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Search of human proteins with 162951884
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|162951884 R3H domain containing 2 [Homo sapiens]
(976 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|162951884 R3H domain containing 2 [Homo sapiens] 1958 0.0
gi|31543535 R3H domain containing 1 [Homo sapiens] 879 0.0
gi|38261971 cyclic AMP-regulated phosphoprotein, 21 kD isoform 1... 546 e-155
gi|171460948 TSC22 domain family, member 1 isoform 1 [Homo sapiens] 74 5e-13
gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens] 73 1e-12
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 73 1e-12
gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens] 72 3e-12
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 67 1e-10
gi|38158015 mastermind-like 3 [Homo sapiens] 66 1e-10
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 66 2e-10
gi|119943102 CREB binding protein isoform b [Homo sapiens] 65 2e-10
gi|119943104 CREB binding protein isoform a [Homo sapiens] 65 2e-10
gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens] 64 7e-10
gi|32307128 nuclear receptor coactivator 6 [Homo sapiens] 63 1e-09
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 63 2e-09
gi|55750053 atrophin-1 [Homo sapiens] 62 3e-09
gi|55750041 atrophin-1 [Homo sapiens] 62 3e-09
gi|50345997 E1A binding protein p300 [Homo sapiens] 61 4e-09
gi|58530876 melanoma antigen family C, 1 [Homo sapiens] 61 4e-09
gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens] 61 4e-09
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 60 8e-09
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 60 8e-09
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 60 8e-09
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 60 1e-08
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 60 1e-08
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 59 2e-08
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 59 2e-08
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 59 2e-08
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 59 2e-08
gi|151301053 RNA binding motif protein 33 [Homo sapiens] 59 2e-08
>gi|162951884 R3H domain containing 2 [Homo sapiens]
Length = 976
Score = 1958 bits (5072), Expect = 0.0
Identities = 976/976 (100%), Positives = 976/976 (100%)
Query: 1 MSNSNTTQETLEIMKESEKKLVEESVNKNKFISKTPSKEEIEKECEDTSLRQETQRRTSN 60
MSNSNTTQETLEIMKESEKKLVEESVNKNKFISKTPSKEEIEKECEDTSLRQETQRRTSN
Sbjct: 1 MSNSNTTQETLEIMKESEKKLVEESVNKNKFISKTPSKEEIEKECEDTSLRQETQRRTSN 60
Query: 61 HGHARKRAKSNSKLKLVRSLAVCEESSTPFADGPLETQDIIQLHISCPSDKEEEKSTKDV 120
HGHARKRAKSNSKLKLVRSLAVCEESSTPFADGPLETQDIIQLHISCPSDKEEEKSTKDV
Sbjct: 61 HGHARKRAKSNSKLKLVRSLAVCEESSTPFADGPLETQDIIQLHISCPSDKEEEKSTKDV 120
Query: 121 SEKEDKDKNKEKIPRKMLSRDSSQEYTDSTGIDLHEFLVNTLKKNPRDRMMLLKLEQEIL 180
SEKEDKDKNKEKIPRKMLSRDSSQEYTDSTGIDLHEFLVNTLKKNPRDRMMLLKLEQEIL
Sbjct: 121 SEKEDKDKNKEKIPRKMLSRDSSQEYTDSTGIDLHEFLVNTLKKNPRDRMMLLKLEQEIL 180
Query: 181 EFINDNNNQFKKFPQMTSYHRMLLHRVAAYFGMDHNVDQTGKAVIINKTSNTRIPEQRFS 240
EFINDNNNQFKKFPQMTSYHRMLLHRVAAYFGMDHNVDQTGKAVIINKTSNTRIPEQRFS
Sbjct: 181 EFINDNNNQFKKFPQMTSYHRMLLHRVAAYFGMDHNVDQTGKAVIINKTSNTRIPEQRFS 240
Query: 241 EHIKDEKNTEFQQRFILKRDDASMDRDDNQTGQNGYLNDIRLSKEAFSSSSHKRRQIFRG 300
EHIKDEKNTEFQQRFILKRDDASMDRDDNQTGQNGYLNDIRLSKEAFSSSSHKRRQIFRG
Sbjct: 241 EHIKDEKNTEFQQRFILKRDDASMDRDDNQTGQNGYLNDIRLSKEAFSSSSHKRRQIFRG 300
Query: 301 NREGLSRTSSSRQSSTDSELKSLEPRPWSSTDSDGSVRSMRPPVTKASSFSGISILTRGD 360
NREGLSRTSSSRQSSTDSELKSLEPRPWSSTDSDGSVRSMRPPVTKASSFSGISILTRGD
Sbjct: 301 NREGLSRTSSSRQSSTDSELKSLEPRPWSSTDSDGSVRSMRPPVTKASSFSGISILTRGD 360
Query: 361 SIGSSKGGSAGRISRPGMALGAPEVCNQVTSSQSVRGLLPCTAQQQQQQQQQQLPALPPT 420
SIGSSKGGSAGRISRPGMALGAPEVCNQVTSSQSVRGLLPCTAQQQQQQQQQQLPALPPT
Sbjct: 361 SIGSSKGGSAGRISRPGMALGAPEVCNQVTSSQSVRGLLPCTAQQQQQQQQQQLPALPPT 420
Query: 421 PQQQPPLNNHMISQADDLSNPFGQMSLSRQGSTEAADPSAALFQTPLISQHPQQTSFIMA 480
PQQQPPLNNHMISQADDLSNPFGQMSLSRQGSTEAADPSAALFQTPLISQHPQQTSFIMA
Sbjct: 421 PQQQPPLNNHMISQADDLSNPFGQMSLSRQGSTEAADPSAALFQTPLISQHPQQTSFIMA 480
Query: 481 STGQPLPTSNYSTSSHAPPTQQVLPPQGYMQPPQQIQVSYYPPGQYPNSNQQYRPLSHPV 540
STGQPLPTSNYSTSSHAPPTQQVLPPQGYMQPPQQIQVSYYPPGQYPNSNQQYRPLSHPV
Sbjct: 481 STGQPLPTSNYSTSSHAPPTQQVLPPQGYMQPPQQIQVSYYPPGQYPNSNQQYRPLSHPV 540
Query: 541 AYSPQRGQQLPQPSQQPGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSSQRSSMGGQMQGL 600
AYSPQRGQQLPQPSQQPGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSSQRSSMGGQMQGL
Sbjct: 541 AYSPQRGQQLPQPSQQPGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSSQRSSMGGQMQGL 600
Query: 601 VVQYTPLPSYQVPVGSDSQNVVQPPFQQPMLVPVSQSVQGGLPAAGVPVYYSMIPPAQQN 660
VVQYTPLPSYQVPVGSDSQNVVQPPFQQPMLVPVSQSVQGGLPAAGVPVYYSMIPPAQQN
Sbjct: 601 VVQYTPLPSYQVPVGSDSQNVVQPPFQQPMLVPVSQSVQGGLPAAGVPVYYSMIPPAQQN 660
Query: 661 GTSPSVGFLQPPGSEQYQMPQSPSPCSPPQMPQQYSGVSPSGPGVVVMQLNVPNGPQPPQ 720
GTSPSVGFLQPPGSEQYQMPQSPSPCSPPQMPQQYSGVSPSGPGVVVMQLNVPNGPQPPQ
Sbjct: 661 GTSPSVGFLQPPGSEQYQMPQSPSPCSPPQMPQQYSGVSPSGPGVVVMQLNVPNGPQPPQ 720
Query: 721 NPSMVQWSHCKYYSMDQRGQKPGDLYSPDSSPQANTQMSSSPVTSPTQSPAPSPVTSLSS 780
NPSMVQWSHCKYYSMDQRGQKPGDLYSPDSSPQANTQMSSSPVTSPTQSPAPSPVTSLSS
Sbjct: 721 NPSMVQWSHCKYYSMDQRGQKPGDLYSPDSSPQANTQMSSSPVTSPTQSPAPSPVTSLSS 780
Query: 781 VCTGLSPLPVLTQFPRPGGPAQGDGRYSLLGQPLQYNLSICPPLLHGQSTYTVHQGQSGL 840
VCTGLSPLPVLTQFPRPGGPAQGDGRYSLLGQPLQYNLSICPPLLHGQSTYTVHQGQSGL
Sbjct: 781 VCTGLSPLPVLTQFPRPGGPAQGDGRYSLLGQPLQYNLSICPPLLHGQSTYTVHQGQSGL 840
Query: 841 KHGNRGKRQALKSASTDLGTADVVLGRVLEVTDLPEGITRTEADKLFTQLAMSGAKIQWL 900
KHGNRGKRQALKSASTDLGTADVVLGRVLEVTDLPEGITRTEADKLFTQLAMSGAKIQWL
Sbjct: 841 KHGNRGKRQALKSASTDLGTADVVLGRVLEVTDLPEGITRTEADKLFTQLAMSGAKIQWL 900
Query: 901 KDAQGLPGGGGGDNSGTAENGRHSDLAALYTIVAVFPSPLAAQNASLRLNNSVSRFKLRM 960
KDAQGLPGGGGGDNSGTAENGRHSDLAALYTIVAVFPSPLAAQNASLRLNNSVSRFKLRM
Sbjct: 901 KDAQGLPGGGGGDNSGTAENGRHSDLAALYTIVAVFPSPLAAQNASLRLNNSVSRFKLRM 960
Query: 961 AKKNYDLRILERASSQ 976
AKKNYDLRILERASSQ
Sbjct: 961 AKKNYDLRILERASSQ 976
>gi|31543535 R3H domain containing 1 [Homo sapiens]
Length = 1099
Score = 879 bits (2272), Expect = 0.0
Identities = 532/1116 (47%), Positives = 684/1116 (61%), Gaps = 159/1116 (14%)
Query: 1 MSNSNTTQETLEIMKESEKKLVEESVNKNKFISKTPSKEEIEKECEDTSLRQETQRRTSN 60
MS++ T ++ MK+ E ++ + + +N S+ K +EK + QR +
Sbjct: 3 MSDTVTVKDETATMKDLEAEVKDTTRVENLIKSENYGKILVEKNEHCIENNIDLQRPLQS 62
Query: 61 HGHARKRAKSNSKLKLVRSLAVCEESSTPFA-DGPLETQDIIQLHISCPSDKEEEKSTKD 119
G KR+KS+SKLKLVRSLAVCEES P A + E Q+ IQ+ ++ S ++EEK +KD
Sbjct: 63 FGQTGKRSKSSSKLKLVRSLAVCEESPPPPAPEISQENQEKIQIQLT-QSFEKEEKPSKD 121
Query: 120 VSEKEDKDKNKEKIPRKMLSRDSSQEYTDSTGIDLHEFLVNTLKKNPRDRMMLLKLEQEI 179
+EKE K +K+PRKMLSRDSSQEYTDSTGIDLHEFLVNTLK NPRDRMMLLKLEQEI
Sbjct: 122 EAEKE---KASDKLPRKMLSRDSSQEYTDSTGIDLHEFLVNTLKNNPRDRMMLLKLEQEI 178
Query: 180 LEFINDNNNQFKKFPQMTSYHRMLLHRVAAYFGMDHNVDQTGKAVIINKTSNTRIPEQRF 239
L+FI +N + KKFP MTSYHRMLLHRVAAYFG+DHNVDQ+GK+VI+NKTSNTRIP+Q+F
Sbjct: 179 LDFIGNNESPRKKFPPMTSYHRMLLHRVAAYFGLDHNVDQSGKSVIVNKTSNTRIPDQKF 238
Query: 240 SEHIKDEKNTEFQQRFILKRDDASMDRDDNQT---------------------------- 271
+EHIKD+K +FQ+R+ILKRD++S D+DDNQ
Sbjct: 239 NEHIKDDKGEDFQKRYILKRDNSSFDKDDNQMRIRLKDDRRSKSIEEREEEYQRARDRIF 298
Query: 272 ------GQNGYLNDIRLSKEAFSSSSHKRRQIFRGNREGLSRTSSSRQSSTDSELKSLEP 325
Q Y+ D RL E +SS+ +RRQIFR N++ R+++S QSST++ELK EP
Sbjct: 299 SQDSLCSQENYIIDKRLQDED-ASSTQQRRQIFRVNKDASGRSTNSHQSSTENELKYSEP 357
Query: 326 RPWSSTDSDGSVRSMRPPVTKASSFSGISILTRGDSIGSSK----------------GGS 369
RPWSSTDSD S+R+++P VTKASSFSGIS+LTRGDS GSSK G S
Sbjct: 358 RPWSSTDSDSSLRNLKPAVTKASSFSGISVLTRGDSSGSSKSIGRLSKTGSESSGSVGSS 417
Query: 370 AGRISR-----PGMAL-----GAPEVC----------------NQVTSSQSVRGLLPCTA 403
G +S PG AL GAP V QV S + LLP A
Sbjct: 418 TGSLSHIQQPLPGTALSQSSHGAPVVYPTVSTHSSLSFDGGLNGQVASPSTSFFLLPLEA 477
Query: 404 Q------------------------------QQQQQQQQQLPALP----PTPQQQPPLNN 429
QQ + Q+P P P P QQP N
Sbjct: 478 AGIPPGSILINPQTGQPFINPDGSPVVYNPPMTQQPVRSQVPGPPQPPLPAPPQQPAAN- 536
Query: 430 HMISQADDLSNPFGQMSLSRQGSTEAADPSAALFQTPLISQHPQQTSFIMAST------- 482
H+ SQ D+L + F MSL+RQ S + +DP AA+FQ+ ++ Q PQQ+ +IM +
Sbjct: 537 HIFSQ-DNLGSQFSHMSLARQPSADGSDPHAAMFQSTVVLQSPQQSGYIMTAAPPPHPPP 595
Query: 483 -------------GQPLPTSNYSTSSHAPPTQQVLPPQGYMQPPQ-QIQVSYYPPGQYPN 528
GQP+PT+ Y S H P +Q VL QGY+Q P Q+ Y PG Y +
Sbjct: 596 PPPPPPPPPPLPPGQPVPTAGYPASGH-PVSQPVLQQQGYIQQPSPQMPACYCAPGHYHS 654
Query: 529 SNQQYRPLSHPVAYSPQRGQQLPQPSQQPGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSS 588
S QYRP+ V Y+ Q LPQP+QQ G Q ++PNQQQ YQG++GVQQPQ+Q L+S
Sbjct: 655 SQPQYRPVPS-VHYNSHLNQPLPQPAQQTGYQ-VIPNQQQN-YQGIVGVQQPQSQSLVSG 711
Query: 589 QRSSMGGQMQGLVVQYTPLPSYQVPVGSDSQNVVQPPFQQPMLVPVSQSVQGGLPAAGVP 648
Q +S+G Q+QG+V+ YT +P+YQV + SQ + +QQP++ P +QS QG +P G+P
Sbjct: 712 QPNSIGNQIQGVVIPYTSVPTYQVSLPQGSQGIPHQTYQQPVMFP-NQSNQGSMPTTGMP 770
Query: 649 VYYSMIPPAQQNGTSPSVGFLQPPGSEQYQMPQSPSPCSPPQMPQQYSGVSPSGP---GV 705
VYYS+IPP QQN S SVG+LQ PGSEQ Q P++ SPCS Q+ P P G+
Sbjct: 771 VYYSVIPPGQQNNLSSSVGYLQHPGSEQVQFPRTTSPCSSQQLQGHQCTAGPPPPPGGGM 830
Query: 706 VVMQLNVPNGPQPPQNPSMVQWSHCKYYSMDQRGQKPGDLYSPDSSPQANTQMSSSPVTS 765
V+MQL+VPN PQ + S QW KYY QRGQK + S D+ Q + Q+SS P+ S
Sbjct: 831 VMMQLSVPNNPQSCAH-SPPQWKQNKYYCDHQRGQKCVEFSSVDNIVQHSPQLSS-PIIS 888
Query: 766 PTQSPAPSPVTSLSSVCTGLSPLPVLTQFPRPGGPAQGDGRYSLLGQPLQYNLSICPPLL 825
P QSPAP+ +++L +V PL ++ QF RP P QGD RY LLGQPLQYN P +L
Sbjct: 889 PAQSPAPAQLSTLKTVRPSGPPLSIMPQFSRPFVPGQGDSRYPLLGQPLQYNP---PAVL 945
Query: 826 HGQSTYTVHQGQSGLKHGNRGKRQALKSASTDLGTADVVLGRVLEVTDLPEGITRTEADK 885
HG QGQ G +HGNRG+RQA K+ASTDLG + V+G+VLE+T+LP+GITR EA+K
Sbjct: 946 HGHIPN--QQGQPGSRHGNRGRRQAKKAASTDLGAGETVVGKVLEITELPDGITRMEAEK 1003
Query: 886 LFTQLAMSGAKIQWLKDAQGLPGG-----GGGDNSGTAENGRHSDLAALYTIVAVFPSPL 940
LF +L GAKI+WL+D Q P G GDN+ E + SDLA+ YT++A FPS
Sbjct: 1004 LFGELFKIGAKIRWLRDPQSQPRRHPLCCGSGDNTANPERSKPSDLASTYTVLATFPSIS 1063
Query: 941 AAQNASLRLNNSVSRFKLRMAKKNYDLRILERASSQ 976
AAQNA + NSV++FKLR +KK+YD ILERASSQ
Sbjct: 1064 AAQNALKKQINSVNKFKLRTSKKHYDFHILERASSQ 1099
>gi|38261971 cyclic AMP-regulated phosphoprotein, 21 kD isoform 1
[Homo sapiens]
Length = 812
Score = 546 bits (1408), Expect = e-155
Identities = 342/761 (44%), Positives = 450/761 (59%), Gaps = 143/761 (18%)
Query: 35 TPSKEEIEKECEDTSLRQETQRRTSNHGHARKRAKSNS-KLKLVRSLAVCEESSTPFADG 93
TP ++ E D + E QRR R+++KS + K KL RSLAVCEESS
Sbjct: 23 TPENGIVKSESLDEEEKLELQRRLEAQNQERRKSKSGAGKGKLTRSLAVCEESSARPGGE 82
Query: 94 PLETQDIIQLHISCPSD-KEEEKSTKDVSEKE-DKDKNKEKIPRK----MLSRDSSQEYT 147
L+ Q+ I L +S S +EE+KS KD SE+E +KDKNK+K K MLS+D SQEYT
Sbjct: 83 SLQDQESIHLQLSSFSSLQEEDKSRKDDSEREKEKDKNKDKTSEKPKIRMLSKDCSQEYT 142
Query: 148 DSTGIDLHEFLVNTLKKNPRDRMMLLKLEQEILEFINDNNNQFKKFPQMTSYHRMLLHRV 207
DSTGIDLHEFL+NTLK N RDRM+LLK+EQEI++FI DNNN +KKFPQM+SY RML+HRV
Sbjct: 143 DSTGIDLHEFLINTLKNNSRDRMILLKMEQEIIDFIADNNNHYKKFPQMSSYQRMLVHRV 202
Query: 208 AAYFGMDHNVDQTGKAVIINKTSNTRIPEQRFSEHIKDEKNTEFQQRFILKRDDASMDRD 267
AAYFG+DHNVDQTGK+VIINKTS+TRIPEQRF EH+KDEK E Q+RFILKRD++S+D++
Sbjct: 203 AAYFGLDHNVDQTGKSVIINKTSSTRIPEQRFCEHLKDEKGEESQKRFILKRDNSSIDKE 262
Query: 268 DNQTGQNGYLNDIRLSKEA--------------------------------------FSS 289
DNQ + D R SK +
Sbjct: 263 DNQQNRMHPFRDDRRSKSIEEREEEYQRVRERIFAHDSVCSQESLFVENSRLLEDSNICN 322
Query: 290 SSHKRRQIFRGNREGLSRTSSSRQSSTDSELK-SLEPRPWSSTDSDGSVRSMRPPVTKAS 348
++K+RQ+FRGNR+G RTS SRQSS+++ELK S R WSSTDSD S R+++P +TK +
Sbjct: 323 ETYKKRQLFRGNRDGSGRTSGSRQSSSENELKWSDHQRAWSSTDSDSSNRNLKPAMTKTA 382
Query: 349 SFSGISILTRGDSI---------------GSSKGGSAGRISR-----------PGMALGA 382
SF GI++LTRGDS SS GS+G +SR G+A G+
Sbjct: 383 SFGGITVLTRGDSTSSTRSTGKLSKAGSESSSSAGSSGSLSRTHPPLQSTPLVSGVAAGS 442
Query: 383 P--------EVCNQVTSSQSVRGLLPCTAQ------------------------------ 404
P + QV S + LLP A
Sbjct: 443 PGCVPYPENGIGGQVAPSSTSYILLPLEAATGIPPGSILLNPHTGQPFVNPDGTPAIYNP 502
Query: 405 -------------QQQQQQQQQLPALPPTPQQQPP---LNNHMISQADDLSNPFGQMSLS 448
Q QQQ QQ P+ P Q QPP + +++Q DD++ FGQM+LS
Sbjct: 503 PTSQQPLRSAMVGQSQQQPPQQQPSPQPQQQVQPPQPQMAGPLVTQRDDVATQFGQMTLS 562
Query: 449 RQGSTEAAD-PSAALFQTPLISQHPQQTSFIMASTGQPLPTSNYSTSSHAPPTQQVL--- 504
RQ S E + PS ++ + L+ Q QQ S+++ASTGQ LPT +S S P +QQVL
Sbjct: 563 RQSSGETPEPPSGPVYPSSLMPQPAQQPSYVIASTGQQLPTGGFS-GSGPPISQQVLQPP 621
Query: 505 -PPQGYMQ--PPQQIQVSYYPPGQYPNS-NQQYRPLSHPVAYSPQRGQQLPQPSQQPGLQ 560
PQG++Q PP Q+ V YYP GQYP S QQYRP++ PV Y+ QR QQ+PQ +QQ G Q
Sbjct: 622 PSPQGFVQQPPPAQMPVYYYPSGQYPTSTTQQYRPMA-PVQYNAQRSQQMPQAAQQAGYQ 680
Query: 561 PMMPNQQQAAYQGMIGVQQ-PQNQGLLSSQRSSMGGQMQGLVVQYTPLPSYQVPVGSDSQ 619
P++ QQ +QG+IGVQQ PQ+Q ++++Q+ G +Q ++V Y + SYQVP+ SQ
Sbjct: 681 PVLSGQQ--GFQGLIGVQQPPQSQNVINNQQ---GTPVQSVMVSYPTMSSYQVPMTQGSQ 735
Query: 620 NVVQPPFQQPMLVPVSQSVQGGLPAAGVPVYYSMIPPAQQN 660
+ Q +QQP+++P +Q+ QG LPA G+PVY ++ PP QN
Sbjct: 736 GLPQQSYQQPIMLP-NQAGQGSLPATGMPVYCNVTPPTPQN 775
>gi|171460948 TSC22 domain family, member 1 isoform 1 [Homo sapiens]
Length = 1073
Score = 74.3 bits (181), Expect = 5e-13
Identities = 114/439 (25%), Positives = 159/439 (36%), Gaps = 34/439 (7%)
Query: 358 RGDSIGSSKGGSAGRISRPGMALGAPEVCNQVTSSQSVRGLLPCTAQQQQQQQQQQLPAL 417
R + GSS S +S ++G+ E+ Q QQQQQQQQQQ PAL
Sbjct: 462 RESTSGSSVSSSVSTLSHYTESVGSGEMGAPTVVVQQ---------QQQQQQQQQQQPAL 512
Query: 418 PPTPQQQPPLNNHMISQADDLSNPFGQMSLSRQGSTEAADPSAALFQTPLISQHPQQTSF 477
QQ + +S P +S S+ + + Q + P Q +
Sbjct: 513 QGVTLQQMDFGSTGPQSIPAVSIP-QSISQSQISQVQLQSQELSYQQKQGLQPVPLQATM 571
Query: 478 IMASTGQPLPTSNYSTSS---HAPPTQQVLPPQ-GYMQ--PPQQIQVSYYPPGQYPNSNQ 531
A+ QP P + +S P + PQ Y Q PP Q + PP Q Q
Sbjct: 572 SAATGIQPSPVNVVGVTSALGQQPSISSLAQPQLPYSQAAPPVQTPLPGAPPPQQLQYGQ 631
Query: 532 QYRPLSHPVA----YSPQRGQQLPQPSQQPGLQPMMPNQQQA-----AYQGMIGVQQPQN 582
Q +S +A S + QQP LQ M + Q + A +I V QPQ
Sbjct: 632 QQPMVSTQMAPGHVKSVTQNPASEYVQQQPILQTAMSSGQPSSAGVGAGTTVIPVAQPQG 691
Query: 583 QGLLSSQRSSMGGQMQGLVVQ---YTPLPSYQVPVGSDSQNVVQPPFQQPMLVPVSQSVQ 639
L Q +++ Q G VQ P VP GS N+ Q + S V
Sbjct: 692 I-QLPVQPTAVPAQPAGASVQPVGQAPAAVSAVPTGSQIANIGQQANIPTAVQQPSTQVP 750
Query: 640 GGLPAAGVPVYYSMIPPAQQNGTSPSVGFLQPPGSEQYQMPQSPSPCSPPQMPQQYSGVS 699
+ G P ++PPAQ V P +Q + S + P PQ GV
Sbjct: 751 PSVIQQGAPPSSQVVPPAQTGIIHQGVQTSAPSLPQQLVIASQSSLLTVPPQPQ---GVE 807
Query: 700 PSGPGVVVMQLNVPNGPQPPQNPSMVQWSHCKYYSMDQRGQKPGDLYSPDSSPQANTQMS 759
P G+V QL P P S+ S P +L P + Q +
Sbjct: 808 PVAQGIVSQQL--PAVSSLPSASSISVTSQVSSTGPSGMPSAPTNLVPPQNIAQTPATQN 865
Query: 760 SSPVTSPTQSPAPSPVTSL 778
+ V S +Q P + T+L
Sbjct: 866 GNLVQSVSQPPLIATNTNL 884
Score = 35.4 bits (80), Expect = 0.26
Identities = 56/213 (26%), Positives = 78/213 (36%), Gaps = 43/213 (20%)
Query: 577 VQQPQNQGLLSSQRSSMGGQMQGLVVQYTPLPS---YQVPVGSDSQNVVQPPFQQPMLVP 633
VQQ Q Q Q+ +QG+ +Q S +P S Q++ Q Q L
Sbjct: 496 VQQQQQQ----QQQQQQQPALQGVTLQQMDFGSTGPQSIPAVSIPQSISQSQISQVQLQS 551
Query: 634 VSQSVQGGLPAAGVPVYYSMIPPAQQNGTSPSVGFLQPPGSEQYQMPQSPSPCSPPQMPQ 693
S Q VP+ +M + G PS + S Q P S S + PQ+P
Sbjct: 552 QELSYQQKQGLQPVPLQATM---SAATGIQPSPVNVVGVTSALGQQP-SISSLAQPQLP- 606
Query: 694 QYSGVSPSGPGVVVMQLNVPNGPQPPQNPSMVQWSHCKYYSMDQRGQKPGDLYSPDSSPQ 753
YS +P +Q +P P P Q Q GQ+ P
Sbjct: 607 -YSQAAPP------VQTPLPGAPPPQQL---------------QYGQQ---------QPM 635
Query: 754 ANTQMSSSPVTSPTQSPAPSPVTSLSSVCTGLS 786
+TQM+ V S TQ+PA V + T +S
Sbjct: 636 VSTQMAPGHVKSVTQNPASEYVQQQPILQTAMS 668
>gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens]
Length = 788
Score = 73.2 bits (178), Expect = 1e-12
Identities = 129/478 (26%), Positives = 163/478 (34%), Gaps = 89/478 (18%)
Query: 347 ASSFSGISILTRGDSIGSSKGGSAGRISRP------------GMALGAPEVCNQVTSSQS 394
A+ +GI + RG GS G + +P GMA + V + T
Sbjct: 93 AAGAAGIGMPPRGPGQSLGGMGSLGAMGQPMSLSGQPPPGTSGMAPHSMAVVSTATPQTQ 152
Query: 395 VRGLLPCTAQQQQQQ--QQQQLPALPPTPQQQPPLNNHMISQADDLSNPFGQMSLSRQGS 452
++ QQQQQQ QQQQ AL QQQ Q Q S
Sbjct: 153 LQLQQVALQQQQQQQQFQQQQQAALQQQQQQQQ------------------QQQFQAQQS 194
Query: 453 TEAADPSAALFQTPLISQHPQQTSFIMASTGQPLPTSNYSTSSHAPPTQQVLPPQGYMQP 512
A + Q + Q QQ Q L ++ QQ L +Q
Sbjct: 195 AMQQQFQAVVQQQQQLQQQQQQQ--------QHLIKLHHQNQQQIQQQQQQLQRIAQLQL 246
Query: 513 PQQIQVSYYPPGQYPNSNQQYRPLSHPVAYSPQ--RGQQLPQPSQQ----PGLQPMMPNQ 566
QQ Q Q + Q P+ P PQ Q LPQ QQ QP Q
Sbjct: 247 QQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPPSQALPQQLQQMHHTQHHQPPPQPQ 306
Query: 567 QQAAYQGMIGVQQPQNQGL-LSSQRSSMGGQMQGLVVQYTPLPSYQVPVGSDSQNVVQPP 625
Q Q PQ+Q L SQ ++ GQM + PL + P+ VVQ P
Sbjct: 307 QPPVAQNQPSQLPPQSQTQPLVSQAQALPGQM---LYTQPPLKFVRAPM------VVQQP 357
Query: 626 FQQPMLVPVSQSVQGGLPAAGVPVYYSMIPPA-QQNGTSPSVGFLQPPGSEQYQMPQSPS 684
QP + +VQ A V MI A Q G F PP + +P S
Sbjct: 358 PVQPQVQQQQTAVQTAQAAQMVAPGVQMITEALAQGGMHIRARF--PPTTAVSAIPSSSI 415
Query: 685 PCSPPQMPQQYSG----VSPSGPGVVVMQLNVPNGPQPPQNPSMVQWSHCKYYSMDQRGQ 740
P M Q +S PG Q+ P PP PS
Sbjct: 416 PLGRQPMAQVSQSSLPMLSSPSPG---QQVQTPQSMPPPPQPS----------------P 456
Query: 741 KPGDLYSPDSSPQANTQMSSSPVTSPTQ-SPAPSPVTSLSSVCTGLSPLPVLTQFPRP 797
+PG P S P N+ +SS P SP+ P+PSP S S V T +P P P
Sbjct: 457 QPG---QPSSQP--NSNVSSGPAPSPSSFLPSPSPQPSQSPV-TARTPQNFSVPSPGP 508
Score = 60.5 bits (145), Expect = 8e-09
Identities = 97/380 (25%), Positives = 129/380 (33%), Gaps = 100/380 (26%)
Query: 393 QSVRGLLPCTAQQQQQQQQQQLPALPPTPQQQPPLNNHMISQADDLSNPFGQMSLSRQGS 452
Q ++ + QQQQQQQQQQ Q QPP+ + Q
Sbjct: 236 QQLQRIAQLQLQQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQ---------------- 279
Query: 453 TEAADPSAALFQTPLISQHPQQTSFIMASTGQPLPTSNYSTSSHAPPTQQVLPPQGYMQP 512
PS AL PQQ + T H PP Q PP QP
Sbjct: 280 ---PPPSQAL---------PQQLQ------------QMHHTQHHQPPPQPQQPPVAQNQP 315
Query: 513 PQQIQVSYYPPGQYPNSNQQYRPLSHPVAYS--PQRGQQLPQPSQQPGLQPMMPNQQQAA 570
Q P Q Q + L + Y+ P + + P QQP +QP + QQQ A
Sbjct: 316 SQ-----LPPQSQTQPLVSQAQALPGQMLYTQPPLKFVRAPMVVQQPPVQPQV-QQQQTA 369
Query: 571 YQGMIGVQQPQNQGLLSSQRSSMGGQMQGLVVQYTP------LPSYQVPVGSDSQNVVQP 624
Q Q + ++ + GG + ++ P +PS +P+G
Sbjct: 370 VQTAQAAQMVAPGVQMITEALAQGG--MHIRARFPPTTAVSAIPSSSIPLGRQ------- 420
Query: 625 PFQQPMLVPVSQSVQGGLPAAGVPVYYSMIPPAQQNGTSPSVGFLQPPGSEQYQMPQSPS 684
P++Q Q LP P P QQ +Q P S MP P
Sbjct: 421 --------PMAQVSQSSLPMLSSP------SPGQQ---------VQTPQS----MPPPPQ 453
Query: 685 PCSPPQMP--QQYSGVSPSGPGVVVMQLNVPNGPQPPQNPSMVQWSHCKYYSMDQRGQ-- 740
P P P Q S VS SGP PQP Q+P + + +S+ G
Sbjct: 454 PSPQPGQPSSQPNSNVS-SGPAPSPSSFLPSPSPQPSQSPVTARTP--QNFSVPSPGPLN 510
Query: 741 ---KPGDLYSPDSSPQANTQ 757
P + SP S QA Q
Sbjct: 511 TPVNPSSVMSPAGSSQAEEQ 530
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 72.8 bits (177), Expect = 1e-12
Identities = 106/437 (24%), Positives = 156/437 (35%), Gaps = 59/437 (13%)
Query: 376 PGMALGAPEVCNQVTSSQSVRGLLPCTAQQQQQQQQQQLPALPPTPQQ----QPPLNNHM 431
P ++ P Q + Q + P A Q Q P L +P++ QPP
Sbjct: 629 PAVSTPLPLGLQQPQAQQPPQAPTPQAAAPPQATTPQPSPGLASSPEKIVLGQPPSATPT 688
Query: 432 ISQADDLSNPF-----GQMSLSRQGSTEAADPSAALFQTPLISQHPQQTSFIMASTGQPL 486
D F Q LS +G + P++ + P +Q P + + G
Sbjct: 689 AILTQDSLQMFLPQERSQQPLSAEGP-HLSVPASVIVSAPPPAQDPAPATPVAKGAGLG- 746
Query: 487 PTSNYSTSSHAPPTQQVLPPQGYMQPPQQIQVSYYPPGQYPNSNQQYRPLSHPV---AYS 543
P + S +S AP Q +P ++ P S P Q P + + P HP +
Sbjct: 747 PQAPDSQASPAPAPQ--IPAAAPLKGPGPSS-SPSLPHQAPLGDSPHLPSPHPTRPPSRP 803
Query: 544 PQRGQQLPQPSQQPGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSSQRSSMGGQMQGLVVQ 603
P R Q + +P +P L P P Q G+ +Q NQ + S+ G
Sbjct: 804 PSRPQSVSRPPSEPPLHPCPPPQAPPTLPGIFVIQ---NQLGVPPPASNPAPTAPG--PP 858
Query: 604 YTPL-PSYQVPVGSDSQNVVQPPFQQPMLVPVSQSVQGGLPAAGVPVYYSMIPPAQQNGT 662
PL P Q P G PP V S LPA + PP+Q
Sbjct: 859 QPPLRPQSQPPEGPLPPAPHLPPSSTSSAVASSSETSSRLPAPTPSDFQLQFPPSQGPHK 918
Query: 663 SPSV----------GFLQPPGSEQYQMPQSPSPCSP-PQMPQQYSGVSPSGPGVVVMQLN 711
SP+ PP +QM +P P P P+ + PSG +++Q
Sbjct: 919 SPTPPPTLHLVPEPAAPPPPPPRTFQMVTTPFPALPQPKALLERFHQVPSG---IILQNK 975
Query: 712 VPNGPQPPQNPSMVQWSHCKYYSMDQRGQKPGDLYSPDSSPQANTQMSSSPVTSPTQSPA 771
P PQ + + G L SP +S + Q S T+P+ +PA
Sbjct: 976 AGGAPAAPQTSTSL-----------------GPLTSPAASVLVSGQAPSGTPTAPSHAPA 1018
Query: 772 PSPVTSLSSVCTGLSPL 788
P+P+ + TGL PL
Sbjct: 1019 PAPMAA-----TGLPPL 1030
Score = 61.2 bits (147), Expect = 4e-09
Identities = 122/479 (25%), Positives = 159/479 (33%), Gaps = 85/479 (17%)
Query: 480 ASTGQPLPTSNYSTSSHAPPTQQVLPPQGYMQPPQQIQVSYYPPGQYPNSNQQYRPLSHP 539
A+TG+ P + APP P G QP Q Q P Q Q P P
Sbjct: 610 AATGEAAPVLTVQPAPQAPPAVSTPLPLGLQQPQAQ-QPPQAPTPQAAAPPQATTPQPSP 668
Query: 540 -VAYSPQRGQQLPQPSQQP-------GLQPMMPNQQQAAYQGMIGVQQPQNQGLLSSQRS 591
+A SP++ PS P LQ +P ++ QQP LS++
Sbjct: 669 GLASSPEKIVLGQPPSATPTAILTQDSLQMFLPQERS---------QQP-----LSAEGP 714
Query: 592 SMGGQMQGLVVQYTPL--PSYQVPVGSDSQNVVQPPFQQPMLVPVSQSVQGGLPAAGV-P 648
+ +V P P+ PV + Q P Q P Q + P G P
Sbjct: 715 HLSVPASVIVSAPPPAQDPAPATPVAKGAGLGPQAPDSQASPAPAPQ-IPAAAPLKGPGP 773
Query: 649 VYYSMIPPAQQNGTSPSVGFLQP--PGSEQYQMPQSPS---------PCSPPQMPQQYSG 697
+P G SP + P P S PQS S PC PPQ P
Sbjct: 774 SSSPSLPHQAPLGDSPHLPSPHPTRPPSRPPSRPQSVSRPPSEPPLHPCPPPQAP----- 828
Query: 698 VSPSGPGVVVMQLNV----------PNGPQPPQNPSMVQWSHCKYYSMDQRGQKPGDLYS 747
P+ PG+ V+Q + P P PPQ P Q S G P +
Sbjct: 829 --PTLPGIFVIQNQLGVPPPASNPAPTAPGPPQPPLRPQ-------SQPPEGPLPPAPHL 879
Query: 748 PDSSPQ---ANTQMSSSPVTSPTQSPAPSPVTSLSSVCTGLSPLPVLTQFPRPGGPAQGD 804
P SS A++ +SS + +PT S +P P L P P P
Sbjct: 880 PPSSTSSAVASSSETSSRLPAPTPSDFQLQFPPSQGPHKSPTPPPTLHLVPEPAAPPPPP 939
Query: 805 GR-YSLLGQPLQYNLSICPPLLHGQSTY-TVHQGQSGLKHGNR-GKRQALKSASTDLGTA 861
R + ++ P P L ++ HQ SG+ N+ G A ST LG
Sbjct: 940 PRTFQMVTTPF-------PALPQPKALLERFHQVPSGIILQNKAGGAPAAPQTSTSLGPL 992
Query: 862 DVVLGRVLEVTDLPEGITRTEADKLFTQLAMSGAKIQWLKDAQGLPGGGGGDNSGTAEN 920
VL P G T A S A A GLP +N A N
Sbjct: 993 TSPAASVLVSGQAPSG----------TPTAPSHAPAPAPMAATGLPPLLPAENKAFASN 1041
Score = 55.1 bits (131), Expect = 3e-07
Identities = 78/332 (23%), Positives = 124/332 (37%), Gaps = 50/332 (15%)
Query: 484 QPLPTSNYSTSSHAPPTQQVLPPQGYMQPPQQIQVSYYPPGQYPNSNQQYRP--LSHPVA 541
QP N + + Q V+ G+ P Q V PP + P LS P++
Sbjct: 390 QPKAPQNLTFMAAGKAGQNVVL-SGFPAPALQANVFKQPPATTTGAAPPQPPGALSKPMS 448
Query: 542 -YSPQRGQQLPQPSQQPGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSSQRSSMGGQMQGL 600
+ +G + P+Q M+P Q Q G VQ PQ LS+ +++GGQ+
Sbjct: 449 VHLLNQGSSIVIPAQH-----MLPGQNQFLLPGAPAVQLPQQ---LSALPANVGGQILAA 500
Query: 601 VVQYTPLPSYQVPVGSDSQNVVQPPFQQPMLVPVSQSVQGGLPAA-----GVPVYYSMIP 655
+T P+ ++ QN+ P P+L P S + + +A G P + M P
Sbjct: 501 AAPHTGGQLIANPILTN-QNLAGPLSLGPVLAPHSGAHSAHILSAAPIQVGQPALFQM-P 558
Query: 656 PAQQNGTSPSVGFLQPPGSEQYQMPQSPSPCSPPQMPQQYSGVSPSGPGVVVMQLNVPNG 715
+ G+ P+ P+P P P P V M LN P+G
Sbjct: 559 VSLAAGSLPT--------------QSQPAPAGPAATTVLQGVTLP--PSAVAM-LNTPDG 601
Query: 716 PQPPQNPSMVQWSHCKYYSMDQRGQKPGDLYSP----------DSSPQANTQMSSSPVTS 765
P P+ ++ Q P + +P PQA T +++P +
Sbjct: 602 LVQPATPAAATGEAAPVLTVQPAPQAPPAVSTPLPLGLQQPQAQQPPQAPTPQAAAPPQA 661
Query: 766 PTQSPAPSPVTSLSSVCTG----LSPLPVLTQ 793
T P+P +S + G +P +LTQ
Sbjct: 662 TTPQPSPGLASSPEKIVLGQPPSATPTAILTQ 693
>gi|21312134 mediator complex subunit 15 isoform b [Homo sapiens]
Length = 748
Score = 71.6 bits (174), Expect = 3e-12
Identities = 123/444 (27%), Positives = 157/444 (35%), Gaps = 79/444 (17%)
Query: 347 ASSFSGISILTRGDSIGSSKGGSAGRISRP------------GMALGAPEVCNQVTSSQS 394
A+ +GI + RG GS G + +P GMA + V + T
Sbjct: 93 AAGAAGIGMPPRGPGQSLGGMGSLGAMGQPMSLSGQPPPGTSGMAPHSMAVVSTATPQTQ 152
Query: 395 VRGLLPCTAQQQQQQ--QQQQLPALPPTPQQQPPLNNHMISQADDLSNPFGQMSLSRQGS 452
++ QQQQQQ QQQQ AL QQQ Q Q S
Sbjct: 153 LQLQQVALQQQQQQQQFQQQQQAALQQQQQQQQ------------------QQQFQAQQS 194
Query: 453 TEAADPSAALFQTPLISQHPQQTSFIMASTGQPLPTSNYSTSSHAPPTQQVLPPQGYMQP 512
A + Q + Q QQ Q L ++ QQ L +Q
Sbjct: 195 AMQQQFQAVVQQQQQLQQQQQQQ--------QHLIKLHHQNQQQIQQQQQQLQRIAQLQL 246
Query: 513 PQQIQVSYYPPGQYPNSNQQYRPLSHPVAYSPQ--RGQQLPQPSQQ----PGLQPMMPNQ 566
QQ Q Q + Q P+ P PQ Q LPQ QQ QP Q
Sbjct: 247 QQQQQQQQQQQQQQQQALQAQPPIQQPPMQQPQPPPSQALPQQLQQMHHTQHHQPPPQPQ 306
Query: 567 QQAAYQGMIGVQQPQNQGL-LSSQRSSMGGQMQGLVVQYTPLPSYQVPVGSDSQNVVQPP 625
Q Q PQ+Q L SQ ++ GQM + PL + P+ VVQ P
Sbjct: 307 QPPVAQNQPSQLPPQSQTQPLVSQAQALPGQM---LYTQPPLKFVRAPM------VVQQP 357
Query: 626 FQQPMLVPVSQSVQ----GGLPAAGVPVYYSMIPPAQQNGTSPSVG-FLQPPGSEQYQMP 680
QP + +VQ + A GV V S +P +SPS G +Q P S MP
Sbjct: 358 PVQPQVQQQQTAVQTAQAAQMVAPGVQVSQSSLPML----SSPSPGQQVQTPQS----MP 409
Query: 681 QSPSPCSPPQMP--QQYSGVSPSGPGVVVMQLNVPNGPQPPQNPSMVQWSHCKYYSMDQR 738
P P P P Q S VS SGP PQP Q+P + + +S+
Sbjct: 410 PPPQPSPQPGQPSSQPNSNVS-SGPAPSPSSFLPSPSPQPSQSPVTARTP--QNFSVPSP 466
Query: 739 GQ-----KPGDLYSPDSSPQANTQ 757
G P + SP S QA Q
Sbjct: 467 GPLNTPVNPSSVMSPAGSSQAEEQ 490
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 66.6 bits (161), Expect = 1e-10
Identities = 133/510 (26%), Positives = 169/510 (33%), Gaps = 97/510 (19%)
Query: 311 SRQSSTDSELKSLEPRPWSSTDSDGSVRSMRPPVTKASSFSGISILTRGDSIGSSKGGSA 370
SR + T+ L PRP S R V+ AS S T + +
Sbjct: 180 SRAAGTEVGL----PRPAPSARPRPPTEGPRKSVSSASEHS----TTEPSPAARRRPSAG 231
Query: 371 GRISRPG---MALGAPEVCNQVTSSQSVRGLLPCTAQQQQQQQQQQLPALPPTPQQQPPL 427
G + RP ++ A + + S S RG P Q + + L AL P PQ PP
Sbjct: 232 GGLQRPASRSLSSSATPLSSPARSGPSARGT-PRAPAHPSQPKPKGLQALRP-PQVTPPR 289
Query: 428 NNHMISQADDLSNPFGQMSLSRQGSTEAADPSAAL-FQTPLISQHPQQTSFIMASTGQPL 486
D + G +S S + PSAAL Q P +S + PL
Sbjct: 290 K--------DAAPALGPLSSSPLATPS---PSAALQSQAPPTLPATPHSSSLTCQLATPL 338
Query: 487 PTSNYSTSSHAPPTQQVLPPQGYMQPPQQIQVSYYPPGQYPNSNQQYRPLSHPVAYSPQR 546
P + S S APP+ Q LP P Q P Q +S PLS PQ
Sbjct: 339 PLAPPSPS--APPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQA 396
Query: 547 GQQLPQPS-QQPGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSSQRSSMGGQMQGLVVQYT 605
L P Q P P P A
Sbjct: 397 PPALALPPLQAPPSPPASPPLSPLA----------------------------------- 421
Query: 606 PLPSYQVPVGSDSQNVVQPPFQQPMLVPVSQSVQGGLPAAGVPVYYSMIPPAQQNGTSPS 665
PS Q P + + +++Q PF P PV P A PV S PP+Q PS
Sbjct: 422 -TPSPQAP-NALAVHLLQAPFSPPPSPPVQAPFS---PPASPPVSPSATPPSQ---APPS 473
Query: 666 VGF--LQPPGSEQYQMPQSPSPCSPPQMPQ-------QYSGVSPSGPGVVVMQLNVPNGP 716
+ LQ P S P SPS PPQ P Q + P P + + P
Sbjct: 474 LAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATP-PLQALP 532
Query: 717 QPPQN-PSMVQWSHCKYYSMDQRGQKPGDLYSPDSSPQANTQMSSSPVTSPT-----QSP 770
PP + P +S M P +P Q+ SP SPT + P
Sbjct: 533 SPPASFPGQAPFSPSASLPMSPLATPPPQ--APPVLAAPLLQVPPSPPASPTLQAPRRPP 590
Query: 771 APSPVTSLSSVCTGLSPLPVLTQFPRPGGP 800
P P TS+S P LT PG P
Sbjct: 591 TPGPDTSVSG--------PRLTLALAPGPP 612
Score = 48.9 bits (115), Expect = 2e-05
Identities = 116/504 (23%), Positives = 160/504 (31%), Gaps = 100/504 (19%)
Query: 358 RGDSIGSSKGGSAGRISRPGMALG------------------------APEVCNQVTSSQ 393
RG+ +K S G +S PG A G A E + S
Sbjct: 99 RGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSA 158
Query: 394 SVR----GLLPCTAQQQQQQQQQQ------LPALPPTPQQQPPLN--NHMISQADDLSNP 441
R G P T ++ + LP P+ + +PP +S A + S
Sbjct: 159 GARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTT 218
Query: 442 FGQMSLSRQ-----GSTEAADPSAALFQTPLIS-----QHPQQTSFIMASTGQPLPTSNY 491
+ R+ G A S + TPL S + T A QP P
Sbjct: 219 EPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQ 278
Query: 492 S--TSSHAPPTQQVLPPQGYMQ-------PPQQIQVSYYPP--GQYPNSNQQYRPLSHPV 540
+ PP + P G + P S PP P+S+ L+ P+
Sbjct: 279 ALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPL 338
Query: 541 AYSPQRGQQLPQPSQQPGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSSQRSSMGGQMQGL 600
+P P PS P LQ + Q + P Q S S
Sbjct: 339 PLAP------PSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPS--------- 383
Query: 601 VVQYTPLPSYQVPVGSDSQNVVQPPFQQPMLVPVSQSVQGGLPAAGVPVYYSMIPPAQQN 660
PL P + PP Q P P S P + P+ Q
Sbjct: 384 ----PPLSPLATPPPQAPPALALPPLQAPPSPPAS------------PPLSPLATPSPQA 427
Query: 661 GTSPSVGFLQ----PPGSEQYQMPQSPSPCSPPQMPQQYSGVSPSGPGVVVMQLNVPNGP 716
+ +V LQ PP S Q P SP P SPP P + S + P + L VP P
Sbjct: 428 PNALAVHLLQAPFSPPPSPPVQAPFSP-PASPPVSPSA-TPPSQAPPSLAAPPLQVP--P 483
Query: 717 QPPQNPSMVQWSHCKYYSMDQRGQKPGDLYSPDSSPQANTQMSSSPVTSPTQSPAPSPVT 776
PP +P M + + P L P PQA +++ P+ + PA P
Sbjct: 484 SPPASPPMSPSATPPPQAPPPLAAPPLQLAKP--PPQAPPALATPPLQALPSPPASFPGQ 541
Query: 777 SLSSVCTGLSPLPVLTQFPRPGGP 800
+ S L P+ T P P P
Sbjct: 542 APFSPSASLPMSPLAT--PPPQAP 563
>gi|38158015 mastermind-like 3 [Homo sapiens]
Length = 1133
Score = 66.2 bits (160), Expect = 1e-10
Identities = 120/503 (23%), Positives = 185/503 (36%), Gaps = 80/503 (15%)
Query: 367 GGSAGRISRPGMALGAPEVCNQVTSSQSVRGLLPCTAQQQQQQQQQQLPALPPTPQQQPP 426
G ++G ++ P + E Q+ + Q R L QQQQQQQQQQ QQQ
Sbjct: 449 GSASGPVAVPSSDMSPAEQLKQMAAQQQQRAKLMQQKQQQQQQQQQQQQQQQQQQQQQHS 508
Query: 427 LNNHMISQADDLSNPFGQMSLSRQGSTEAADPSAALFQTPLISQHPQQTSFIMASTGQPL 486
S S+P+G + + ++ P A Q P++ MA+ Q
Sbjct: 509 NQTSNWSPLGPPSSPYGAAFTAEKPNSPMMYPQAFNNQNPIVPP--------MANNLQKT 560
Query: 487 PTSNYSTSSHAPPTQQVLPPQGYMQPPQQIQVSYYPPGQYPNSNQQYRPLSHPVAYSPQR 546
+NY +H Q G +Q + Y +PL+H ++
Sbjct: 561 TMNNYLPQNHMNMINQQPNNLGTNSLNKQHNILTYG---------NTKPLTH---FNADL 608
Query: 547 GQQLPQPSQQPGLQPMMPNQQQAAYQGMIGVQQPQNQG------------LLSSQRSSMG 594
Q++ P P P+MP QQ Q QQ Q Q L Q+ +
Sbjct: 609 SQRMTPPVANPNKNPLMPYIQQQQQQQQQQQQQQQQQQPPPPQLQAPRAHLSEDQKRLLL 668
Query: 595 GQMQGLVVQ---YTPLPSY---QVPVG-----SDSQNVVQPPFQQPMLV---PVSQSVQG 640
+ +G++ Q Y LPS+ Q PVG Q+ V PP M+ P G
Sbjct: 669 MKQKGVMNQPMAYAALPSHGQEQHPVGLPRTTGPMQSSV-PPGSGGMVSGASPAGPGFLG 727
Query: 641 GLPAAGVPVYYSMIPPAQQNGTSPSVGFLQPPGSEQYQMPQ--SPSPCSPPQMPQQYSGV 698
P A + + +I Q FL+ +Q Q Q + +P+Q+ +
Sbjct: 728 SQPQAAI-MKQMLIDQRAQLIEQQKQQFLREQRQQQQQQQQILAEQQLQQSHLPRQH--L 784
Query: 699 SPSGPGVVVMQLNVPNGPQPPQNPSMVQWSHCKYYSMDQR--------------GQKPGD 744
P V Q+N G PQ+ + V+ S SM Q PG
Sbjct: 785 QPQRNPYPVQQVNQFQGS--PQDIAAVR-SQAALQSMRTSRLMAQNAGMMGIGPSQNPGT 841
Query: 745 LYSPDSSPQANTQMSSSPV-TSPTQSPAPSPV-TSLSSVC-----TGLSPLPVLTQFPRP 797
+ ++ A ++M +P T+PT P + T ++ + +G+S Q PR
Sbjct: 842 M----ATAAAQSEMGLAPYSTTPTSQPGMYNMSTGMTQMLQHPNQSGMSITHNQAQGPRQ 897
Query: 798 GGPAQGDGRYSLLGQPLQYNLSI 820
QG G S GQ + N +I
Sbjct: 898 PASGQGVGMVSGFGQSMLVNSAI 920
Score = 50.1 bits (118), Expect = 1e-05
Identities = 104/445 (23%), Positives = 155/445 (34%), Gaps = 70/445 (15%)
Query: 404 QQQQQQQQQQLPALPPTPQQQPPLNNHMISQADDLSNPFGQMSLSRQGSTEAADPSAALF 463
QQQQQQQQQQ PP PQ Q P + +S+ Q + Q AA PS
Sbjct: 633 QQQQQQQQQQQQQQPPPPQLQAPRAH--LSEDQKRLLLMKQKGVMNQPMAYAALPSHGQE 690
Query: 464 QTPL---ISQHPQQTSFI-----MASTGQPLPTSNYSTSSHAPPTQQVLPPQGYMQPPQQ 515
Q P+ + P Q+S M S P + A +Q+L Q QQ
Sbjct: 691 QHPVGLPRTTGPMQSSVPPGSGGMVSGASPAGPGFLGSQPQAAIMKQMLIDQRAQLIEQQ 750
Query: 516 IQVSYYPPGQYPNSNQQ----------YRPLSHPVAYSPQRG--------------QQLP 551
Q Q QQ + P H PQR Q +
Sbjct: 751 KQQFLREQRQQQQQQQQILAEQQLQQSHLPRQH---LQPQRNPYPVQQVNQFQGSPQDIA 807
Query: 552 QPSQQPGLQPMMPNQQQAAYQGMIGVQQPQNQGLL--SSQRSSMGGQMQGLVVQYTPLPS 609
Q LQ M ++ A GM+G+ QN G + ++ +S MG + Y+ P+
Sbjct: 808 AVRSQAALQSMRTSRLMAQNAGMMGIGPSQNPGTMATAAAQSEMG------LAPYSTTPT 861
Query: 610 YQ---VPVGSDSQNVVQPPFQQPMLVPVSQSVQGGLPAAGVPVYYSMIPPAQQNGTSPSV 666
Q + + ++Q P Q M + +Q+ PA+G V M+ Q+ S
Sbjct: 862 SQPGMYNMSTGMTQMLQHPNQSGMSITHNQAQGPRQPASGQGV--GMVSGFGQSMLVNSA 919
Query: 667 GFLQPPGSEQYQMPQSPSPCSPPQMPQQYSGVSPSG------------PGVVVMQL---- 710
Q P + P P +PP++ Q G G PG +L
Sbjct: 920 ITQQHPQMKGPVGQALPRPQAPPRL-QSLMGTVQQGAQSWQQRSLQGMPGRTSGELGPFN 978
Query: 711 NVPNGPQPPQNPSMVQWSHCKYYSMDQRGQKPGDLYSPDSSPQANTQMSSSPVTSPTQSP 770
N + P P + + + S G + + + + M S P T
Sbjct: 979 NGASYPLQAGQPRLTKQHFPQGLSQSVVDANTGTVRTLNPAAMGRQMMPSLPGQQGTSQA 1038
Query: 771 APSPVTSLSSVCTGLSPLPVLTQFP 795
P ++ LS G+ +P +Q P
Sbjct: 1039 RPMVMSGLSQ---GVPGMPAFSQPP 1060
Score = 41.2 bits (95), Expect = 0.005
Identities = 52/217 (23%), Positives = 79/217 (36%), Gaps = 20/217 (9%)
Query: 421 PQQQPPLNNHMISQADDLSN-PFGQMSL-SRQGSTEAADPSAALFQT----PLISQHPQQ 474
P + PL+ S D S+ PF +S+ S Q ++ P + T P ++ P
Sbjct: 344 PATETPLSQESASVKSDPSHSPFAHVSMGSPQARPSSSGPPFSTVSTATSLPSVASTPAA 403
Query: 475 TSFIMASTGQPLPTSNYSTSSHAPPTQQVLPPQGYMQPPQQIQV--SYYPPGQYPNSNQQ 532
+ + + + +H P P GY+ P + V S P P+S+
Sbjct: 404 PNPASSPANCAVQSPQTPNQAHTPGQAPPRPGNGYLLNPAAVTVAGSASGPVAVPSSDMS 463
Query: 533 -YRPLSHPVAYSPQRGQQLPQPSQQPGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSSQRS 591
L A QR + + Q QQ Q QQQ Q QQ NQ +S S
Sbjct: 464 PAEQLKQMAAQQQQRAKLMQQKQQQQQQQQQQQQQQQQQQQ-----QQHSNQ---TSNWS 515
Query: 592 SMGGQMQGLVVQYT---PLPSYQVPVGSDSQNVVQPP 625
+G +T P P ++QN + PP
Sbjct: 516 PLGPPSSPYGAAFTAEKPNSPMMYPQAFNNQNPIVPP 552
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 65.9 bits (159), Expect = 2e-10
Identities = 122/459 (26%), Positives = 157/459 (34%), Gaps = 89/459 (19%)
Query: 402 TAQQQQQQQQQQLPALPP-TPQQQPPLNNHMISQADDLSNPFGQMSLSRQGSTEAADPSA 460
T +Q Q P+ P TP PPL + A +P Q SLS P+
Sbjct: 431 TMSPRQTQASLTSPSRPASTPPDSPPLQAPLSLPA----SPPLQTSLS---------PAV 477
Query: 461 ALFQTPLISQHPQQTSFIMASTGQPLPTSNY------STSSHAPPTQQVLPPQGYMQPPQ 514
+ +PL + HP Q +AS P S+ + SS APP+ Q PP PP
Sbjct: 478 SPLSSPL-TIHPLQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQT-PPASLTTPPL 535
Query: 515 QIQVSYYPPGQYPNSNQQYRP-LSHPVAYSPQRGQQLPQPSQQPGLQPMMPNQ-QQAAYQ 572
+ S PP S P L P +P Q P P P P P+ Q
Sbjct: 536 ENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTP--PPETPSSIATPPPQ 593
Query: 573 GMIGVQQPQNQGLLSSQRSSMGGQMQGLV-------VQYTPLPSYQVPVGSDSQNVVQPP 625
+ P QGL S S + +Q P P P+ + Q P
Sbjct: 594 APPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAP 653
Query: 626 -------FQQPMLVPVSQSVQGGL-PAAGVPVYYSMIPPAQQNGTSPSVGF--LQPPGSE 675
Q P P S VQ P A PV S PP+Q PS+ LQ P S
Sbjct: 654 NALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQ---APPSLAAPPLQVPPSP 710
Query: 676 QYQMPQSPSPCSPPQMPQQYSGVSPSGPGVVVMQLNVPNGPQPPQNPSMVQWSHCKYYSM 735
P SPS PPQ P P + L VP P PP +P M
Sbjct: 711 PASPPMSPSATPPPQAP----------PPLAAPPLQVP--PSPPASPPM----------- 747
Query: 736 DQRGQKPGDLYSPDSSPQANTQ--MSSSPVTSPTQSPAPSPVTSLSSVCTGLSP---LPV 790
SP ++P +++ P+ P PA P++ L+ P P
Sbjct: 748 -----------SPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPP 796
Query: 791 LTQFPRPGGPAQGDGRY----SLLGQPLQYNLSICPPLL 825
L P P G + SL PL PP+L
Sbjct: 797 LQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVL 835
Score = 62.0 bits (149), Expect = 3e-09
Identities = 122/516 (23%), Positives = 174/516 (33%), Gaps = 94/516 (18%)
Query: 311 SRQSSTDSELKSLEPRPWSSTDSDGSVRSMRPPVTKASSFSGISILTRGDSIGSSKGGSA 370
SR + T+ L PRP S R V+ AS S T + +
Sbjct: 180 SRAAGTEVGL----PRPAPSARPRPPTEGPRKSVSSASEHS----TTEPSPAARRRPSAG 231
Query: 371 GRISRPG---MALGAPEVCNQVTSSQSVRGLLPCTAQQQQQQQQQQLPALPPTPQQQPPL 427
G + RP ++ A + + S S RG P Q + + L AL P PQ PP
Sbjct: 232 GGLQRPASRSLSSSATPLSSPARSGPSARGT-PRAPAHPSQPKPKGLQALRP-PQVTPPR 289
Query: 428 NNHMISQADDLSNPFGQMSLSRQGSTEAADPSAALFQTPLISQHPQQTSFIMASTGQPLP 487
+ + S+P S S + P A TPL + P PLP
Sbjct: 290 KDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAA--TPLPATLPPSPPL-----ATPLP 342
Query: 488 TSNYSTSSHAPPTQQVLPPQGYMQPPQQIQVSYYPPGQYPNSNQQYRPLSHPVAYSPQRG 547
+ S S APP+ Q LP P Q PP Q P S Q P+ P + +
Sbjct: 343 LAPPSPS--APPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSL 400
Query: 548 QQLPQPSQQPGLQ-----------------PMMPNQQQAAYQG----------MIGVQQP 580
Q P P LQ M P Q QA+ +Q P
Sbjct: 401 QAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAP 460
Query: 581 QNQGLLSSQRSSMGGQMQGLVVQYTPLP----------SYQVPVGSDSQNVVQPPFQ-QP 629
+ ++S+ + L T P S Q P+ S ++ PP + Q
Sbjct: 461 LSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSS----LIMPPLETQS 516
Query: 630 MLVPVS-QSVQGGLPAAGVPVYYSMIPPAQQNG----TSPSVGFLQPPGSEQYQMPQSPS 684
L P S Q+ L + S+ PP Q T+P + P Q P SP
Sbjct: 517 SLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPL 576
Query: 685 PCSPPQMPQQYSGVSPSGPGVVVMQLNVPNGPQPPQNPSMVQWSHCKYYSMDQRGQKPGD 744
PP+ P + P P + + P PP +P
Sbjct: 577 TTPPPETPSSIATPPPQAPPALASP-PLQGLPSPPLSP---------------------- 613
Query: 745 LYSPDSSPQANTQMSSSPVTSPTQSPAPSPVTSLSS 780
L +P PQA ++ P+ +P PA P++ L++
Sbjct: 614 LATP--PPQAPPXLALPPLQAPPSPPASPPLSPLAT 647
>gi|119943102 CREB binding protein isoform b [Homo sapiens]
Length = 2404
Score = 65.5 bits (158), Expect = 2e-10
Identities = 91/354 (25%), Positives = 136/354 (38%), Gaps = 58/354 (16%)
Query: 498 PPTQQVLPPQGYMQ-PPQQIQVSY----YPPGQYPNSNQQYRPL----SHPVAYSPQRGQ 548
P Q V PP G + P ++QVS + P N P+ + P+ +S Q
Sbjct: 658 PQAQPVRPPNGPLSLPVNRMQVSQGMNSFNPMSLGNVQLPQAPMGPRAASPMNHSVQMNS 717
Query: 549 Q--LPQPSQQPGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSSQRSSMGGQMQ---GLVVQ 603
+P + P P PN A M+ Q+Q L +Q S G M G
Sbjct: 718 MGSVPGMAISPSRMPQPPNMMGAHTNNMMAQAPAQSQFLPQNQFPSSSGAMSVGMGQPPA 777
Query: 604 YTPLPSYQVPVGS--DSQNVVQPPFQQPMLVPVSQSVQGGLPAAGVPVYYSMIPPAQQNG 661
T + QVP + + N++ P Q PV+QS P PPA
Sbjct: 778 QTGVSQGQVPGAALPNPLNMLGPQASQLPCPPVTQSPLHPTP-----------PPASTAA 826
Query: 662 TSPSVGFLQPPGSEQYQMPQSPSPCSPPQMPQQYSGVSPSG-PGVVVMQLNVPNGPQPPQ 720
PS+ PPG P P+ + P P SG +P+ PG +VP+ Q
Sbjct: 827 GMPSLQHTTPPG----MTPPQPAAPTQPSTPVSSSGQTPTPTPG------SVPSATQTQS 876
Query: 721 NPSMVQWSHCKYYSMDQRGQKPGDLYSPDSSPQANTQMSSSPVTSP---------TQSPA 771
P++ + + Q +P + +P SS Q T + + P +P + P
Sbjct: 877 TPTVQAAAQAQVTPQPQTPVQPPSVATPQSSQQQPTPVHAQPPGTPLSQAAASIDNRVPT 936
Query: 772 PSPVTSLSSVCTGLSP-LPVL-----TQF----PRPGGPAQGDGRYSLLGQPLQ 815
PS V S + P +PVL TQ P P G ++G+ R ++ + LQ
Sbjct: 937 PSSVASAETNSQQPGPDVPVLEMKTETQAEDTEPDP-GESKGEPRSEMMEEDLQ 989
Score = 56.2 bits (134), Expect = 1e-07
Identities = 103/369 (27%), Positives = 136/369 (36%), Gaps = 87/369 (23%)
Query: 406 QQQQQQQQLPALPPTPQQQPPLNNHMISQADDLSNPFGQMSLSRQGSTEAADPSAALFQT 465
+QQQ Q +L ++ +N + Q L +P S T PS QT
Sbjct: 1813 RQQQIQHRLQQAQLMRRRMATMNTRNVPQ-QSLPSP-----TSAPPGTPTQQPSTP--QT 1864
Query: 466 PLISQHPQQTSFIMASTGQP--LPTSNYSTSSHAPPTQQVLPPQGYMQPP---------- 513
P PQ + M+ G P T +T S PT QV P QPP
Sbjct: 1865 PQPPAQPQPSPVSMSPAGFPSVARTQPPTTVSTGKPTSQVPAPPPPAQPPPAAVEAARQI 1924
Query: 514 ----QQIQVSY-------YPPGQ----------YPNSNQQYRP--LSHPVAYS--PQRGQ 548
QQ Q Y PPG+ P S RP +S PV S P + Q
Sbjct: 1925 EREAQQQQHLYRVNINNSMPPGRTGMGTPGSQMAPVSLNVPRPNQVSGPVMPSMPPGQWQ 1984
Query: 549 QLPQPSQQ--PGL-QPMMPNQQQAAYQG--MIGVQQPQN------QGLLSSQRSSMGGQM 597
Q P P QQ PGL +P++ Q QAA G M VQ P++ Q LL + +S Q
Sbjct: 1985 QAPLPQQQPMPGLPRPVISMQAQAAVAGPRMPSVQPPRSISPSALQDLLRTLKSPSSPQQ 2044
Query: 598 QGLVVQYTPLPSYQVPVGSDSQNVVQPPFQQPMLVPVSQSVQGGLPAAGVPVYYSMIPPA 657
Q V+ + Q+ Q + QP + P Q GL +
Sbjct: 2045 QQQVLNILK-SNPQLMAAFIKQRTAKYVANQPGMQP-----QPGLQS------------- 2085
Query: 658 QQNGTSPSVGFLQPPGSEQYQMPQS--PSPCSPPQMPQQYSGVSPSGPGVVVMQLNVPNG 715
Q G P G Q P + Q+ P P PPQ Q G++P G + +M
Sbjct: 2086 -QPGMQPQPGMHQQPSLQNLNAMQAGVPRPGVPPQQ-QAMGGLNPQGQALNIM------- 2136
Query: 716 PQPPQNPSM 724
P NP+M
Sbjct: 2137 -NPGHNPNM 2144
Score = 52.0 bits (123), Expect = 3e-06
Identities = 68/235 (28%), Positives = 83/235 (35%), Gaps = 57/235 (24%)
Query: 404 QQQQQQQQQQLPA--------------------LPPTPQQQPPLNNHMISQADDLSNPFG 443
QQQQQQQQQQ A PP QQQ + H+ Q + G
Sbjct: 2169 QQQQQQQQQQGSAGMAGGMAGHGQFQQPQGPGGYPPAMQQQQRMQQHLPLQGSSM----G 2224
Query: 444 QMSLSRQGSTEAADPSAALFQTPLISQ-------HPQQTSFIMASTGQPLPTSNYSTSSH 496
QM+ + P TP I Q QQ + S GQP P S
Sbjct: 2225 QMAAQMGQLGQMGQPGLGADSTPNIQQALQQRILQQQQMKQQIGSPGQPNPMS------- 2277
Query: 497 APPTQQVL--PPQGYMQPPQQIQVSYYPPGQYPNSNQQYRPLSHPVAYSPQ-RGQQLPQP 553
P Q +L PQ P QQI S + P Q RP S P SP R Q P P
Sbjct: 2278 --PQQHMLSGQPQASHLPGQQIATSLSNQVRSPAPVQSPRPQSQPPHSSPSPRIQPQPSP 2335
Query: 554 --------SQQPGLQPMMPNQQQAAYQG------MIGVQQPQNQGLLSSQRSSMG 594
S PGL M + + G M+ ++ LSS+ S +G
Sbjct: 2336 HHVSPQTGSPHPGLAVTMASSIDQGHLGNPEQSAMLPQLNTPSRSALSSELSLVG 2390
Score = 46.2 bits (108), Expect = 1e-04
Identities = 106/442 (23%), Positives = 146/442 (33%), Gaps = 85/442 (19%)
Query: 413 QLPALPPTPQQQPP-----------------------LNNHMISQADDLSNPFGQMSLSR 449
Q+PA PP P Q PP +NN M + P QM+
Sbjct: 1903 QVPA-PPPPAQPPPAAVEAARQIEREAQQQQHLYRVNINNSMPPGRTGMGTPGSQMAPVS 1961
Query: 450 ---------QGSTEAADPSAALFQTPLISQHPQQTSFIMASTGQPLPTSNYSTSSHAPPT 500
G + P Q PL Q P M +P+ + + P
Sbjct: 1962 LNVPRPNQVSGPVMPSMPPGQWQQAPLPQQQP------MPGLPRPVISMQAQAAVAGPRM 2015
Query: 501 QQVLPPQGYMQPPQQIQVSYYPPGQYPNSNQQYRPL--SHP---VAYSPQR--------- 546
V PP+ Q + P QQ + S+P A+ QR
Sbjct: 2016 PSVQPPRSISPSALQDLLRTLKSPSSPQQQQQVLNILKSNPQLMAAFIKQRTAKYVANQP 2075
Query: 547 GQQLPQPS--QQPGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSSQRSSMGG---QMQGLV 601
G Q PQP QPG+QP QQ + Q + +Q + + Q+ +MGG Q Q L
Sbjct: 2076 GMQ-PQPGLQSQPGMQPQPGMHQQPSLQNLNAMQAGVPRPGVPPQQQAMGGLNPQGQALN 2134
Query: 602 VQ---YTPLPSYQVPVGSD---SQNVVQPPFQQPMLVPVSQSVQGGLPAAGVPVYYSMIP 655
+ + P + P + Q + Q QQ Q QG AG +
Sbjct: 2135 IMNPGHNPNMASMNPQYREMLRRQLLQQQQQQQQQQQQQQQQQQGSAGMAGGMAGHGQFQ 2194
Query: 656 PAQQNGTSPSVGFLQPPGSEQYQMPQSPSPCSPPQMPQQYSGVSPSGPGVVVMQLNVPNG 715
Q G G+ PP +Q Q Q P M Q + + G Q+ P G
Sbjct: 2195 QPQGPG-----GY--PPAMQQQQRMQQHLPLQGSSMGQMAAQMGQLG------QMGQP-G 2240
Query: 716 PQPPQNPSMVQWSHCKYYSMDQRGQKPGDLYSPDSSPQANTQMSSSPVTSPTQSPAPSPV 775
P++ Q + Q Q+ G P+ +S P S P
Sbjct: 2241 LGADSTPNIQQALQQRILQQQQMKQQIGSPGQPNPMSPQQHMLSGQPQAS--HLPGQQIA 2298
Query: 776 TSLSSVCTGLSPLPVLTQFPRP 797
TSLS+ SP PV Q PRP
Sbjct: 2299 TSLSNQVR--SPAPV--QSPRP 2316
Score = 45.8 bits (107), Expect = 2e-04
Identities = 118/513 (23%), Positives = 175/513 (34%), Gaps = 99/513 (19%)
Query: 368 GSAGRISRPGMALGAPEVCNQVTSSQSVRGL-LPCTAQQQQQQQQQ---QLPALPPTPQQ 423
GS G + +L P + + ++ L LP Q Q Q Q Q Q PA P T QQ
Sbjct: 420 GSVGTGQQNATSLSNPNPIDPSSMQRAYAALGLPYMNQPQTQLQPQVPGQQPAQPQTHQQ 479
Query: 424 QPPLNNHMISQADDLSNPFGQ--MSLSRQGSTEAADPSAALFQTPLISQHPQQTSFIMAS 481
LN P G M++ G T P LIS+ S + S
Sbjct: 480 MRTLN------------PLGNNPMNIPAGGITTDQQPPN------LISE-----SALPTS 516
Query: 482 TGQPLPTSNYSTSSHAPPTQQVLPPQGYMQPPQQIQVSYYPPGQYPNSNQQYR------- 534
G P N ++S T +P PP V G + + Q R
Sbjct: 517 LGATNPLMNDGSNSGNIGTLSTIPTAA---PPSSTGVR---KGWHEHVTQDLRSHLVHKL 570
Query: 535 -----PLSHPVAYSPQRGQQLPQPSQQPGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSSQ 589
P P A +R + L +++ + Y ++ + + Q L +
Sbjct: 571 VQAIFPTPDPAALKDRRMENLVAYAKKVEGDMYESANSRDEYYHLLAEKIYKIQKELEEK 630
Query: 590 RSSMGGQMQGLVVQYTPLPSYQVPVGSDSQNVVQPPFQQPMLVPVSQSVQGGLPAAGVPV 649
R S + QG++ LP+ P QP ++P +Q V+ +PV
Sbjct: 631 RRSRLHK-QGILGNQPALPA---------------PGAQPPVIPQAQPVRPPNGPLSLPV 674
Query: 650 YYSMIPPAQQNGTSPSVGFLQPPGSEQYQMPQSPSPCSPPQMPQQYSGVSPSGPGVVVMQ 709
+ + S+G +Q P Q P P SP Q + + S PG+ +
Sbjct: 675 NRMQVSQGMNSFNPMSLGNVQLP-----QAPMGPRAASPMNHSVQMNSMG-SVPGMAISP 728
Query: 710 LNVPNGP---------QPPQNPSMVQW---------SHCKYYSMDQ--------RGQKPG 743
+P P Q P+ Q+ S M Q +GQ PG
Sbjct: 729 SRMPQPPNMMGAHTNNMMAQAPAQSQFLPQNQFPSSSGAMSVGMGQPPAQTGVSQGQVPG 788
Query: 744 -DLYSPDS--SPQANTQMSSSPVTSPTQSPAPSPVTSLSSVCTGLSPLPVLTQFPRPGGP 800
L +P + PQA +Q+ PVT P P P ++ + + + P P+P P
Sbjct: 789 AALPNPLNMLGPQA-SQLPCPPVTQSPLHPTPPPASTAAGMPSLQHTTPPGMTPPQPAAP 847
Query: 801 AQGDGRYSLLGQPLQYNLSICPPLLHGQSTYTV 833
Q S GQ P QST TV
Sbjct: 848 TQPSTPVSSSGQTPTPTPGSVPSATQTQSTPTV 880
Score = 40.8 bits (94), Expect = 0.006
Identities = 65/267 (24%), Positives = 92/267 (34%), Gaps = 38/267 (14%)
Query: 374 SRPGMALGAPEVCNQVTSSQSVRGLLPCTAQQQQQQQQQQLPALPPTPQQQPPLNNHMIS 433
S PGMA+ +++ ++ G Q Q Q LP Q Q P ++ +S
Sbjct: 720 SVPGMAISP----SRMPQPPNMMGAHTNNMMAQAPAQSQFLP------QNQFPSSSGAMS 769
Query: 434 QADDLSNPFGQMSLSRQGSTEAA---------DPSAALFQTPLISQHPQQTSFIMASTGQ 484
+ P Q +S QG A P A+ P ++Q P + AST
Sbjct: 770 VG--MGQPPAQTGVS-QGQVPGAALPNPLNMLGPQASQLPCPPVTQSPLHPTPPPASTAA 826
Query: 485 PLPTSNYSTSSHAPPTQQVLPPQGYMQPPQQIQVSYYPPGQYPNSNQQYRPLSHPVAYSP 544
+P+ ++T P Q P Q Q PG P++ Q S P +
Sbjct: 827 GMPSLQHTTPPGMTPPQPAAPTQPSTPVSSSGQTPTPTPGSVPSATQTQ---STPTVQAA 883
Query: 545 QRGQQLPQPSQQPGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSSQRSSMGGQMQGLVVQY 604
+ Q PQP Q P P + Q + Q QP L Q +
Sbjct: 884 AQAQVTPQP-QTPVQPPSVATPQSSQQQPTPVHAQPPGTPL---------SQAAASIDNR 933
Query: 605 TPLPSYQVPVGSDSQNVVQPPFQQPML 631
P PS V S N QP P+L
Sbjct: 934 VPTPS---SVASAETNSQQPGPDVPVL 957
Score = 32.3 bits (72), Expect = 2.2
Identities = 29/80 (36%), Positives = 34/80 (42%), Gaps = 11/80 (13%)
Query: 734 SMDQRGQKPGDLYSPDSSPQAN-TQMSSSPVT-SPTQSPAPSPVT----SLSSVCTGLSP 787
+M+ R L SP S+P TQ S+P T P P PSPV+ SV P
Sbjct: 1833 TMNTRNVPQQSLPSPTSAPPGTPTQQPSTPQTPQPPAQPQPSPVSMSPAGFPSVARTQPP 1892
Query: 788 LPVLT-----QFPRPGGPAQ 802
V T Q P P PAQ
Sbjct: 1893 TTVSTGKPTSQVPAPPPPAQ 1912
>gi|119943104 CREB binding protein isoform a [Homo sapiens]
Length = 2442
Score = 65.5 bits (158), Expect = 2e-10
Identities = 91/354 (25%), Positives = 136/354 (38%), Gaps = 58/354 (16%)
Query: 498 PPTQQVLPPQGYMQ-PPQQIQVSY----YPPGQYPNSNQQYRPL----SHPVAYSPQRGQ 548
P Q V PP G + P ++QVS + P N P+ + P+ +S Q
Sbjct: 696 PQAQPVRPPNGPLSLPVNRMQVSQGMNSFNPMSLGNVQLPQAPMGPRAASPMNHSVQMNS 755
Query: 549 Q--LPQPSQQPGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSSQRSSMGGQMQ---GLVVQ 603
+P + P P PN A M+ Q+Q L +Q S G M G
Sbjct: 756 MGSVPGMAISPSRMPQPPNMMGAHTNNMMAQAPAQSQFLPQNQFPSSSGAMSVGMGQPPA 815
Query: 604 YTPLPSYQVPVGS--DSQNVVQPPFQQPMLVPVSQSVQGGLPAAGVPVYYSMIPPAQQNG 661
T + QVP + + N++ P Q PV+QS P PPA
Sbjct: 816 QTGVSQGQVPGAALPNPLNMLGPQASQLPCPPVTQSPLHPTP-----------PPASTAA 864
Query: 662 TSPSVGFLQPPGSEQYQMPQSPSPCSPPQMPQQYSGVSPSG-PGVVVMQLNVPNGPQPPQ 720
PS+ PPG P P+ + P P SG +P+ PG +VP+ Q
Sbjct: 865 GMPSLQHTTPPG----MTPPQPAAPTQPSTPVSSSGQTPTPTPG------SVPSATQTQS 914
Query: 721 NPSMVQWSHCKYYSMDQRGQKPGDLYSPDSSPQANTQMSSSPVTSP---------TQSPA 771
P++ + + Q +P + +P SS Q T + + P +P + P
Sbjct: 915 TPTVQAAAQAQVTPQPQTPVQPPSVATPQSSQQQPTPVHAQPPGTPLSQAAASIDNRVPT 974
Query: 772 PSPVTSLSSVCTGLSP-LPVL-----TQF----PRPGGPAQGDGRYSLLGQPLQ 815
PS V S + P +PVL TQ P P G ++G+ R ++ + LQ
Sbjct: 975 PSSVASAETNSQQPGPDVPVLEMKTETQAEDTEPDP-GESKGEPRSEMMEEDLQ 1027
Score = 56.2 bits (134), Expect = 1e-07
Identities = 103/369 (27%), Positives = 136/369 (36%), Gaps = 87/369 (23%)
Query: 406 QQQQQQQQLPALPPTPQQQPPLNNHMISQADDLSNPFGQMSLSRQGSTEAADPSAALFQT 465
+QQQ Q +L ++ +N + Q L +P S T PS QT
Sbjct: 1851 RQQQIQHRLQQAQLMRRRMATMNTRNVPQ-QSLPSP-----TSAPPGTPTQQPSTP--QT 1902
Query: 466 PLISQHPQQTSFIMASTGQP--LPTSNYSTSSHAPPTQQVLPPQGYMQPP---------- 513
P PQ + M+ G P T +T S PT QV P QPP
Sbjct: 1903 PQPPAQPQPSPVSMSPAGFPSVARTQPPTTVSTGKPTSQVPAPPPPAQPPPAAVEAARQI 1962
Query: 514 ----QQIQVSY-------YPPGQ----------YPNSNQQYRP--LSHPVAYS--PQRGQ 548
QQ Q Y PPG+ P S RP +S PV S P + Q
Sbjct: 1963 EREAQQQQHLYRVNINNSMPPGRTGMGTPGSQMAPVSLNVPRPNQVSGPVMPSMPPGQWQ 2022
Query: 549 QLPQPSQQ--PGL-QPMMPNQQQAAYQG--MIGVQQPQN------QGLLSSQRSSMGGQM 597
Q P P QQ PGL +P++ Q QAA G M VQ P++ Q LL + +S Q
Sbjct: 2023 QAPLPQQQPMPGLPRPVISMQAQAAVAGPRMPSVQPPRSISPSALQDLLRTLKSPSSPQQ 2082
Query: 598 QGLVVQYTPLPSYQVPVGSDSQNVVQPPFQQPMLVPVSQSVQGGLPAAGVPVYYSMIPPA 657
Q V+ + Q+ Q + QP + P Q GL +
Sbjct: 2083 QQQVLNILK-SNPQLMAAFIKQRTAKYVANQPGMQP-----QPGLQS------------- 2123
Query: 658 QQNGTSPSVGFLQPPGSEQYQMPQS--PSPCSPPQMPQQYSGVSPSGPGVVVMQLNVPNG 715
Q G P G Q P + Q+ P P PPQ Q G++P G + +M
Sbjct: 2124 -QPGMQPQPGMHQQPSLQNLNAMQAGVPRPGVPPQQ-QAMGGLNPQGQALNIM------- 2174
Query: 716 PQPPQNPSM 724
P NP+M
Sbjct: 2175 -NPGHNPNM 2182
Score = 52.0 bits (123), Expect = 3e-06
Identities = 68/235 (28%), Positives = 83/235 (35%), Gaps = 57/235 (24%)
Query: 404 QQQQQQQQQQLPA--------------------LPPTPQQQPPLNNHMISQADDLSNPFG 443
QQQQQQQQQQ A PP QQQ + H+ Q + G
Sbjct: 2207 QQQQQQQQQQGSAGMAGGMAGHGQFQQPQGPGGYPPAMQQQQRMQQHLPLQGSSM----G 2262
Query: 444 QMSLSRQGSTEAADPSAALFQTPLISQ-------HPQQTSFIMASTGQPLPTSNYSTSSH 496
QM+ + P TP I Q QQ + S GQP P S
Sbjct: 2263 QMAAQMGQLGQMGQPGLGADSTPNIQQALQQRILQQQQMKQQIGSPGQPNPMS------- 2315
Query: 497 APPTQQVL--PPQGYMQPPQQIQVSYYPPGQYPNSNQQYRPLSHPVAYSPQ-RGQQLPQP 553
P Q +L PQ P QQI S + P Q RP S P SP R Q P P
Sbjct: 2316 --PQQHMLSGQPQASHLPGQQIATSLSNQVRSPAPVQSPRPQSQPPHSSPSPRIQPQPSP 2373
Query: 554 --------SQQPGLQPMMPNQQQAAYQG------MIGVQQPQNQGLLSSQRSSMG 594
S PGL M + + G M+ ++ LSS+ S +G
Sbjct: 2374 HHVSPQTGSPHPGLAVTMASSIDQGHLGNPEQSAMLPQLNTPSRSALSSELSLVG 2428
Score = 46.2 bits (108), Expect = 1e-04
Identities = 106/442 (23%), Positives = 146/442 (33%), Gaps = 85/442 (19%)
Query: 413 QLPALPPTPQQQPP-----------------------LNNHMISQADDLSNPFGQMSLSR 449
Q+PA PP P Q PP +NN M + P QM+
Sbjct: 1941 QVPA-PPPPAQPPPAAVEAARQIEREAQQQQHLYRVNINNSMPPGRTGMGTPGSQMAPVS 1999
Query: 450 ---------QGSTEAADPSAALFQTPLISQHPQQTSFIMASTGQPLPTSNYSTSSHAPPT 500
G + P Q PL Q P M +P+ + + P
Sbjct: 2000 LNVPRPNQVSGPVMPSMPPGQWQQAPLPQQQP------MPGLPRPVISMQAQAAVAGPRM 2053
Query: 501 QQVLPPQGYMQPPQQIQVSYYPPGQYPNSNQQYRPL--SHP---VAYSPQR--------- 546
V PP+ Q + P QQ + S+P A+ QR
Sbjct: 2054 PSVQPPRSISPSALQDLLRTLKSPSSPQQQQQVLNILKSNPQLMAAFIKQRTAKYVANQP 2113
Query: 547 GQQLPQPS--QQPGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSSQRSSMGG---QMQGLV 601
G Q PQP QPG+QP QQ + Q + +Q + + Q+ +MGG Q Q L
Sbjct: 2114 GMQ-PQPGLQSQPGMQPQPGMHQQPSLQNLNAMQAGVPRPGVPPQQQAMGGLNPQGQALN 2172
Query: 602 VQ---YTPLPSYQVPVGSD---SQNVVQPPFQQPMLVPVSQSVQGGLPAAGVPVYYSMIP 655
+ + P + P + Q + Q QQ Q QG AG +
Sbjct: 2173 IMNPGHNPNMASMNPQYREMLRRQLLQQQQQQQQQQQQQQQQQQGSAGMAGGMAGHGQFQ 2232
Query: 656 PAQQNGTSPSVGFLQPPGSEQYQMPQSPSPCSPPQMPQQYSGVSPSGPGVVVMQLNVPNG 715
Q G G+ PP +Q Q Q P M Q + + G Q+ P G
Sbjct: 2233 QPQGPG-----GY--PPAMQQQQRMQQHLPLQGSSMGQMAAQMGQLG------QMGQP-G 2278
Query: 716 PQPPQNPSMVQWSHCKYYSMDQRGQKPGDLYSPDSSPQANTQMSSSPVTSPTQSPAPSPV 775
P++ Q + Q Q+ G P+ +S P S P
Sbjct: 2279 LGADSTPNIQQALQQRILQQQQMKQQIGSPGQPNPMSPQQHMLSGQPQAS--HLPGQQIA 2336
Query: 776 TSLSSVCTGLSPLPVLTQFPRP 797
TSLS+ SP PV Q PRP
Sbjct: 2337 TSLSNQVR--SPAPV--QSPRP 2354
Score = 45.8 bits (107), Expect = 2e-04
Identities = 118/513 (23%), Positives = 175/513 (34%), Gaps = 99/513 (19%)
Query: 368 GSAGRISRPGMALGAPEVCNQVTSSQSVRGL-LPCTAQQQQQQQQQ---QLPALPPTPQQ 423
GS G + +L P + + ++ L LP Q Q Q Q Q Q PA P T QQ
Sbjct: 458 GSVGTGQQNATSLSNPNPIDPSSMQRAYAALGLPYMNQPQTQLQPQVPGQQPAQPQTHQQ 517
Query: 424 QPPLNNHMISQADDLSNPFGQ--MSLSRQGSTEAADPSAALFQTPLISQHPQQTSFIMAS 481
LN P G M++ G T P LIS+ S + S
Sbjct: 518 MRTLN------------PLGNNPMNIPAGGITTDQQPPN------LISE-----SALPTS 554
Query: 482 TGQPLPTSNYSTSSHAPPTQQVLPPQGYMQPPQQIQVSYYPPGQYPNSNQQYR------- 534
G P N ++S T +P PP V G + + Q R
Sbjct: 555 LGATNPLMNDGSNSGNIGTLSTIPTAA---PPSSTGVR---KGWHEHVTQDLRSHLVHKL 608
Query: 535 -----PLSHPVAYSPQRGQQLPQPSQQPGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSSQ 589
P P A +R + L +++ + Y ++ + + Q L +
Sbjct: 609 VQAIFPTPDPAALKDRRMENLVAYAKKVEGDMYESANSRDEYYHLLAEKIYKIQKELEEK 668
Query: 590 RSSMGGQMQGLVVQYTPLPSYQVPVGSDSQNVVQPPFQQPMLVPVSQSVQGGLPAAGVPV 649
R S + QG++ LP+ P QP ++P +Q V+ +PV
Sbjct: 669 RRSRLHK-QGILGNQPALPA---------------PGAQPPVIPQAQPVRPPNGPLSLPV 712
Query: 650 YYSMIPPAQQNGTSPSVGFLQPPGSEQYQMPQSPSPCSPPQMPQQYSGVSPSGPGVVVMQ 709
+ + S+G +Q P Q P P SP Q + + S PG+ +
Sbjct: 713 NRMQVSQGMNSFNPMSLGNVQLP-----QAPMGPRAASPMNHSVQMNSMG-SVPGMAISP 766
Query: 710 LNVPNGP---------QPPQNPSMVQW---------SHCKYYSMDQ--------RGQKPG 743
+P P Q P+ Q+ S M Q +GQ PG
Sbjct: 767 SRMPQPPNMMGAHTNNMMAQAPAQSQFLPQNQFPSSSGAMSVGMGQPPAQTGVSQGQVPG 826
Query: 744 -DLYSPDS--SPQANTQMSSSPVTSPTQSPAPSPVTSLSSVCTGLSPLPVLTQFPRPGGP 800
L +P + PQA +Q+ PVT P P P ++ + + + P P+P P
Sbjct: 827 AALPNPLNMLGPQA-SQLPCPPVTQSPLHPTPPPASTAAGMPSLQHTTPPGMTPPQPAAP 885
Query: 801 AQGDGRYSLLGQPLQYNLSICPPLLHGQSTYTV 833
Q S GQ P QST TV
Sbjct: 886 TQPSTPVSSSGQTPTPTPGSVPSATQTQSTPTV 918
Score = 40.8 bits (94), Expect = 0.006
Identities = 65/267 (24%), Positives = 92/267 (34%), Gaps = 38/267 (14%)
Query: 374 SRPGMALGAPEVCNQVTSSQSVRGLLPCTAQQQQQQQQQQLPALPPTPQQQPPLNNHMIS 433
S PGMA+ +++ ++ G Q Q Q LP Q Q P ++ +S
Sbjct: 758 SVPGMAISP----SRMPQPPNMMGAHTNNMMAQAPAQSQFLP------QNQFPSSSGAMS 807
Query: 434 QADDLSNPFGQMSLSRQGSTEAA---------DPSAALFQTPLISQHPQQTSFIMASTGQ 484
+ P Q +S QG A P A+ P ++Q P + AST
Sbjct: 808 VG--MGQPPAQTGVS-QGQVPGAALPNPLNMLGPQASQLPCPPVTQSPLHPTPPPASTAA 864
Query: 485 PLPTSNYSTSSHAPPTQQVLPPQGYMQPPQQIQVSYYPPGQYPNSNQQYRPLSHPVAYSP 544
+P+ ++T P Q P Q Q PG P++ Q S P +
Sbjct: 865 GMPSLQHTTPPGMTPPQPAAPTQPSTPVSSSGQTPTPTPGSVPSATQTQ---STPTVQAA 921
Query: 545 QRGQQLPQPSQQPGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSSQRSSMGGQMQGLVVQY 604
+ Q PQP Q P P + Q + Q QP L Q +
Sbjct: 922 AQAQVTPQP-QTPVQPPSVATPQSSQQQPTPVHAQPPGTPL---------SQAAASIDNR 971
Query: 605 TPLPSYQVPVGSDSQNVVQPPFQQPML 631
P PS V S N QP P+L
Sbjct: 972 VPTPS---SVASAETNSQQPGPDVPVL 995
Score = 32.3 bits (72), Expect = 2.2
Identities = 29/80 (36%), Positives = 34/80 (42%), Gaps = 11/80 (13%)
Query: 734 SMDQRGQKPGDLYSPDSSPQAN-TQMSSSPVT-SPTQSPAPSPVT----SLSSVCTGLSP 787
+M+ R L SP S+P TQ S+P T P P PSPV+ SV P
Sbjct: 1871 TMNTRNVPQQSLPSPTSAPPGTPTQQPSTPQTPQPPAQPQPSPVSMSPAGFPSVARTQPP 1930
Query: 788 LPVLT-----QFPRPGGPAQ 802
V T Q P P PAQ
Sbjct: 1931 TTVSTGKPTSQVPAPPPPAQ 1950
>gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens]
Length = 1336
Score = 63.9 bits (154), Expect = 7e-10
Identities = 123/462 (26%), Positives = 148/462 (32%), Gaps = 106/462 (22%)
Query: 411 QQQLPALPPTPQQQPPLNNHMISQADDLSNPF---GQMSLSRQGSTEAADPSAALFQTPL 467
Q+Q+ + P P PL PF G MS QG FQ P
Sbjct: 566 QKQVEQIQPPPSSGTPLLG---------PQPFPGQGPMSQIPQG-----------FQQP- 604
Query: 468 ISQHP-QQTSFIMASTGQPLPTSNY-------STSSHAPPTQQVLP-PQGYMQPPQQIQV 518
HP QQ MA G P P + PP Q PQG+M P Q
Sbjct: 605 ---HPSQQMPMNMAQMGPPGPQGQFRPPGPQGQMGPQGPPLHQGGGGPQGFMGP----QG 657
Query: 519 SYYPPGQYPNSNQQYRPLS---HPVAYSPQRGQQLPQPSQQPGLQPMMPNQQQAAYQGMI 575
PP P + P HP + P Q P P G Q M Q QG I
Sbjct: 658 PQGPPQGLPRPQDMHGPQGMQRHPGPHGPLGPQGPPGPQGSSGPQGHMGPQGPPGPQGHI 717
Query: 576 GVQQPQN-QGLLSSQRSSMGGQMQGLV----VQYTPLPSYQVPVGSDSQNVVQPPFQQPM 630
G Q P QG L Q MQG +Q P P + + G SQ + P Q P+
Sbjct: 718 GPQGPPGPQGHLGPQGPPGTQGMQGPPGPRGMQGPPHP-HGIQGGPGSQGIQGPVSQGPL 776
Query: 631 LVPVSQSVQG--GLPAAGVPVYYSMI---PPAQQNGTSPSVGFLQ--------------- 670
+ + +QG G P MI PP + G P G L
Sbjct: 777 MGLNPRGMQGPPGPRENQGPAPQGMIMGHPPQEMRGPHPPGGLLGHGPQEMRGPQEIRGM 836
Query: 671 ------------------PPGSEQYQMPQSPSPCSPPQMPQQYSGVSPSGPGVVVMQLNV 712
PPGS+ Q P S PPQ Q P GP Q N
Sbjct: 837 QGPPPQGSMLGPPQELRGPPGSQSQQGPPQGSLGPPPQGGMQ----GPPGP---QGQQNP 889
Query: 713 PNGPQPPQNPSMVQWSHCKYYS------MDQRGQKPGDLYSPDSSPQANTQMSSS--PVT 764
GP P Q P Q +Q GQ G P P Q + P
Sbjct: 890 ARGPHPSQGPIPFQQQKTPLLGDGPRAPFNQEGQSTG---PPPLIPGLGQQGAQGRIPPL 946
Query: 765 SPTQSPAPSPVTSLSSVCTGLSPLPVLTQFPRPGGPAQGDGR 806
+P Q P P+ S + P+ + + GGP G R
Sbjct: 947 NPGQGPGPNKGDSRGPPNHHMGPMSE-RRHEQSGGPEHGPER 987
>gi|32307128 nuclear receptor coactivator 6 [Homo sapiens]
Length = 2063
Score = 63.2 bits (152), Expect = 1e-09
Identities = 114/425 (26%), Positives = 149/425 (35%), Gaps = 80/425 (18%)
Query: 404 QQQQQQQQQQLPALPPTPQQQ------------------PPLNNHMISQADDLSNPFGQM 445
QQQQQQQQQQL A PP QQ PP N + S A L P Q
Sbjct: 276 QQQQQQQQQQLQARPPQQHQQQQPQGIRPQFTAPTQVPVPPGWNQLPSGA--LQPPPAQG 333
Query: 446 SL----SRQGSTEA-----------ADPSAALFQTPLISQHPQQTSFIMASTGQPLPTSN 490
SL + QG +A A PS A QTP P AS
Sbjct: 334 SLGTMTANQGWKKAPLPGPMQQQLQARPSLATVQTPSHPPPPYPFGSQQASQAHTNFPQM 393
Query: 491 YSTSSHAPPTQQVLP--PQGYMQPPQQIQVSYYPPGQYPNSNQQYRPLSHPVAYS----- 543
+ P + L P P QQ ++ P P+S QQ P S P
Sbjct: 394 SNPGQFTAPQMKSLQGGPSRVPTPLQQPHLTNKSPASSPSSFQQGSPASSPTVNQTQQQM 453
Query: 544 ---PQRGQQLPQPSQQ----PGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSSQRSSMGGQ 596
P + LPQ QQ PG PM+ Q M+ QQP NQG S +GG
Sbjct: 454 GPRPPQNNPLPQGFQQPVSSPGRNPMV-QQGNVPPNFMVMQQQPPNQG-PQSLHPGLGGM 511
Query: 597 MQGLVVQYTPLPSYQVPVGSDSQNVVQPPFQQPMLVPVSQSVQGGLPAAGVPVYYSMIPP 656
+ ++P G S P F Q + + + G +G P
Sbjct: 512 PK------------RLPPGF-SAGQANPNFMQGQVPSTTATTPGN---SGAPQL-----Q 550
Query: 657 AQQNGTSPSVGFLQPPGSEQYQMPQSPSPCSPPQMPQQYSGVSPSGPGVV-VMQLNVPNG 715
A QN + G P Q Q+ P P + + ++ G V Q+N+ N
Sbjct: 551 ANQN-VQHAGGQGAGPPQNQMQVSHGPPNMMQPSLMGIHGNMNNQQAGTSGVPQVNLSNM 609
Query: 716 PQPPQN--PSMVQWSHCKYY-SMDQRGQKPGDLYSPDSSPQANTQM---SSSPVTSPTQS 769
PQ PS + H + S Q Q+ G L + + Q+ V P+Q+
Sbjct: 610 QGQPQQGPPSQLMGMHQQIVPSQGQMVQQQGTLNPQNPMILSRAQLMPQGQMMVNPPSQN 669
Query: 770 PAPSP 774
PSP
Sbjct: 670 LGPSP 674
Score = 62.8 bits (151), Expect = 2e-09
Identities = 92/336 (27%), Positives = 130/336 (38%), Gaps = 61/336 (18%)
Query: 513 PQQIQVSYYPPGQYPNSNQQYRPLSHP-------VAYSPQRGQQLPQPSQQPGLQPMMPN 565
P+ + S PPG YP+ + RPL VA PQ QQ PQP QP P+
Sbjct: 961 PKLPEFSNRPPG-YPSQPVEQRPLQQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQPPPPS 1019
Query: 566 QQQAAYQGMIGVQQPQNQGLLSSQRSSMGGQMQGLVVQYTPLPSYQVPVGSDSQNVVQPP 625
Q Q+ Q QQ Q Q ++ ++ V Q P + P+ DSQ + P
Sbjct: 1020 QPQSQQQ-----QQQQQQMMMMLMMQQDPKSVRLPVSQNVHPP--RGPLNPDSQRM---P 1069
Query: 626 FQQPMLVPVSQSVQGGLPAAGVPVYYSMIPPAQQNGTSPSVGFLQPPGSEQYQMPQSPSP 685
QQ VPV S+QG PA+ +PP+ P + P GS +M SP
Sbjct: 1070 MQQSGSVPVMVSLQG--PAS--------VPPSPDKQRMP-MPVNTPLGSNSRKMVYQESP 1118
Query: 686 CSP--------PQMPQQYSGVSPSGPGVVVMQLNVPNGPQPPQNPSMVQWSHCKYYSMDQ 737
+P +P+ +PS PG N+P+ PQN M+
Sbjct: 1119 QNPSSSPLAEMASLPEASGSEAPSVPG---GPNNMPSHVVLPQNQLMM------------ 1163
Query: 738 RGQKPGDLYSPDSSPQANTQMSSSPVTSPTQ------SPAPSPVTSLSSVCTGLSPLPVL 791
G KPG SP S+ Q T + P+ + A TS SP P
Sbjct: 1164 TGPKPGP--SPLSATQGATPQQPPVNSLPSSHGHHFPNVAAPTQTSRPKTPNRASPRPYY 1221
Query: 792 TQFPRPGGPAQGDGRYSLLGQPLQYNLS-ICPPLLH 826
Q P P+ SL + L +++ + PP ++
Sbjct: 1222 PQTPNNRPPSTEPSEISLSPERLNASIAGLFPPQIN 1257
Score = 47.0 bits (110), Expect = 9e-05
Identities = 92/396 (23%), Positives = 133/396 (33%), Gaps = 90/396 (22%)
Query: 404 QQQQQQQQQQLPALPPTPQQQPPLNNHMISQADDLSNPFGQMSLSRQGSTEAADPSAALF 463
QQ Q Q + P PQQQP Q S P Q
Sbjct: 984 QQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQPPPPSQPQSQ------------------- 1024
Query: 464 QTPLISQHPQQTSFIMASTGQPLPTSNYSTSSHAPPTQQVLPPQGYMQPPQQIQVSYYPP 523
Q QQ +M Q P S P +Q V PP+G + P Q ++
Sbjct: 1025 -----QQQQQQQQMMMMLMMQQDP-----KSVRLPVSQNVHPPRGPLNPDSQ-RMPMQQS 1073
Query: 524 GQYPNSNQQYRPLSHPVAYSPQRGQQLPQPSQQPGLQPMMPNQQQAAYQGMIGVQQPQNQ 583
G P P S P SP + Q++P P P+ N ++ YQ + PQN
Sbjct: 1074 GSVPVMVSLQGPASVPP--SPDK-QRMPMPVN----TPLGSNSRKMVYQ-----ESPQNP 1121
Query: 584 GL-----LSSQRSSMGGQMQGLVVQYTPLPSYQVPVGSDSQNVVQPPFQQPMLVPVSQSV 638
++S + G + + +PS+ V QN + +P P+S +
Sbjct: 1122 SSSPLAEMASLPEASGSEAPSVPGGPNNMPSHVVL----PQNQLMMTGPKPGPSPLS-AT 1176
Query: 639 QGGLPAAGVPVYYSMIPPAQQNGTSPSVGFLQPPGSEQYQMPQSPSPCSP-PQMPQQYSG 697
QG P PP +S F Q P++P+ SP P PQ +
Sbjct: 1177 QGATPQQ---------PPVNSLPSSHGHHFPNVAAPTQTSRPKTPNRASPRPYYPQTPNN 1227
Query: 698 VSPSG----------------PGVVVMQLNVPNGPQPPQNPSMVQWSHCKYYSMDQRGQK 741
PS G+ Q+N+P P+P N DQ+G
Sbjct: 1228 RPPSTEPSEISLSPERLNASIAGLFPPQINIPLPPRPNLN-----------RGFDQQGLN 1276
Query: 742 PGDLYSPDSSPQANTQMSSSPVTSPTQSPAPSPVTS 777
P L + +P +N M+ S +P S V +
Sbjct: 1277 PTTLKAIGQAP-SNLTMNPSNFATPQTHKLDSVVVN 1311
Score = 46.6 bits (109), Expect = 1e-04
Identities = 84/353 (23%), Positives = 123/353 (34%), Gaps = 34/353 (9%)
Query: 443 GQMSLSRQGSTEAADPSAALFQTPLISQHPQQTSFIMASTGQP-LPTSNYSTS-SHAPPT 500
GQ + Q + + + Q L+ H + ++G P + SN PP+
Sbjct: 560 GQGAGPPQNQMQVSHGPPNMMQPSLMGIHGNMNNQQAGTSGVPQVNLSNMQGQPQQGPPS 619
Query: 501 Q------QVLPPQGYMQPPQQIQVSYYP-----PGQYPNSNQQYRPLSHPVAYSPQRGQQ 549
Q Q++P QG M Q P P P S + SPQR
Sbjct: 620 QLMGMHQQIVPSQGQMVQQQGTLNPQNPMILSRAQLMPQGQMMVNPPSQNLGPSPQRMTP 679
Query: 550 LPQPSQQPGLQPMMPNQQQAAYQGMIGVQQ-PQNQGLLSSQRSSMGGQMQGLVVQYTPLP 608
Q Q G Q M P+ Q QG + +QQ P + ++++ QMQG Q+
Sbjct: 680 PKQMLSQQGPQMMAPHNQMMGPQGQVLLQQNPMIEQIMTN-------QMQGNKQQFNTQN 732
Query: 609 SYQVPVGSDSQNVVQPPFQQPMLVPVSQSVQGGLPAAGVPVYYSMIPPAQQNGTSPSVGF 668
V G P Q +V + + G + PV S P+Q G V
Sbjct: 733 QSNVMPGPAQIMRGPTPNMQGNMVQFTGQMSGQMLPQQGPVNNS---PSQVMGIQGQV-- 787
Query: 669 LQPPGSEQYQMPQSPSPCSPPQMPQQYSGVSPSGPGVVVMQLN-VPNGPQPPQNPSMVQW 727
L+PPG + Q P + S + P V + Q N VP Q Q S
Sbjct: 788 LRPPGPSPHMAQQHGDPATTANNDVSLSQMMPD---VSIQQTNMVPPHVQAMQGNS-ASG 843
Query: 728 SHCKYYSMDQRGQKPGDLYSPDSSPQANTQMSSSPVTSPTQSPAPSPVTSLSS 780
+H + M G +P+ + + Q PV +P V L S
Sbjct: 844 NHFSGHGMSFNAPFSG---APNGNQMSCGQNPGFPVNKDVTLTSPLLVNLLQS 893
Score = 37.4 bits (85), Expect = 0.069
Identities = 65/277 (23%), Positives = 102/277 (36%), Gaps = 41/277 (14%)
Query: 616 SDSQNVVQPPFQQPMLVPVSQSVQ-------GGLPAAGVPVYYSMIPPAQQNGTSPSVGF 668
S +Q+ +P F P+ + S +Q +PAA + ++PP+ VG
Sbjct: 1645 SAAQSNARPQFITPVFINSSSIIQVMKGSQPSTIPAAPLTTNSGLMPPSVA-----VVGP 1699
Query: 669 LQPPGSEQYQM-PQSPSPCSPPQMPQQYSGVSPSGPGVVVMQLNVPNGPQPPQNPSMVQW 727
L P + ++ P P+ S P +G P V+ + P PP S V
Sbjct: 1700 LHIPQNIKFSSAPVPPNALSSSPAPNIQTG----RPLVLSSRATPVQLPSPPCTSSPVVP 1755
Query: 728 SHCKYYSMDQRGQKPGDLYSPDSSPQANTQMSSSPVTSPTQSPAPSPVTSLSSVCTGLSP 787
SH Q+ +L ++SPQ NT + + S + SP+ + S +G
Sbjct: 1756 SHPPV-------QQVKELNPDEASPQVNTSADQNTLPSSQSTTMVSPLLTNSPGSSGNRR 1808
Query: 788 LPVLTQFPRPGGPAQGDGRYSLLGQPLQYNL--SICPPLLHGQSTY-----TVHQGQSGL 840
PV ++G G+ +GQ L + L G+ Y T QG
Sbjct: 1809 SPV--------SSSKGKGKVDKIGQILLTKACKKVTGSLEKGEEQYGADGETEGQGLDTT 1860
Query: 841 KHGNRGKRQALKSASTDLGTADVVLGRVLEVTDLPEG 877
G G Q S D T +L++T P G
Sbjct: 1861 APGLMGTEQL--STELDSKTPTPPAPTLLKMTSSPVG 1895
Score = 33.1 bits (74), Expect = 1.3
Identities = 46/177 (25%), Positives = 58/177 (32%), Gaps = 30/177 (16%)
Query: 629 PMLVPVSQSVQGGLPAAGVPVYYSM-------IPPAQQNGTSPSVGFLQPPGSEQYQMPQ 681
PM S ++ G P A P M IPP +S + PG P+
Sbjct: 152 PMGAGNSVRMEAGFPMASGPGIIRMNNPATVMIPPGGNVSSS-----MMAPGPNPELQPR 206
Query: 682 SPSPCSPPQ-MPQQYSGVS------PSG----------PGVVVMQLNVPNGPQPPQNPSM 724
+P P S M SG+ PSG P V Q+N N PQ Q
Sbjct: 207 TPRPASQSDAMDPLLSGLHIQQQSHPSGSLAPPHHPMQPVSVNRQMNPANFPQLQQQQQQ 266
Query: 725 VQWSHCKYYSMDQRGQKPGDLYSPDSSPQANTQMSSSP-VTSPTQSPAPSPVTSLSS 780
Q + Q+ Q+ P Q P T+PTQ P P L S
Sbjct: 267 QQQQQQQQQQQQQQQQQQQLQARPPQQHQQQQPQGIRPQFTAPTQVPVPPGWNQLPS 323
Score = 32.3 bits (72), Expect = 2.2
Identities = 68/296 (22%), Positives = 104/296 (35%), Gaps = 25/296 (8%)
Query: 443 GQMSLSRQGSTEAADPSAALFQTPLISQHPQQTSFIMASTGQPLPTSNYSTSSHA-PPTQ 501
G + +G + A + F TP+ + S +P + +T+S PP+
Sbjct: 1635 GSKVMVSEGQSAAQSNARPQFITPVFINSSSIIQVMKGSQPSTIPAAPLTTNSGLMPPSV 1694
Query: 502 QVLPPQGYMQPPQQIQVSY--YPPGQYPNSNQQYRPLSHPVAYSPQRGQ-QLPQP----- 553
V+ P + PQ I+ S PP +S P+ S + QLP P
Sbjct: 1695 AVVGP---LHIPQNIKFSSAPVPPNALSSSPAPNIQTGRPLVLSSRATPVQLPSPPCTSS 1751
Query: 554 ----SQQPGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSSQRSSMGGQMQGLVVQYTPLPS 609
S P Q N +A+ Q + QN L SSQ ++M + L +
Sbjct: 1752 PVVPSHPPVQQVKELNPDEASPQ--VNTSADQNT-LPSSQSTTMVSPL--LTNSPGSSGN 1806
Query: 610 YQVPVGSDSQNVVQPPFQQPMLVPVSQSVQGGLPAAGVPVYYSMIPPAQQNGTSPSVGFL 669
+ PV S Q +L + V G L G Y + Q + + G +
Sbjct: 1807 RRSPVSSSKGKGKVDKIGQILLTKACKKVTGSLEK-GEEQYGADGETEGQGLDTTAPGLM 1865
Query: 670 QPPGSEQYQMPQSPSPCSPPQMPQQYSGVSPSGPGVVVMQLNVPNGPQPPQNPSMV 725
G+EQ +PP SP GPG ++P G P S+V
Sbjct: 1866 ---GTEQLSTELDSKTPTPPAPTLLKMTSSPVGPGTASAGPSLPGGALPTSVRSIV 1918
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 [Homo
sapiens]
Length = 2231
Score = 62.8 bits (151), Expect = 2e-09
Identities = 122/546 (22%), Positives = 191/546 (34%), Gaps = 59/546 (10%)
Query: 273 QNGYLNDIRLSKEAFSSSSHKRRQIFRGNREGLSRTSSSRQSSTDSELKSLEPRPW---- 328
Q Y +S+E + + S + N E L+ R SS S++ P
Sbjct: 564 QQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEA 623
Query: 329 ---SSTDSDGSVRSMRPPVTKASS-FSG-----ISILTRGDS---IGSSKGGSAGRISRP 376
S+ + GS S A S FS +S + G S +GS G + R S P
Sbjct: 624 TLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSR-SGP 682
Query: 377 GMALGAP--EVCNQVTSSQSVRGLLPCTAQQQQQQQQQQLPALPPTPQQQPPLNNHMISQ 434
P ++ Q SQS P +Q Q++ + PQ
Sbjct: 683 ISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPS 742
Query: 435 ADDLSNPFGQMSLSRQGSTEAADPSAALFQTPLISQHPQQTSFIMASTGQPLPTSNYSTS 494
+P GQM G + +++ P +SQ+ Q ++ +P+++YS
Sbjct: 743 MSPHPSPGGQM---HAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYS-- 797
Query: 495 SHAPPTQQVLPPQGYMQPPQQIQVSYYPPGQYPNSNQQYRP----LSHPVAYSPQRGQQL 550
P Q + Q P Q P G+ P++ Q RP +S SP QQ
Sbjct: 798 GPGPGMGISANNQMHGQGPSQ-PCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQ- 855
Query: 551 PQPSQQPGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSSQRSSMGGQMQGLVVQYTPLPSY 610
PG+ P MP + A + V Q S Q S G GL+ +P Y
Sbjct: 856 ----GGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSP---Y 908
Query: 611 QVPVGSDS--QNVVQPPFQQPMLVPVSQSVQGGLPAAGVPVYYSMIPPAQQNGTSPSVGF 668
P+ + S N PP+ + S + GL P + P + +G
Sbjct: 909 SQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGLADMMSPGESKLPLPLKADGKEEGTPQ 968
Query: 669 LQPPGSEQYQMPQSPSPCSPPQMPQQYSGVSPSGPGVVVM------QLNVPNGPQPPQNP 722
+ + Y P +P +P S +SPS + ++ P P+ P +P
Sbjct: 969 PESKSKDSYSSQGISQPPTPGNLPVP-SPMSPSSASISSFHGDESDSISSPGWPKTPSSP 1027
Query: 723 SMVQWSHCKYYSMDQRGQKPGDLYSPDSSPQANTQMSSSPVTSPTQSPAPSPVTSLSSVC 782
K S G+K +Y + P+ + + SPV+SL +V
Sbjct: 1028 --------KSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFMEERG---SPVSSLPAV- 1075
Query: 783 TGLSPL 788
G PL
Sbjct: 1076 -GKKPL 1080
Score = 59.7 bits (143), Expect = 1e-08
Identities = 132/552 (23%), Positives = 177/552 (32%), Gaps = 103/552 (18%)
Query: 363 GSSKGGS---AGRISRPGMALGAPEVCNQVTSSQSVRGLLPCTAQQQQQQQQQQLPALPP 419
GS+ GG AG+ P GA NQ+ +S S P + P+ PP
Sbjct: 338 GSAAGGFQRFAGQNQHPS---GATPTLNQLLTSPS-----PMMRSYGGSYPEYSSPSAPP 389
Query: 420 TPQQQPPLNNHMISQADDLSNPFGQMSLSRQGSTE--AADPSAALFQT------------ 465
P QP A M L + + AA P+ A Q
Sbjct: 390 PPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPG 449
Query: 466 ------------PLISQHPQQTSFIMASTGQPLPTSNYSTSSHAPPTQQVLP-------- 505
P++ + PQ QP +S Y S+ PP Q P
Sbjct: 450 PTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTP 509
Query: 506 --------PQGYMQPP--QQIQVSYYPPGQYPNSNQQYRP--LSHPVAYSPQRGQQLPQP 553
PQ M P QQ Y GQ P +QQ +P L Y P + QQ QP
Sbjct: 510 GAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQP 569
Query: 554 SQ-----------QPGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSSQRSSMGGQMQGLVV 602
Q QP L P PN + +I ++P + LS + + +
Sbjct: 570 QQDMSQEGYGTRSQPPLAPGKPNHEDL---NLIQQERPSSLPDLSGSIDDLPTGTEATLS 626
Query: 603 QYTPLPSYQVPVGSDSQNVVQPPFQQPMLVPVSQSVQGGLPAA--GVPVYYSM-----IP 655
G D N Q PF P P S+ GG + G PV + I
Sbjct: 627 SAVSASGSTSSQG-DQSNPAQSPF-SPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPIS 684
Query: 656 PAQQNGTSPSVGFLQPPGSEQYQMPQSPSPCSPPQMPQQYSGVSPSGPGVVVMQLN-VPN 714
PA G+ QPPGS+ SP MPQ+ ++ + + Q
Sbjct: 685 PASIPGSQMPP---QPPGSQSESSSHPALSQSP--MPQERGFMAGTQRNPQMAQYGPQQT 739
Query: 715 GPQPPQNPSMVQWSHCKYYSMDQRGQKPGDLYSPDSS---PQANTQMSSSPVTSPTQS-- 769
GP +PS H S Q Y P S PQ N + P+ S
Sbjct: 740 GPSMSPHPSPGGQMHAGISSFQQ--SNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYS 797
Query: 770 -PAPSPVTSLSSVCTGLSPLPVLTQFPRPGGPAQGDGRYSLLGQPLQYNLSICPPLLHGQ 828
P P S ++ G P P P+ G + +P N+S P G
Sbjct: 798 GPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAG-----MQNRPFPGNMSSMTPSSPGM 852
Query: 829 STYTVHQGQSGL 840
S QG G+
Sbjct: 853 S----QQGGPGM 860
Score = 40.0 bits (92), Expect = 0.011
Identities = 96/408 (23%), Positives = 148/408 (36%), Gaps = 47/408 (11%)
Query: 391 SSQSVRGLLPCTAQQQQQQQQQQLPA--LPPTPQQQP-----PLNNHMISQADDLSNPFG 443
+S S++G P T Q ++P PPTP P P+ S + +PF
Sbjct: 1167 NSGSLQG--PQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGR-SSTISVHDPFS 1223
Query: 444 QMSLS----RQGSTEAADPSAALFQTPLISQHPQQTSFIMASTGQPLPTSN--YSTSSHA 497
+S S R T A + ++ + P + + + +P S+ + T
Sbjct: 1224 DVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQM 1283
Query: 498 PPTQQV----LPPQGYMQPPQQIQVSYYPPGQYPNSNQQYRPLSHPVAYSPQRGQQLPQP 553
P + P G M Q +P G + + +P P GQ P
Sbjct: 1284 PNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQYP-GQGPPSGQP-PYG 1341
Query: 554 SQQPGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSSQRSSMGGQMQGLVVQYTPLPSYQVP 613
QPGL P PN ++ GM G +++G + + + S Q Q + QY SY P
Sbjct: 1342 GHQPGLYPQQPNYKR-HMDGMYGPPAKRHEGDMYNMQYS--SQQQEMYNQYG--GSYSGP 1396
Query: 614 VGSDSQNVVQPPFQQPMLVPVSQSVQGGLP--AAGVPVYYSMIPPAQQNGTSPSVGFLQP 671
Q P+ + + Q G+P G P+ S QQN + P
Sbjct: 1397 DRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPYP 1456
Query: 672 PGSEQYQMPQSPSPCSPPQMPQQYSGVSPSGPGVVVMQLNVPNGPQPPQNPSMVQWSHCK 731
YQ Q P P Q P Y G++ + ++V + + Q P + S Q
Sbjct: 1457 -----YQNRQGPG--GPTQAP-PYPGMNRT-DDMMVPDQRINHESQWPSHVSQRQPYMSS 1507
Query: 732 YYSMDQRGQKPGDLY-SPDSSPQ--------ANTQMSSSPVTSPTQSP 770
SM + P Y +P S P A+ Q S SP++SP
Sbjct: 1508 SASMQPITRPPQPSYQTPPSLPNHISRAPSPASFQRSLENRMSPSKSP 1555
Score = 35.4 bits (80), Expect = 0.26
Identities = 120/508 (23%), Positives = 159/508 (31%), Gaps = 81/508 (15%)
Query: 404 QQQQQQQQQQLP-------------ALPPTP-QQQPPLNNHMISQADDLSNPFGQMSLSR 449
QQQQQQQQQQ P A P P +QP S A ++P G LS+
Sbjct: 64 QQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSK 123
Query: 450 QGSTEAA-----DPSAALFQTP----LISQHPQQTSFIMASTGQP--LPTSNYSTSSHAP 498
G + A +P+ ++ P L +Q P + G P +P N S AP
Sbjct: 124 PGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVA--VPGGGGGPAAVPEFNNYYGSAAP 181
Query: 499 PTQQVLPPQGYMQPPQQIQVSYYPPGQYPNSNQQYRPLSHPVAYSPQRGQQLPQPSQQPG 558
+ P G P PG + P + P + P+ Q
Sbjct: 182 ASG---GPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCN 238
Query: 559 LQPMMPNQQQAAYQGMIGVQQPQNQGLLSSQRSSMGGQMQGLVVQYTPLPSYQVPVG--- 615
P G G + G + GG G V + G
Sbjct: 239 HYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGG 298
Query: 616 -----SDSQNVVQPPFQQ---PMLVP-----------VSQSVQGGLPA-AGVPVYYS-MI 654
S V+ P QQ M+ P + S GG AG + S
Sbjct: 299 GYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGAT 358
Query: 655 PPAQQNGTSPSVGFLQPPGS-EQYQMPQSPSPCSPPQMPQQYSGVSPSGPG----VVVMQ 709
P Q TSPS GS +Y P +P P PP PQ + + + G M
Sbjct: 359 PTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPP--PPSQPQSQAAAAGAAAGGQQAAAGMG 416
Query: 710 LNVPNGPQ----PPQNPSMVQWSH--------------CKYYSMDQRGQKPGDLYSPDSS 751
L G Q P + Q SH + MD K LY S+
Sbjct: 417 LGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSN 476
Query: 752 PQANTQMSSSPVTSPTQSPAPS--PVTSLSSVCTGLSPLPVLTQFPRPGGPAQGDGRYSL 809
P + Q SS P P P+ ++ + Q P QG Y
Sbjct: 477 PHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQ 536
Query: 810 LGQPLQYNLSICPPLLHGQSTYTVHQGQ 837
GQ Y+ PP L Q+ Y Q Q
Sbjct: 537 QGQQPYYSQQPQPPHLPPQAQYLPSQSQ 564
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 61.6 bits (148), Expect = 3e-09
Identities = 90/380 (23%), Positives = 128/380 (33%), Gaps = 53/380 (13%)
Query: 416 ALPPTPQQQPPLNNHMISQADDLSNPFGQMSLSRQGSTEAADPSAALFQTPLISQHPQQT 475
ALP P PP + +S + Q SL Q P + L + +
Sbjct: 404 ALPSYPHSFPPPTSLSVSNQPP---KYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPG 460
Query: 476 SFIMASTGQPLPTSNYSTSSHAPPTQQVLPPQGYMQPPQQIQVSYY------PPGQYPNS 529
F ++ Q T++ S+H QQ Q Q QQ Q ++ PPG +P+
Sbjct: 461 PFPPSTGAQS--TAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPHP 518
Query: 530 NQQYRPL-SHPVAYSPQRGQQLPQPSQQPGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSS 588
+ +HP A SP G P P PG + P Q +Y P + SS
Sbjct: 519 LEGGSSHHAHPYAMSPSLGSLRPYP---PGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSS 575
Query: 589 QRSSMGGQM----------QGLVVQYTPLPSYQVPVGSDSQ---NVVQPPFQQPMLVPVS 635
+S G QG + P+P+ + S V P P
Sbjct: 576 SSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPG 635
Query: 636 QSVQGG-LPAAGVPVYYSMIPPAQQNGTSPSVGFLQPPGSEQYQMPQSPSPCSPPQMPQQ 694
G P+ G Y + PP + G+ PS PPG P P P
Sbjct: 636 PPPYGKRAPSPGA--YKTATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPGTFKPGSPTVG 693
Query: 695 YSGVSPSGPGVVVMQLNVPNGPQPPQNPSMVQWSHCKYYSMDQRGQKPGDLYSPDSSPQA 754
+ P+GP +P+ P PP P + S Q Q+P + Y SP
Sbjct: 694 PGPLPPAGPS------GLPSLPPPPAAP-----ASGPPLSATQIKQEPAEEYETPESP-- 740
Query: 755 NTQMSSSPVTSPTQSPAPSP 774
P +SP+P P
Sbjct: 741 ---------VPPARSPSPPP 751
Score = 53.1 bits (126), Expect = 1e-06
Identities = 150/685 (21%), Positives = 212/685 (30%), Gaps = 118/685 (17%)
Query: 219 QTGKAVIINKTSNTRIPEQRFSEHIKDE--------KNTEFQQRF--------------- 255
QT K + + S ++ +Q SE I + K T+ +Q
Sbjct: 52 QTAKKARVEEASTPKVNKQGRSEEISESESEETNAPKKTKTEQELPRPQSPSDLDSLDGR 111
Query: 256 ILKRDDASMDRD---DNQTGQNGYLNDIRLSKEAFSSSSHKRRQIFRGNREGLSRTSSSR 312
L D +S RD DN++ + + ++ SSS + + L S
Sbjct: 112 SLNDDGSSDPRDIDQDNRSTSPSIYSPGSVENDSDSSSGLSQGPARPYHPPPLFPPSPQP 171
Query: 313 QSSTDSELK-SLEPRPWSSTDSDGSVRSMRPPVTKASSF-------------SGISILTR 358
ST + + S EP P S G M PP ++ G +
Sbjct: 172 PDSTPRQPEASFEPHP--SVTPTGYHAPMEPPTSRMFQAPPGAPPPHPQLYPGGTGGVLS 229
Query: 359 GDSIGSSKGGSAGRISRPGMALGAPEVCNQVTSSQSVRGLLPCTAQQQQQQQQQQLPALP 418
G +G GG+A + P P ++ S S P T LP+ P
Sbjct: 230 GPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAP 289
Query: 419 P-------TPQQQPP-----LNNHMISQADDLSNPF---------------GQMSLSRQG 451
P TP PP LNN S + P G +G
Sbjct: 290 PPANFPHVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKG 349
Query: 452 STEAADPSAALFQTPLISQHPQQTSFIMASTGQPLPTSNYSTSSHAP---PTQQVLPPQG 508
T A P + + P + + +S+ +S+ S+SS + P Q LP
Sbjct: 350 PTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYP 409
Query: 509 Y-MQPPQQIQVSYYPPGQYPNSNQQYRPLSHPVAYSPQRGQQLPQPSQQPGLQPMMPNQQ 567
+ PP + VS PP S S P G+ L + PG P Q
Sbjct: 410 HSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQ 469
Query: 568 QAAYQGMI----GVQQPQNQGLLSSQRSSMGGQMQGLVVQYTPLPSYQVPVGSDSQNVVQ 623
A+ + QQ Q Q Q+ Q G P ++ P+ S +
Sbjct: 470 STAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGP-PPPGAFPHPLEGGSSHHAH 528
Query: 624 PPFQQPMLVPVSQSVQGGLPAAGVPVYYSMIPPAQQNGTSPSVGFLQPPGSEQYQMPQSP 683
P P L + G A +P +S + +Q P V S Q
Sbjct: 529 PYAMSPSLGSLRPYPPG---PAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPC 585
Query: 684 SPCSPPQMPQQYSGVSPSGPGVVVMQLNV------------------PNGPQPPQNPSMV 725
S SP Q PQ P P V + P GP P +
Sbjct: 586 SHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAP- 644
Query: 726 QWSHCKYYSMDQRGQKPGDLYSPDSSPQANTQMSSSPV-------TSPTQSPAPSPVTSL 778
S Y + G KPG S + + +S P SPT P P P
Sbjct: 645 --SPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGP 702
Query: 779 SSVCTGLSPLPVLTQFPRPGGPAQG 803
S GL LP P P PA G
Sbjct: 703 S----GLPSLP-----PPPAAPASG 718
Score = 44.7 bits (104), Expect = 4e-04
Identities = 64/237 (27%), Positives = 85/237 (35%), Gaps = 50/237 (21%)
Query: 584 GLLSSQRSSMGGQMQGLVVQYTPLPSYQVPVGSDSQNVVQPPFQQPMLVPVSQSVQGGLP 643
G + + S G QG Y P P + PP QP P S Q P
Sbjct: 139 GSVENDSDSSSGLSQGPARPYHPPPLF-------------PPSPQP---PDSTPRQ---P 179
Query: 644 AAGVPVYYSMIPPAQQNGTSPSVGFLQPPGSEQYQMPQSPSPCSPPQMPQQYSGVS---- 699
A + S+ P +P ++PP S +Q P P +PP PQ Y G +
Sbjct: 180 EASFEPHPSVTPTGYH---AP----MEPPTSRMFQAP----PGAPPPHPQLYPGGTGGVL 228
Query: 700 ---PSGP--GVVVMQLNVPNGPQ---PPQNPSMVQWSHCKYYSMDQRGQKP-GDLYSPDS 750
P GP G + PNG + PP P V S + P G P +
Sbjct: 229 SGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSA 288
Query: 751 SPQANTQMSSSPVTSPTQSPAPS--PVTSLSSVCTGLSPLPVLTQFPRPGGPAQGDG 805
P AN P +P P P+ P+ + S+ GL P+ P P QG G
Sbjct: 289 PPPANF-----PHVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMG 340
Score = 44.7 bits (104), Expect = 4e-04
Identities = 86/309 (27%), Positives = 112/309 (36%), Gaps = 51/309 (16%)
Query: 404 QQQQQQQQQQLPALPPTPQQQP-PLNNHMISQADDLSNPFGQMSLSRQGSTEAADPSAAL 462
QQQQQQQQ + PP P P PL A +P+ MS S GS P A
Sbjct: 495 QQQQQQQQHHGNSGPPPPGAFPHPLEGGSSHHA----HPYA-MSPS-LGSLRPYPPGPAH 548
Query: 463 FQTPLISQHPQQTSFIMASTGQPLPTSNYSTSSHAPPTQQVLPPQGYMQPPQQIQVSYYP 522
P H Q + G P+ +S+ S+SS T Q P + P Q Q + YP
Sbjct: 549 LPPP----HSQVSYSQAGPNGPPVSSSSNSSSS----TSQGSYPCSHPSPSQGPQGAPYP 600
Query: 523 PGQYPNSNQQYRPLSHPVA--YSPQRGQQLPQPSQQPGLQPMMPNQQQAAYQGMIGVQQP 580
P LS +A S G + P P P ++A G P
Sbjct: 601 FPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPP------PYGKRAPSPGAYKTATP 654
Query: 581 QNQGLLSSQRSSMGGQMQGLVVQYTPLPSYQVPVGSDSQNVVQPPFQQPMLVPVSQSV-Q 639
S G TP P Y+ PP P S +V
Sbjct: 655 PGYKPGSPPSFRTG----------TP-PGYR---------GTSPPAGPGTFKPGSPTVGP 694
Query: 640 GGLPAAGVPVYYSMIPP--AQQNGTSPSVGFLQPPGSEQYQMPQSP-----SPCSPPQMP 692
G LP AG S+ PP A +G S ++ +E+Y+ P+SP SP PP++
Sbjct: 695 GPLPPAGPSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPESPVPPARSPSPPPKVV 754
Query: 693 QQYSGVSPS 701
S S S
Sbjct: 755 DVPSHASQS 763
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 61.6 bits (148), Expect = 3e-09
Identities = 90/380 (23%), Positives = 128/380 (33%), Gaps = 53/380 (13%)
Query: 416 ALPPTPQQQPPLNNHMISQADDLSNPFGQMSLSRQGSTEAADPSAALFQTPLISQHPQQT 475
ALP P PP + +S + Q SL Q P + L + +
Sbjct: 404 ALPSYPHSFPPPTSLSVSNQPP---KYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPG 460
Query: 476 SFIMASTGQPLPTSNYSTSSHAPPTQQVLPPQGYMQPPQQIQVSYY------PPGQYPNS 529
F ++ Q T++ S+H QQ Q Q QQ Q ++ PPG +P+
Sbjct: 461 PFPPSTGAQS--TAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGAFPHP 518
Query: 530 NQQYRPL-SHPVAYSPQRGQQLPQPSQQPGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSS 588
+ +HP A SP G P P PG + P Q +Y P + SS
Sbjct: 519 LEGGSSHHAHPYAMSPSLGSLRPYP---PGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSS 575
Query: 589 QRSSMGGQM----------QGLVVQYTPLPSYQVPVGSDSQ---NVVQPPFQQPMLVPVS 635
+S G QG + P+P+ + S V P P
Sbjct: 576 SSTSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPG 635
Query: 636 QSVQGG-LPAAGVPVYYSMIPPAQQNGTSPSVGFLQPPGSEQYQMPQSPSPCSPPQMPQQ 694
G P+ G Y + PP + G+ PS PPG P P P
Sbjct: 636 PPPYGKRAPSPGA--YKTATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPGTFKPGSPTVG 693
Query: 695 YSGVSPSGPGVVVMQLNVPNGPQPPQNPSMVQWSHCKYYSMDQRGQKPGDLYSPDSSPQA 754
+ P+GP +P+ P PP P + S Q Q+P + Y SP
Sbjct: 694 PGPLPPAGPS------GLPSLPPPPAAP-----ASGPPLSATQIKQEPAEEYETPESP-- 740
Query: 755 NTQMSSSPVTSPTQSPAPSP 774
P +SP+P P
Sbjct: 741 ---------VPPARSPSPPP 751
Score = 53.1 bits (126), Expect = 1e-06
Identities = 150/685 (21%), Positives = 212/685 (30%), Gaps = 118/685 (17%)
Query: 219 QTGKAVIINKTSNTRIPEQRFSEHIKDE--------KNTEFQQRF--------------- 255
QT K + + S ++ +Q SE I + K T+ +Q
Sbjct: 52 QTAKKARVEEASTPKVNKQGRSEEISESESEETNAPKKTKTEQELPRPQSPSDLDSLDGR 111
Query: 256 ILKRDDASMDRD---DNQTGQNGYLNDIRLSKEAFSSSSHKRRQIFRGNREGLSRTSSSR 312
L D +S RD DN++ + + ++ SSS + + L S
Sbjct: 112 SLNDDGSSDPRDIDQDNRSTSPSIYSPGSVENDSDSSSGLSQGPARPYHPPPLFPPSPQP 171
Query: 313 QSSTDSELK-SLEPRPWSSTDSDGSVRSMRPPVTKASSF-------------SGISILTR 358
ST + + S EP P S G M PP ++ G +
Sbjct: 172 PDSTPRQPEASFEPHP--SVTPTGYHAPMEPPTSRMFQAPPGAPPPHPQLYPGGTGGVLS 229
Query: 359 GDSIGSSKGGSAGRISRPGMALGAPEVCNQVTSSQSVRGLLPCTAQQQQQQQQQQLPALP 418
G +G GG+A + P P ++ S S P T LP+ P
Sbjct: 230 GPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAP 289
Query: 419 P-------TPQQQPP-----LNNHMISQADDLSNPF---------------GQMSLSRQG 451
P TP PP LNN S + P G +G
Sbjct: 290 PPANFPHVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKG 349
Query: 452 STEAADPSAALFQTPLISQHPQQTSFIMASTGQPLPTSNYSTSSHAP---PTQQVLPPQG 508
T A P + + P + + +S+ +S+ S+SS + P Q LP
Sbjct: 350 PTLAPSPHSLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSASPFPASQALPSYP 409
Query: 509 Y-MQPPQQIQVSYYPPGQYPNSNQQYRPLSHPVAYSPQRGQQLPQPSQQPGLQPMMPNQQ 567
+ PP + VS PP S S P G+ L + PG P Q
Sbjct: 410 HSFPPPTSLSVSNQPPKYTQPSLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQ 469
Query: 568 QAAYQGMI----GVQQPQNQGLLSSQRSSMGGQMQGLVVQYTPLPSYQVPVGSDSQNVVQ 623
A+ + QQ Q Q Q+ Q G P ++ P+ S +
Sbjct: 470 STAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGP-PPPGAFPHPLEGGSSHHAH 528
Query: 624 PPFQQPMLVPVSQSVQGGLPAAGVPVYYSMIPPAQQNGTSPSVGFLQPPGSEQYQMPQSP 683
P P L + G A +P +S + +Q P V S Q
Sbjct: 529 PYAMSPSLGSLRPYPPG---PAHLPPPHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPC 585
Query: 684 SPCSPPQMPQQYSGVSPSGPGVVVMQLNV------------------PNGPQPPQNPSMV 725
S SP Q PQ P P V + P GP P +
Sbjct: 586 SHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPPPYGKRAP- 644
Query: 726 QWSHCKYYSMDQRGQKPGDLYSPDSSPQANTQMSSSPV-------TSPTQSPAPSPVTSL 778
S Y + G KPG S + + +S P SPT P P P
Sbjct: 645 --SPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGP 702
Query: 779 SSVCTGLSPLPVLTQFPRPGGPAQG 803
S GL LP P P PA G
Sbjct: 703 S----GLPSLP-----PPPAAPASG 718
Score = 44.7 bits (104), Expect = 4e-04
Identities = 64/237 (27%), Positives = 85/237 (35%), Gaps = 50/237 (21%)
Query: 584 GLLSSQRSSMGGQMQGLVVQYTPLPSYQVPVGSDSQNVVQPPFQQPMLVPVSQSVQGGLP 643
G + + S G QG Y P P + PP QP P S Q P
Sbjct: 139 GSVENDSDSSSGLSQGPARPYHPPPLF-------------PPSPQP---PDSTPRQ---P 179
Query: 644 AAGVPVYYSMIPPAQQNGTSPSVGFLQPPGSEQYQMPQSPSPCSPPQMPQQYSGVS---- 699
A + S+ P +P ++PP S +Q P P +PP PQ Y G +
Sbjct: 180 EASFEPHPSVTPTGYH---AP----MEPPTSRMFQAP----PGAPPPHPQLYPGGTGGVL 228
Query: 700 ---PSGP--GVVVMQLNVPNGPQ---PPQNPSMVQWSHCKYYSMDQRGQKP-GDLYSPDS 750
P GP G + PNG + PP P V S + P G P +
Sbjct: 229 SGPPMGPKGGGAASSVGGPNGGKQHPPPTTPISVSSSGASGAPPTKPPTTPVGGGNLPSA 288
Query: 751 SPQANTQMSSSPVTSPTQSPAPS--PVTSLSSVCTGLSPLPVLTQFPRPGGPAQGDG 805
P AN P +P P P+ P+ + S+ GL P+ P P QG G
Sbjct: 289 PPPANF-----PHVTPNLPPPPALRPLNNASASPPGLGAQPLPGHLPSPHAMGQGMG 340
Score = 44.7 bits (104), Expect = 4e-04
Identities = 86/309 (27%), Positives = 112/309 (36%), Gaps = 51/309 (16%)
Query: 404 QQQQQQQQQQLPALPPTPQQQP-PLNNHMISQADDLSNPFGQMSLSRQGSTEAADPSAAL 462
QQQQQQQQ + PP P P PL A +P+ MS S GS P A
Sbjct: 495 QQQQQQQQHHGNSGPPPPGAFPHPLEGGSSHHA----HPYA-MSPS-LGSLRPYPPGPAH 548
Query: 463 FQTPLISQHPQQTSFIMASTGQPLPTSNYSTSSHAPPTQQVLPPQGYMQPPQQIQVSYYP 522
P H Q + G P+ +S+ S+SS T Q P + P Q Q + YP
Sbjct: 549 LPPP----HSQVSYSQAGPNGPPVSSSSNSSSS----TSQGSYPCSHPSPSQGPQGAPYP 600
Query: 523 PGQYPNSNQQYRPLSHPVA--YSPQRGQQLPQPSQQPGLQPMMPNQQQAAYQGMIGVQQP 580
P LS +A S G + P P P ++A G P
Sbjct: 601 FPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGPP------PYGKRAPSPGAYKTATP 654
Query: 581 QNQGLLSSQRSSMGGQMQGLVVQYTPLPSYQVPVGSDSQNVVQPPFQQPMLVPVSQSV-Q 639
S G TP P Y+ PP P S +V
Sbjct: 655 PGYKPGSPPSFRTG----------TP-PGYR---------GTSPPAGPGTFKPGSPTVGP 694
Query: 640 GGLPAAGVPVYYSMIPP--AQQNGTSPSVGFLQPPGSEQYQMPQSP-----SPCSPPQMP 692
G LP AG S+ PP A +G S ++ +E+Y+ P+SP SP PP++
Sbjct: 695 GPLPPAGPSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPESPVPPARSPSPPPKVV 754
Query: 693 QQYSGVSPS 701
S S S
Sbjct: 755 DVPSHASQS 763
>gi|50345997 E1A binding protein p300 [Homo sapiens]
Length = 2414
Score = 61.2 bits (147), Expect = 4e-09
Identities = 107/419 (25%), Positives = 157/419 (37%), Gaps = 77/419 (18%)
Query: 375 RPGMALGAPEVCNQVTSSQSVRGLLP------CTAQQQQQQQQQQLPALPP-TPQQQPPL 427
+PGM P + +RG +P T Q Q Q A PP P+Q PPL
Sbjct: 679 QPGMTSNGP-----LPDPSMIRGSVPNQMMPRITPQSGLNQFGQMSMAQPPIVPRQTPPL 733
Query: 428 NNH-MISQADDLSNPFGQMSLSRQGSTEAADPSAALFQTPLISQHPQQTSFIMA-STGQP 485
+H ++Q L+ P G +Q S + L QT SQ T+ +A S+GQ
Sbjct: 734 QHHGQLAQPGALNPPMGYGPRMQQPSNQ----GQFLPQTQFPSQGMNVTNIPLAPSSGQA 789
Query: 486 LPTSNYSTSSHAPPTQQVLPP--QG-YMQPPQQIQVSYYPPGQYPNSNQQYRPLSHPVAY 542
+ +SS P ++PP QG ++ PQ Q + + P ++ P P
Sbjct: 790 PVSQAQMSSSSCPVNSPIMPPGSQGSHIHCPQLPQPALHQNSPSPVPSRTPTPHHTP--- 846
Query: 543 SPQRGQQLPQPSQQPGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSSQRSSMGGQMQGLVV 602
P G Q P + P P P PQ+Q L R +
Sbjct: 847 -PSIGAQQPPATTIPAPVPTPPAMPPG----------PQSQALHPPPRQTP--------- 886
Query: 603 QYTPLPSYQVPVGSDSQNVVQPPFQQPMLVPVS-QSVQGGLPAAGVPVYYSMIPPAQQNG 661
TP P+ Q+P P QP P S QS +P P ++PP
Sbjct: 887 --TP-PTTQLPQQVQPSLPAAPSADQPQQQPRSQQSTAASVPTPTAP----LLPP----- 934
Query: 662 TSPSVGFLQPPGSEQYQMPQSPSPCSPPQMPQQYSGVSPSGPGVVVMQLNVPNGPQP--- 718
P+ QP S + Q+ PS S Q + PS + ++ V + P+P
Sbjct: 935 -QPATPLSQPAVSIEGQVSNPPSTSSTEVNSQAIAEKQPSQEVKMEAKMEV-DQPEPADT 992
Query: 719 -PQNPSMVQWSHCKYYSMDQRGQKPGDLYSPDSSPQANTQM---SSSPVTSPTQ-SPAP 772
P++ S + CK S + + + S + T++ P TS TQ SPAP
Sbjct: 993 QPEDISESKVEDCKMESTE----------TEERSTELKTEIKEEEDQPSTSATQSSPAP 1041
Score = 55.5 bits (132), Expect = 2e-07
Identities = 117/483 (24%), Positives = 159/483 (32%), Gaps = 94/483 (19%)
Query: 388 QVTSSQSVRGLLPCT-AQQQQQQQQQQLPALPPTPQQ--QPPLNNHMISQADDLSNPFGQ 444
Q T S+ LP T A Q + PPTP Q QPPL + +
Sbjct: 1876 QPTPPNSMPPYLPRTQAAGPVSQGKAAGQVTPPTPPQTAQPPLPGPPPAAVEMA------ 1929
Query: 445 MSLSRQGSTEAADPSAALFQTPLISQHPQQTSFIMASTGQPLPTSNYSTSSHAPPTQQVL 504
M + R T+ +FQ P+ Q P T MA G P S H P +
Sbjct: 1930 MQIQRAAETQRQMAHVQIFQRPIQHQMPPMTP--MAPMGMNPPPMTRGPSGHLEPG---M 1984
Query: 505 PPQGYMQPPQQIQVSYYPPGQYPNSNQQYRPLSHPVAYSPQRGQQLPQPSQ-QPGLQPMM 563
P G Q P Q P Q + RP VA Q PQP Q G+ P+
Sbjct: 1985 GPTGMQQQPPWSQGGLPQPQQLQSGMP--RPAMMSVAQHGQPLNMAPQPGLGQVGISPLK 2042
Query: 564 PNQ-QQAAYQGMIG--------VQQPQNQGLLSSQRSSMGGQMQGLVVQYTPLPSYQVPV 614
P Q A Q ++ +QQ Q +L + + ++ +Y +P
Sbjct: 2043 PGTVSQQALQNLLRTLRSPSSPLQQQQVLSILHANPQLLAAFIKQRAAKYANSNPQPIP- 2101
Query: 615 GSDSQNVVQPPFQQPMLV--------PVSQSV---QGGLPAAGVPVYYSMIPPAQQNGTS 663
G QP Q P + P Q++ Q G+ AG+P P QQ
Sbjct: 2102 GQPGMPQGQPGLQPPTMPGQQGVHSNPAMQNMNPMQAGVQRAGLPQQQ----PQQQ--LQ 2155
Query: 664 PSVGFLQPPGSEQYQMPQSPSPCS--------PPQMPQQYSGVSPS-GPGVVVM-QLNVP 713
P +G + P ++Q M + P QQ G P GPG+ Q P
Sbjct: 2156 PPMGGMSPQ-AQQMNMNHNTMPSQFRDILRRQQMMQQQQQQGAGPGIGPGMANHNQFQQP 2214
Query: 714 NGP-QPPQNPSMVQ--WSHCKYYSMDQRGQKPGDL------------------------- 745
G PPQ +Q + +M Q GQ P L
Sbjct: 2215 QGVGYPPQQQQRMQHHMQQMQQGNMGQIGQLPQALGAEAGASLQAYQQRLLQQQMGSPVQ 2274
Query: 746 ---YSPDS--------SPQANTQMSSSPVTSPTQSPAPSPVTSLSSVCTGLSPLPVLTQF 794
SP SP Q + +++ +SP P P S SP P +
Sbjct: 2275 PNPMSPQQHMLPNQAQSPHLQGQQIPNSLSNQVRSPQPVPSPRPQSQPPHSSPSPRMQPQ 2334
Query: 795 PRP 797
P P
Sbjct: 2335 PSP 2337
Score = 55.1 bits (131), Expect = 3e-07
Identities = 81/279 (29%), Positives = 106/279 (37%), Gaps = 50/279 (17%)
Query: 524 GQYPNSNQQYRPLSHPVAYSPQRGQQ-LPQPSQQPGLQPMMPNQQQAAYQGMIG------ 576
G PN Q P P + Q GQ + QP P P + + Q A G +
Sbjct: 696 GSVPN---QMMPRITPQSGLNQFGQMSMAQPPIVPRQTPPLQHHGQLAQPGALNPPMGYG 752
Query: 577 --VQQPQNQGLLSSQRSSMGGQMQGLVVQYTPLP--SYQVPVGSDSQNVVQPPFQQPMLV 632
+QQP NQG Q QG+ V PL S Q PV + P P++
Sbjct: 753 PRMQQPSNQGQFLPQTQFPS---QGMNVTNIPLAPSSGQAPVSQAQMSSSSCPVNSPIMP 809
Query: 633 PVSQSVQGGLPAAGVPVYYSMIP---PAQQ---NGTSPSVGFLQPPGSEQYQMPQSPSPC 686
P SQ P P + P P++ + T PS+G QPP + +P +P P
Sbjct: 810 PGSQGSHIHCPQLPQPALHQNSPSPVPSRTPTPHHTPPSIGAQQPPAT---TIP-APVP- 864
Query: 687 SPPQMPQQYSGVSPSGPGVVVMQLNVP--NGPQPP--QNPSMVQWSHCKYYSMDQRGQKP 742
+PP MP PG L+ P P PP Q P VQ S S DQ Q+P
Sbjct: 865 TPPAMP----------PGPQSQALHPPPRQTPTPPTTQLPQQVQPSLPAAPSADQPQQQP 914
Query: 743 GDLYSPDSSPQANTQMSSSPVTSPTQSPAPSPVTSLSSV 781
Q +T S T+P P P+ S +V
Sbjct: 915 --------RSQQSTAASVPTPTAPLLPPQPATPLSQPAV 945
Score = 50.4 bits (119), Expect = 8e-06
Identities = 104/399 (26%), Positives = 138/399 (34%), Gaps = 71/399 (17%)
Query: 404 QQQQQQQQQQLPALPPTPQQQPPLNNHMISQADDLSNPFGQMSLS--RQG--STEAADPS 459
Q QQ Q PA+ Q PLN M Q GQ+ +S + G S +A
Sbjct: 2002 QPQQLQSGMPRPAMMSVAQHGQPLN--MAPQPG-----LGQVGISPLKPGTVSQQALQNL 2054
Query: 460 AALFQTPLISQHPQQTSFIMASTGQPLPT------SNYSTSSHAPPTQQVLPPQGY--MQ 511
++P QQ I+ + Q L + Y+ S+ P Q PQG +Q
Sbjct: 2055 LRTLRSPSSPLQQQQVLSILHANPQLLAAFIKQRAAKYANSNPQPIPGQPGMPQGQPGLQ 2114
Query: 512 PPQQIQVSYYPPGQYPNSNQQYRPLSHPVAYSPQRG---QQLPQPSQQPGLQPMMPNQQQ 568
PP PGQ + +P+ QR QQ PQ QP + M P QQ
Sbjct: 2115 PPTM-------PGQQGVHSNPAMQNMNPMQAGVQRAGLPQQQPQQQLQPPMGGMSPQAQQ 2167
Query: 569 AAYQGMIGVQQPQNQGLLSSQRSSMGGQMQGLVVQYTPLPS----YQVPVGSDSQNVVQP 624
Q + +L Q+ Q QG P + +Q P Q V P
Sbjct: 2168 MNMNH--NTMPSQFRDILRRQQMMQQQQQQGAGPGIGPGMANHNQFQQP-----QGVGYP 2220
Query: 625 PFQQP-MLVPVSQSVQGGLPAAGVPVYYSMIPPAQQNGTSPSV-GFLQPPGSEQYQMPQS 682
P QQ M + Q QG + G +P A S+ + Q +Q P
Sbjct: 2221 PQQQQRMQHHMQQMQQGNMGQIG------QLPQALGAEAGASLQAYQQRLLQQQMGSPVQ 2274
Query: 683 PSPCSPPQ--MPQQYSGVSPSGPGVVVMQLNVPNGPQPPQNPSMVQWSHCKYYSMDQRGQ 740
P+P SP Q +P Q G + N PQP +P R Q
Sbjct: 2275 PNPMSPQQHMLPNQAQSPHLQGQQIPNSLSNQVRSPQPVPSP---------------RPQ 2319
Query: 741 KPGDLYSPDSSPQANTQMSSSP--VTSPTQSPAPSPVTS 777
P SSP Q SP V+ T SP P V +
Sbjct: 2320 SQ----PPHSSPSPRMQPQPSPHHVSPQTSSPHPGLVAA 2354
Score = 47.4 bits (111), Expect = 7e-05
Identities = 102/387 (26%), Positives = 140/387 (36%), Gaps = 69/387 (17%)
Query: 398 LLPCTAQQQQQQQQQQLPALPPTPQQQPPLNNHMISQADDLSNPFGQMSLSRQGSTEAAD 457
L P T QQ Q + P +P QQ + + + + NP + +Q + + A+
Sbjct: 2041 LKPGTVSQQALQNLLRTLRSPSSPLQQQQVLSILHA------NPQLLAAFIKQRAAKYAN 2094
Query: 458 PSAALFQTPLISQHPQQTSFIMASTGQPLPTSNYSTSSHAPPTQQVLPP-QGYMQ----P 512
+ P+ P Q G PT H+ P Q + P Q +Q P
Sbjct: 2095 SNPQ----PI----PGQPGMPQGQPGLQPPTMPGQQGVHSNPAMQNMNPMQAGVQRAGLP 2146
Query: 513 PQQIQVSYYPPGQYPNSNQQYRPLSHPVAYSPQRG----QQLPQPSQQ----PGLQPMMP 564
QQ Q PP + Q ++H S R QQ+ Q QQ PG+ P M
Sbjct: 2147 QQQPQQQLQPPMGGMSPQAQQMNMNHNTMPSQFRDILRRQQMMQQQQQQGAGPGIGPGMA 2206
Query: 565 NQQQAAYQGMIGVQQPQNQGLLSSQRSSMGGQM----QGLVVQYTPLP-SYQVPVGSDSQ 619
N Q QQPQ G Q+ M M QG + Q LP + G+ Q
Sbjct: 2207 NHNQ--------FQQPQGVGYPPQQQQRMQHHMQQMQQGNMGQIGQLPQALGAEAGASLQ 2258
Query: 620 NVVQPPFQQPMLVPVSQSVQGGLPAAGVPVYYSMIPPAQQNGTSPSVGFLQPPG--SEQY 677
Q QQ M PV P P + + AQ SP + Q P S Q
Sbjct: 2259 AYQQRLLQQQMGSPVQ-------PNPMSPQQHMLPNQAQ----SPHLQGQQIPNSLSNQV 2307
Query: 678 QMPQSPSPCSPPQMPQQYSGVSPSGPGVVVMQLNVPNGPQPPQNPSMVQWS--HCKYYSM 735
+ PQ P P PQ +S SP MQ PQP + Q S H +
Sbjct: 2308 RSPQ-PVPSPRPQSQPPHSSPSPR------MQ------PQPSPHHVSPQTSSPHPGLVAA 2354
Query: 736 DQRGQKPGDLYSPDSSPQANTQMSSSP 762
+ G SPD + +Q++S+P
Sbjct: 2355 QANPMEQGHFASPDQNSML-SQLASNP 2380
Score = 46.6 bits (109), Expect = 1e-04
Identities = 64/236 (27%), Positives = 83/236 (35%), Gaps = 55/236 (23%)
Query: 387 NQVTSSQSVRGLLPCTAQQQQQQQQQQLPALPP----------------TPQQQPPLNNH 430
N T R +L QQQQQQ P + P PQQQ + +H
Sbjct: 2171 NHNTMPSQFRDILRRQQMMQQQQQQGAGPGIGPGMANHNQFQQPQGVGYPPQQQQRMQHH 2230
Query: 431 MISQADDLSNPFGQMSLSRQGSTEAADPSAALFQTPLISQHPQQTSFIMASTGQPLPTSN 490
M GQ+ Q A S +Q L+ Q M S QP P S
Sbjct: 2231 MQQMQQGNMGQIGQLP---QALGAEAGASLQAYQQRLLQQQ-------MGSPVQPNPMS- 2279
Query: 491 YSTSSHAPPTQQVLPPQGYMQPPQQIQVSYYPPGQYPN--SNQQYRPLSHPVAYSPQRGQ 548
P Q +L P Q Q + Q PN SNQ P P SP+
Sbjct: 2280 --------PQQHML--------PNQAQSPHLQGQQIPNSLSNQVRSPQPVP---SPRPQS 2320
Query: 549 QLPQPSQQPGLQPM-----MPNQQQAAYQGMIGVQ-QPQNQG-LLSSQRSSMGGQM 597
Q P S P +QP + Q + + G++ Q P QG S ++SM Q+
Sbjct: 2321 QPPHSSPSPRMQPQPSPHHVSPQTSSPHPGLVAAQANPMEQGHFASPDQNSMLSQL 2376
Score = 45.8 bits (107), Expect = 2e-04
Identities = 111/453 (24%), Positives = 149/453 (32%), Gaps = 99/453 (21%)
Query: 406 QQQQQQQQLPALPPTP---------------QQQPPLNNHM------------ISQ---A 435
QQQ PA P TP Q QP N M +SQ A
Sbjct: 1843 QQQGLPSPTPATPTTPTGQQPTTPQTPQPTSQPQPTPPNSMPPYLPRTQAAGPVSQGKAA 1902
Query: 436 DDLSNPFG------------------QMSLSRQGSTEAADPSAALFQTPLISQHPQQTSF 477
++ P M + R T+ +FQ P+ Q P T
Sbjct: 1903 GQVTPPTPPQTAQPPLPGPPPAAVEMAMQIQRAAETQRQMAHVQIFQRPIQHQMPPMTP- 1961
Query: 478 IMASTGQPLPTSNYSTSSHAPPTQQVLPPQGYMQPPQQIQVSYYPPGQYPNSNQQYRPLS 537
MA G P S H P + P G Q P Q P Q + RP
Sbjct: 1962 -MAPMGMNPPPMTRGPSGHLEPG---MGPTGMQQQPPWSQGGLPQPQQLQSG--MPRPAM 2015
Query: 538 HPVAYSPQRGQQLPQPS-QQPGLQPMMPNQ-QQAAYQGMI--------GVQQPQNQGLLS 587
VA Q PQP Q G+ P+ P Q A Q ++ +QQ Q +L
Sbjct: 2016 MSVAQHGQPLNMAPQPGLGQVGISPLKPGTVSQQALQNLLRTLRSPSSPLQQQQVLSILH 2075
Query: 588 SQRSSMGGQMQGLVVQYTPLPSYQVPVGSDSQNVVQPPFQQPMLV--------PVSQS-- 637
+ + ++ +Y +P G QP Q P + P Q+
Sbjct: 2076 ANPQLLAAFIKQRAAKYANSNPQPIP-GQPGMPQGQPGLQPPTMPGQQGVHSNPAMQNMN 2134
Query: 638 -VQGGLPAAGVPVYYSMIPPAQQNGTSPSVGFLQPPGSEQYQMPQSPSPC--------SP 688
+Q G+ AG+P P QQ P +G + P ++Q M + P
Sbjct: 2135 PMQAGVQRAGLP----QQQPQQQ--LQPPMGGMSPQ-AQQMNMNHNTMPSQFRDILRRQQ 2187
Query: 689 PQMPQQYSGVSPS-GPGVV-VMQLNVPNG-PQPPQNPSMVQ--WSHCKYYSMDQRGQKPG 743
QQ G P GPG+ Q P G PPQ +Q + +M Q GQ P
Sbjct: 2188 MMQQQQQQGAGPGIGPGMANHNQFQQPQGVGYPPQQQQRMQHHMQQMQQGNMGQIGQLPQ 2247
Query: 744 DL-YSPDSSPQANTQ-MSSSPVTSPTQSPAPSP 774
L +S QA Q + + SP Q SP
Sbjct: 2248 ALGAEAGASLQAYQQRLLQQQMGSPVQPNPMSP 2280
Score = 38.5 bits (88), Expect = 0.031
Identities = 59/216 (27%), Positives = 76/216 (35%), Gaps = 34/216 (15%)
Query: 371 GRISRPGMALGAPEVCNQVTSSQSVRG-LLPCTAQQQQQQQQQQLPALPPTPQQQPPLNN 429
G++++PG AL P S +G LP T Q +P L P+ Q P
Sbjct: 737 GQLAQPG-ALNPPMGYGPRMQQPSNQGQFLPQTQFPSQGMNVTNIP-LAPSSGQAPVSQA 794
Query: 430 HMISQADDLSNPFGQMSLSRQGS-----------TEAADPSAALFQTPL---------IS 469
M S + +++P M QGS PS +TP
Sbjct: 795 QMSSSSCPVNSPI--MPPGSQGSHIHCPQLPQPALHQNSPSPVPSRTPTPHHTPPSIGAQ 852
Query: 470 QHPQQTSFIMASTGQPLPTSNYSTSSHAPPTQQVLPPQGYMQPPQQIQVSY------YPP 523
Q P T T +P S + H PP Q PP Q PQQ+Q S P
Sbjct: 853 QPPATTIPAPVPTPPAMPPGPQSQALHPPPRQTPTPPT--TQLPQQVQPSLPAAPSADQP 910
Query: 524 GQYPNSNQQYRPLSHPVAYSPQRGQQLPQPSQQPGL 559
Q P S QQ S P +P Q P QP +
Sbjct: 911 QQQPRS-QQSTAASVPTPTAPLLPPQPATPLSQPAV 945
Score = 34.7 bits (78), Expect = 0.45
Identities = 48/193 (24%), Positives = 67/193 (34%), Gaps = 47/193 (24%)
Query: 658 QQNGTSPSVGFLQPPGSEQYQMPQSPSPCSPPQ------MPQQYSGVSPSGP---GVVVM 708
QQ SP+ P +Q PQ+P P S PQ MP +GP G
Sbjct: 1844 QQGLPSPTPATPTTPTGQQPTTPQTPQPTSQPQPTPPNSMPPYLPRTQAAGPVSQGKAAG 1903
Query: 709 QLNVPNGPQPPQNP--------------------SMVQWSHCKYYSMDQRGQKPGDLYSP 748
Q+ P PQ Q P + Q +H + + Q+P P
Sbjct: 1904 QVTPPTPPQTAQPPLPGPPPAAVEMAMQIQRAAETQRQMAHVQIF------QRPIQHQMP 1957
Query: 749 DSSPQANTQMSSSPVTSPTQSPAPSPVTSLSSVCTGLSPLPVLTQ--FPRPGGPAQGDGR 806
+P A M+ P+T PS TG+ P +Q P+P G R
Sbjct: 1958 PMTPMAPMGMNPPPMTR-----GPSGHLEPGMGPTGMQQQPPWSQGGLPQPQQLQSGMPR 2012
Query: 807 YSLL-----GQPL 814
+++ GQPL
Sbjct: 2013 PAMMSVAQHGQPL 2025
>gi|58530876 melanoma antigen family C, 1 [Homo sapiens]
Length = 1142
Score = 61.2 bits (147), Expect = 4e-09
Identities = 136/533 (25%), Positives = 194/533 (36%), Gaps = 75/533 (14%)
Query: 287 FSSSSHKRRQIFRGNREG-LSRTSSSRQSSTDSELKSLEPRPWSSTDSDGSVRSMRPPVT 345
F SS + F G + L S SST L P ST ++ P+T
Sbjct: 354 FQSSPESAQSTFEGFPQSPLQIPGSPSFSSTLLSLFQSSPERTHSTFEGFPQSPLQIPMT 413
Query: 346 KASSFSGISILTRGDSIGSSKGGSAGRISRPGMALGAPEVCNQVTSSQSVRGLLPCTAQQ 405
+ S + +SIL S G P+ Q+ S S L Q
Sbjct: 414 SSFSSTLLSILQSSPESAQSAFE------------GFPQSPLQIPVSSSFSYTLLSLFQS 461
Query: 406 QQQQQQQQLPALPPTPQQQPPLNNHMISQADDLSNPFGQMSLSRQGSTEAADPSAALF-Q 464
++ P +P Q P ++ S + L + F Q + E S Q
Sbjct: 462 SPERTHSTFEGFPQSPLQIPVSSS---SSSSTLLSLFQSSPECTQSTFEGFPQSPLQIPQ 518
Query: 465 TPLISQHPQQTSFIMASTGQPLPTSNYSTSSH-----APPTQQVLPPQGYMQPPQQIQVS 519
+P ++ I+ S LP S S H P + L P + Q P Q + S
Sbjct: 519 SPPEGENTHSPLQIVPS----LPEWEDSLSPHYFPQSPPQGEDSLSPHYFPQSPPQGEDS 574
Query: 520 YYPPGQYPNSNQQYRPLS-HPVAYSPQRGQQLPQPSQQPGLQPMMPNQQQAAYQGMIGVQ 578
P +P S Q LS H SP +G+ P P P+ + Q++ Q + +
Sbjct: 575 L-SPHYFPQSPQGEDSLSPHYFPQSPPQGEDSMSPLYFPQ-SPLQGEEFQSSLQSPVSIC 632
Query: 579 QPQN-----QGLLSSQRSSMGGQMQGLVVQYTPLPSYQVPV-GSDSQNVVQPPFQQP--- 629
Q S +S G +Q +PL S Q P G SQ+ +Q P P
Sbjct: 633 SSSTPSSLPQSFPESSQSPPEGPVQ------SPLHSPQSPPEGMHSQSPLQSPESAPEGE 686
Query: 630 -MLVP--VSQSVQGGLPAAGVPVYYSMIPPAQQNGTSPSVGFLQPPGSEQYQMP-QSP-S 684
L P + QS G + +++ PP ++ SP PP E +Q QSP S
Sbjct: 687 DSLSPLQIPQSPLEGEDSLS-SLHFPQSPPEWEDSLSPLHFPQFPPQGEDFQSSLQSPVS 745
Query: 685 PCSPPQMPQQYSGVSPSGPGVVVMQLNVPNGPQ-PPQNPSMVQWSHCKYYSMDQRGQKPG 743
CS S S S P + P PQ PP+ P+ S QR
Sbjct: 746 ICS--------SSTSLSLPQ------SFPESPQSPPEGPAQ---------SPLQRPVSSF 782
Query: 744 DLYSPDSSPQANTQMSSSPVTSPTQSPAPSPVTSL-SSVCTGLSPLPVLTQFP 795
Y+ S Q++ + SP P QSP SPV+S SS + LS ++ FP
Sbjct: 783 FSYTLASLLQSSHESPQSPPEGPAQSPLQSPVSSFPSSTSSSLSQSSPVSSFP 835
Score = 49.7 bits (117), Expect = 1e-05
Identities = 137/586 (23%), Positives = 193/586 (32%), Gaps = 112/586 (19%)
Query: 287 FSSSSHKRRQIFRGNREGLSRTSSSRQ-SSTDSELKSLEPRPWSSTDSDGSVRSMRPPVT 345
F SS + F G + + SR SST + P ST + ++ PV+
Sbjct: 179 FQSSPESTQSPFEGFPQSPLQIPVSRSFSSTLLSIFQSSPERTQSTFEGFAQSPLQIPVS 238
Query: 346 KASSFSGISILTRGDSIGSSKGGSAGRISRPGMALGAPEVCNQVTSSQSVRGLLPCTAQQ 405
+SS + +S+ S + S Q+ S S L Q
Sbjct: 239 PSSSSTLLSLFQSFSERTQSTFEGFAQSSL------------QIPVSPSFSSTLVSLFQS 286
Query: 406 QQQQQQQQLPALPPTPQQQPPLNNHMISQADDLSNPFGQMSLSRQGSTEAADPSAALFQT 465
++ Q P +P Q P + S + L + F Q S R ST P + L Q
Sbjct: 287 SPERTQSTFEGFPQSPLQIPVSS----SSSSTLLSLF-QSSPERTHSTFEGFPQS-LLQI 340
Query: 466 PLISQHPQQTSFIMASTGQPLPTSNYSTSSHAPPTQQVLPPQGYMQPPQQIQVSYYPPGQ 525
P+ S S + S Q P S ST +G+ Q P QI S
Sbjct: 341 PMTSSF----SSTLLSIFQSSPESAQSTF------------EGFPQSPLQIPGSPSFSST 384
Query: 526 YPNSNQQYRPLSHPVAYS-PQRGQQLPQPSQQPG----LQPMMPNQQQAAYQGM------ 574
+ Q +H PQ Q+P S + P Q+A++G
Sbjct: 385 LLSLFQSSPERTHSTFEGFPQSPLQIPMTSSFSSTLLSILQSSPESAQSAFEGFPQSPLQ 444
Query: 575 IGVQQPQNQGLLSSQRSSMGGQMQGLVVQYTPLPSYQVPVGSDSQNVV------------ 622
I V + LLS +SS + + P Q+PV S S +
Sbjct: 445 IPVSSSFSYTLLSLFQSSP--ERTHSTFEGFPQSPLQIPVSSSSSSSTLLSLFQSSPECT 502
Query: 623 --------QPPFQQPMLVPVSQSVQGGLPAAGV---------PVYYSMIPPAQQNGTSPS 665
Q P Q P P ++ L P Y+ PP ++ SP
Sbjct: 503 QSTFEGFPQSPLQIPQSPPEGENTHSPLQIVPSLPEWEDSLSPHYFPQSPPQGEDSLSPH 562
Query: 666 VGFLQPPGSEQYQMPQSPSPCSPPQMPQQYSGVSPSGPGVVVMQLNVPNGPQPPQNPSMV 725
PP E S SP PQ PQ +SP + P G + +P
Sbjct: 563 YFPQSPPQGED-----SLSPHYFPQSPQGEDSLSPH-----YFPQSPPQG-EDSMSPLYF 611
Query: 726 QWSHCKYYSMDQRGQKPGDLYS---PDSSPQANTQMSSSPVTSPTQSP------------ 770
S + Q P + S P S PQ+ + S SP P QSP
Sbjct: 612 PQSPLQGEEFQSSLQSPVSICSSSTPSSLPQSFPESSQSPPEGPVQSPLHSPQSPPEGMH 671
Query: 771 APSPVTSLSSVCTG---LSPLPVLTQFPRPGGPAQGDGRYSLLGQP 813
+ SP+ S S G LSPL + P P +G+ S L P
Sbjct: 672 SQSPLQSPESAPEGEDSLSPLQI------PQSPLEGEDSLSSLHFP 711
Score = 31.6 bits (70), Expect = 3.8
Identities = 48/180 (26%), Positives = 70/180 (38%), Gaps = 38/180 (21%)
Query: 613 PVGSDSQNVVQPPFQQPMLVPVSQSVQGGLPAAGVPVYYSMIPPAQQNGTSPSVGFLQPP 672
P G DSQ+ P+ +P S P + +Y P ++ G S +PP
Sbjct: 26 PEGEDSQS--------PLQIPQSS------PESDDTLYPLQSPQSRSEGEDSSDPLQRPP 71
Query: 673 GSEQ----YQMPQSPSPCSPPQMPQQYSGVSPSGP---GVVVMQLNVPNG---PQPPQNP 722
+ Q+PQS Q P Q S SP G + + + P G P QNP
Sbjct: 72 EGKDSQSPLQIPQSSPEGDDTQSPLQNSQSSPEGKDSLSPLEISQSPPEGEDVQSPLQNP 131
Query: 723 SMVQWSHCK---YYSMDQRGQKPGD------LYSPDSSPQANTQMS---SSPVTSPTQSP 770
+ +S + S + Q P + L P S+ ++T +S SSP TQSP
Sbjct: 132 ASSFFSSALLSIFQSSPESTQSPFEGFPQSVLQIPVSAASSSTLVSIFQSSP--ESTQSP 189
>gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens]
Length = 1499
Score = 61.2 bits (147), Expect = 4e-09
Identities = 131/565 (23%), Positives = 191/565 (33%), Gaps = 115/565 (20%)
Query: 288 SSSSHKRRQIFRGNREGLSRTSSSRQSSTDSELKSLEPRPWSSTDSDGSVRSMRPPVTKA 347
S ++ +Q F G + S ++ D P S+ G+ R P+ A
Sbjct: 839 SQFPNQGQQGFSGGQGPYQAMSQDMGNTQDMFSPDQSSMPMSNV---GTTRLSHMPLPPA 895
Query: 348 SSFSGISILTRGDSIGSSKGG---SAGRISRPGMALGAPEVCNQVTSSQSVRGLLPCTAQ 404
S+ G +G S ++ PGM +QV S +
Sbjct: 896 SNPPGTVHSAPNRGLGRRPSDLTISINQMGSPGMGHLKSPTLSQVHSPLVTSPSANLKSP 955
Query: 405 QQQQQQQQQLPALPPTPQQQPPLNNHMISQADDLSNP--FGQMSLSRQGSTEAADPSAAL 462
Q Q A PP P + P + +S +P S++ A P A+
Sbjct: 956 QTPSQMVPLPSANPPGPLKSPQVLGSSLSVRSPTGSPSRLKSPSMAVPSPGWVASPKTAM 1015
Query: 463 FQTPLISQHPQQTSFIMASTGQP------LPTSNYSTSSHAPPTQQVLPPQGYMQPPQQI 516
+P +SQ+ Q + +ST LP S +SS APP PP G M P
Sbjct: 1016 -PSPGVSQNKQPPLNMNSSTTLSNMEQGTLPPSGPRSSSSAPPAN---PPSGLMNPSLPF 1071
Query: 517 QVSYYP-PGQYPNS------NQQYRPLSHPVAYS-------------PQRGQQLPQPSQQ 556
S P P Q P S ++ P S P+ ++ P R P P Q
Sbjct: 1072 TSSPDPTPSQNPLSLMMTQMSKYAMPSSTPLYHNAIKTIATSDDELLPDRPLLPPPPPPQ 1131
Query: 557 ---PGLQPMMPNQQQ---AAYQGMIGVQQPQNQGLLSSQRSSMGGQMQGLVVQYTPLPSY 610
PG+ P+Q AA Q +G+ P Q L +M + TPL S
Sbjct: 1132 GSGPGISNSQPSQMHLNSAAAQSPMGMNLPGQQPLSHEPPPAM-------LPSPTPLGS- 1183
Query: 611 QVPVGSDSQNVVQPPFQQPMLVPVSQSVQGGLPAAGVPVYYSMIPPAQQNGTSPSVGFLQ 670
+P+ ++Q PP M+ P GG + P G PS +
Sbjct: 1184 NIPLHPNAQGTGGPPQNSMMMAP------GGPDSLNAPC-----------GPVPSSSQMM 1226
Query: 671 PPGSEQYQMPQSPSPCSPPQMPQQYSGVSPS-----GPGVVV-----MQL------NVPN 714
P PP++ Q + ++P+ GPG+ M L N P
Sbjct: 1227 P---------------FPPRLQQPHGAMAPTGGGGGGPGLQQHYPSGMALPPEDLPNQPP 1271
Query: 715 GPQPPQNPSMVQWSHCKYYSMDQRGQKPGDLYSPDSSPQANTQMSS---SPVTSPTQSPA 771
GP PPQ M + + GD Y P P + ++ S V PT P
Sbjct: 1272 GPMPPQQHLMGK----------AMAGRMGDAYPPGVLPGVASVLNDPELSEVIRPT--PT 1319
Query: 772 PSPVTSLSSVCTGLSPLPVLTQFPR 796
P LS + P L FP+
Sbjct: 1320 GIPEFDLSRIIPSEKPSSTLQYFPK 1344
Score = 38.5 bits (88), Expect = 0.031
Identities = 64/288 (22%), Positives = 98/288 (34%), Gaps = 27/288 (9%)
Query: 458 PSAALFQTPLISQHPQQTSFIMASTGQPLPTSNYSTSSHAPPTQQVLPPQGYMQPPQQIQ 517
P A L Q P + P+ S G P S PP PP PP
Sbjct: 272 PRAKLDQAPKVPPTPEPLPLSTPSAGTP--------QSQPPPLPPPPPPAPGSAPP---- 319
Query: 518 VSYYPPGQYPNSNQQYRPLSHPVAYSP--QRGQQLPQPSQQPGLQPMMPNQQQAAYQGMI 575
+ P G +S+Q P S A + G P+ P+ P ++ G
Sbjct: 320 -ALPPEGPPEDSSQDLAPNSVGAASTGGGTGGTHPNTPTATTANNPLPPGGDPSSAPGPA 378
Query: 576 GVQQPQNQGLLSSQRSSMGGQMQGLVVQYTPLPSYQVPVGSDSQNVVQPPFQQPMLVPVS 635
+ + G + QRS +G + GL + + D + ++ + P
Sbjct: 379 LLGEAAAPG--NGQRSLVGSE--GLSKEQLEHRERSLQTLRDIERLL---LRSGETEPFL 431
Query: 636 QSVQGGLPAAGVPVYYSMIPPAQQNGTSPSVGFLQPPGSEQYQMPQSPSPCSPPQMPQQY 695
+ GG G P PP QQ T+P G + Q + Q+ S PP + +
Sbjct: 432 KGPPGGAGEGGPPAQAP--PPPQQPPTAPPSGLKKYEEPLQSMISQTQSLGGPP-LEHEV 488
Query: 696 SGVSPSGPGVVVMQLNVPNGPQPPQNPSMVQWSHC--KYYSMDQRGQK 741
G P G M + + Q P V W +YY +R ++
Sbjct: 489 PGHPPGGDMGQQMNMMIQRLGQDSLTPEQVAWRKLQEEYYEEKRRKEE 536
Score = 37.7 bits (86), Expect = 0.053
Identities = 85/365 (23%), Positives = 132/365 (36%), Gaps = 69/365 (18%)
Query: 490 NYSTSSHAPPTQQVLPPQGYMQPPQQIQVSYYPPGQYPNSNQQYRPL-SHPVAYSPQRGQ 548
N + + P QQ+L Q P + P G P + R S V PQ+
Sbjct: 781 NMNLNVQMTPQQQMLMSQKMRGPGDLMG----PQGLSPEEMARVRAQNSSGVMGGPQK-- 834
Query: 549 QLPQPSQQPGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSSQ------RSSMGGQMQGLV- 601
+ PSQ PNQ Q + G G Q +Q + ++Q +SSM G
Sbjct: 835 -MLMPSQ-------FPNQGQQGFSGGQGPYQAMSQDMGNTQDMFSPDQSSMPMSNVGTTR 886
Query: 602 VQYTPLPSYQVPVGSDSQNVVQPPFQQPMLVPVSQSVQGGLPAAGVPVYYSMIPPAQQNG 661
+ + PLP P G+ + ++P + +S + G
Sbjct: 887 LSHMPLPPASNPPGTVHSAPNRGLGRRPSDLTISINQMG--------------------- 925
Query: 662 TSPSVGFLQPPGSEQYQMPQSPSPCSPPQMPQQYSGVSP----------SGPGVVVMQLN 711
SP +G L+ P Q P SP + + PQ S + P P V+ L+
Sbjct: 926 -SPGMGHLKSPTLSQVHSPLVTSPSANLKSPQTPSQMVPLPSANPPGPLKSPQVLGSSLS 984
Query: 712 V--PNG-PQPPQNPSMV----QWSHCKYYSMDQRG---QKPGDLYSPDSSPQANTQMSSS 761
V P G P ++PSM W +M G K L S+ +N + +
Sbjct: 985 VRSPTGSPSRLKSPSMAVPSPGWVASPKTAMPSPGVSQNKQPPLNMNSSTTLSNMEQGTL 1044
Query: 762 PVTSPTQSPAPSPVTSLSSVCTGLSPLPVLTQFPRPGGPAQGDGRYSLLGQPLQYNLSIC 821
P + P S + P S + ++P T P P P+Q + ++ Q +Y +
Sbjct: 1045 PPSGPRSSSSAPPANPPSGL---MNPSLPFTSSPDP-TPSQ-NPLSLMMTQMSKYAMPSS 1099
Query: 822 PPLLH 826
PL H
Sbjct: 1100 TPLYH 1104
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 60.5 bits (145), Expect = 8e-09
Identities = 127/565 (22%), Positives = 186/565 (32%), Gaps = 126/565 (22%)
Query: 259 RDDASMDRDDNQTGQNGYLNDIRLSKEAFSSSSHKRRQIFRGNR----EGLSRTSSSRQS 314
+++AS N+ + +D + SS K ++I R N EG S S S
Sbjct: 83 KEEASSPLKSNKRQREKVASDTE-EADRTSSKKTKTQEISRPNSPSEGEGESSDSRSVND 141
Query: 315 STDSELKSLE----------PRPWSS-TDSDGSVRSM----RPPVTKASSFSGISILTRG 359
S+ K ++ P P + +DSD S + +PP +A + G++
Sbjct: 142 EGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPT--GVTPAPSS 199
Query: 360 DSIGSSK----GGSAGRISRPGMALGAPEVCNQVTSSQSVRGLLPCTAQQQQ---QQQQQ 412
G+ + G + + P G+P Q+ +P T QQ Q+
Sbjct: 200 APPGTPQLPTPGPTPSATAVPPQ--GSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRP 257
Query: 413 QLPALPPTPQQQPPLNNHMISQADDLSNPFGQMSLSRQGSTEAADPSAALFQTPLISQHP 472
P PP P PPL S + Q L QG P Q + QHP
Sbjct: 258 PSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGP-----PGPHSLQAGPLLQHP 312
Query: 473 QQTSFI----MASTGQP----------------LPTSNYSTSSHAPPTQQVLPP----QG 508
AS GQ LP S + S PP +Q LPP
Sbjct: 313 GPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMP 372
Query: 509 YMQPPQQIQVSYYPPGQYPNSNQQYRPLSHPVAYSPQRGQQLPQPSQQPGLQPMMPNQQQ 568
+++PP + P P +++ LS P +S LP P P L+P+
Sbjct: 373 HIKPPPTTPIPQLPA---PQAHKHPPHLSGPSPFS--MNANLPPP---PALKPL------ 418
Query: 569 AAYQGMIGVQQPQNQGLLSSQRSSMGGQMQGLVVQYTPLPSY--QVPVGSDSQNVVQPPF 626
L + S L+ Q PLPS Q P + SQN+ PP
Sbjct: 419 --------------SSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPA 464
Query: 627 QQPMLVPVSQSVQGGLPAAGVPVYYSMIPPAQQNGTSPSVGFLQPPGSEQYQMPQSPSPC 686
P P + P QPP ++ +P P P
Sbjct: 465 SHP------------------PTGLHQVAP-------------QPPFAQHPFVPGGPPPI 493
Query: 687 SPPQMPQQYSGVSPSGPGVVVMQLNVPNGPQPPQNPSMVQWSHCKYYSMDQRGQKPGDLY 746
+PP P + P+GPG P S+ S C ++ + + D
Sbjct: 494 TPPTCPS--TSTPPAGPGT---SAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAE 548
Query: 747 SPDSSPQANTQMSSSPVTSPTQSPA 771
P+S P S P T S A
Sbjct: 549 EPESPPPPPRSPSPEPTVVDTPSHA 573
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 60.5 bits (145), Expect = 8e-09
Identities = 127/565 (22%), Positives = 186/565 (32%), Gaps = 126/565 (22%)
Query: 259 RDDASMDRDDNQTGQNGYLNDIRLSKEAFSSSSHKRRQIFRGNR----EGLSRTSSSRQS 314
+++AS N+ + +D + SS K ++I R N EG S S S
Sbjct: 637 KEEASSPLKSNKRQREKVASDTE-EADRTSSKKTKTQEISRPNSPSEGEGESSDSRSVND 695
Query: 315 STDSELKSLE----------PRPWSS-TDSDGSVRSM----RPPVTKASSFSGISILTRG 359
S+ K ++ P P + +DSD S + +PP +A + G++
Sbjct: 696 EGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPT--GVTPAPSS 753
Query: 360 DSIGSSK----GGSAGRISRPGMALGAPEVCNQVTSSQSVRGLLPCTAQQQQ---QQQQQ 412
G+ + G + + P G+P Q+ +P T QQ Q+
Sbjct: 754 APPGTPQLPTPGPTPSATAVPPQ--GSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRP 811
Query: 413 QLPALPPTPQQQPPLNNHMISQADDLSNPFGQMSLSRQGSTEAADPSAALFQTPLISQHP 472
P PP P PPL S + Q L QG P Q + QHP
Sbjct: 812 PSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGP-----PGPHSLQAGPLLQHP 866
Query: 473 QQTSFI----MASTGQP----------------LPTSNYSTSSHAPPTQQVLPP----QG 508
AS GQ LP S + S PP +Q LPP
Sbjct: 867 GPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMP 926
Query: 509 YMQPPQQIQVSYYPPGQYPNSNQQYRPLSHPVAYSPQRGQQLPQPSQQPGLQPMMPNQQQ 568
+++PP + P P +++ LS P +S LP P P L+P+
Sbjct: 927 HIKPPPTTPIPQLPA---PQAHKHPPHLSGPSPFS--MNANLPPP---PALKPL------ 972
Query: 569 AAYQGMIGVQQPQNQGLLSSQRSSMGGQMQGLVVQYTPLPSY--QVPVGSDSQNVVQPPF 626
L + S L+ Q PLPS Q P + SQN+ PP
Sbjct: 973 --------------SSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPA 1018
Query: 627 QQPMLVPVSQSVQGGLPAAGVPVYYSMIPPAQQNGTSPSVGFLQPPGSEQYQMPQSPSPC 686
P P + P QPP ++ +P P P
Sbjct: 1019 SHP------------------PTGLHQVAP-------------QPPFAQHPFVPGGPPPI 1047
Query: 687 SPPQMPQQYSGVSPSGPGVVVMQLNVPNGPQPPQNPSMVQWSHCKYYSMDQRGQKPGDLY 746
+PP P + P+GPG P S+ S C ++ + + D
Sbjct: 1048 TPPTCPS--TSTPPAGPGT---SAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAE 1102
Query: 747 SPDSSPQANTQMSSSPVTSPTQSPA 771
P+S P S P T S A
Sbjct: 1103 EPESPPPPPRSPSPEPTVVDTPSHA 1127
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 60.5 bits (145), Expect = 8e-09
Identities = 127/565 (22%), Positives = 186/565 (32%), Gaps = 126/565 (22%)
Query: 259 RDDASMDRDDNQTGQNGYLNDIRLSKEAFSSSSHKRRQIFRGNR----EGLSRTSSSRQS 314
+++AS N+ + +D + SS K ++I R N EG S S S
Sbjct: 637 KEEASSPLKSNKRQREKVASDTE-EADRTSSKKTKTQEISRPNSPSEGEGESSDSRSVND 695
Query: 315 STDSELKSLE----------PRPWSS-TDSDGSVRSM----RPPVTKASSFSGISILTRG 359
S+ K ++ P P + +DSD S + +PP +A + G++
Sbjct: 696 EGSSDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPT--GVTPAPSS 753
Query: 360 DSIGSSK----GGSAGRISRPGMALGAPEVCNQVTSSQSVRGLLPCTAQQQQ---QQQQQ 412
G+ + G + + P G+P Q+ +P T QQ Q+
Sbjct: 754 APPGTPQLPTPGPTPSATAVPPQ--GSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRP 811
Query: 413 QLPALPPTPQQQPPLNNHMISQADDLSNPFGQMSLSRQGSTEAADPSAALFQTPLISQHP 472
P PP P PPL S + Q L QG P Q + QHP
Sbjct: 812 PSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGP-----PGPHSLQAGPLLQHP 866
Query: 473 QQTSFI----MASTGQP----------------LPTSNYSTSSHAPPTQQVLPP----QG 508
AS GQ LP S + S PP +Q LPP
Sbjct: 867 GPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMP 926
Query: 509 YMQPPQQIQVSYYPPGQYPNSNQQYRPLSHPVAYSPQRGQQLPQPSQQPGLQPMMPNQQQ 568
+++PP + P P +++ LS P +S LP P P L+P+
Sbjct: 927 HIKPPPTTPIPQLPA---PQAHKHPPHLSGPSPFS--MNANLPPP---PALKPL------ 972
Query: 569 AAYQGMIGVQQPQNQGLLSSQRSSMGGQMQGLVVQYTPLPSY--QVPVGSDSQNVVQPPF 626
L + S L+ Q PLPS Q P + SQN+ PP
Sbjct: 973 --------------SSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPA 1018
Query: 627 QQPMLVPVSQSVQGGLPAAGVPVYYSMIPPAQQNGTSPSVGFLQPPGSEQYQMPQSPSPC 686
P P + P QPP ++ +P P P
Sbjct: 1019 SHP------------------PTGLHQVAP-------------QPPFAQHPFVPGGPPPI 1047
Query: 687 SPPQMPQQYSGVSPSGPGVVVMQLNVPNGPQPPQNPSMVQWSHCKYYSMDQRGQKPGDLY 746
+PP P + P+GPG P S+ S C ++ + + D
Sbjct: 1048 TPPTCPS--TSTPPAGPGT---SAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAE 1102
Query: 747 SPDSSPQANTQMSSSPVTSPTQSPA 771
P+S P S P T S A
Sbjct: 1103 EPESPPPPPRSPSPEPTVVDTPSHA 1127
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 59.7 bits (143), Expect = 1e-08
Identities = 113/462 (24%), Positives = 165/462 (35%), Gaps = 83/462 (17%)
Query: 404 QQQQQQQQQQLPALPPTPQQQPPLNNHMISQADDLSNPFGQMSLSRQGSTEAADPSAALF 463
QQ QQ Q P LPP Q P SQ+ P Q +S++G + P A
Sbjct: 552 QQPYYSQQPQPPHLPPQAQYLP-------SQSQQRYQP--QQDMSQEGYGTRSQPPLAPG 602
Query: 464 Q-----TPLISQHPQQTSFIMASTGQPLPTSNYSTSSHAPPT--------QQVLPPQGYM 510
+ LI Q + ++ + LPT +T S A Q P Q
Sbjct: 603 KPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGDQSNPAQSPF 662
Query: 511 QPPQQIQVSYYPPGQYPNSNQQYRPLSHPVAYSPQRGQQLPQPSQQPGLQ--PMMPNQQ- 567
P +S P G P+ P+ PV + R + P+ PG Q P P Q
Sbjct: 663 SPHASPHLSSIPGGPSPS------PVGSPVGSNQSRSGPI-SPASIPGSQMPPQPPGSQS 715
Query: 568 -QAAYQGMIGVQQPQNQGLLSS-----QRSSMGGQMQGLVVQYTPLPSYQVPVG------ 615
+++ + PQ +G ++ Q + G Q G + P P Q+ G
Sbjct: 716 ESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQ 775
Query: 616 SDSQNVVQPPFQQPMLVPVSQSVQGGLPAAGVPVYYSMIPPAQQNGTSPSVGFL------ 669
S+S P Q QG P YS +P A +G P +G
Sbjct: 776 SNSSGTYGPQMSQ-------YGPQGNYSR---PPAYSGVPSASYSGPGPGMGISANNQMH 825
Query: 670 -QPPGSEQYQMPQSPSPCSPPQ---MPQQYSGVSPSGPGVVVMQLNVPNGPQPP------ 719
Q P +P P + Q P S ++PS PG + Q GP P
Sbjct: 826 GQGPSQPCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPG-MSQQGGPGMGPPMPTVNRKA 884
Query: 720 QNPSMVQWSHCKYYSMDQRGQKPGDLYS---PDSSPQANTQMSSSPV---TSPTQSPAPS 773
Q + + ++G PG S SSP + +SS + +P S AP+
Sbjct: 885 QEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSPYSQPMNNSSSLMNTQAPPYSMAPA 944
Query: 774 PVTSLSSVCTGLSPL--PVLTQFPRPGGPAQGDGRYSLLGQP 813
V S S+ GL+ + P ++ P P + DG+ QP
Sbjct: 945 MVNS-SAASVGLADMMSPGESKLPL---PLKADGKEEGTPQP 982
Score = 54.3 bits (129), Expect = 5e-07
Identities = 132/565 (23%), Positives = 179/565 (31%), Gaps = 116/565 (20%)
Query: 363 GSSKGGS---AGRISRPGMALGAPEVCNQVTSSQSVRGLLPCTAQQQQQQQQQQLPALPP 419
GS+ GG AG+ P GA NQ+ +S S P + P+ PP
Sbjct: 338 GSAAGGFQRFAGQNQHPS---GATPTLNQLLTSPS-----PMMRSYGGSYPEYSSPSAPP 389
Query: 420 TPQQQPPLNNHMISQADDLSNPFGQMSLSRQGSTE--AADPSAALFQT------------ 465
P QP A M L + + AA P+ A Q
Sbjct: 390 PPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPG 449
Query: 466 ------------PLISQHPQQTSFIMASTGQPLPTSNYSTSSHAPPTQQVLP-------- 505
P++ + PQ QP +S Y S+ PP Q P
Sbjct: 450 PTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTP 509
Query: 506 --------PQG------------YMQPPQQIQ---VSYYPPGQYPNSNQQYRP--LSHPV 540
PQ ++ PPQ Q Y GQ P +QQ +P L
Sbjct: 510 GAMAGMQYPQQQDSGDATWKETFWLMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQA 569
Query: 541 AYSPQRGQQLPQPSQ-----------QPGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSSQ 589
Y P + QQ QP Q QP L P PN + +I ++P + LS
Sbjct: 570 QYLPSQSQQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDL---NLIQQERPSSLPDLSGS 626
Query: 590 RSSMGGQMQGLVVQYTPLPSYQVPVGSDSQNVVQPPFQQPMLVPVSQSVQGGLPAA--GV 647
+ + + G D N Q PF P P S+ GG + G
Sbjct: 627 IDDLPTGTEATLSSAVSASGSTSSQG-DQSNPAQSPF-SPHASPHLSSIPGGPSPSPVGS 684
Query: 648 PVYYSM-----IPPAQQNGTSPSVGFLQPPGSEQYQMPQSPSPCSPPQMPQQYSGVSPSG 702
PV + I PA G+ QPPGS+ SP MPQ+ ++ +
Sbjct: 685 PVGSNQSRSGPISPASIPGSQMPP---QPPGSQSESSSHPALSQSP--MPQERGFMAGTQ 739
Query: 703 PGVVVMQLN-VPNGPQPPQNPSMVQWSHCKYYSMDQRGQKPGDLYSPDSS---PQANTQM 758
+ Q GP +PS H S Q Y P S PQ N
Sbjct: 740 RNPQMAQYGPQQTGPSMSPHPSPGGQMHAGISSFQQ--SNSSGTYGPQMSQYGPQGNYSR 797
Query: 759 SSSPVTSPTQS---PAPSPVTSLSSVCTGLSPLPVLTQFPRPGGPAQGDGRYSLLGQPLQ 815
+ P+ S P P S ++ G P P P+ G + +P
Sbjct: 798 PPAYSGVPSASYSGPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAG-----MQNRPFP 852
Query: 816 YNLSICPPLLHGQSTYTVHQGQSGL 840
N+S P G S QG G+
Sbjct: 853 GNMSSMTPSSPGMS----QQGGPGM 873
Score = 51.6 bits (122), Expect = 4e-06
Identities = 92/394 (23%), Positives = 140/394 (35%), Gaps = 39/394 (9%)
Query: 273 QNGYLNDIRLSKEAFSSSSHKRRQIFRGNREGLSRTSSSRQSSTDSELKSLEPRPW---- 328
Q Y +S+E + + S + N E L+ R SS S++ P
Sbjct: 577 QQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEA 636
Query: 329 ---SSTDSDGSVRSMRPPVTKASS-FSG-----ISILTRGDS---IGSSKGGSAGRISRP 376
S+ + GS S A S FS +S + G S +GS G + R S P
Sbjct: 637 TLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSR-SGP 695
Query: 377 GMALGAP--EVCNQVTSSQSVRGLLPCTAQQQQQQQQQQLPALPPTPQQQPPLNNHMISQ 434
P ++ Q SQS P +Q Q++ + PQ
Sbjct: 696 ISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPS 755
Query: 435 ADDLSNPFGQMSLSRQGSTEAADPSAALFQTPLISQHPQQTSFIMASTGQPLPTSNYSTS 494
+P GQM G + +++ P +SQ+ Q ++ +P+++YS
Sbjct: 756 MSPHPSPGGQM---HAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYS-- 810
Query: 495 SHAPPTQQVLPPQGYMQPPQQIQVSYYPPGQYPNSNQQYRP----LSHPVAYSPQRGQQL 550
P Q + Q P Q P G+ P++ Q RP +S SP QQ
Sbjct: 811 GPGPGMGISANNQMHGQGPSQ-PCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQ- 868
Query: 551 PQPSQQPGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSSQRSSMGGQMQGLVVQYTPLPSY 610
PG+ P MP + A + V Q S Q S G GL+ +P Y
Sbjct: 869 ----GGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSP---Y 921
Query: 611 QVPVGSDS--QNVVQPPFQQPMLVPVSQSVQGGL 642
P+ + S N PP+ + S + GL
Sbjct: 922 SQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGL 955
Score = 40.0 bits (92), Expect = 0.011
Identities = 96/408 (23%), Positives = 148/408 (36%), Gaps = 47/408 (11%)
Query: 391 SSQSVRGLLPCTAQQQQQQQQQQLPA--LPPTPQQQP-----PLNNHMISQADDLSNPFG 443
+S S++G P T Q ++P PPTP P P+ S + +PF
Sbjct: 1127 NSGSLQG--PQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGR-SSTISVHDPFS 1183
Query: 444 QMSLS----RQGSTEAADPSAALFQTPLISQHPQQTSFIMASTGQPLPTSN--YSTSSHA 497
+S S R T A + ++ + P + + + +P S+ + T
Sbjct: 1184 DVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQM 1243
Query: 498 PPTQQV----LPPQGYMQPPQQIQVSYYPPGQYPNSNQQYRPLSHPVAYSPQRGQQLPQP 553
P + P G M Q +P G + + +P P GQ P
Sbjct: 1244 PNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQYP-GQGPPSGQP-PYG 1301
Query: 554 SQQPGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSSQRSSMGGQMQGLVVQYTPLPSYQVP 613
QPGL P PN ++ GM G +++G + + + S Q Q + QY SY P
Sbjct: 1302 GHQPGLYPQQPNYKR-HMDGMYGPPAKRHEGDMYNMQYS--SQQQEMYNQYG--GSYSGP 1356
Query: 614 VGSDSQNVVQPPFQQPMLVPVSQSVQGGLP--AAGVPVYYSMIPPAQQNGTSPSVGFLQP 671
Q P+ + + Q G+P G P+ S QQN + P
Sbjct: 1357 DRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPYP 1416
Query: 672 PGSEQYQMPQSPSPCSPPQMPQQYSGVSPSGPGVVVMQLNVPNGPQPPQNPSMVQWSHCK 731
YQ Q P P Q P Y G++ + ++V + + Q P + S Q
Sbjct: 1417 -----YQNRQGPG--GPTQAP-PYPGMNRT-DDMMVPDQRINHESQWPSHVSQRQPYMSS 1467
Query: 732 YYSMDQRGQKPGDLY-SPDSSPQ--------ANTQMSSSPVTSPTQSP 770
SM + P Y +P S P A+ Q S SP++SP
Sbjct: 1468 SASMQPITRPPQPSYQTPPSLPNHISRAPSPASFQRSLENRMSPSKSP 1515
Score = 30.4 bits (67), Expect = 8.4
Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 14/69 (20%)
Query: 404 QQQQQQQQQQLP-------------ALPPTP-QQQPPLNNHMISQADDLSNPFGQMSLSR 449
QQQQQQQQQQ P A P P +QP S A ++P G LS+
Sbjct: 64 QQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSK 123
Query: 450 QGSTEAADP 458
G + A P
Sbjct: 124 PGDEDDAPP 132
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 59.7 bits (143), Expect = 1e-08
Identities = 132/552 (23%), Positives = 177/552 (32%), Gaps = 103/552 (18%)
Query: 363 GSSKGGS---AGRISRPGMALGAPEVCNQVTSSQSVRGLLPCTAQQQQQQQQQQLPALPP 419
GS+ GG AG+ P GA NQ+ +S S P + P+ PP
Sbjct: 338 GSAAGGFQRFAGQNQHPS---GATPTLNQLLTSPS-----PMMRSYGGSYPEYSSPSAPP 389
Query: 420 TPQQQPPLNNHMISQADDLSNPFGQMSLSRQGSTE--AADPSAALFQT------------ 465
P QP A M L + + AA P+ A Q
Sbjct: 390 PPPSQPQSQAAAAGAAAGGQQAAAGMGLGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPG 449
Query: 466 ------------PLISQHPQQTSFIMASTGQPLPTSNYSTSSHAPPTQQVLP-------- 505
P++ + PQ QP +S Y S+ PP Q P
Sbjct: 450 PTMGRSQGSPMDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTP 509
Query: 506 --------PQGYMQPP--QQIQVSYYPPGQYPNSNQQYRP--LSHPVAYSPQRGQQLPQP 553
PQ M P QQ Y GQ P +QQ +P L Y P + QQ QP
Sbjct: 510 GAMAGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQYLPSQSQQRYQP 569
Query: 554 SQ-----------QPGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSSQRSSMGGQMQGLVV 602
Q QP L P PN + +I ++P + LS + + +
Sbjct: 570 QQDMSQEGYGTRSQPPLAPGKPNHEDL---NLIQQERPSSLPDLSGSIDDLPTGTEATLS 626
Query: 603 QYTPLPSYQVPVGSDSQNVVQPPFQQPMLVPVSQSVQGGLPAA--GVPVYYSM-----IP 655
G D N Q PF P P S+ GG + G PV + I
Sbjct: 627 SAVSASGSTSSQG-DQSNPAQSPF-SPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPIS 684
Query: 656 PAQQNGTSPSVGFLQPPGSEQYQMPQSPSPCSPPQMPQQYSGVSPSGPGVVVMQLN-VPN 714
PA G+ QPPGS+ SP MPQ+ ++ + + Q
Sbjct: 685 PASIPGSQMPP---QPPGSQSESSSHPALSQSP--MPQERGFMAGTQRNPQMAQYGPQQT 739
Query: 715 GPQPPQNPSMVQWSHCKYYSMDQRGQKPGDLYSPDSS---PQANTQMSSSPVTSPTQS-- 769
GP +PS H S Q Y P S PQ N + P+ S
Sbjct: 740 GPSMSPHPSPGGQMHAGISSFQQ--SNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYS 797
Query: 770 -PAPSPVTSLSSVCTGLSPLPVLTQFPRPGGPAQGDGRYSLLGQPLQYNLSICPPLLHGQ 828
P P S ++ G P P P+ G + +P N+S P G
Sbjct: 798 GPGPGMGISANNQMHGQGPSQPCGAVPLGRMPSAG-----MQNRPFPGNMSSMTPSSPGM 852
Query: 829 STYTVHQGQSGL 840
S QG G+
Sbjct: 853 S----QQGGPGM 860
Score = 51.6 bits (122), Expect = 4e-06
Identities = 92/394 (23%), Positives = 140/394 (35%), Gaps = 39/394 (9%)
Query: 273 QNGYLNDIRLSKEAFSSSSHKRRQIFRGNREGLSRTSSSRQSSTDSELKSLEPRPW---- 328
Q Y +S+E + + S + N E L+ R SS S++ P
Sbjct: 564 QQRYQPQQDMSQEGYGTRSQPPLAPGKPNHEDLNLIQQERPSSLPDLSGSIDDLPTGTEA 623
Query: 329 ---SSTDSDGSVRSMRPPVTKASS-FSG-----ISILTRGDS---IGSSKGGSAGRISRP 376
S+ + GS S A S FS +S + G S +GS G + R S P
Sbjct: 624 TLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSR-SGP 682
Query: 377 GMALGAP--EVCNQVTSSQSVRGLLPCTAQQQQQQQQQQLPALPPTPQQQPPLNNHMISQ 434
P ++ Q SQS P +Q Q++ + PQ
Sbjct: 683 ISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMAQYGPQQTGPS 742
Query: 435 ADDLSNPFGQMSLSRQGSTEAADPSAALFQTPLISQHPQQTSFIMASTGQPLPTSNYSTS 494
+P GQM G + +++ P +SQ+ Q ++ +P+++YS
Sbjct: 743 MSPHPSPGGQM---HAGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPAYSGVPSASYS-- 797
Query: 495 SHAPPTQQVLPPQGYMQPPQQIQVSYYPPGQYPNSNQQYRP----LSHPVAYSPQRGQQL 550
P Q + Q P Q P G+ P++ Q RP +S SP QQ
Sbjct: 798 GPGPGMGISANNQMHGQGPSQ-PCGAVPLGRMPSAGMQNRPFPGNMSSMTPSSPGMSQQ- 855
Query: 551 PQPSQQPGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSSQRSSMGGQMQGLVVQYTPLPSY 610
PG+ P MP + A + V Q S Q S G GL+ +P Y
Sbjct: 856 ----GGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRQGSFPGMNQSGLMASSSP---Y 908
Query: 611 QVPVGSDS--QNVVQPPFQQPMLVPVSQSVQGGL 642
P+ + S N PP+ + S + GL
Sbjct: 909 SQPMNNSSSLMNTQAPPYSMAPAMVNSSAASVGL 942
Score = 40.0 bits (92), Expect = 0.011
Identities = 96/408 (23%), Positives = 148/408 (36%), Gaps = 47/408 (11%)
Query: 391 SSQSVRGLLPCTAQQQQQQQQQQLPA--LPPTPQQQP-----PLNNHMISQADDLSNPFG 443
+S S++G P T Q ++P PPTP P P+ S + +PF
Sbjct: 1114 NSGSLQG--PQTPQSTGSNSMAEVPGDLKPPTPASTPHGQMTPMQGGR-SSTISVHDPFS 1170
Query: 444 QMSLS----RQGSTEAADPSAALFQTPLISQHPQQTSFIMASTGQPLPTSN--YSTSSHA 497
+S S R T A + ++ + P + + + +P S+ + T
Sbjct: 1171 DVSDSSFPKRNSMTPNAPYQQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQM 1230
Query: 498 PPTQQV----LPPQGYMQPPQQIQVSYYPPGQYPNSNQQYRPLSHPVAYSPQRGQQLPQP 553
P + P G M Q +P G + + +P P GQ P
Sbjct: 1231 PNSSMQDMYNQSPSGAMSNLGMGQRQQFPYGASYDRRHEPYGQQYP-GQGPPSGQP-PYG 1288
Query: 554 SQQPGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSSQRSSMGGQMQGLVVQYTPLPSYQVP 613
QPGL P PN ++ GM G +++G + + + S Q Q + QY SY P
Sbjct: 1289 GHQPGLYPQQPNYKR-HMDGMYGPPAKRHEGDMYNMQYS--SQQQEMYNQYG--GSYSGP 1343
Query: 614 VGSDSQNVVQPPFQQPMLVPVSQSVQGGLP--AAGVPVYYSMIPPAQQNGTSPSVGFLQP 671
Q P+ + + Q G+P G P+ S QQN + P
Sbjct: 1344 DRRPIQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQSSSSEGPQQNMWAARNDMPYP 1403
Query: 672 PGSEQYQMPQSPSPCSPPQMPQQYSGVSPSGPGVVVMQLNVPNGPQPPQNPSMVQWSHCK 731
YQ Q P P Q P Y G++ + ++V + + Q P + S Q
Sbjct: 1404 -----YQNRQGPG--GPTQAP-PYPGMNRT-DDMMVPDQRINHESQWPSHVSQRQPYMSS 1454
Query: 732 YYSMDQRGQKPGDLY-SPDSSPQ--------ANTQMSSSPVTSPTQSP 770
SM + P Y +P S P A+ Q S SP++SP
Sbjct: 1455 SASMQPITRPPQPSYQTPPSLPNHISRAPSPASFQRSLENRMSPSKSP 1502
Score = 35.4 bits (80), Expect = 0.26
Identities = 120/508 (23%), Positives = 159/508 (31%), Gaps = 81/508 (15%)
Query: 404 QQQQQQQQQQLP-------------ALPPTP-QQQPPLNNHMISQADDLSNPFGQMSLSR 449
QQQQQQQQQQ P A P P +QP S A ++P G LS+
Sbjct: 64 QQQQQQQQQQHPISNNNSLGGAGGGAPQPGPDMEQPQHGGAKDSAAGGQADPPGPPLLSK 123
Query: 450 QGSTEAA-----DPSAALFQTP----LISQHPQQTSFIMASTGQP--LPTSNYSTSSHAP 498
G + A +P+ ++ P L +Q P + G P +P N S AP
Sbjct: 124 PGDEDDAPPKMGEPAGGRYEHPGLGALGTQQPPVA--VPGGGGGPAAVPEFNNYYGSAAP 181
Query: 499 PTQQVLPPQGYMQPPQQIQVSYYPPGQYPNSNQQYRPLSHPVAYSPQRGQQLPQPSQQPG 558
+ P G P PG + P + P + P+ Q
Sbjct: 182 ASG---GPGGRAGPCFDQHGGQQSPGMGMMHSASAAAAGAPGSMDPLQNSHEGYPNSQCN 238
Query: 559 LQPMMPNQQQAAYQGMIGVQQPQNQGLLSSQRSSMGGQMQGLVVQYTPLPSYQVPVG--- 615
P G G + G + GG G V + G
Sbjct: 239 HYPGYSRPGAGGGGGGGGGGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGG 298
Query: 616 -----SDSQNVVQPPFQQ---PMLVP-----------VSQSVQGGLPA-AGVPVYYS-MI 654
S V+ P QQ M+ P + S GG AG + S
Sbjct: 299 GYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLSKAAAGSAAGGFQRFAGQNQHPSGAT 358
Query: 655 PPAQQNGTSPSVGFLQPPGS-EQYQMPQSPSPCSPPQMPQQYSGVSPSGPG----VVVMQ 709
P Q TSPS GS +Y P +P P PP PQ + + + G M
Sbjct: 359 PTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPP--PPSQPQSQAAAAGAAAGGQQAAAGMG 416
Query: 710 LNVPNGPQ----PPQNPSMVQWSH--------------CKYYSMDQRGQKPGDLYSPDSS 751
L G Q P + Q SH + MD K LY S+
Sbjct: 417 LGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSN 476
Query: 752 PQANTQMSSSPVTSPTQSPAPS--PVTSLSSVCTGLSPLPVLTQFPRPGGPAQGDGRYSL 809
P + Q SS P P P+ ++ + Q P QG Y
Sbjct: 477 PHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQMPPQYGQQGVSGYCQ 536
Query: 810 LGQPLQYNLSICPPLLHGQSTYTVHQGQ 837
GQ Y+ PP L Q+ Y Q Q
Sbjct: 537 QGQQPYYSQQPQPPHLPPQAQYLPSQSQ 564
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 59.3 bits (142), Expect = 2e-08
Identities = 119/471 (25%), Positives = 158/471 (33%), Gaps = 66/471 (14%)
Query: 383 PEVCNQVTSSQSVRGLLPCTAQQQQQQQQQQLP--ALPP--TPQQQPPLNNHMISQADDL 438
P Q S +G P QQ QQQQ P PP TP QP SQ L
Sbjct: 452 PPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQL 511
Query: 439 SNPFGQMSLSRQGSTEAADPSAALF--QTPLISQHPQ-QTSFIMASTGQPLPTSNYSTSS 495
+ Q S+Q S S A + Q QHPQ Q + P +
Sbjct: 512 QS--SQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPA 569
Query: 496 HAPPTQQVLPPQGYMQPPQQI---QVSYYPPGQYPNSNQQYRPLSHPVAYSPQRGQQLPQ 552
+ +QQ PQ Q QQ Q + PP + + + S P S + GQ+
Sbjct: 570 PSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQEDMN 629
Query: 553 PSQQ--PGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSSQRSSMGGQMQGLVVQYTPLPSY 610
S Q P P + G G P G+ +S SS G+ Q P S
Sbjct: 630 LSLQSRPSSLPDLSGSIDDLPMGTEGALSP---GVSTSGISSSQGE------QSNPAQSP 680
Query: 611 QVPVGSDSQNVVQPPFQQPMLVP--VSQSVQGGLPAAGVPVYYSMIPPAQQNGTSPSV-- 666
P S ++ P P+ P V+QS G L A VP + +PP +G S S+
Sbjct: 681 FSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVP--GNQMPPRPPSGQSDSIMH 738
Query: 667 ------------GFLQ-PPGSEQYQMPQSPSPCSPPQMPQQYSGVSPSGPGVVVMQLNVP 713
G++Q P QY PQ S SP Q G +G G
Sbjct: 739 PSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSP---RQPSGGQIHTGMGSYQQNSMGS 795
Query: 714 NGPQPPQNPSMVQWSHCKYYSMDQRGQKPGDLYSPDSSPQ-ANTQMSSSPVTSPTQSPAP 772
GPQ Q + Y+ P + +P A QM P P + P
Sbjct: 796 YGPQGGQYGPQGGYPRQPNYNALPNANYPSAGMAGGINPMGAGGQMHGQPGIPPYGTLPP 855
Query: 773 SPVTSLSSVCTGLSPLPVLTQFPRPGGPAQGDGRYSLLGQPLQYNLSICPP 823
++ S RP GP ++ P Q +CPP
Sbjct: 856 GRMSHAS-------------MGNRPYGP-------NMANMPPQVGSGMCPP 886
Score = 37.4 bits (85), Expect = 0.069
Identities = 78/323 (24%), Positives = 100/323 (30%), Gaps = 36/323 (11%)
Query: 487 PTSNYSTSSHAPPTQQVLPPQGYMQPPQQIQVSYYPPGQYPNSNQQYRPLSHPVAYSPQR 546
P N ST + P P G Y P +YP QQ + H +
Sbjct: 1296 PEGNMSTGAPQPNLMPSNPDSGM-----------YSPSRYPPQQQQQQQQRHDSYGNQFS 1344
Query: 547 GQQLPQPSQQPGLQPMMPNQQQAAYQ----GMIGVQQPQNQGLLSSQRSSMGGQMQGLVV 602
Q P S P Q M QQQ Y+ G G +++G + S S G QG
Sbjct: 1345 TQGTPSGSPFPSQQTTMYQQQQQNYKRPMDGTYGPPAKRHEGEMYSVPYSTG---QG-QP 1400
Query: 603 QYTPLPSYQVPVGSDSQNVVQPPFQQPMLVPVSQSVQGGLPAAGVPVYYSMIPPAQQNGT 662
Q LP Q P + Q QP QQ V PA QN
Sbjct: 1401 QQQQLPPAQ-PQPASQQQAAQPSPQQ----DVYNQYGNAYPATATAATERRPAGGPQNQF 1455
Query: 663 SPSVG---FLQPPGSEQYQMPQSPSPCSPPQMPQQYSGVSPSGPGVVVMQLNVPNGP--- 716
G PPG+ Q P Q + + G M N N
Sbjct: 1456 PFQFGRDRVSAPPGTNAQQNMPPQMMGGPIQASAEVAQQGTMWQGRNDMTYNYANRQSTG 1515
Query: 717 QPPQNPSMVQWSHC-KYYSMDQRGQKPGDLYSPDS-SPQANTQMSSSPVTSPTQSPAPSP 774
PQ P+ + + DQR G S + P P+T P S P
Sbjct: 1516 SAPQGPAYHGVNRTDEMLHTDQRANHEGSWPSHGTRQPPYGPSAPVPPMTRPPPSNYQPP 1575
Query: 775 VTSLSSVCTGLSPLPVLTQFPRP 797
+ + + SP P+ PRP
Sbjct: 1576 PSMQNHIPQVSSPAPL----PRP 1594
Score = 35.4 bits (80), Expect = 0.26
Identities = 76/348 (21%), Positives = 116/348 (33%), Gaps = 26/348 (7%)
Query: 441 PFGQMSLSR-QGSTEAADPSAALFQTPLIS-QHPQQTSFIMASTGQPLPTSNYSTSSHAP 498
P G MS Q + ++P + ++ Q QQ S G T + S P
Sbjct: 1296 PEGNMSTGAPQPNLMPSNPDSGMYSPSRYPPQQQQQQQQRHDSYGNQFSTQGTPSGSPFP 1355
Query: 499 PTQQVLPPQGYMQPPQQIQVSYYPPGQYPNSNQQYRPLSHPVAYSPQRGQ----QLPQPS 554
Q + Q + + +Y PP + ++ + V YS +GQ QLP
Sbjct: 1356 SQQTTMYQQQQQNYKRPMDGTYGPPAK------RHEGEMYSVPYSTGQGQPQQQQLPPAQ 1409
Query: 555 QQPGLQPM--MPNQQQAAYQGMIGVQQPQNQGLLSSQRSSMGGQMQGLVVQYTPLPSYQV 612
QP Q P+ QQ Y G P +++R GG Q+
Sbjct: 1410 PQPASQQQAAQPSPQQDVY-NQYGNAYPAT-ATAATERRPAGGPQNQFPFQF-GRDRVSA 1466
Query: 613 PVGSDSQNVVQPPFQQPMLVPVSQSVQGGLPAAGVPVYYSMIPPAQQNGTSPSVGFLQPP 672
P G+++Q + P + ++ Q G G Q G++P
Sbjct: 1467 PPGTNAQQNMPPQMMGGPIQASAEVAQQGTMWQGRNDMTYNYANRQSTGSAPQGPAYHGV 1526
Query: 673 GSEQYQMPQSPSPCSPPQMPQQYSGVSPSGPGVVV--MQLNVPNGPQPPQNPSMVQWSHC 730
+ P + P GP V M P+ QPP PSM +H
Sbjct: 1527 NRTDEMLHTDQRANHEGSWPSHGTRQPPYGPSAPVPPMTRPPPSNYQPP--PSM--QNHI 1582
Query: 731 KYYSMDQRGQKP-GDLYSPDSSP--QANTQMSSSPVTSPTQSPAPSPV 775
S +P + SP SP + +M + P AP+PV
Sbjct: 1583 PQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPPVPASHIAPAPV 1630
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 59.3 bits (142), Expect = 2e-08
Identities = 119/471 (25%), Positives = 158/471 (33%), Gaps = 66/471 (14%)
Query: 383 PEVCNQVTSSQSVRGLLPCTAQQQQQQQQQQLP--ALPP--TPQQQPPLNNHMISQADDL 438
P Q S +G P QQ QQQQ P PP TP QP SQ L
Sbjct: 452 PPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQL 511
Query: 439 SNPFGQMSLSRQGSTEAADPSAALF--QTPLISQHPQ-QTSFIMASTGQPLPTSNYSTSS 495
+ Q S+Q S S A + Q QHPQ Q + P +
Sbjct: 512 QS--SQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPA 569
Query: 496 HAPPTQQVLPPQGYMQPPQQI---QVSYYPPGQYPNSNQQYRPLSHPVAYSPQRGQQLPQ 552
+ +QQ PQ Q QQ Q + PP + + + S P S + GQ+
Sbjct: 570 PSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQEDMN 629
Query: 553 PSQQ--PGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSSQRSSMGGQMQGLVVQYTPLPSY 610
S Q P P + G G P G+ +S SS G+ Q P S
Sbjct: 630 LSLQSRPSSLPDLSGSIDDLPMGTEGALSP---GVSTSGISSSQGE------QSNPAQSP 680
Query: 611 QVPVGSDSQNVVQPPFQQPMLVP--VSQSVQGGLPAAGVPVYYSMIPPAQQNGTSPSV-- 666
P S ++ P P+ P V+QS G L A VP + +PP +G S S+
Sbjct: 681 FSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVP--GNQMPPRPPSGQSDSIMH 738
Query: 667 ------------GFLQ-PPGSEQYQMPQSPSPCSPPQMPQQYSGVSPSGPGVVVMQLNVP 713
G++Q P QY PQ S SP Q G +G G
Sbjct: 739 PSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSP---RQPSGGQIHTGMGSYQQNSMGS 795
Query: 714 NGPQPPQNPSMVQWSHCKYYSMDQRGQKPGDLYSPDSSPQ-ANTQMSSSPVTSPTQSPAP 772
GPQ Q + Y+ P + +P A QM P P + P
Sbjct: 796 YGPQGGQYGPQGGYPRQPNYNALPNANYPSAGMAGGINPMGAGGQMHGQPGIPPYGTLPP 855
Query: 773 SPVTSLSSVCTGLSPLPVLTQFPRPGGPAQGDGRYSLLGQPLQYNLSICPP 823
++ S RP GP ++ P Q +CPP
Sbjct: 856 GRMSHAS-------------MGNRPYGP-------NMANMPPQVGSGMCPP 886
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 58.9 bits (141), Expect = 2e-08
Identities = 118/493 (23%), Positives = 158/493 (32%), Gaps = 87/493 (17%)
Query: 341 RPPVTKASSFSGISILTRGDSIGSSKGGSAGRISR----PGMALGAPEVCNQVTSSQSVR 396
R T+A S +S R D+ G + G + ++R G +G P
Sbjct: 135 RGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTE 194
Query: 397 GLLPCTAQQQQQQQQQQLPALPPTPQQ----QPPLNNHMISQADDLSNPFGQMSLSRQGS 452
G + + + PA P Q P + + S A LS+P +R
Sbjct: 195 GPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTP 254
Query: 453 TEAADPSAALFQTPLISQHPQQTS---------FIMASTGQPLPTSNYSTSSHAPPTQQV 503
A PS + + PQ T ++S+ P+ + S APP+ Q
Sbjct: 255 RAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQT 314
Query: 504 LPPQGYMQPPQQIQVSYYPPGQYPNSNQQYRPLSHPVAYSPQRGQQLPQPS-QQPGLQPM 562
LP P Q P Q +S PLS PQ L P Q P P
Sbjct: 315 LPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPA 374
Query: 563 MPNQQQAAYQGMIGVQQPQNQGLLSSQRSSMGGQMQGLVVQYTPLPSYQVPVGSDSQNVV 622
P A PS Q P + + +++
Sbjct: 375 SPPLSPLA------------------------------------TPSPQAP-NALAVHLL 397
Query: 623 QPPFQQPMLVPVSQSVQGGLPAAGVPVYYSMIPPAQQNGTSPSVGF--LQPPGSEQYQMP 680
Q PF P PV P A PV S PP+Q PS+ LQ P S P
Sbjct: 398 QAPFSPPPSPPVQAPFS---PPASPPVSPSATPPSQ---APPSLAAPPLQVPPSPPASPP 451
Query: 681 QSPSPCSPPQMPQ-------QYSGVSPSGPGVVVMQLNVPNGPQPPQN-PSMVQWSHCKY 732
SPS PPQ P Q + P P + + P PP + P +S
Sbjct: 452 MSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATP-PLQALPSPPASFPGQAPFSPSAS 510
Query: 733 YSMDQRGQKPGDLYSPDSSPQANTQMSSSPVTSPT-----QSPAPSPVTSLSSVCTGLSP 787
M P +P Q+ SP SPT + P P P TS+S
Sbjct: 511 LPMSPLATPPPQ--APPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSG------- 561
Query: 788 LPVLTQFPRPGGP 800
P LT PG P
Sbjct: 562 -PRLTLALAPGPP 573
Score = 52.8 bits (125), Expect = 2e-06
Identities = 109/491 (22%), Positives = 161/491 (32%), Gaps = 69/491 (14%)
Query: 335 GSVRSMRPPVTKASSFSGISILTRGDSIGSSKGGSAGRISRPGMALGA--PEVCNQ---- 388
G R+ RPP + RG+ +K S G +S PG A G P Q
Sbjct: 78 GPTRTSRPPASG-----------RGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLR 126
Query: 389 VTSSQSV-RGLLPCTAQQQQQQQQQQLPALPPTP-QQQPPLNNHMISQADDLSNPFGQMS 446
+++ ++V RG ++ + PTP P + + ++ P S
Sbjct: 127 ISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPS 186
Query: 447 LSRQGSTE-------AADPSAALFQTPLISQHPQQTSFIMASTGQPLPTSNYSTSSHA-- 497
+ TE +A + +P + P + + L +S SS A
Sbjct: 187 ARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARS 246
Query: 498 -PPTQQVLPPQGYMQPPQQIQVSYYPPGQYPNSNQQYRPLSHPVAYSP---QRGQQLPQP 553
P + + P+ + P Q + P P++ SP P P
Sbjct: 247 GPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSP 306
Query: 554 SQQPGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSSQRSSMGGQMQGLVVQYTPLPSYQVP 613
S P LQ + Q + P Q S S PL P
Sbjct: 307 SAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPS-------------PPLSPLATP 353
Query: 614 VGSDSQNVVQPPFQQPMLVPVSQSVQGGLPAAGVPVYYSMIPPAQQNGTSPSVGFLQ--- 670
+ PP Q P P S P + P+ Q + +V LQ
Sbjct: 354 PPQAPPALALPPLQAPPSPPAS------------PPLSPLATPSPQAPNALAVHLLQAPF 401
Query: 671 -PPGSEQYQMPQSPSPCSPPQMPQQYSGVSPSGPGVVVMQLNVPNGPQPPQNPSMVQWSH 729
PP S Q P SP P SPP P + S + P + L VP P PP +P M +
Sbjct: 402 SPPPSPPVQAPFSP-PASPPVSPSA-TPPSQAPPSLAAPPLQVP--PSPPASPPMSPSAT 457
Query: 730 CKYYSMDQRGQKPGDLYSPDSSPQANTQMSSSPVTSPTQSPAPSPVTSLSSVCTGLSPLP 789
+ P L P PQA +++ P+ + PA P + S L P
Sbjct: 458 PPPQAPPPLAAPPLQLAKP--PPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSP 515
Query: 790 VLTQFPRPGGP 800
+ T P P P
Sbjct: 516 LAT--PPPQAP 524
Score = 40.8 bits (94), Expect = 0.006
Identities = 66/262 (25%), Positives = 87/262 (33%), Gaps = 35/262 (13%)
Query: 576 GVQQPQNQGLLSSQRSSMGGQMQGLVVQYTPL----PSYQVPVGSDSQNVVQ--PPFQQ- 628
G+Q+P ++ L SS G + TP PS P G + Q PP +
Sbjct: 224 GLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDA 283
Query: 629 -PMLVPVSQSV-----QGGLPAAGVPVYYSMIP-----PAQQNGTSPSVGFLQPPGSEQY 677
P L P+S S P+ P +P P Q TS LQ S
Sbjct: 284 APALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLP 343
Query: 678 QMPQSPSPCSPPQMPQQYSGVSPSGPGVVVMQLNVPNGP--QPPQNPSMVQWSHCKYYSM 735
P SP PPQ P P + + L P P PP +P
Sbjct: 344 SPPLSPLATPPPQAP----------PALALPPLQAPPSPPASPPLSPLATPSPQAPNALA 393
Query: 736 DQRGQKPGDLYSPDSSPQANTQMS--SSPVTSPTQSPAPSPVTSLSSVCTGLSPLPVLTQ 793
Q P +SP SP S +SP SP+ +P SL++ + P P +
Sbjct: 394 VHLLQAP---FSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASP 450
Query: 794 FPRPGGPAQGDGRYSLLGQPLQ 815
P L PLQ
Sbjct: 451 PMSPSATPPPQAPPPLAAPPLQ 472
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 58.9 bits (141), Expect = 2e-08
Identities = 98/402 (24%), Positives = 138/402 (34%), Gaps = 50/402 (12%)
Query: 409 QQQQQLPAL-----PPTPQQQPPLNNHMISQADDLSNPFGQMSLSRQGSTEAADPSAALF 463
QQ QQ PA PP PQQ PP Q P M + +++ P
Sbjct: 744 QQMQQAPAPVPQQPPPPPQQPPPPPPPQQQQQPPPPPPPPSMPQQAAPAMKSSPPPFIAT 803
Query: 464 QTPLISQHPQQTSFIMASTGQPLPTSNYSTSSHAPPTQQVLPPQGYMQPPQQIQVSYYPP 523
Q P++ PQ + G + PP + P + PP Q + P
Sbjct: 804 QVPVL--EPQLPGSVFDPIGHFTQPILHLPQPELPP--HLPQPPEHSTPPHLNQHAVVSP 859
Query: 524 GQYPNS--NQQYRPLSHPVAYSPQRGQQLPQPSQQPGL--QPMMPNQQQA-AYQGMIGVQ 578
N+ Q RP + A P+ + P+ P L P++P A Q ++ +
Sbjct: 860 PALHNALPQQPSRPSNRAAALPPKPAR---PPAVSPALTQTPLLPQPPMAQPPQVLLEDE 916
Query: 579 QPQNQGLLSSQRSSMGGQMQGLVVQYTPLPSYQVPVGSDSQNVVQPPFQQPMLVPVSQSV 638
+P L S Q Q+Q + LPS +V Q+ PP P V Q +
Sbjct: 917 EPPAPPLTSMQMQLYLQQLQKVQPPTPLLPSVKV------QSQPPPPLPPPPHPSVQQQL 970
Query: 639 QGGLPAAGVPVYYSMIPPAQQNGTSPSVGFLQP-PGSEQYQMPQSPSPCSPPQMPQQYSG 697
Q P P PP QQ+ P LQP S Q P P PP P
Sbjct: 971 QQQPPPPPPP--QPQPPPQQQHQPPPRPVHLQPMQFSTHIQQPPPPQGQQPPHPP----- 1023
Query: 698 VSPSGPGVVVMQLNVPNGPQPPQNPSMVQWSHCKY------YSMDQRGQKPGDLYSPDSS 751
PG P PQP + ++Q H YS + P L S
Sbjct: 1024 -----PG------QQPPPPQPAKPQQVIQHHHSPRHHKSDPYSTGHLREAPSPLMI--HS 1070
Query: 752 PQANTQMSSSPVTSPTQSPAPSPVTSLSSVCTGLSPLPVLTQ 793
PQ + S + + P Q+ P ++ PL V+ +
Sbjct: 1071 PQMSQFQSLTHQSPPQQNVQPKKQELRAASVVQPQPLVVVKE 1112
Score = 49.3 bits (116), Expect = 2e-05
Identities = 70/296 (23%), Positives = 97/296 (32%), Gaps = 64/296 (21%)
Query: 392 SQSVRGLLPCTAQQQQQQQQQQLPALPPTPQQQPPLNNHMISQADDLSNPFGQMSLSRQG 451
SQ L P QQQ QQQ P PP Q PP H
Sbjct: 952 SQPPPPLPPPPHPSVQQQLQQQPPPPPPPQPQPPPQQQHQ-------------------- 991
Query: 452 STEAADPSAALFQTPLISQHPQQTSFIMASTGQPLPTSNYSTSSHAPPTQQVLPPQGYMQ 511
P Q S H QQ P H PP QQ PPQ
Sbjct: 992 ----PPPRPVHLQPMQFSTHIQQP-----------PPPQGQQPPHPPPGQQPPPPQ--PA 1034
Query: 512 PPQQIQVSYYPPGQY---PNSNQQYRPLSHP-VAYSPQRGQQLPQPSQQPGLQPMMPNQQ 567
PQQ+ ++ P + P S R P + +SPQ Q Q P Q + P +Q
Sbjct: 1035 KPQQVIQHHHSPRHHKSDPYSTGHLREAPSPLMIHSPQMSQFQSLTHQSPPQQNVQPKKQ 1094
Query: 568 QAAYQGMIGVQQPQNQGLLSSQRSSMGGQMQGLVVQYTPLPSYQVPVGSDSQNVVQPPFQ 627
+ ++ QPQ ++ ++ + +++ P P ++ P
Sbjct: 1095 ELRAASVV---QPQPLVVVKEEK------IHSPIIRSEPFSPSLRPEPPKHPESIKAPVH 1145
Query: 628 QPMLVPVSQSVQGGLPAAGVPVYYSMIPPAQQNGTSPSVGFLQPPGSEQYQMPQSP 683
P P + V G P +I P +QN P P +Q Q P++P
Sbjct: 1146 LPQR-PEMKPVDVGRP---------VIRPPEQNAPPPGA----PDKDKQKQEPKTP 1187
Score = 36.6 bits (83), Expect = 0.12
Identities = 48/177 (27%), Positives = 62/177 (35%), Gaps = 40/177 (22%)
Query: 645 AGVPVYYSMIPPAQQNGTSPSVGFLQPPGSEQYQMPQSPSPCSPPQMPQQYSGVSPSGP- 703
A PV PP QQ PP +Q Q P P P PP MPQQ + S P
Sbjct: 749 APAPVPQQPPPPPQQPPP--------PPPPQQQQQPPPPPP--PPSMPQQAAPAMKSSPP 798
Query: 704 -----GVVVMQLNVPNG---------------PQPPQNPSMVQ-WSHCKYYSMDQRGQKP 742
V V++ +P PQP P + Q H ++Q
Sbjct: 799 PFIATQVPVLEPQLPGSVFDPIGHFTQPILHLPQPELPPHLPQPPEHSTPPHLNQHA--- 855
Query: 743 GDLYSPDSSPQANTQMSSSP---VTSPTQSPAPSPVTSLSSVCTGLSPLPVLTQFPR 796
+ SP + A Q S P + PA P S + T L P P + Q P+
Sbjct: 856 --VVSPPALHNALPQQPSRPSNRAAALPPKPARPPAVSPALTQTPLLPQPPMAQPPQ 910
Score = 33.5 bits (75), Expect = 1.00
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 404 QQQQQQQQQQLPALPPTPQQQPPLNNHMISQADDLSNPFGQMSLSRQGSTEAADPSAALF 463
QQQQQQQQ A TPQ Q M+ Q +L+ Q R+ D + F
Sbjct: 1293 QQQQQQQQAAAVAAAATPQAQSSQPQSMLDQQRELARKREQERRRREAMAATIDMN---F 1349
Query: 464 QTPLIS 469
Q+ L+S
Sbjct: 1350 QSDLLS 1355
Score = 32.0 bits (71), Expect = 2.9
Identities = 24/88 (27%), Positives = 33/88 (37%), Gaps = 4/88 (4%)
Query: 458 PSAALFQTPLISQHPQQTSFIMASTGQPLPTSNYSTSSHAPPTQQVLPPQGYMQPPQQIQ 517
P+ TP +Q PQ + +T P P P V+PPQ PP
Sbjct: 197 PNTTQASTPPQTQTPQPNPPPVQATPHPFPAVTPDLIVQTP-VMTVVPPQPLQTPPPVPP 255
Query: 518 VSYYPPGQYPNSNQQYRPLSHPVAYSPQ 545
PP P Q + P+ +A +PQ
Sbjct: 256 QPQPPPAPAPQPVQSHPPI---IAATPQ 280
>gi|151301053 RNA binding motif protein 33 [Homo sapiens]
Length = 1170
Score = 58.9 bits (141), Expect = 2e-08
Identities = 85/310 (27%), Positives = 109/310 (35%), Gaps = 61/310 (19%)
Query: 400 PCTAQQQQQQQQQQLPALPPTPQQQPPLNNHMISQADDLSNPFGQMSLSRQGSTEAADPS 459
P A QQ QQ P P QPP P G + S+ GS
Sbjct: 509 PGPAFNQQGQQPVFPRERPVRPALQPP-------------GPVGILHFSQPGSATTR--- 552
Query: 460 AALFQTPLISQHPQQTSFIMASTGQP-LPTS---NYSTSSHAP--PTQQVLPPQGYMQPP 513
P I P+Q + GQP LPT N H P P Q P Q QPP
Sbjct: 553 ------PFIP--PRQP--FLPGPGQPFLPTHTQPNLQGPLHPPLPPPHQPQPQQPQQQPP 602
Query: 514 QQIQVSYYPPGQYPNSNQQYRPLSHPVAYSPQRGQ-------QLPQPSQQPGLQPMM-PN 565
Q Q + PP Q P +Q P HP + PQ +P P P QP P+
Sbjct: 603 PQHQPPHQPPHQPPPQHQP--PPQHPPQHPPQHQHHHHHHHLSVPPPPLMPMSQPQFRPH 660
Query: 566 QQQAAYQGMIG-VQQPQNQGLLSSQRSSMGGQMQGLVVQYTPLPSYQVPVGSDSQNVVQP 624
Q A Q +Q PQ QGL + S V P+ Q P + N+ +
Sbjct: 661 VQTAQPQASSSRMQCPQRQGLRHNTTSQN--------VSKRPMQQMQ-PTAPRNSNLREL 711
Query: 625 PFQQPMLVPVSQSVQGGLPAAGVPVYYSMIPPAQQNGTSPSVGFLQPPGSEQYQMPQSPS 684
P ++ +S S P+A V S PP++ S S Q +
Sbjct: 712 PIAPSHVIEMSSSRCSATPSAQVKPIVSASPPSRAVAGS---------RSSQGKTEVKVK 762
Query: 685 PCSPPQMPQQ 694
P SP P++
Sbjct: 763 PASPVAQPKE 772
Score = 45.1 bits (105), Expect = 3e-04
Identities = 105/445 (23%), Positives = 142/445 (31%), Gaps = 60/445 (13%)
Query: 364 SSKGGSAGRISRPGMALGAPEVCNQVTSSQSVRGLLPCTAQQQQQQQQQQLPALPPTPQQ 423
SS+ G GR P M G + + T ++ P Q Q P PP PQQ
Sbjct: 272 SSRRG--GRRGGPLMCRGVGDQRRESTERGRMKDHRPALLPTQPPVVPQAPPPPPPPPQQ 329
Query: 424 QP--------PLNNHMISQADDLSNPFGQMSLSRQGSTEAADPSAALFQTPLISQHPQQT 475
QP PL + Q +P M + Q T P + P+ Q P+
Sbjct: 330 QPIRSLFQPQPLQPLLPVQHPHHPSPPQGMHMPPQLET----PRMMMTPPPVTPQQPKNI 385
Query: 476 SFIMASTGQPLPTSNYSTSSHAPPTQQVLPPQGYMQPPQQIQVSYYPPGQYPNSNQQYRP 535
G + + + PQ + PP+ Q + PG PNS Q
Sbjct: 386 HINPHFKGTVVTPVQVPLLPVPSQPRPAVGPQRFPGPPEFPQ---HTPGPVPNSFSQ--- 439
Query: 536 LSHPVAYSPQRGQQLPQPSQQPGLQPMMPNQQQAAYQGMIGVQQPQNQGLLSSQRSSMGG 595
P R P Q P P + + G+ G + + L +
Sbjct: 440 --------PPR-----LPLQDQWRAPPPPQDRDPFFLGVSGEPRFPSHLFLEQRSPPPPP 486
Query: 596 QMQGLVVQYTPLPS-----YQVPVGSDSQNVVQPPFQQPMLVPVSQSVQGGLPAA----- 645
L+ P+P+ + P + +Q QP F P PV ++Q P
Sbjct: 487 PPPTLLNSSHPVPTQSPLPFTQPGPAFNQQGQQPVF--PRERPVRPALQPPGPVGILHFS 544
Query: 646 --GVPVYYSMIPPAQQNGTSPSVGFL---QPPGSEQYQMPQSPSPCSP-PQMPQQYSGVS 699
G IPP Q P FL P + P P P P PQ PQQ
Sbjct: 545 QPGSATTRPFIPPRQPFLPGPGQPFLPTHTQPNLQGPLHPPLPPPHQPQPQQPQQQPPPQ 604
Query: 700 PSGPGVVVMQLNVPNGPQPPQNPSMVQWSHCKYYSMDQRGQKPGDLYSPDSSPQ------ 753
P Q P PPQ+P H ++ P L P S PQ
Sbjct: 605 HQPPHQPPHQ-PPPQHQPPPQHPPQHPPQHQHHHHHHHLSVPPPPL-MPMSQPQFRPHVQ 662
Query: 754 -ANTQMSSSPVTSPTQSPAPSPVTS 777
A Q SSS + P + TS
Sbjct: 663 TAQPQASSSRMQCPQRQGLRHNTTS 687
Score = 31.6 bits (70), Expect = 3.8
Identities = 33/132 (25%), Positives = 46/132 (34%), Gaps = 21/132 (15%)
Query: 670 QPPGSEQYQMPQSPSPCSPPQMPQQYSGVSPSGPGVVVMQLNVPNGPQPPQNPSMVQWSH 729
QPP +PQ+P P PP Q + P ++ + P+ P PPQ M
Sbjct: 312 QPP-----VVPQAPPPPPPPPQQQPIRSLFQPQPLQPLLPVQHPHHPSPPQGMHMPPQLE 366
Query: 730 CKYYSMDQRGQKPGDLYSPDSSPQANTQMSSSP-----VTSPTQSPAPSPVTSLSSVCTG 784
M P +PQ + +P V +P Q P PV S G
Sbjct: 367 TPRMMMT----------PPPVTPQQPKNIHINPHFKGTVVTPVQVPL-LPVPSQPRPAVG 415
Query: 785 LSPLPVLTQFPR 796
P +FP+
Sbjct: 416 PQRFPGPPEFPQ 427
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.127 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,075,342
Number of Sequences: 37866
Number of extensions: 2534282
Number of successful extensions: 21397
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 983
Number of HSP's that attempted gapping in prelim test: 13834
Number of HSP's gapped (non-prelim): 5489
length of query: 976
length of database: 18,247,518
effective HSP length: 112
effective length of query: 864
effective length of database: 14,006,526
effective search space: 12101638464
effective search space used: 12101638464
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.