Positives = 51/147 (34%), Gaps = 14/147 (9%)
Query: 14 AVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTPMYPSRAHPTHP 73
A ++E P TP + PA P PAP+ + P ++ +P P PT
Sbjct: 334 APTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTT 393
Query: 74 RLWWAHTAEGTQLGDCSPHIWQEAEGGGRTVHNQLRGIGGHQLLQTWPEAPLCGRPGQGA 133
+ + T + +P + A T + + T P+ P P + A
Sbjct: 394 K------SAPTTTKEPAPTTTKSAP----TTPKEPSPTTTKEPAPTTPKEPAPTTPKKPA 443
Query: 134 WGAGPTREAPPPLETPAPPMPRPNEDP 160
PT P TP P P + P
Sbjct: 444 ----PTTPKEPAPTTPKEPAPTTTKKP 466
Score = 29.6 bits (65), Expect = 1.7
Identities = 20/76 (26%), Positives = 26/76 (34%)
Query: 9 PAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTPMYPSRA 68
P EE P TP + PA P AP+ + P + P P
Sbjct: 503 PEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEP 562
Query: 69 HPTHPRLWWAHTAEGT 84
PT P+ T +GT
Sbjct: 563 APTTPKETAPTTPKGT 578
Score = 28.5 bits (62), Expect = 3.7
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 13 TAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTP 62
T+ S++ P TP + PA P PAP+ + P S+ TP
Sbjct: 677 TSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTP 726
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 35.8 bits (81), Expect = 0.023
Identities = 39/158 (24%), Positives = 55/158 (34%), Gaps = 16/158 (10%)
Query: 9 PAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTPMYPSRA 68
P + ++E P TP + PA P PAP+ + P ++ P P
Sbjct: 456 PKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEP 515
Query: 69 HPTHPRLWWAHTAEGT--QLGDCSPHIWQEAEGGGRTVHNQLRGIGGHQLLQTWPEAPLC 126
PT P+ TA T +L +P E T + +L T PE P
Sbjct: 516 APTTPK----ETAPTTPKKLTPTTP------EKLAPTTPEKPAPTTPEELAPTTPEEPTP 565
Query: 127 GRPGQGA----WGAGPTREAPPPLETPAPPMPRPNEDP 160
P + A A P P TP P P ++P
Sbjct: 566 TTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEP 603
Score = 33.1 bits (74), Expect = 0.15
Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Query: 4 SISGAPAA--RTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRT 61
+I AP A + + P TP + T PA P PAP+ T+ P P +
Sbjct: 277 TIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEP-APTTTKSA 335
Query: 62 PMYPSRAHPTHPR 74
P P PT P+
Sbjct: 336 PTTPKEPAPTTPK 348
Score = 30.4 bits (67), Expect = 0.99
Identities = 21/78 (26%), Positives = 26/78 (33%), Gaps = 5/78 (6%)
Query: 2 KASISGAPAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSD-----TQGPRLPA 56
K + P +E P TP PA P PAP + T+GP
Sbjct: 662 KGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTT 721
Query: 57 SQTRTPMYPSRAHPTHPR 74
S P P PT P+
Sbjct: 722 SDKPAPTTPKETAPTTPK 739
Score = 29.6 bits (65), Expect = 1.7
Identities = 33/147 (22%), Positives = 51/147 (34%), Gaps = 14/147 (9%)
Query: 14 AVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTPMYPSRAHPTHP 73
A ++E P TP + PA P PAP+ + P ++ +P P PT
Sbjct: 375 APTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTT 434
Query: 74 RLWWAHTAEGTQLGDCSPHIWQEAEGGGRTVHNQLRGIGGHQLLQTWPEAPLCGRPGQGA 133
+ + T + +P + A T + + T P+ P P + A
Sbjct: 435 K------SAPTTTKEPAPTTTKSAP----TTPKEPSPTTTKEPAPTTPKEPAPTTPKKPA 484
Query: 134 WGAGPTREAPPPLETPAPPMPRPNEDP 160
PT P TP P P + P
Sbjct: 485 ----PTTPKEPAPTTPKEPAPTTTKKP 507
Score = 29.6 bits (65), Expect = 1.7
Identities = 20/76 (26%), Positives = 26/76 (34%)
Query: 9 PAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTPMYPSRA 68
P EE P TP + PA P AP+ + P + P P
Sbjct: 544 PEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEP 603
Query: 69 HPTHPRLWWAHTAEGT 84
PT P+ T +GT
Sbjct: 604 APTTPKETAPTTPKGT 619
Score = 28.5 bits (62), Expect = 3.7
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 13 TAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTP 62
T+ S++ P TP + PA P PAP+ + P S+ TP
Sbjct: 718 TSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTP 767
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 35.8 bits (81), Expect = 0.023
Identities = 39/158 (24%), Positives = 55/158 (34%), Gaps = 16/158 (10%)
Query: 9 PAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTPMYPSRA 68
P + ++E P TP + PA P PAP+ + P ++ P P
Sbjct: 508 PKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEP 567
Query: 69 HPTHPRLWWAHTAEGT--QLGDCSPHIWQEAEGGGRTVHNQLRGIGGHQLLQTWPEAPLC 126
PT P+ TA T +L +P E T + +L T PE P
Sbjct: 568 APTTPK----ETAPTTPKKLTPTTP------EKLAPTTPEKPAPTTPEELAPTTPEEPTP 617
Query: 127 GRPGQGA----WGAGPTREAPPPLETPAPPMPRPNEDP 160
P + A A P P TP P P ++P
Sbjct: 618 TTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEP 655
Score = 33.1 bits (74), Expect = 0.15
Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Query: 4 SISGAPAA--RTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRT 61
+I AP A + + P TP + T PA P PAP+ T+ P P +
Sbjct: 329 TIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEP-APTTTKSA 387
Query: 62 PMYPSRAHPTHPR 74
P P PT P+
Sbjct: 388 PTTPKEPAPTTPK 400
Score = 30.4 bits (67), Expect = 0.99
Identities = 21/78 (26%), Positives = 26/78 (33%), Gaps = 5/78 (6%)
Query: 2 KASISGAPAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSD-----TQGPRLPA 56
K + P +E P TP PA P PAP + T+GP
Sbjct: 714 KGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTT 773
Query: 57 SQTRTPMYPSRAHPTHPR 74
S P P PT P+
Sbjct: 774 SDKPAPTTPKETAPTTPK 791
Score = 29.6 bits (65), Expect = 1.7
Identities = 33/147 (22%), Positives = 51/147 (34%), Gaps = 14/147 (9%)
Query: 14 AVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTPMYPSRAHPTHP 73
A ++E P TP + PA P PAP+ + P ++ +P P PT
Sbjct: 427 APTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTT 486
Query: 74 RLWWAHTAEGTQLGDCSPHIWQEAEGGGRTVHNQLRGIGGHQLLQTWPEAPLCGRPGQGA 133
+ + T + +P + A T + + T P+ P P + A
Sbjct: 487 K------SAPTTTKEPAPTTTKSAP----TTPKEPSPTTTKEPAPTTPKEPAPTTPKKPA 536
Query: 134 WGAGPTREAPPPLETPAPPMPRPNEDP 160
PT P TP P P + P
Sbjct: 537 ----PTTPKEPAPTTPKEPAPTTTKKP 559
Score = 29.6 bits (65), Expect = 1.7
Identities = 20/76 (26%), Positives = 26/76 (34%)
Query: 9 PAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTPMYPSRA 68
P EE P TP + PA P AP+ + P + P P
Sbjct: 596 PEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEP 655
Query: 69 HPTHPRLWWAHTAEGT 84
PT P+ T +GT
Sbjct: 656 APTTPKETAPTTPKGT 671
Score = 28.5 bits (62), Expect = 3.7
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 13 TAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTP 62
T+ S++ P TP + PA P PAP+ + P S+ TP
Sbjct: 770 TSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTP 819
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 35.8 bits (81), Expect = 0.023
Identities = 39/158 (24%), Positives = 55/158 (34%), Gaps = 16/158 (10%)
Query: 9 PAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTPMYPSRA 68
P + ++E P TP + PA P PAP+ + P ++ P P
Sbjct: 549 PKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEP 608
Query: 69 HPTHPRLWWAHTAEGT--QLGDCSPHIWQEAEGGGRTVHNQLRGIGGHQLLQTWPEAPLC 126
PT P+ TA T +L +P E T + +L T PE P
Sbjct: 609 APTTPK----ETAPTTPKKLTPTTP------EKLAPTTPEKPAPTTPEELAPTTPEEPTP 658
Query: 127 GRPGQGA----WGAGPTREAPPPLETPAPPMPRPNEDP 160
P + A A P P TP P P ++P
Sbjct: 659 TTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEP 696
Score = 33.1 bits (74), Expect = 0.15
Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Query: 4 SISGAPAA--RTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRT 61
+I AP A + + P TP + T PA P PAP+ T+ P P +
Sbjct: 370 TIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEP-APTTTKSA 428
Query: 62 PMYPSRAHPTHPR 74
P P PT P+
Sbjct: 429 PTTPKEPAPTTPK 441
Score = 30.4 bits (67), Expect = 0.99
Identities = 21/78 (26%), Positives = 26/78 (33%), Gaps = 5/78 (6%)
Query: 2 KASISGAPAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSD-----TQGPRLPA 56
K + P +E P TP PA P PAP + T+GP
Sbjct: 755 KGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTT 814
Query: 57 SQTRTPMYPSRAHPTHPR 74
S P P PT P+
Sbjct: 815 SDKPAPTTPKETAPTTPK 832
Score = 29.6 bits (65), Expect = 1.7
Identities = 33/147 (22%), Positives = 51/147 (34%), Gaps = 14/147 (9%)
Query: 14 AVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTPMYPSRAHPTHP 73
A ++E P TP + PA P PAP+ + P ++ +P P PT
Sbjct: 468 APTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTT 527
Query: 74 RLWWAHTAEGTQLGDCSPHIWQEAEGGGRTVHNQLRGIGGHQLLQTWPEAPLCGRPGQGA 133
+ + T + +P + A T + + T P+ P P + A
Sbjct: 528 K------SAPTTTKEPAPTTTKSAP----TTPKEPSPTTTKEPAPTTPKEPAPTTPKKPA 577
Query: 134 WGAGPTREAPPPLETPAPPMPRPNEDP 160
PT P TP P P + P
Sbjct: 578 ----PTTPKEPAPTTPKEPAPTTTKKP 600
Score = 29.6 bits (65), Expect = 1.7
Identities = 20/76 (26%), Positives = 26/76 (34%)
Query: 9 PAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTPMYPSRA 68
P EE P TP + PA P AP+ + P + P P
Sbjct: 637 PEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEP 696
Query: 69 HPTHPRLWWAHTAEGT 84
PT P+ T +GT
Sbjct: 697 APTTPKETAPTTPKGT 712
Score = 28.5 bits (62), Expect = 3.7
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 13 TAVNSEEKQPDTPHQDKLWETLLPAAQGPMVPAPSDTQGPRLPASQTRTP 62
T+ S++ P TP + PA P PAP+ + P S+ TP
Sbjct: 811 TSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTP 860
>gi|122937247 unc-13 homolog A [Homo sapiens]
Length = 1791
Score = 35.8 bits (81), Expect = 0.023
Identities = 35/107 (32%), Positives = 45/107 (42%), Gaps = 29/107 (27%)
Query: 99 GGGRTVHNQLRGIGGHQLL------------QTWPEAPLCGRPGQGAWGAGPTREAPPPL 146
GG T+ Q+R G LL + W EAPL PG + A P R AP P
Sbjct: 4 GGTCTISVQVRVCTGGNLLGGRRRPLSPCNEEVWGEAPL---PGARPFNAPPARSAPAPS 60
Query: 147 ETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQASSRSSSLSHASLLC 193
P +P P++ R+ P G RP +C+ L SLLC
Sbjct: 61 GVPGLRLPAPHQ--RHSRP--GRLRP---TCE-------LGDMSLLC 93
Score = 29.6 bits (65), Expect = 1.7
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 8/59 (13%)
Query: 20 KQPDTPHQDKLW-ETLLPAAQ------GPMVPAPSDTQGPRLPASQTRTPMYPSRAHPT 71
++P +P +++W E LP A+ PAPS G RLPA R P R PT
Sbjct: 26 RRPLSPCNEEVWGEAPLPGARPFNAPPARSAPAPSGVPGLRLPAPHQRHSR-PGRLRPT 83
>gi|7657387 CCR4-NOT transcription complex, subunit 3 [Homo sapiens]
Length = 753
Score = 35.8 bits (81), Expect = 0.023
Identities = 49/187 (26%), Positives = 67/187 (35%), Gaps = 20/187 (10%)
Query: 6 SGAPAARTAVNSEEKQPDTPHQDKLWETLLPAAQGPMV-PAPSDTQGPRLPASQTRTPMY 64
SG P A +A+++ P P+A GP PAPS G P +Q P
Sbjct: 325 SGPPPAASALSTTPGNNGVPAP-----AAPPSALGPKASPAPSHNSGTPAPYAQAVAPPA 379
Query: 65 PSRAHPTHPRLWWAHTAEGTQLGDCSPHIWQEAEGGGRTVHNQLRGIG-GHQLLQTWPEA 123
PS T PR + G G GG + N G G G Q T +
Sbjct: 380 PSGPSTTQPRPPSVQPSGGGGGG--------SGGGGSSSSSNSSAGGGAGKQNGATSYSS 431
Query: 124 PLCGRPGQ----GAWGAGPTREAPPPLETPAPPMPRPNEDPRYGGPALGAGRPSQSSCQA 179
+ P + + G + +A P P P P +++P P GAG + S
Sbjct: 432 VVADSPAEVALSSSGGNNASSQALGPPSGPHNPPPSTSKEPSAAAPT-GAGGVAPGSGNN 490
Query: 180 SSRSSSL 186
S S L
Sbjct: 491 SGGPSLL 497
>gi|239753160 PREDICTED: hypothetical protein XP_002345578 [Homo
sapiens]
Length = 130
Score = 35.4 bits (80), Expect = 0.031
Identities = 31/96 (32%), Positives = 35/96 (36%), Gaps = 12/96 (12%)
Query: 92 HIWQEAEGGGRTVHNQLRGIGGHQLLQTWPEA---PLCGRPGQGAWGAGPTREAPPPLET 148
H+ A GR G+ LL P P CG PG A A PL T
Sbjct: 37 HLISAASPDGRAAQPTPLGLSRRSLLGASPRGAPRPQCGWPGHRA-------AARAPLPT 89
Query: 149 PAPPMPRPNEDPRYGGPALG--AGRPSQSSCQASSR 182
P PP R D R G A A R + +C SR
Sbjct: 90 PRPPCSRYRGDGRKNGTASRGCADRSLRRNCPEGSR 125
>gi|239747730 PREDICTED: hypothetical protein XP_002348256 [Homo
sapiens]
Length = 130
Score = 35.4 bits (80), Expect = 0.031
Identities = 31/96 (32%), Positives = 35/96 (36%), Gaps = 12/96 (12%)
Query: 92 HIWQEAEGGGRTVHNQLRGIGGHQLLQTWPEA---PLCGRPGQGAWGAGPTREAPPPLET 148
H+ A GR G+ LL P P CG PG A A PL T
Sbjct: 37 HLISAASPDGRAAQPTPLGLSRRSLLGASPRGAPRPQCGWPGHRA-------AARAPLPT 89
Query: 149 PAPPMPRPNEDPRYGGPALG--AGRPSQSSCQASSR 182
P PP R D R G A A R + +C SR
Sbjct: 90 PRPPCSRYRGDGRKNGTASRGCADRSLRRNCPEGSR 125
>gi|239741596 PREDICTED: hypothetical protein XP_002342245 [Homo
sapiens]
Length = 130
Score = 35.4 bits (80), Expect = 0.031
Identities = 31/96 (32%), Positives = 35/96 (36%), Gaps = 12/96 (12%)
Query: 92 HIWQEAEGGGRTVHNQLRGIGGHQLLQTWPEA---PLCGRPGQGAWGAGPTREAPPPLET 148
H+ A GR G+ LL P P CG PG A A PL T
Sbjct: 37 HLISAASPDGRAAQPTPLGLSRRSLLGASPRGAPRPQCGWPGHRA-------AARAPLPT 89
Query: 149 PAPPMPRPNEDPRYGGPALG--AGRPSQSSCQASSR 182
P PP R D R G A A R + +C SR
Sbjct: 90 PRPPWSRYRGDGRKNGTASRGCADRSLRRNCPEGSR 125
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.130 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,058,993
Number of Sequences: 37866
Number of extensions: 749215
Number of successful extensions: 6929
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 486
Number of HSP's that attempted gapping in prelim test: 5296
Number of HSP's gapped (non-prelim): 1925
length of query: 194
length of database: 18,247,518
effective HSP length: 97
effective length of query: 97
effective length of database: 14,574,516
effective search space: 1413728052
effective search space used: 1413728052
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.