Search of human proteins with 18644728

Search of human proteins with 18644728

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|18644728 nucleolar protein family 6 alpha isoform [Homo
sapiens]
         (1146 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|18644728 nucleolar protein family 6 alpha isoform [Homo sapiens]  2295   0.0  
gi|22212931 nucleolar protein family 6 gamma isoform [Homo sapiens]  1314   0.0  
gi|31543140 Usher syndrome 1C binding protein 1 [Homo sapiens]         43   0.002
gi|24307933 transcription factor EB [Homo sapiens]                     35   0.53 
gi|91208415 mesenchyme homeobox 1 isoform 3 [Homo sapiens]             35   0.53 
gi|4758710 mesenchyme homeobox 1 isoform 1 [Homo sapiens]              35   0.53 
gi|115392150 hypothetical protein LOC644815 [Homo sapiens]             33   1.2  
gi|4506967 v-ski sarcoma viral oncogene homolog [Homo sapiens]         33   1.6  
gi|57165355 latrophilin 1 isoform 1 precursor [Homo sapiens]           33   1.6  
gi|41281557 latrophilin 1 isoform 2 precursor [Homo sapiens]           33   1.6  
gi|157168355 CD22 molecule [Homo sapiens]                              33   2.0  
gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo sap...    32   3.5  
gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo sap...    32   3.5  
gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo sap...    32   3.5  
gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo sapi...    32   3.5  
gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]          32   4.5  
gi|31317301 nitric oxide synthase 1 (neuronal) adaptor protein i...    32   4.5  
gi|205277334 nitric oxide synthase 1 (neuronal) adaptor protein ...    32   4.5  
gi|17402909 tripartite motif protein TRIM29 [Homo sapiens]             31   5.9  
gi|24429572 TBP-associated factor RNA polymerase 1-like [Homo sa...    31   5.9  
gi|239756270 PREDICTED: StAR-related lipid transfer (START) doma...    31   7.7  
gi|239750815 PREDICTED: StAR-related lipid transfer (START) doma...    31   7.7  
gi|239745175 PREDICTED: StAR-related lipid transfer (START) doma...    31   7.7  
gi|156104874 envoplakin [Homo sapiens]                                 31   7.7  

>gi|18644728 nucleolar protein family 6 alpha isoform [Homo sapiens]
          Length = 1146

 Score = 2295 bits (5947), Expect = 0.0
 Identities = 1146/1146 (100%), Positives = 1146/1146 (100%)

Query: 1    MGPAPAGEQLRGATGEPEVMEPALEGTGKEGKKASSRKRTLAEPPAKGLLQPVKLSRAEL 60
            MGPAPAGEQLRGATGEPEVMEPALEGTGKEGKKASSRKRTLAEPPAKGLLQPVKLSRAEL
Sbjct: 1    MGPAPAGEQLRGATGEPEVMEPALEGTGKEGKKASSRKRTLAEPPAKGLLQPVKLSRAEL 60

Query: 61   YKEPTNEELNRLRETEILFHSSLLRLQVEELLKEVRLSEKKKDRIDAFLREVNQRVVRVP 120
            YKEPTNEELNRLRETEILFHSSLLRLQVEELLKEVRLSEKKKDRIDAFLREVNQRVVRVP
Sbjct: 61   YKEPTNEELNRLRETEILFHSSLLRLQVEELLKEVRLSEKKKDRIDAFLREVNQRVVRVP 120

Query: 121  SVPETELTDQAWLPAGVRVPLHQVPYAVKGCFRFLPPAQVTVVGSYLLGTCIRPDINVDV 180
            SVPETELTDQAWLPAGVRVPLHQVPYAVKGCFRFLPPAQVTVVGSYLLGTCIRPDINVDV
Sbjct: 121  SVPETELTDQAWLPAGVRVPLHQVPYAVKGCFRFLPPAQVTVVGSYLLGTCIRPDINVDV 180

Query: 181  ALTMPREILQDKDGLNQRYFRKRALYLAHLAHHLAQDPLFGSVCFSYTNGCHLKPSLLLR 240
            ALTMPREILQDKDGLNQRYFRKRALYLAHLAHHLAQDPLFGSVCFSYTNGCHLKPSLLLR
Sbjct: 181  ALTMPREILQDKDGLNQRYFRKRALYLAHLAHHLAQDPLFGSVCFSYTNGCHLKPSLLLR 240

Query: 241  PRGKDERLVTVRLHPCPPPDFFRPCRLLPTKNNVRSAWYRGQSPAGDGSPEPPTPRYNTW 300
            PRGKDERLVTVRLHPCPPPDFFRPCRLLPTKNNVRSAWYRGQSPAGDGSPEPPTPRYNTW
Sbjct: 241  PRGKDERLVTVRLHPCPPPDFFRPCRLLPTKNNVRSAWYRGQSPAGDGSPEPPTPRYNTW 300

Query: 301  VLQDTVLESHLQLLSTILSSAQGLKDGVALLKVWLRQRELDKGQGGFTGFLVSMLVVFLV 360
            VLQDTVLESHLQLLSTILSSAQGLKDGVALLKVWLRQRELDKGQGGFTGFLVSMLVVFLV
Sbjct: 301  VLQDTVLESHLQLLSTILSSAQGLKDGVALLKVWLRQRELDKGQGGFTGFLVSMLVVFLV 360

Query: 361  STRKIHTTMSGYQVLRSVLQFLATTDLTVNGISLCLSSDPSLPALADFHQAFSVVFLDSS 420
            STRKIHTTMSGYQVLRSVLQFLATTDLTVNGISLCLSSDPSLPALADFHQAFSVVFLDSS
Sbjct: 361  STRKIHTTMSGYQVLRSVLQFLATTDLTVNGISLCLSSDPSLPALADFHQAFSVVFLDSS 420

Query: 421  GHLNLCADVTASTYHQVQHEARLSMMLLDSRADDGFHLLLMTPKPMIRAFDHVLHLRPLS 480
            GHLNLCADVTASTYHQVQHEARLSMMLLDSRADDGFHLLLMTPKPMIRAFDHVLHLRPLS
Sbjct: 421  GHLNLCADVTASTYHQVQHEARLSMMLLDSRADDGFHLLLMTPKPMIRAFDHVLHLRPLS 480

Query: 481  RLQAACHRLKLWPELQDNGGDYVSAALGPLTTLLEQGLGARLNLLAHSRPPVPEWDISQD 540
            RLQAACHRLKLWPELQDNGGDYVSAALGPLTTLLEQGLGARLNLLAHSRPPVPEWDISQD
Sbjct: 481  RLQAACHRLKLWPELQDNGGDYVSAALGPLTTLLEQGLGARLNLLAHSRPPVPEWDISQD 540

Query: 541  PPKHKDSGTLTLGLLLRPEGLTSVLELGPEADQPEAAKFRQFWGSRSELRRFQDGAIREA 600
            PPKHKDSGTLTLGLLLRPEGLTSVLELGPEADQPEAAKFRQFWGSRSELRRFQDGAIREA
Sbjct: 541  PPKHKDSGTLTLGLLLRPEGLTSVLELGPEADQPEAAKFRQFWGSRSELRRFQDGAIREA 600

Query: 601  VVWEAASMSQKRLIPHQVVTHLLALHADIPETCVHYVGGPLDALIQGLKETSSTGEEALV 660
            VVWEAASMSQKRLIPHQVVTHLLALHADIPETCVHYVGGPLDALIQGLKETSSTGEEALV
Sbjct: 601  VVWEAASMSQKRLIPHQVVTHLLALHADIPETCVHYVGGPLDALIQGLKETSSTGEEALV 660

Query: 661  AAVRCYDDLSRLLWGLEGLPLTVSAVQGAHPVLRYTEVFPPTPVRPAFSFYETLRERSSL 720
            AAVRCYDDLSRLLWGLEGLPLTVSAVQGAHPVLRYTEVFPPTPVRPAFSFYETLRERSSL
Sbjct: 661  AAVRCYDDLSRLLWGLEGLPLTVSAVQGAHPVLRYTEVFPPTPVRPAFSFYETLRERSSL 720

Query: 721  LPRLDKPCPAYVEPMTVVCHLEGSGQWPQDAEAVQRVRAAFQLRLAELLTQQHGLQCRAT 780
            LPRLDKPCPAYVEPMTVVCHLEGSGQWPQDAEAVQRVRAAFQLRLAELLTQQHGLQCRAT
Sbjct: 721  LPRLDKPCPAYVEPMTVVCHLEGSGQWPQDAEAVQRVRAAFQLRLAELLTQQHGLQCRAT 780

Query: 781  ATHTDVLKDGFVFRIRVAYQREPQILKEVQSPEGMISLRDTAASLRLERDTRQLPLLTSA 840
            ATHTDVLKDGFVFRIRVAYQREPQILKEVQSPEGMISLRDTAASLRLERDTRQLPLLTSA
Sbjct: 781  ATHTDVLKDGFVFRIRVAYQREPQILKEVQSPEGMISLRDTAASLRLERDTRQLPLLTSA 840

Query: 841  LHGLQQQHPAFSGVARLAKRWVRAQLLGEGFADESLDLVAAALFLHPEPFTPPSSPQVGF 900
            LHGLQQQHPAFSGVARLAKRWVRAQLLGEGFADESLDLVAAALFLHPEPFTPPSSPQVGF
Sbjct: 841  LHGLQQQHPAFSGVARLAKRWVRAQLLGEGFADESLDLVAAALFLHPEPFTPPSSPQVGF 900

Query: 901  LRFLFLVSTFDWKNNPLFVNLNNELTVEEQVEIRSGFLAARAQLPVMVIVTPQDRKNSVW 960
            LRFLFLVSTFDWKNNPLFVNLNNELTVEEQVEIRSGFLAARAQLPVMVIVTPQDRKNSVW
Sbjct: 901  LRFLFLVSTFDWKNNPLFVNLNNELTVEEQVEIRSGFLAARAQLPVMVIVTPQDRKNSVW 960

Query: 961  TQDGPSAQILQQLVVLAAEALPMLEKQLMDPRGPGDIRTVFRPPLDIYDVLIRLSPRHIP 1020
            TQDGPSAQILQQLVVLAAEALPMLEKQLMDPRGPGDIRTVFRPPLDIYDVLIRLSPRHIP
Sbjct: 961  TQDGPSAQILQQLVVLAAEALPMLEKQLMDPRGPGDIRTVFRPPLDIYDVLIRLSPRHIP 1020

Query: 1021 RHRQAVDSPAASFCRGLLSQPGPSSLMPVLGYDPPQLYLTQLREAFGDLALFFYDQHGGE 1080
            RHRQAVDSPAASFCRGLLSQPGPSSLMPVLGYDPPQLYLTQLREAFGDLALFFYDQHGGE
Sbjct: 1021 RHRQAVDSPAASFCRGLLSQPGPSSLMPVLGYDPPQLYLTQLREAFGDLALFFYDQHGGE 1080

Query: 1081 VIGVLWKPTSFQPQPFKASSTKGRMVMSRGGELVMVPNVEAILEDFAVLGEGLVQTVEAR 1140
            VIGVLWKPTSFQPQPFKASSTKGRMVMSRGGELVMVPNVEAILEDFAVLGEGLVQTVEAR
Sbjct: 1081 VIGVLWKPTSFQPQPFKASSTKGRMVMSRGGELVMVPNVEAILEDFAVLGEGLVQTVEAR 1140

Query: 1141 SERWTV 1146
            SERWTV
Sbjct: 1141 SERWTV 1146


>gi|22212931 nucleolar protein family 6 gamma isoform [Homo sapiens]
          Length = 699

 Score = 1314 bits (3400), Expect = 0.0
 Identities = 653/654 (99%), Positives = 653/654 (99%)

Query: 1   MGPAPAGEQLRGATGEPEVMEPALEGTGKEGKKASSRKRTLAEPPAKGLLQPVKLSRAEL 60
           MGPAPAGEQLRGATGEPEVMEPALEGTGKEGKKASSRKRTLAEPPAKGLLQPVKLSRAEL
Sbjct: 1   MGPAPAGEQLRGATGEPEVMEPALEGTGKEGKKASSRKRTLAEPPAKGLLQPVKLSRAEL 60

Query: 61  YKEPTNEELNRLRETEILFHSSLLRLQVEELLKEVRLSEKKKDRIDAFLREVNQRVVRVP 120
           YKEPTNEELNRLRETEILFHSSLLRLQVEELLKEVRLSEKKKDRIDAFLREVNQRVVRVP
Sbjct: 61  YKEPTNEELNRLRETEILFHSSLLRLQVEELLKEVRLSEKKKDRIDAFLREVNQRVVRVP 120

Query: 121 SVPETELTDQAWLPAGVRVPLHQVPYAVKGCFRFLPPAQVTVVGSYLLGTCIRPDINVDV 180
           SVPETELTDQAWLPAGVRVPLHQVPYAVKGCFRFLPPAQVTVVGSYLLGTCIRPDINVDV
Sbjct: 121 SVPETELTDQAWLPAGVRVPLHQVPYAVKGCFRFLPPAQVTVVGSYLLGTCIRPDINVDV 180

Query: 181 ALTMPREILQDKDGLNQRYFRKRALYLAHLAHHLAQDPLFGSVCFSYTNGCHLKPSLLLR 240
           ALTMPREILQDKDGLNQRYFRKRALYLAHLAHHLAQDPLFGSVCFSYTNGCHLKPSLLLR
Sbjct: 181 ALTMPREILQDKDGLNQRYFRKRALYLAHLAHHLAQDPLFGSVCFSYTNGCHLKPSLLLR 240

Query: 241 PRGKDERLVTVRLHPCPPPDFFRPCRLLPTKNNVRSAWYRGQSPAGDGSPEPPTPRYNTW 300
           PRGKDERLVTVRLHPCPPPDFFRPCRLLPTKNNVRSAWYRGQSPAGDGSPEPPTPRYNTW
Sbjct: 241 PRGKDERLVTVRLHPCPPPDFFRPCRLLPTKNNVRSAWYRGQSPAGDGSPEPPTPRYNTW 300

Query: 301 VLQDTVLESHLQLLSTILSSAQGLKDGVALLKVWLRQRELDKGQGGFTGFLVSMLVVFLV 360
           VLQDTVLESHLQLLSTILSSAQGLKDGVALLKVWLRQRELDKGQGGFTGFLVSMLVVFLV
Sbjct: 301 VLQDTVLESHLQLLSTILSSAQGLKDGVALLKVWLRQRELDKGQGGFTGFLVSMLVVFLV 360

Query: 361 STRKIHTTMSGYQVLRSVLQFLATTDLTVNGISLCLSSDPSLPALADFHQAFSVVFLDSS 420
           STRKIHTTMSGYQVLRSVLQFLATTDLTVNGISLCLSSDPSLPALADFHQAFSVVFLDSS
Sbjct: 361 STRKIHTTMSGYQVLRSVLQFLATTDLTVNGISLCLSSDPSLPALADFHQAFSVVFLDSS 420

Query: 421 GHLNLCADVTASTYHQVQHEARLSMMLLDSRADDGFHLLLMTPKPMIRAFDHVLHLRPLS 480
           GHLNLCADVTASTYHQVQHEARLSMMLLDSRADDGFHLLLMTPKPMIRAFDHVLHLRPLS
Sbjct: 421 GHLNLCADVTASTYHQVQHEARLSMMLLDSRADDGFHLLLMTPKPMIRAFDHVLHLRPLS 480

Query: 481 RLQAACHRLKLWPELQDNGGDYVSAALGPLTTLLEQGLGARLNLLAHSRPPVPEWDISQD 540
           RLQAACHRLKLWPELQDNGGDYVSAALGPLTTLLEQGLGARLNLLAHSRPPVPEWDISQD
Sbjct: 481 RLQAACHRLKLWPELQDNGGDYVSAALGPLTTLLEQGLGARLNLLAHSRPPVPEWDISQD 540

Query: 541 PPKHKDSGTLTLGLLLRPEGLTSVLELGPEADQPEAAKFRQFWGSRSELRRFQDGAIREA 600
           PPKHKDSGTLTLGLLLRPEGLTSVLELGPEADQPEAAKFRQFWGSRSELRRFQDGAIREA
Sbjct: 541 PPKHKDSGTLTLGLLLRPEGLTSVLELGPEADQPEAAKFRQFWGSRSELRRFQDGAIREA 600

Query: 601 VVWEAASMSQKRLIPHQVVTHLLALHADIPETCVHYVGGPLDALIQGLKETSST 654
           VVWEAASMSQKRLIPHQVVTHLLALHADIPETCVHYVGGPLDALIQGLKE SST
Sbjct: 601 VVWEAASMSQKRLIPHQVVTHLLALHADIPETCVHYVGGPLDALIQGLKEASST 654



 Score = 97.4 bits (241), Expect = 7e-20
 Identities = 49/50 (98%), Positives = 50/50 (100%)

Query: 1097 KASSTKGRMVMSRGGELVMVPNVEAILEDFAVLGEGLVQTVEARSERWTV 1146
            +ASSTKGRMVMSRGGELVMVPNVEAILEDFAVLGEGLVQTVEARSERWTV
Sbjct: 650  EASSTKGRMVMSRGGELVMVPNVEAILEDFAVLGEGLVQTVEARSERWTV 699


>gi|31543140 Usher syndrome 1C binding protein 1 [Homo sapiens]
          Length = 703

 Score = 43.1 bits (100), Expect = 0.002
 Identities = 68/281 (24%), Positives = 109/281 (38%), Gaps = 46/281 (16%)

Query: 536 DISQDPPKHKDSGTLTLGLLLRPEGLTSVLELGPEADQPEA-------AKFRQFWGSRSE 588
           +  ++P + +DS +L   LL R    +S   LG   +QP +       A+  Q  GS  +
Sbjct: 247 EADREPWETQDSFSLAHPLLRRLRSHSSTQILGSLPNQPLSPEMHIMEAQMEQLRGSIEK 306

Query: 589 LRRFQDGAIREAVVW------EAASMSQKRLIPHQVVTHLLALHADIPETCVHYVGGPLD 642
           L+ F    +  AV+       E  SM   +        HL   +++  E           
Sbjct: 307 LKCFN--RLLSAVLQGYKGRCEGLSMQLGQREAEATALHLALQYSEHCEEAYR------- 357

Query: 643 ALIQGLKETSS-TGEEALVAAVRCYDDLSRLLWGLEGLPLTVSAVQGAHPVLRYTEVFPP 701
            ++  L+E  S  G+EA ++ ++  +  +  L   E   +   A Q   P    + V  P
Sbjct: 358 -VLLALREADSGAGDEAPMSDLQAAEKEAWRLLAQEEAAMDAGAQQNPQPSPEGSSVDKP 416

Query: 702 TPVRPAF---SFYETLRERSSLLPRLDKPCPAYVEPMTVVCHLEG--------------- 743
           TP   AF   S+ + L+ER SL+  L +P P  + PM  V   E                
Sbjct: 417 TPQEVAFQLRSYVQRLQERRSLMKILSEPGPT-LAPMPTVPRAEAMVQAILGTQAGPALP 475

Query: 744 ---SGQWPQDAEAVQRVRAAFQLRLAELLTQQHGLQCRATA 781
                Q  QD  A +   A   LRL  +  ++ GL+ R  A
Sbjct: 476 RLEKTQIQQDLVAAREALADLMLRLQLVRREKRGLELREAA 516


>gi|24307933 transcription factor EB [Homo sapiens]
          Length = 476

 Score = 34.7 bits (78), Expect = 0.53
 Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 6/79 (7%)

Query: 824 SLRLERDTRQLPL------LTSALHGLQQQHPAFSGVARLAKRWVRAQLLGEGFADESLD 877
           S RLE   +QL L      + + +HGL    P+   +A LA++ V+ +L  E    E+L 
Sbjct: 302 SRRLEMTNKQLWLRIQELEMQARVHGLPTTSPSGMNMAELAQQVVKQELPSEEGPGEALM 361

Query: 878 LVAAALFLHPEPFTPPSSP 896
           L A      P P  PP +P
Sbjct: 362 LGAEVPDPEPLPALPPQAP 380


>gi|91208415 mesenchyme homeobox 1 isoform 3 [Homo sapiens]
          Length = 139

 Score = 34.7 bits (78), Expect = 0.53
 Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 2/101 (1%)

Query: 1   MGPAPAGEQLRGATGEPEVMEPALEGTGKEGKKASSRKRTLAEPPAKGLLQPVKLSRAEL 60
           MG +  G  L   TG P      L  T  E +K SSR+R  +    +   +P   S+A  
Sbjct: 1   MGTSSLG--LVDTTGGPGDDYGVLGSTANETEKKSSRRRKESSDNQENRGKPEGSSKARK 58

Query: 61  YKEPTNEELNRLRETEILFHSSLLRLQVEELLKEVRLSEKK 101
            +    +E  R  E E   H+ L RL+  E+   + LSE++
Sbjct: 59  ERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQ 99


>gi|4758710 mesenchyme homeobox 1 isoform 1 [Homo sapiens]
          Length = 254

 Score = 34.7 bits (78), Expect = 0.53
 Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 2/101 (1%)

Query: 1   MGPAPAGEQLRGATGEPEVMEPALEGTGKEGKKASSRKRTLAEPPAKGLLQPVKLSRAEL 60
           MG +  G  L   TG P      L  T  E +K SSR+R  +    +   +P   S+A  
Sbjct: 116 MGTSSLG--LVDTTGGPGDDYGVLGSTANETEKKSSRRRKESSDNQENRGKPEGSSKARK 173

Query: 61  YKEPTNEELNRLRETEILFHSSLLRLQVEELLKEVRLSEKK 101
            +    +E  R  E E   H+ L RL+  E+   + LSE++
Sbjct: 174 ERTAFTKEQLRELEAEFAHHNYLTRLRRYEIAVNLDLSERQ 214


>gi|115392150 hypothetical protein LOC644815 [Homo sapiens]
          Length = 823

 Score = 33.5 bits (75), Expect = 1.2
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 9/55 (16%)

Query: 252 RLHPCPPPDFFRPCRLLPTKNNVRSAWYRGQSPAGDGSPEPPTPRYNTWVLQDTV 306
           R  PCPPP+   P   +P +N +         P GD  P PP P+  T  + D +
Sbjct: 471 RPEPCPPPEPSAPQDGVPAENGL---------PQGDPEPLPPVPKPRTVPVADVL 516


>gi|4506967 v-ski sarcoma viral oncogene homolog [Homo sapiens]
          Length = 728

 Score = 33.1 bits (74), Expect = 1.6
 Identities = 36/145 (24%), Positives = 53/145 (36%), Gaps = 12/145 (8%)

Query: 648 LKETSSTGEEALVAA---VRCYDDLSRLLWGLEGLPLTVSAVQGAHPVLRYTEVFPPTPV 704
           L   SS G  A  +A      Y   S    G   +P  V A     PVL    + PP PV
Sbjct: 26  LSSMSSLGGPAAFSARWAQEAYKKESAKEAGAAAVPAPVPAATEPPPVLHLPAIQPPPPV 85

Query: 705 RPAFSFYETLRERSSLLPRLDKPCPAYVEPMTVVCHLEGSGQWPQDAEAVQRVRAAFQLR 764
            P   F  +         R  + C   +E  T+ C + G  +     + +  V   F L+
Sbjct: 86  LPGPFFMPS--------DRSTERCETVLEGETISCFVVGGEKRLCLPQILNSVLRDFSLQ 137

Query: 765 LAELLTQQHGLQC-RATATHTDVLK 788
               +  +  + C R TA   ++LK
Sbjct: 138 QINAVCDELHIYCSRCTADQLEILK 162


>gi|57165355 latrophilin 1 isoform 1 precursor [Homo sapiens]
          Length = 1474

 Score = 33.1 bits (74), Expect = 1.6
 Identities = 29/93 (31%), Positives = 37/93 (39%), Gaps = 24/93 (25%)

Query: 228  TNGCHLKPSLLLRPRGKDERLVT-----VRLHPCPPPDFFRP---------------CRL 267
            T G HL  + +L+PRG      T     V  +P  PP F  P               C +
Sbjct: 1180 TMGNHLLTNPVLQPRGGTSPYNTLIAESVGFNPSSPPVFNSPGSYREPKHPLGGREACGM 1239

Query: 268  --LPTKNNVRSAWY--RGQSPAGDGSPEPPTPR 296
              LP   N  +++    G  P GDG PEPP  R
Sbjct: 1240 DTLPLNGNFNNSYSLRSGDFPPGDGGPEPPRGR 1272


>gi|41281557 latrophilin 1 isoform 2 precursor [Homo sapiens]
          Length = 1469

 Score = 33.1 bits (74), Expect = 1.6
 Identities = 29/93 (31%), Positives = 37/93 (39%), Gaps = 24/93 (25%)

Query: 228  TNGCHLKPSLLLRPRGKDERLVT-----VRLHPCPPPDFFRP---------------CRL 267
            T G HL  + +L+PRG      T     V  +P  PP F  P               C +
Sbjct: 1175 TMGNHLLTNPVLQPRGGTSPYNTLIAESVGFNPSSPPVFNSPGSYREPKHPLGGREACGM 1234

Query: 268  --LPTKNNVRSAWY--RGQSPAGDGSPEPPTPR 296
              LP   N  +++    G  P GDG PEPP  R
Sbjct: 1235 DTLPLNGNFNNSYSLRSGDFPPGDGGPEPPRGR 1267


>gi|157168355 CD22 molecule [Homo sapiens]
          Length = 847

 Score = 32.7 bits (73), Expect = 2.0
 Identities = 38/178 (21%), Positives = 69/178 (38%), Gaps = 32/178 (17%)

Query: 665 CYDDLSRLLWGLEGLPLTVSAVQGAHPVLRYTEVFPPTPVRPAFSFY------------- 711
           CY    +L W LEG+P+  +AV      ++           P +S +             
Sbjct: 167 CYGYPIQLQWLLEGVPMRQAAVTSTSLTIKSVFTRSELKFSPQWSHHGKIVTCQLQDADG 226

Query: 712 -----ETLRERSSLLPRLD---KPCPAYV---EPMTVVCHLEGSG------QWPQDAEAV 754
                +T++      P+L+    P  A V   + +T+ C +  S        W +D  ++
Sbjct: 227 KFLSNDTVQLNVKHTPKLEIKVTPSDAIVREGDSVTMTCEVSSSNPEYTTVSWLKDGTSL 286

Query: 755 QRVRAAFQLRLAELLTQQHGLQCRATATHTDVLKDGFVFRIRVAYQREPQILKEVQSP 812
           ++ +  F L L E+   Q G  C   +      +   VF ++V Y  EP  ++ + SP
Sbjct: 287 KK-QNTFTLNLREVTKDQSGKYCCQVSNDVGPGRSEEVF-LQVQYAPEPSTVQILHSP 342


>gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo
           sapiens]
          Length = 1293

 Score = 32.0 bits (71), Expect = 3.5
 Identities = 25/91 (27%), Positives = 37/91 (40%)

Query: 40  TLAEPPAKGLLQPVKLSRAELYKEPTNEELNRLRETEILFHSSLLRLQVEELLKEVRLSE 99
           T   P  + L Q  K   A+L +E    E+   RE E       LR Q EE+L+  +  E
Sbjct: 711 TTPGPALEQLQQLEKAKAAKLEQERREAEMRAKREEEERKRQEELRRQQEEILRRQQEEE 770

Query: 100 KKKDRIDAFLREVNQRVVRVPSVPETELTDQ 130
           +K+   +   R   +  +R     E  L  Q
Sbjct: 771 RKRREEEELARRKQEEALRRQREQEIALRRQ 801


>gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo
           sapiens]
          Length = 1320

 Score = 32.0 bits (71), Expect = 3.5
 Identities = 25/91 (27%), Positives = 37/91 (40%)

Query: 40  TLAEPPAKGLLQPVKLSRAELYKEPTNEELNRLRETEILFHSSLLRLQVEELLKEVRLSE 99
           T   P  + L Q  K   A+L +E    E+   RE E       LR Q EE+L+  +  E
Sbjct: 738 TTPGPALEQLQQLEKAKAAKLEQERREAEMRAKREEEERKRQEELRRQQEEILRRQQEEE 797

Query: 100 KKKDRIDAFLREVNQRVVRVPSVPETELTDQ 130
           +K+   +   R   +  +R     E  L  Q
Sbjct: 798 RKRREEEELARRKQEEALRRQREQEIALRRQ 828


>gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo
           sapiens]
          Length = 1299

 Score = 32.0 bits (71), Expect = 3.5
 Identities = 25/91 (27%), Positives = 37/91 (40%)

Query: 40  TLAEPPAKGLLQPVKLSRAELYKEPTNEELNRLRETEILFHSSLLRLQVEELLKEVRLSE 99
           T   P  + L Q  K   A+L +E    E+   RE E       LR Q EE+L+  +  E
Sbjct: 717 TTPGPALEQLQQLEKAKAAKLEQERREAEMRAKREEEERKRQEELRRQQEEILRRQQEEE 776

Query: 100 KKKDRIDAFLREVNQRVVRVPSVPETELTDQ 130
           +K+   +   R   +  +R     E  L  Q
Sbjct: 777 RKRREEEELARRKQEEALRRQREQEIALRRQ 807


>gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo
           sapiens]
          Length = 1299

 Score = 32.0 bits (71), Expect = 3.5
 Identities = 25/91 (27%), Positives = 37/91 (40%)

Query: 40  TLAEPPAKGLLQPVKLSRAELYKEPTNEELNRLRETEILFHSSLLRLQVEELLKEVRLSE 99
           T   P  + L Q  K   A+L +E    E+   RE E       LR Q EE+L+  +  E
Sbjct: 717 TTPGPALEQLQQLEKAKAAKLEQERREAEMRAKREEEERKRQEELRRQQEEILRRQQEEE 776

Query: 100 KKKDRIDAFLREVNQRVVRVPSVPETELTDQ 130
           +K+   +   R   +  +R     E  L  Q
Sbjct: 777 RKRREEEELARRKQEEALRRQREQEIALRRQ 807


>gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]
          Length = 1192

 Score = 31.6 bits (70), Expect = 4.5
 Identities = 22/61 (36%), Positives = 25/61 (40%), Gaps = 4/61 (6%)

Query: 239 LRPR-GKDERLVTVRLHPCPPPDFFRPCRLLPTKNNVRSAWYRGQSPAGDGSP---EPPT 294
           L PR GK + L    LHP PP     P  L PT +   +       P G   P   EPP 
Sbjct: 266 LSPRKGKSKTLDNSDLHPGPPAGSPPPLTLPPTPSPATAVTAASAQPPGPAPPITLEPPA 325

Query: 295 P 295
           P
Sbjct: 326 P 326


>gi|31317301 nitric oxide synthase 1 (neuronal) adaptor protein
           isoform 1 [Homo sapiens]
          Length = 506

 Score = 31.6 bits (70), Expect = 4.5
 Identities = 38/113 (33%), Positives = 51/113 (45%), Gaps = 17/113 (15%)

Query: 72  LRETEILFHSSLLRLQVEELLKEVRLSEKKKDRIDAFLREVNQR-----VVRVPSVPETE 126
           L+  ++L H SLL  QV+EL  E++LS +        L E+  R     V+  P+ P+ E
Sbjct: 340 LQNKDMLQHISLLVKQVQEL--ELKLSGQNAMGSQDSLLEITFRSGALPVLCDPTTPKPE 397

Query: 127 LTDQAWLPAGVR-------VPLHQVPYAVK-GCFRFLPPAQV--TVVGSYLLG 169
                 L AG+         PL +    VK  CFRFLPP        G  LLG
Sbjct: 398 DLHSPPLGAGLADFAHPAGSPLGRRDCLVKLECFRFLPPEDTPPPAQGEALLG 450


>gi|205277334 nitric oxide synthase 1 (neuronal) adaptor protein
           isoform 2 [Homo sapiens]
          Length = 211

 Score = 31.6 bits (70), Expect = 4.5
 Identities = 38/113 (33%), Positives = 51/113 (45%), Gaps = 17/113 (15%)

Query: 72  LRETEILFHSSLLRLQVEELLKEVRLSEKKKDRIDAFLREVNQR-----VVRVPSVPETE 126
           L+  ++L H SLL  QV+EL  E++LS +        L E+  R     V+  P+ P+ E
Sbjct: 45  LQNKDMLQHISLLVKQVQEL--ELKLSGQNAMGSQDSLLEITFRSGALPVLCDPTTPKPE 102

Query: 127 LTDQAWLPAGVR-------VPLHQVPYAVK-GCFRFLPPAQV--TVVGSYLLG 169
                 L AG+         PL +    VK  CFRFLPP        G  LLG
Sbjct: 103 DLHSPPLGAGLADFAHPAGSPLGRRDCLVKLECFRFLPPEDTPPPAQGEALLG 155


>gi|17402909 tripartite motif protein TRIM29 [Homo sapiens]
          Length = 588

 Score = 31.2 bits (69), Expect = 5.9
 Identities = 16/44 (36%), Positives = 25/44 (56%)

Query: 65  TNEELNRLRETEILFHSSLLRLQVEELLKEVRLSEKKKDRIDAF 108
           T EE    +ETE+      L+L++ E+  E    +K+KDRI +F
Sbjct: 259 TVEEAKAEKETELSLQKEQLQLKIIEIEDEAEKWQKEKDRIKSF 302


>gi|24429572 TBP-associated factor RNA polymerase 1-like [Homo
            sapiens]
          Length = 1826

 Score = 31.2 bits (69), Expect = 5.9
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 1023 RQAVDSPAASFCRGLLSQPGPSSLMPVLGYDPPQLYL-TQLREAFGDLALFF 1073
            RQ    P   +  G LSQPGP S+ P+L +   +  +  Q R+A G   LFF
Sbjct: 632  RQFHRPPLKKYSFGALSQPGPHSVQPLLKHIKKKAKMREQERQASGGGELFF 683


>gi|239756270 PREDICTED: StAR-related lipid transfer (START) domain
            containing 9 [Homo sapiens]
          Length = 4614

 Score = 30.8 bits (68), Expect = 7.7
 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)

Query: 609  SQKRLIPHQVVTHLLALHADIPETCVHYVGGPLDALIQGLKETSSTGE 656
            S++  IP QV    L+L  ++ E  +H+  G  DAL+Q L+  S TGE
Sbjct: 4106 SKREQIPLQVGAQNLSLSVELTEAKLHHGFGEADALLQVLQ--SGTGE 4151


>gi|239750815 PREDICTED: StAR-related lipid transfer (START) domain
            containing 9 [Homo sapiens]
          Length = 4614

 Score = 30.8 bits (68), Expect = 7.7
 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)

Query: 609  SQKRLIPHQVVTHLLALHADIPETCVHYVGGPLDALIQGLKETSSTGE 656
            S++  IP QV    L+L  ++ E  +H+  G  DAL+Q L+  S TGE
Sbjct: 4106 SKREQIPLQVGAQNLSLSVELTEAKLHHGFGEADALLQVLQ--SGTGE 4151


>gi|239745175 PREDICTED: StAR-related lipid transfer (START) domain
            containing 9 [Homo sapiens]
          Length = 4614

 Score = 30.8 bits (68), Expect = 7.7
 Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)

Query: 609  SQKRLIPHQVVTHLLALHADIPETCVHYVGGPLDALIQGLKETSSTGE 656
            S++  IP QV    L+L  ++ E  +H+  G  DAL+Q L+  S TGE
Sbjct: 4106 SKREQIPLQVGAQNLSLSVELTEAKLHHGFGEADALLQVLQ--SGTGE 4151


>gi|156104874 envoplakin [Homo sapiens]
          Length = 2033

 Score = 30.8 bits (68), Expect = 7.7
 Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 16/105 (15%)

Query: 38   KRTLAEPPAKGLLQPVKLSRAEL----YKEPTNEELNRLRETEILFHSSLLRLQVEELLK 93
            KR+  E   + LL  +++ RA+     YKE T E +   R  E+L     L+ Q+ EL+ 
Sbjct: 1223 KRSGVEKEVEKLLPDLEVLRAQKPTVEYKEVTQEVVRHERSPEVLREIDRLKAQLNELVN 1282

Query: 94   E--------VRL----SEKKKDRIDAFLREVNQRVVRVPSVPETE 126
                     +RL     E +++R     + V++ VVR    P  E
Sbjct: 1283 SHGRSQEQLIRLQGERDEWRRERAKVETKTVSKEVVRHEKDPVLE 1327


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.137    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,016,906
Number of Sequences: 37866
Number of extensions: 2433123
Number of successful extensions: 6404
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 6371
Number of HSP's gapped (non-prelim): 44
length of query: 1146
length of database: 18,247,518
effective HSP length: 113
effective length of query: 1033
effective length of database: 13,968,660
effective search space: 14429625780
effective search space used: 14429625780
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.