Guide to the Human Genome
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Name: GSTM1 Sequence: fasta or formatted (218aa) NCBI GI: 23065544
Description:

glutathione S-transferase mu 1 isoform 1

Referenced in:

Glutathione Pathways

Other entries for this name:
alt prot [181aa] glutathione S-transferase mu 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         10           1
 C cysteine            1.8          4           1
 D aspartate           6.4         14           1
 E glutamate           8.3         18           3
 F phenylalanine       6.0         13           1
 G glycine             5.0         11           1
 H histidine           2.3          5           1
 I isoleucine          6.4         14           1
 K lysine              9.2         20           2
 L leucine            12.4         27           3
 M methionine          3.7          8           1
 N asparagine          4.6         10           1
 P proline             5.5         12           1
 Q glutamine           1.8          4           1
 R arginine            4.6         10           1
 S serine              4.6         10           2
 T threonine           2.8          6           1
 V valine              2.8          6           1
 W tryptophan          1.8          4           1
 Y tyrosine            5.5         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glutathione S-transferase mu 1 isoform 1 
GSTM4                 0.879   glutathione S-transferase mu 4 isoform 1 
GSTM5                 0.865   glutathione S-transferase mu 5 
GSTM2                 0.856   glutathione S-transferase mu 2 isoform 1 
GSTM1                 0.782   glutathione S-transferase mu 1 isoform 2 
GSTM4                 0.761   glutathione S-transferase mu 4 isoform 2 
GSTM2                 0.724   glutathione S-transferase mu 2 isoform 2 
GSTM3                 0.724   glutathione S-transferase mu 3 
GSTP1                 0.165   glutathione transferase 
PGDS                  0.111   prostaglandin-D synthase 
GSTA2                 0.079   glutathione S-transferase alpha 2 
GSTA5                 0.079   glutathione S-transferase alpha 5 
GSTA1                 0.072   glutathione S-transferase alpha 1 
GSTA3                 0.072   glutathione S-transferase alpha 3 
GSTA4                 0.046   glutathione S-transferase alpha 4 
LOC647169             0.035   PREDICTED: similar to glutathione S-transferase alp...
LOC647169             0.032   PREDICTED: similar to glutathione S-transferase alp...
LOC647169             0.026   PREDICTED: similar to glutathione S-transferase alp...
GSTT2                 0.026   glutathione S-transferase theta 2 
GSTT2B                0.026   glutathione S-transferase theta 2B 
AIMP2                 0.019   aminoacyl tRNA synthetase complex-interacting multif...
C14orf145             0.016   hypothetical protein LOC145508 
GSTO1                 0.014   glutathione-S-transferase omega 1 
GSTT1                 0.012   glutathione S-transferase theta 1 
RP1                   0.012   retinitis pigmentosa RP1 protein 
PTGES2                0.007   prostaglandin E synthase 2 
PGBD3                 0.007   hypothetical protein LOC267004 
USP14                 0.007   ubiquitin specific protease 14 isoform b 
USP14                 0.007   ubiquitin specific protease 14 isoform a 
CLN6                  0.007   CLN6 protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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