Guide to the Human Genome
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Name: LOC647169 Sequence: fasta or formatted (227aa) NCBI GI: 169169045
Description:

PREDICTED: similar to glutathione S-transferase alpha 3

Referenced in:

Glutathione Pathways

Other entries for this name:
alt prot [216aa] PREDICTED: similar to glutathione S-transferase alpha 3
alt prot [216aa] PREDICTED: similar to glutathione S-transferase alpha 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         13           1
 C cysteine            1.3          3           1
 D aspartate           4.4         10           1
 E glutamate           7.9         18           2
 F phenylalanine       4.4         10           1
 G glycine             3.5          8           1
 H histidine           2.6          6           1
 I isoleucine          6.2         14           1
 K lysine             10.6         24           2
 L leucine            14.5         33           2
 M methionine          2.2          5           1
 N asparagine          2.2          5           1
 P proline             4.8         11           2
 Q glutamine           3.5          8           2
 R arginine            4.0          9           1
 S serine              7.9         18           2
 T threonine           3.1          7           2
 V valine              6.2         14           1
 W tryptophan          0.9          2           1
 Y tyrosine            4.0          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to glutathione S-transferase alp... 
LOC647169             0.918   PREDICTED: similar to glutathione S-transferase alp...
LOC647169             0.913   PREDICTED: similar to glutathione S-transferase alp...
GSTA1                 0.565   glutathione S-transferase alpha 1 
GSTA3                 0.560   glutathione S-transferase alpha 3 
GSTA2                 0.551   glutathione S-transferase alpha 2 
GSTA5                 0.544   glutathione S-transferase alpha 5 
GSTA4                 0.308   glutathione S-transferase alpha 4 
GSTP1                 0.052   glutathione transferase 
GSTM3                 0.045   glutathione S-transferase mu 3 
PGDS                  0.038   prostaglandin-D synthase 
GSTM4                 0.035   glutathione S-transferase mu 4 isoform 1 
GSTM4                 0.033   glutathione S-transferase mu 4 isoform 2 
GSTM2                 0.031   glutathione S-transferase mu 2 isoform 1 
GSTZ1                 0.028   glutathione transferase zeta 1 isoform 3 
GSTZ1                 0.028   glutathione transferase zeta 1 isoform 1 
GSTM1                 0.026   glutathione S-transferase mu 1 isoform 1 
GSTM2                 0.026   glutathione S-transferase mu 2 isoform 2 
GSTM5                 0.021   glutathione S-transferase mu 5 
GSTM1                 0.019   glutathione S-transferase mu 1 isoform 2 
AGBL3                 0.016   carboxypeptidase 3, cytosolic 
EMILIN2               0.009   elastin microfibril interfacer 2 
GULP1                 0.007   GULP, engulfment adaptor PTB domain containing 1 [Hom...
NLRC5                 0.007   nucleotide-binding oligomerization domains 27 [Homo...
ASB15                 0.007   ankyrin repeat and SOCS box-containing 15 
TBC1D23               0.007   TBC1 domain family, member 23 
DNAH8                 0.007   dynein, axonemal, heavy polypeptide 8 
FBXO38                0.007   F-box protein 38 isoform a 
FBXO38                0.007   F-box protein 38 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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