Guide to the Human Genome
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Name: PPM1J Sequence: fasta or formatted (505aa) NCBI GI: 65506328
Description:

protein phosphatase 1J (PP2C domain containing)

Referenced in:

Serine / Threonine Protein Phosphatases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         44           3
 C cysteine            2.4         12           2
 D aspartate           5.1         26           2
 E glutamate           6.1         31           1
 F phenylalanine       2.6         13           1
 G glycine             9.3         47           3
 H histidine           2.6         13           1
 I isoleucine          2.6         13           2
 K lysine              3.2         16           2
 L leucine            10.1         51           2
 M methionine          1.6          8           1
 N asparagine          2.2         11           2
 P proline             8.7         44           3
 Q glutamine           3.4         17           1
 R arginine            8.1         41           2
 S serine              7.7         39           2
 T threonine           4.4         22           2
 V valine              7.5         38           2
 W tryptophan          1.2          6           1
 Y tyrosine            2.6         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein phosphatase 1J (PP2C domain containing) [Hom... 
PPM1H                 0.474   protein phosphatase 1H (PP2C domain containing) [Ho...
PPM1M                 0.240   protein phosphatase 1M isoform a 
PPM1M                 0.217   protein phosphatase 1M isoform b 
PPM1B                 0.028   protein phosphatase 1B isoform 5 
PPM1B                 0.028   protein phosphatase 1B isoform 4 
PPM1B                 0.028   protein phosphatase 1B isoform 2 
PPM1B                 0.028   protein phosphatase 1B isoform 1 
PPM1F                 0.027   protein phosphatase 1F 
PPM1G                 0.026   protein phosphatase 1G 
PPM1G                 0.026   protein phosphatase 1G 
FLJ40125              0.025   protein phosphatase 1B-like 
PDP2                  0.025   pyruvate dehydrogenase phosphatase isoenzyme 2 [Homo...
PPM1A                 0.017   protein phosphatase 1A isoform 1 
PPM1A                 0.017   protein phosphatase 1A isoform 2 
PPM1A                 0.017   protein phosphatase 1A isoform 3 
LMTK3                 0.017   lemur tyrosine kinase 3 
FMNL1                 0.017   formin-like 1 
PPM1E                 0.016   protein phosphatase 1E 
ILKAP                 0.016   integrin-linked kinase-associated protein phosphatas...
C6orf132              0.016   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.016   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.016   PREDICTED: hypothetical protein LOC647024 
LOC100132234          0.015   PREDICTED: hypothetical protein LOC100132234 
LOC100132234          0.015   PREDICTED: hypothetical protein LOC100132234 
TACC2                 0.015   transforming, acidic coiled-coil containing protein...
SOX9                  0.014   transcription factor SOX9 
LOC100132234          0.014   PREDICTED: hypothetical protein LOC100132234 
SYNJ1                 0.014   synaptojanin 1 isoform c 
PCLO                  0.014   piccolo isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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