Guide to the Human Genome
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Name: PPM1H Sequence: fasta or formatted (514aa) NCBI GI: 149944715
Description:

protein phosphatase 1H (PP2C domain containing)

Referenced in:

Serine / Threonine Protein Phosphatases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         37           2
 C cysteine            1.8          9           1
 D aspartate           5.6         29           2
 E glutamate           7.0         36           2
 F phenylalanine       2.9         15           2
 G glycine             8.9         46           3
 H histidine           2.9         15           2
 I isoleucine          6.0         31           3
 K lysine              4.9         25           3
 L leucine            10.1         52           2
 M methionine          1.9         10           1
 N asparagine          3.9         20           1
 P proline             5.3         27           2
 Q glutamine           2.5         13           1
 R arginine            6.4         33           2
 S serine              8.4         43           2
 T threonine           5.1         26           1
 V valine              5.4         28           2
 W tryptophan          1.0          5           1
 Y tyrosine            2.7         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein phosphatase 1H (PP2C domain containing) [Ho... 
PPM1J                 0.472   protein phosphatase 1J (PP2C domain containing) [Hom...
PPM1M                 0.273   protein phosphatase 1M isoform a 
PPM1M                 0.244   protein phosphatase 1M isoform b 
PPM1B                 0.034   protein phosphatase 1B isoform 5 
PPM1B                 0.034   protein phosphatase 1B isoform 4 
PPM1B                 0.034   protein phosphatase 1B isoform 2 
PPM1B                 0.034   protein phosphatase 1B isoform 1 
PPM1F                 0.032   protein phosphatase 1F 
PPM1L                 0.029   protein phosphatase 1 (formerly 2C)-like 
PPM1A                 0.025   protein phosphatase 1A isoform 1 
PPM1A                 0.025   protein phosphatase 1A isoform 2 
PPM1A                 0.025   protein phosphatase 1A isoform 3 
PDP1                  0.025   pyruvate dehyrogenase phosphatase catalytic subunit ...
PDP1                  0.025   pyruvate dehyrogenase phosphatase catalytic subunit...
PDP1                  0.025   pyruvate dehyrogenase phosphatase catalytic subunit...
PDP1                  0.025   pyruvate dehyrogenase phosphatase catalytic subunit...
PDP1                  0.025   pyruvate dehyrogenase phosphatase catalytic subunit...
PPM1G                 0.024   protein phosphatase 1G 
PPM1G                 0.024   protein phosphatase 1G 
PDP2                  0.023   pyruvate dehydrogenase phosphatase isoenzyme 2 [Homo...
ILKAP                 0.021   integrin-linked kinase-associated protein phosphatas...
FLJ40125              0.020   protein phosphatase 1B-like 
PPM1E                 0.018   protein phosphatase 1E 
PPM1K                 0.017   protein phosphatase 1K (PP2C domain containing) [Ho...
MAP3K7IP1             0.012   mitogen-activated protein kinase kinase kinase 7 inte...
MAP3K7IP1             0.012   mitogen-activated protein kinase kinase kinase 7 int...
BAT3                  0.009   HLA-B associated transcript-3 isoform b 
BAT3                  0.009   HLA-B associated transcript-3 isoform b 
BAT3                  0.009   HLA-B associated transcript-3 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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