Guide to the Human Genome
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Name: YAP1 Sequence: fasta or formatted (504aa) NCBI GI: 194306653
Description:

Yes-associated protein 1, 65kDa isoform 1

Referenced in:

Non-Receptor Tyrosine Kinase Pathways
WW Domain

Other entries for this name:
alt prot [454aa] Yes-associated protein 1, 65kDa isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         37           2
 C cysteine            0.2          1           1
 D aspartate           5.6         28           2
 E glutamate           4.6         23           2
 F phenylalanine       2.0         10           2
 G glycine             6.9         35           2
 H histidine           1.8          9           1
 I isoleucine          2.2         11           1
 K lysine              2.8         14           1
 L leucine             8.3         42           2
 M methionine          4.2         21           2
 N asparagine          4.8         24           1
 P proline            11.9         60           3
 Q glutamine          10.1         51           4
 R arginine            4.2         21           1
 S serine              9.9         50           2
 T threonine           7.3         37           3
 V valine              3.8         19           2
 W tryptophan          1.0          5           1
 Y tyrosine            1.2          6           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Yes-associated protein 1, 65kDa isoform 1 
YAP1                  0.856   Yes-associated protein 1, 65kDa isoform 2 
WWTR1                 0.308   WW domain containing transcription regulator 1 [Homo...
NEDD4L                0.060   neural precursor cell expressed, developmentally do...
NEDD4L                0.060   neural precursor cell expressed, developmentally dow...
NEDD4L                0.060   neural precursor cell expressed, developmentally do...
NEDD4L                0.060   neural precursor cell expressed, developmentally do...
NEDD4L                0.060   neural precursor cell expressed, developmentally do...
NEDD4L                0.060   neural precursor cell expressed, developmentally do...
NEDD4L                0.060   neural precursor cell expressed, developmentally do...
NEDD4L                0.060   neural precursor cell expressed, developmentally do...
NEDD4L                0.060   neural precursor cell expressed, developmentally do...
NEDD4                 0.057   neural precursor cell expressed, developmentally do...
NEDD4                 0.057   neural precursor cell expressed, developmentally do...
SMURF1                0.056   Smad ubiquitination regulatory factor 1 isoform 1 [H...
WWP1                  0.051   WW domain containing E3 ubiquitin protein ligase 1 [...
WWP2                  0.050   WW domain containing E3 ubiquitin protein ligase 2 i...
SMURF1                0.050   Smad ubiquitination regulatory factor 1 isoform 2 [H...
ITCH                  0.049   itchy homolog E3 ubiquitin protein ligase 
SMURF2                0.046   SMAD specific E3 ubiquitin protein ligase 2 
MAGI1                 0.046   membrane associated guanylate kinase, WW and PDZ dom...
MAGI1                 0.046   membrane associated guanylate kinase, WW and PDZ dom...
MAGI1                 0.046   membrane associated guanylate kinase, WW and PDZ dom...
WWC1                  0.045   WW and C2 domain containing 1 isoform 3 
WWC1                  0.045   WW and C2 domain containing 1 isoform 2 
WWC1                  0.045   WW and C2 domain containing 1 isoform 1 
WWOX                  0.043   WW domain-containing oxidoreductase isoform 1 
WWOX                  0.043   WW domain-containing oxidoreductase isoform 2 
MAGI2                 0.040   membrane associated guanylate kinase, WW and PDZ dom...
MAGI3                 0.037   membrane-associated guanylate kinase-related  3 iso...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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