Guide to the Human Genome
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Name: AUTS2 Sequence: fasta or formatted (1259aa) NCBI GI: 17864090
Description:

autism susceptibility candidate 2 isoform 1

Referenced in:

Fibroblast Growth Factors
Gene Structure

Other entries for this name:
alt prot [1235aa] autism susceptibility candidate 2 isoform 2
alt prot [266aa] autism susceptibility candidate 2 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         86           3
 C cysteine            0.6          7           2
 D aspartate           5.1         64           2
 E glutamate           5.8         73           2
 F phenylalanine       3.0         38           1
 G glycine             6.0         75           4
 H histidine           6.6         83           8
 I isoleucine          2.2         28           2
 K lysine              4.8         60           3
 L leucine             7.8         98           2
 M methionine          1.5         19           2
 N asparagine          2.6         33           1
 P proline            14.2        179           5
 Q glutamine           4.4         55           2
 R arginine            7.9         99           2
 S serine             10.8        136           4
 T threonine           5.1         64           2
 V valine              3.2         40           2
 W tryptophan          0.4          5           1
 Y tyrosine            1.4         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   autism susceptibility candidate 2 isoform 1 
AUTS2                 0.976   autism susceptibility candidate 2 isoform 2 
FBRSL1                0.228   fibrosin-like 1 
AUTS2                 0.160   autism susceptibility candidate 2 isoform 3 
FBRS                  0.091   fibrosin 
RERE                  0.023   atrophin-1 like protein isoform b 
RERE                  0.023   atrophin-1 like protein isoform a 
RERE                  0.023   atrophin-1 like protein isoform a 
ATN1                  0.023   atrophin-1 
ATN1                  0.023   atrophin-1 
FLJ22184              0.021   PREDICTED: hypothetical protein FLJ22184 
BRD4                  0.020   bromodomain-containing protein 4 isoform long 
FLJ22184              0.020   PREDICTED: hypothetical protein LOC80164 
CCNK                  0.018   cyclin K isoform 1 
WNK2                  0.018   WNK lysine deficient protein kinase 2 
FLJ22184              0.016   PREDICTED: hypothetical protein FLJ22184 
MED15                 0.015   mediator complex subunit 15 isoform b 
SRRM1                 0.015   serine/arginine repetitive matrix 1 
RAPH1                 0.015   Ras association and pleckstrin homology domains 1 is...
SRRM2                 0.015   splicing coactivator subunit SRm300 
MLL2                  0.015   myeloid/lymphoid or mixed-lineage leukemia 2 
SFPQ                  0.015   splicing factor proline/glutamine rich (polypyrimidin...
MICALL1               0.015   molecule interacting with Rab13 
ARHGAP17              0.015   nadrin isoform 1 
PRR12                 0.015   proline rich 12 
MLL5                  0.015   myeloid/lymphoid or mixed-lineage leukemia 5 
MLL5                  0.015   myeloid/lymphoid or mixed-lineage leukemia 5 
RBM33                 0.015   RNA binding motif protein 33 
GLTSCR1               0.014   glioma tumor suppressor candidate region gene 1 [Ho...
PCLO                  0.014   piccolo isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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