Guide to the Human Genome
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Name: MAGI2 Sequence: fasta or formatted (1455aa) NCBI GI: 27436957
Description:

membrane associated guanylate kinase, WW and PDZ domain containing 2

Referenced in:

Gene Structure
PDZ Domain

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4        108           4
 C cysteine            1.0         14           1
 D aspartate           5.9         86           2
 E glutamate           7.2        105           6
 F phenylalanine       2.4         35           2
 G glycine             8.8        128           4
 H histidine           2.6         38           2
 I isoleucine          4.6         67           2
 K lysine              5.3         77           3
 L leucine             7.1        104           3
 M methionine          1.8         26           1
 N asparagine          3.1         45           1
 P proline            10.9        159           3
 Q glutamine           4.7         68           2
 R arginine            6.2         90           2
 S serine              7.5        109           2
 T threonine           4.3         63           2
 V valine              5.6         82           3
 W tryptophan          0.6          9           1
 Y tyrosine            2.9         42           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   membrane associated guanylate kinase, WW and PDZ dom... 
MAGI3                 0.366   membrane-associated guanylate kinase-related  3 iso...
MAGI3                 0.365   membrane-associated guanylate kinase-related  3 iso...
MAGI1                 0.321   membrane associated guanylate kinase, WW and PDZ dom...
MAGI1                 0.321   membrane associated guanylate kinase, WW and PDZ dom...
MAGI1                 0.321   membrane associated guanylate kinase, WW and PDZ dom...
MPDZ                  0.028   multiple PDZ domain protein 
PTPN13                0.026   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.026   protein tyrosine phosphatase, non-receptor type 13 i...
PTPN13                0.026   protein tyrosine phosphatase, non-receptor type 13 is...
PTPN13                0.025   protein tyrosine phosphatase, non-receptor type 13 i...
INADL                 0.023   InaD-like 
WWC2                  0.021   WW and C2 domain containing 2 
WWC1                  0.021   WW and C2 domain containing 1 isoform 3 
WWC1                  0.021   WW and C2 domain containing 1 isoform 2 
WWC1                  0.021   WW and C2 domain containing 1 isoform 1 
MAGIX                 0.021   MAGI family member, X-linked isoform a 
SCRIB                 0.020   scribble isoform b 
SCRIB                 0.020   scribble isoform a 
MAGIX                 0.020   MAGI family member, X-linked isoform b 
WWP2                  0.019   WW domain containing E3 ubiquitin protein ligase 2 i...
PARD3                 0.018   partitioning-defective protein 3 homolog 
DLG2                  0.017   chapsyn-110 isoform 3 
SAV1                  0.017   WW45 protein 
WWP1                  0.017   WW domain containing E3 ubiquitin protein ligase 1 [...
PDZD2                 0.016   PDZ domain containing 2 
NEDD4L                0.016   neural precursor cell expressed, developmentally do...
NEDD4L                0.016   neural precursor cell expressed, developmentally dow...
NEDD4L                0.016   neural precursor cell expressed, developmentally do...
NEDD4L                0.016   neural precursor cell expressed, developmentally do...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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