Guide to the Human Genome
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Name: SAV1 Sequence: fasta or formatted (383aa) NCBI GI: 11141889
Description:

WW45 protein

Referenced in:

WW Domain

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         20           2
 C cysteine            0.5          2           1
 D aspartate           5.0         19           1
 E glutamate           6.3         24           1
 F phenylalanine       3.1         12           2
 G glycine             5.2         20           1
 H histidine           3.7         14           1
 I isoleucine          2.6         10           1
 K lysine              4.7         18           2
 L leucine             8.1         31           2
 M methionine          2.1          8           1
 N asparagine          4.7         18           1
 P proline             7.8         30           3
 Q glutamine           6.3         24           2
 R arginine            8.4         32           2
 S serine              7.8         30           2
 T threonine           5.5         21           2
 V valine              5.0         19           2
 W tryptophan          1.8          7           1
 Y tyrosine            6.3         24           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WW45 protein 
MAGI1                 0.064   membrane associated guanylate kinase, WW and PDZ dom...
MAGI1                 0.064   membrane associated guanylate kinase, WW and PDZ dom...
MAGI1                 0.064   membrane associated guanylate kinase, WW and PDZ dom...
MAGI3                 0.064   membrane-associated guanylate kinase-related  3 iso...
MAGI3                 0.064   membrane-associated guanylate kinase-related  3 iso...
MAGI2                 0.064   membrane associated guanylate kinase, WW and PDZ dom...
WWP1                  0.060   WW domain containing E3 ubiquitin protein ligase 1 [...
WWP2                  0.058   WW domain containing E3 ubiquitin protein ligase 2 i...
ITCH                  0.058   itchy homolog E3 ubiquitin protein ligase 
WWC2                  0.051   WW and C2 domain containing 2 
WWC1                  0.048   WW and C2 domain containing 1 isoform 3 
WWC1                  0.048   WW and C2 domain containing 1 isoform 2 
WWC1                  0.048   WW and C2 domain containing 1 isoform 1 
NEDD4L                0.045   neural precursor cell expressed, developmentally do...
NEDD4L                0.045   neural precursor cell expressed, developmentally dow...
NEDD4L                0.045   neural precursor cell expressed, developmentally do...
NEDD4L                0.045   neural precursor cell expressed, developmentally do...
NEDD4L                0.045   neural precursor cell expressed, developmentally do...
NEDD4L                0.045   neural precursor cell expressed, developmentally do...
NEDD4L                0.045   neural precursor cell expressed, developmentally do...
NEDD4L                0.045   neural precursor cell expressed, developmentally do...
NEDD4L                0.045   neural precursor cell expressed, developmentally do...
WWOX                  0.042   WW domain-containing oxidoreductase isoform 1 
WWOX                  0.042   WW domain-containing oxidoreductase isoform 2 
NEDD4                 0.039   neural precursor cell expressed, developmentally do...
NEDD4                 0.039   neural precursor cell expressed, developmentally do...
YAP1                  0.037   Yes-associated protein 1, 65kDa isoform 1 
PLEKHA5               0.036   pleckstrin homology domain containing, family A memb...
SMURF1                0.035   Smad ubiquitination regulatory factor 1 isoform 2 [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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