Guide to the Human Genome
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Name: AUTS2 Sequence: fasta or formatted (266aa) NCBI GI: 187829485
Description:

autism susceptibility candidate 2 isoform 3

Referenced in:

Fibroblast Growth Factors

Other entries for this name:
alt prot [1259aa] autism susceptibility candidate 2 isoform 1
alt prot [1235aa] autism susceptibility candidate 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         17           2
 C cysteine            1.5          4           1
 D aspartate           5.3         14           1
 E glutamate           6.4         17           2
 F phenylalanine       3.4          9           2
 G glycine             9.8         26           4
 H histidine           2.6          7           2
 I isoleucine          0.8          2           2
 K lysine              9.0         24           3
 L leucine             7.9         21           2
 M methionine          1.9          5           1
 N asparagine          3.0          8           1
 P proline             4.9         13           2
 Q glutamine           2.3          6           1
 R arginine           12.4         33           2
 S serine             15.8         42           3
 T threonine           3.8         10           1
 V valine              1.9          5           1
 W tryptophan          0.4          1           1
 Y tyrosine            0.8          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   autism susceptibility candidate 2 isoform 3 
AUTS2                 0.819   autism susceptibility candidate 2 isoform 2 
AUTS2                 0.819   autism susceptibility candidate 2 isoform 1 
FBRSL1                0.181   fibrosin-like 1 
GPATCH8               0.053   G patch domain containing 8 
CDC2L5                0.037   cell division cycle 2-like 5 isoform 1 
CDC2L5                0.037   cell division cycle 2-like 5 isoform 2 
CADPS                 0.033   Ca2+-dependent secretion activator isoform 2 
CADPS                 0.033   Ca2+-dependent secretion activator isoform 1 
CADPS                 0.033   Ca2+-dependent secretion activator isoform 3 
SCAF1                 0.031   SR-related CTD-associated factor 1 
ZC3H18                0.030   zinc finger CCCH-type containing 18 
SFRS18                0.030   splicing factor, arginine/serine-rich 130 
SFRS18                0.030   splicing factor, arginine/serine-rich 130 
U2AF1                 0.030   U2 small nuclear RNA auxillary factor 1 isoform c [H...
U2AF1                 0.030   U2 small nuclear RNA auxillary factor 1 isoform b [H...
U2AF1                 0.030   U2 small nuclear RNA auxillary factor 1 isoform a [Ho...
CHD1                  0.030   chromodomain helicase DNA binding protein 1 
SFRS4                 0.028   splicing factor, arginine/serine-rich 4 
KDM1                  0.028   amine oxidase (flavin containing) domain 2 isoform a...
LOC100292370          0.028   PREDICTED: hypothetical protein 
KDM1                  0.024   amine oxidase (flavin containing) domain 2 isoform b...
SFRS6                 0.024   arginine/serine-rich splicing factor 6 
NOM1                  0.024   nucleolar protein with MIF4G domain 1 
SRRM2                 0.024   splicing coactivator subunit SRm300 
LOC643446             0.024   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.024   PREDICTED: similar to ribonucleic acid binding prot...
SFRS12                0.024   splicing factor, arginine/serine-rich 12 isoform a ...
SFRS12                0.024   splicing factor, arginine/serine-rich 12 isoform b [...
RNPS1                 0.024   RNA-binding protein S1, serine-rich domain 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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