Guide to the Human Genome
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Name: LOC647169 Sequence: fasta or formatted (216aa) NCBI GI: 113417526
Description:

PREDICTED: similar to glutathione S-transferase alpha 3

Referenced in:

Glutathione Pathways

Other entries for this name:
alt prot [216aa] PREDICTED: similar to glutathione S-transferase alpha 3
alt prot [227aa] PREDICTED: similar to glutathione S-transferase alpha 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         13           1
 C cysteine            1.4          3           1
 D aspartate           4.6         10           1
 E glutamate           7.9         17           2
 F phenylalanine       4.6         10           1
 G glycine             4.2          9           1
 H histidine           2.8          6           1
 I isoleucine          6.9         15           1
 K lysine             11.1         24           2
 L leucine            13.4         29           2
 M methionine          2.3          5           1
 N asparagine          2.3          5           1
 P proline             4.6         10           2
 Q glutamine           3.2          7           2
 R arginine            4.2          9           1
 S serine              6.9         15           2
 T threonine           2.8          6           2
 V valine              6.5         14           1
 W tryptophan          0.5          1           1
 Y tyrosine            3.7          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to glutathione S-transferase alp... 
LOC647169             0.995   PREDICTED: similar to glutathione S-transferase alp...
LOC647169             0.963   PREDICTED: similar to glutathione S-transferase alp...
GSTA1                 0.598   glutathione S-transferase alpha 1 
GSTA3                 0.591   glutathione S-transferase alpha 3 
GSTA2                 0.583   glutathione S-transferase alpha 2 
GSTA5                 0.576   glutathione S-transferase alpha 5 
GSTA4                 0.328   glutathione S-transferase alpha 4 
GSTM3                 0.057   glutathione S-transferase mu 3 
GSTP1                 0.055   glutathione transferase 
GSTM4                 0.047   glutathione S-transferase mu 4 isoform 1 
GSTM4                 0.042   glutathione S-transferase mu 4 isoform 2 
GSTM2                 0.042   glutathione S-transferase mu 2 isoform 1 
GSTM1                 0.037   glutathione S-transferase mu 1 isoform 1 
GSTM2                 0.037   glutathione S-transferase mu 2 isoform 2 
PGDS                  0.035   prostaglandin-D synthase 
GSTZ1                 0.030   glutathione transferase zeta 1 isoform 3 
GSTZ1                 0.030   glutathione transferase zeta 1 isoform 1 
GSTM5                 0.025   glutathione S-transferase mu 5 
GSTM1                 0.022   glutathione S-transferase mu 1 isoform 2 
AGBL3                 0.017   carboxypeptidase 3, cytosolic 
LOC100131416          0.007   PREDICTED: hypothetical protein 
LOC100131416          0.007   PREDICTED: hypothetical protein 
LOC100131416          0.007   PREDICTED: hypothetical protein 
MPP3                  0.007   palmitoylated membrane protein 3 
EMILIN2               0.007   elastin microfibril interfacer 2 
ASB15                 0.007   ankyrin repeat and SOCS box-containing 15 
DHX16                 0.007   DEAH (Asp-Glu-Ala-His) box polypeptide 16 
TBC1D23               0.007   TBC1 domain family, member 23 
DNAH8                 0.007   dynein, axonemal, heavy polypeptide 8 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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