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Search of human proteins with 149588928
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|149588928 SLAIN motif family, member 2 [Homo sapiens]
(581 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|149588928 SLAIN motif family, member 2 [Homo sapiens] 1157 0.0
gi|93141208 SLAIN motif family, member 1 A [Homo sapiens] 191 1e-48
gi|21389389 SLAIN motif family, member 1 B [Homo sapiens] 154 2e-37
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 56 1e-07
gi|32307128 nuclear receptor coactivator 6 [Homo sapiens] 54 4e-07
gi|15529996 son of sevenless homolog 1 [Homo sapiens] 53 9e-07
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 51 3e-06
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 51 3e-06
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 51 3e-06
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 51 3e-06
gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi... 50 6e-06
gi|150170670 piccolo isoform 2 [Homo sapiens] 49 1e-05
gi|150378539 piccolo isoform 1 [Homo sapiens] 49 1e-05
gi|33667044 ABI gene family, member 3 (NESH) binding protein [Ho... 49 1e-05
gi|33946327 nucleoporin 214kDa [Homo sapiens] 49 2e-05
gi|92091572 dedicator of cytokinesis 4 [Homo sapiens] 48 3e-05
gi|163965366 nascent polypeptide-associated complex alpha subuni... 47 4e-05
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 47 5e-05
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 47 5e-05
gi|50659104 RAB11 family interacting protein 1 isoform 3 [Homo s... 47 5e-05
gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens] 47 5e-05
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 47 6e-05
gi|253970412 G-2 and S-phase expressed 1 [Homo sapiens] 46 8e-05
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 46 8e-05
gi|85815829 SH3-domain binding protein 1 [Homo sapiens] 46 8e-05
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 46 1e-04
gi|222418649 mucin 7, secreted precursor [Homo sapiens] 46 1e-04
gi|222418645 mucin 7, secreted precursor [Homo sapiens] 46 1e-04
gi|122937492 SET domain containing 5 [Homo sapiens] 46 1e-04
gi|73858559 proline/serine-rich coiled-coil 1 isoform c [Homo sa... 45 1e-04
>gi|149588928 SLAIN motif family, member 2 [Homo sapiens]
Length = 581
Score = 1157 bits (2993), Expect = 0.0
Identities = 581/581 (100%), Positives = 581/581 (100%)
Query: 1 MEDVNSNVNADQEVRKLQELVKKLEKQNEQLRSRSGAVQGAGSLGPGSPVRAGASIPSSG 60
MEDVNSNVNADQEVRKLQELVKKLEKQNEQLRSRSGAVQGAGSLGPGSPVRAGASIPSSG
Sbjct: 1 MEDVNSNVNADQEVRKLQELVKKLEKQNEQLRSRSGAVQGAGSLGPGSPVRAGASIPSSG 60
Query: 61 AASPRGFPLGLSAKSGGGPGSGPRRTSSEELRDATSLLAAGEGGLLDEVEPLRPDELERL 120
AASPRGFPLGLSAKSGGGPGSGPRRTSSEELRDATSLLAAGEGGLLDEVEPLRPDELERL
Sbjct: 61 AASPRGFPLGLSAKSGGGPGSGPRRTSSEELRDATSLLAAGEGGLLDEVEPLRPDELERL 120
Query: 121 SGWEEEEESWLYSSPKKKLTPMQKSVSPLVWCRQVLDYPSPDVECAKKSLIHKLDQTMSA 180
SGWEEEEESWLYSSPKKKLTPMQKSVSPLVWCRQVLDYPSPDVECAKKSLIHKLDQTMSA
Sbjct: 121 SGWEEEEESWLYSSPKKKLTPMQKSVSPLVWCRQVLDYPSPDVECAKKSLIHKLDQTMSA 180
Query: 181 LKRQNLYNNPFNSMSYTSPYSPNASSPYSSGFNSPSSTPVRPPIVKQLILPGNSGNLKSS 240
LKRQNLYNNPFNSMSYTSPYSPNASSPYSSGFNSPSSTPVRPPIVKQLILPGNSGNLKSS
Sbjct: 181 LKRQNLYNNPFNSMSYTSPYSPNASSPYSSGFNSPSSTPVRPPIVKQLILPGNSGNLKSS 240
Query: 241 DRNPPLSPQSSIDSELSASELDEDSIGSNYKLNDVTDVQILARMQEESLRQEYAATTSRR 300
DRNPPLSPQSSIDSELSASELDEDSIGSNYKLNDVTDVQILARMQEESLRQEYAATTSRR
Sbjct: 241 DRNPPLSPQSSIDSELSASELDEDSIGSNYKLNDVTDVQILARMQEESLRQEYAATTSRR 300
Query: 301 SSGSSCNSTRRGTFSDQELDAQSLDDEDDNMHHAVYPAVNRFSPSPRNSPRPSPKQSPRN 360
SSGSSCNSTRRGTFSDQELDAQSLDDEDDNMHHAVYPAVNRFSPSPRNSPRPSPKQSPRN
Sbjct: 301 SSGSSCNSTRRGTFSDQELDAQSLDDEDDNMHHAVYPAVNRFSPSPRNSPRPSPKQSPRN 360
Query: 361 SPRSRSPARGIEYSRVSPQPMISRLQQPRLSLQGHPTDLQTSNVKNEEKLRRSLPNLSRT 420
SPRSRSPARGIEYSRVSPQPMISRLQQPRLSLQGHPTDLQTSNVKNEEKLRRSLPNLSRT
Sbjct: 361 SPRSRSPARGIEYSRVSPQPMISRLQQPRLSLQGHPTDLQTSNVKNEEKLRRSLPNLSRT 420
Query: 421 SNTQVDSVKSSRSDSNFQVPNGGIPRMQPQASAIPSPGKFRSPAAPSPLALRQPVKAFSN 480
SNTQVDSVKSSRSDSNFQVPNGGIPRMQPQASAIPSPGKFRSPAAPSPLALRQPVKAFSN
Sbjct: 421 SNTQVDSVKSSRSDSNFQVPNGGIPRMQPQASAIPSPGKFRSPAAPSPLALRQPVKAFSN 480
Query: 481 HGSGSPGSQEITQLTQTTSSPGPPMVQSTVSANPPSNINSATLTRPAGTTAMRSGLPRPS 540
HGSGSPGSQEITQLTQTTSSPGPPMVQSTVSANPPSNINSATLTRPAGTTAMRSGLPRPS
Sbjct: 481 HGSGSPGSQEITQLTQTTSSPGPPMVQSTVSANPPSNINSATLTRPAGTTAMRSGLPRPS 540
Query: 541 APSAGGIPVPRSKLAQPVRRSLPAPKTYGSMKDDSWKDGCY 581
APSAGGIPVPRSKLAQPVRRSLPAPKTYGSMKDDSWKDGCY
Sbjct: 541 APSAGGIPVPRSKLAQPVRRSLPAPKTYGSMKDDSWKDGCY 581
>gi|93141208 SLAIN motif family, member 1 A [Homo sapiens]
Length = 349
Score = 191 bits (486), Expect = 1e-48
Identities = 149/366 (40%), Positives = 192/366 (52%), Gaps = 57/366 (15%)
Query: 240 SDRNPPLSPQSSIDSELSASELDEDSIGSNYKLNDVTDVQILARMQEESLRQEYAATT-- 297
+ R PLSPQSSIDSELS SEL++DSI YKL D+TDVQI+AR+QEESLRQ+YA+T+
Sbjct: 17 TSRGSPLSPQSSIDSELSTSELEDDSISMGYKLQDLTDVQIMARLQEESLRQDYASTSAS 76
Query: 298 -SRRSSGSSCNSTRRGTFSDQELDAQSLDDEDDNMH-HAVYPAVNRFSPSPRNSPRPSPK 355
SR SS S +S ++GT SDQE D SL+DE++ H P + R SP R P
Sbjct: 77 VSRHSSSVSLSSGKKGTCSDQEYDQYSLEDEEEFDHLPPPQPRLPRCSPFQRGIPHSQTF 136
Query: 356 QSPRNSPRSRSPARGIEYSRVSPQPMISRLQQPRLSLQGHPTDLQTSNVKNEEKLRRSLP 415
S R RS S +Y P + QQ S Q D Q N N +KLRRS+P
Sbjct: 137 SSIRECRRSPSS----QYF-----PSNNYQQQQYYSPQAQTPD-QQPNRTNGDKLRRSMP 186
Query: 416 NLSRTSNTQVDS--------VKSSRS-DSNFQVPNGGIPRMQPQASAIPSPGKFR---SP 463
NL+R +T S V++S+S DS+ GI R+Q S IPSPG+ +
Sbjct: 187 NLARMPSTTAISSNISSPVTVRNSQSFDSSLHGAGNGISRIQ---SCIPSPGQLQHRVHS 243
Query: 464 AAPSPLALRQPVKAFSNHGSGSPGSQEI-----TQLTQTTSSPGPPMVQSTVSANPPSNI 518
P+++RQP+KA + GS + QL T P P
Sbjct: 244 VGHFPVSIRQPLKATAYVSPTVQGSSNMPLSNGLQLYSNTGIPTP--------------- 288
Query: 519 NSATLTRPAGTTAMRSGLPRPSAPSAGGIPVPRSKLAQPVRRSLPAPKTYGS---MKDDS 575
N A + G RS LPRPS + G +PRSK+AQPVR L PK S ++D +
Sbjct: 289 NKAAASGIMG----RSALPRPSL-AINGSNLPRSKIAQPVRSFLQPPKPLSSLSTLRDGN 343
Query: 576 WKDGCY 581
W+DGCY
Sbjct: 344 WRDGCY 349
>gi|21389389 SLAIN motif family, member 1 B [Homo sapiens]
Length = 305
Score = 154 bits (389), Expect = 2e-37
Identities = 129/336 (38%), Positives = 169/336 (50%), Gaps = 57/336 (16%)
Query: 270 YKLNDVTDVQILARMQEESLRQEYAATT---SRRSSGSSCNSTRRGTFSDQELDAQSLDD 326
YKL D+TDVQI+AR+QEESLRQ+YA+T+ SR SS S +S ++GT SDQE D SL+D
Sbjct: 3 YKLQDLTDVQIMARLQEESLRQDYASTSASVSRHSSSVSLSSGKKGTCSDQEYDQYSLED 62
Query: 327 EDDNMH-HAVYPAVNRFSPSPRNSPRPSPKQSPRNSPRSRSPARGIEYSRVSPQPMISRL 385
E++ H P + R SP R P S R RS S +Y P +
Sbjct: 63 EEEFDHLPPPQPRLPRCSPFQRGIPHSQTFSSIRECRRSPSS----QYF-----PSNNYQ 113
Query: 386 QQPRLSLQGHPTDLQTSNVKNEEKLRRSLPNLSRTSNTQVDS--------VKSSRS-DSN 436
QQ S Q D Q N N +KLRRS+PNL+R +T S V++S+S DS+
Sbjct: 114 QQQYYSPQAQTPD-QQPNRTNGDKLRRSMPNLARMPSTTAISSNISSPVTVRNSQSFDSS 172
Query: 437 FQVPNGGIPRMQPQASAIPSPGKFR---SPAAPSPLALRQPVKAFSNHGSGSPGSQEI-- 491
GI R+Q S IPSPG+ + P+++RQP+KA + GS +
Sbjct: 173 LHGAGNGISRIQ---SCIPSPGQLQHRVHSVGHFPVSIRQPLKATAYVSPTVQGSSNMPL 229
Query: 492 ---TQLTQTTSSPGPPMVQSTVSANPPSNINSATLTRPAGTTAMRSGLPRPSAPSAGGIP 548
QL T P P N A + G RS LPRPS + G
Sbjct: 230 SNGLQLYSNTGIPTP---------------NKAAASGIMG----RSALPRPSL-AINGSN 269
Query: 549 VPRSKLAQPVRRSLPAPKTYGS---MKDDSWKDGCY 581
+PRSK+AQPVR L PK S ++D +W+DGCY
Sbjct: 270 LPRSKIAQPVRSFLQPPKPLSSLSTLRDGNWRDGCY 305
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 55.8 bits (133), Expect = 1e-07
Identities = 61/239 (25%), Positives = 100/239 (41%), Gaps = 28/239 (11%)
Query: 199 PYSPNASSPYSSGFNSPSSTPVRPPIVKQLILPGNSGNLKSSDRNPPLSPQSSIDSELSA 258
P+S P S+G PS+ P ++ S + SS + S SS S S+
Sbjct: 2502 PHSDVGEPPASTGAQQPSALAALQPAKER-----RSSSSSSSSSSSSSSSSSSSSSSSSS 2556
Query: 259 SELDEDSIGSNYKLNDVTDVQILAR---MQEESLRQ-------------EYAATTSRRSS 302
DS GS+ + ++ + +E++R+ ++++S SS
Sbjct: 2557 GSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSS 2616
Query: 303 GSSCNSTRRGTFSDQELDAQSLDDEDDNMHHAVYPAVNRFSPSPRNSPRP-SPKQSPRNS 361
SS +S+ + S + S + + PA P P+ P+P SPK+ P
Sbjct: 2617 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPA----KPGPQALPKPASPKKPPPGE 2672
Query: 362 PRSRSPARGIEYSRVSPQPMISRLQQPRLSLQGHPTDLQTSNVKNEEKLRRSLPNLSRT 420
RSRSP + I+ R S S +++ R S Q P D Q+S+ +E RR SR+
Sbjct: 2673 RRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSPRDQQSSS--SERGSRRGQRGDSRS 2729
Score = 54.7 bits (130), Expect = 2e-07
Identities = 112/448 (25%), Positives = 173/448 (38%), Gaps = 73/448 (16%)
Query: 182 KRQNLYNNPFNSMSYTSPYSPNASSPYSSGFNSPSSTPVRPPIVKQLILPGNSGNLKSSD 241
+ + L N+P S+ SP S P + N+ S+ V+ L G N +D
Sbjct: 1313 EHKELSNSPLRENSFGSPLEFRNSGPLGTEMNTGFSSEVKED------LNGPFLNQLETD 1366
Query: 242 RNPPLSPQSSIDSELSASELDEDSI-----GSNYKLND-VTDVQILARMQEES------- 288
+ + QS+ S S+SEL D++ SN ++ V D +E S
Sbjct: 1367 PSLDMKEQSTRSSGHSSSELSPDAVEKAGMSSNQSISSPVLDAVPRTPSRERSSSASSPE 1426
Query: 289 LRQEYAATTSRRSSGSSCNSTR--RGTFSDQELDAQSLDDEDDNMHHAVYPAVNRFSPSP 346
++ T SRRS S R GT S L S +D + + SP P
Sbjct: 1427 MKDGLPRTPSRRSRSGSSPGLRDGSGTPSRHSLSGSSPGMKDIPRTPSRGRSECDSSPEP 1486
Query: 347 RNSPR-PSPKQSPRNSP----------RSRSPAR-GIEYSRVSPQPMISR-----LQQPR 389
+ P+ P P+ +SP R RS + ++ V+ P+ R Q+
Sbjct: 1487 KALPQTPRPRSRSPSSPELNNKCLTPQRERSGSESSVDQKTVARTPLGQRSRSGSSQELD 1546
Query: 390 LSLQGHPTDLQTSNVKNEEKLRRSLPNLSRT---SNTQVD-----SVKSSRSDSNFQVPN 441
+ P + S+ + K + P R+ S+ +VD S + SRS S+ +V +
Sbjct: 1547 VKPSASPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKD 1606
Query: 442 GGIPRMQPQASAIPSPGKFRSPAAPSPLAL-RQPVKAFSNHGSG-SPGSQEITQLTQ--- 496
PR P+A + P AP+P AL R+ S+ G G SP T+ +
Sbjct: 1607 K--PRAAPRAQS--GSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHP 1662
Query: 497 ---------TTSSPGPPMVQSTVSANPP---SNINSATLTRPAGTTAMRSGLPRPSAPSA 544
+ SSP P T S PP S+ +S LTR A + R S+P
Sbjct: 1663 PKSRTARRGSRSSPEP----KTKSRTPPRRRSSRSSPELTRKARLS--RRSRSASSSPET 1716
Query: 545 GGIPVPRSKLAQPVRRSLPAPKTYGSMK 572
PR + + V PA K+ S +
Sbjct: 1717 RSRTPPRHRRSPSVSSPEPAEKSRSSRR 1744
Score = 48.9 bits (115), Expect = 1e-05
Identities = 50/209 (23%), Positives = 84/209 (40%), Gaps = 20/209 (9%)
Query: 367 PARGIEYSRVSPQPMISRLQQPRLSLQGHPTDLQTSNVKNEEKLRRSLPNLSRTSNTQVD 426
PA G+ +S V P + QQP P K RRS + S +S++
Sbjct: 2497 PAPGVPHSDVGEPPASTGAQQPSALAALQPA-----------KERRSSSSSSSSSSSSSS 2545
Query: 427 SVKSSRSDSNFQVPNGGIPRMQPQASAIPSPGKFRSPAAPSPLALRQPVKAFSNHGSGSP 486
S SS S S+ G + S++P + PSP P +A P
Sbjct: 2546 SSSSSSSSSS-----SGSSSSDSEGSSLPVQPEVALKRVPSPTPA--PKEAVREGRPPEP 2598
Query: 487 GSQEITQLTQTTSSPGPPMVQSTVSANPPSNINSATLTRPAGTTAMRSGLPRPSAPSAGG 546
+ + + ++SS S+ S++ S+ +S++ + + +++ S P P+ P
Sbjct: 2599 TPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQA 2658
Query: 547 IPVPRSKLAQP--VRRSLPAPKTYGSMKD 573
+P P S P RRS K S++D
Sbjct: 2659 LPKPASPKKPPPGERRSRSPRKPIDSLRD 2687
Score = 43.9 bits (102), Expect = 4e-04
Identities = 74/329 (22%), Positives = 127/329 (38%), Gaps = 53/329 (16%)
Query: 291 QEYAATTSRRSSGSSC--------NSTRRGTFSDQELDAQSLDDEDDN-MHHAVYPAVNR 341
++ + T SR+S SS R+G+ + + + QS+ + + + P +
Sbjct: 824 KQKSKTPSRQSHSSSSPHPKVKSGTPPRQGSITSPQANEQSVTPQRRSCFESSPDPELKS 883
Query: 342 FSPSPRNSPRPSPKQSPRNSPRSRSPARGIEYSRVSPQPMISRLQQPRLSLQGHPTDLQT 401
+PS + SP + ++P +SP+R SPQP + + PR +
Sbjct: 884 RTPSRHSCSGSSPPRVKSSTPPRQSPSRSS-----SPQPKVKAIISPRQRSHSGSSSPSP 938
Query: 402 SNVKNEEKLRRS-------------LPNLSRTSNTQVDSVKSSRSDSNFQVPNGGI---P 445
S V + RRS LP S + ++ D+ K Q +G I P
Sbjct: 939 SRVTSRTTPRRSRSVSPCSNVESRLLPRYSHSGSSSPDT-KVKPETPPRQSHSGSISPYP 997
Query: 446 RMQPQASAIPSPGKFRSP------------AAPSPLALRQPVKAFSNHGSGSPGSQEITQ 493
+++ Q PS +SP + P L+L VK+ + G G +
Sbjct: 998 KVKAQTPPGPSLSGSKSPCPQEKSKDSLVQSCPGSLSLCAGVKSSTPPGESYFGVSSLQL 1057
Query: 494 LTQTTSSP------GPPMVQSTVSANPPSNINSATLTRPAGTTAMRSGLPRPSAPSAGGI 547
Q+ +SP P V+ + S +P ++ S + T P G + RS P S I
Sbjct: 1058 KGQSQTSPDHRSDTSSPEVRQSHSESP--SLQSKSQTSPKGGRS-RSSSPVTELASRSPI 1114
Query: 548 PVPRSKL-AQPVRRSLPAPKTYGSMKDDS 575
R + A P+ +S +P+ D S
Sbjct: 1115 RQDRGEFSASPMLKSGMSPEQSRFQSDSS 1143
Score = 42.4 bits (98), Expect = 0.001
Identities = 51/223 (22%), Positives = 81/223 (36%), Gaps = 8/223 (3%)
Query: 334 AVYPAVNRFSPSPRNSPRPSPKQSPRNSPRSRSPARGIEYSR-----VSPQPMISRLQQP 388
A+ PA R S S +S S S +S S S S V P+ + R+ P
Sbjct: 2523 ALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSP 2582
Query: 389 RLSLQGHPTDLQTSNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQ 448
+ + + + ++ RRS + S +S++ S SS S S+ +
Sbjct: 2583 TPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2642
Query: 449 PQASAIPSPGKFRSPAAPSPLALRQPVKAFSNHGSGSPGSQEITQLTQTTSSPGPPMVQS 508
+S+ PSP K A P P + ++P S SP + I L + S P+ +
Sbjct: 2643 SSSSSSPSPAKPGPQALPKPASPKKPPP--GERRSRSP-RKPIDSLRDSRSLSYSPVERR 2699
Query: 509 TVSANPPSNINSATLTRPAGTTAMRSGLPRPSAPSAGGIPVPR 551
S P ++ + R PS P PR
Sbjct: 2700 RPSPQPSPRDQQSSSSERGSRRGQRGDSRSPSHKRRRETPSPR 2742
Score = 41.2 bits (95), Expect = 0.003
Identities = 61/232 (26%), Positives = 95/232 (40%), Gaps = 24/232 (10%)
Query: 343 SPSPRNSPRPSPKQSPRNSPRSRSPAR--GIEYSRVSPQPMISRLQQPRLSLQGHPTDLQ 400
+P+ R R S + R RSR+PAR G SR + SR + PR + ++
Sbjct: 651 TPARRGRSR-SRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVR 709
Query: 401 TSNVKNEEKLRRSLP-NLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQPQASAIP-SPG 458
+ RR + S N S + SRS+S+ ++ I + ++ + P S
Sbjct: 710 RGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKA 769
Query: 459 KFR-------SPAAPSPLALRQPVKAFSNHGSGSPGSQEITQLTQTTSSPGPPMVQSTVS 511
K R S ++P P Q S GS P ++ T ++ SS PP Q S
Sbjct: 770 KSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQK--S 827
Query: 512 ANPPSNINSATLTRPAGTTAMRSGLPRPSAPSAGGIPVPRS--KLAQPVRRS 561
P +S++ P ++SG P P G I P++ + P RRS
Sbjct: 828 KTPSRQSHSSSSPHP----KVKSGTP----PRQGSITSPQANEQSVTPQRRS 871
Score = 39.7 bits (91), Expect = 0.008
Identities = 50/226 (22%), Positives = 77/226 (34%), Gaps = 36/226 (15%)
Query: 353 SPKQSPRNSPRSRSPARGIEYSRVSPQPMISRLQQPRLSLQGHPTDLQTSNVKNEEKLRR 412
S SP + +P R +SP P + P SL G + K+++ L +
Sbjct: 970 SGSSSPDTKVKPETPPRQSHSGSISPYPKVKAQTPPGPSLSGSKSPCPQE--KSKDSLVQ 1027
Query: 413 SLPN-------------------------LSRTSNTQVDSVKSSRSDSNFQVPNGGIPRM 447
S P L S T D +S S + + P +
Sbjct: 1028 SCPGSLSLCAGVKSSTPPGESYFGVSSLQLKGQSQTSPDH-RSDTSSPEVRQSHSESPSL 1086
Query: 448 QPQASAIPSPGKFRSPAAPSPLALRQPVKAFSNHGSGSPGSQEITQLTQTTSSPGPPMVQ 507
Q ++ P G+ RS + + LA R P++ S SP + ++ SP Q
Sbjct: 1087 QSKSQTSPKGGRSRSSSPVTELASRSPIRQDRGEFSASP-------MLKSGMSPEQSRFQ 1139
Query: 508 STVSANPPSNINSATLTRPAGTTAMRSGLPRPSAPSAGGIPVPRSK 553
S S+ P + NS T + + P A P PR K
Sbjct: 1140 SDSSSYPTVDSNSLLGQSRLETAESKEKMALPPQEDATASP-PRQK 1184
Score = 39.3 bits (90), Expect = 0.010
Identities = 102/426 (23%), Positives = 157/426 (36%), Gaps = 71/426 (16%)
Query: 32 RSRSGAVQGAGSLGPGSPVRAGASIPSSGAAS-PRGFPLGLS-AKSGGGPGSGP------ 83
RSRSG+ G G G+P R S S G PR G S S P + P
Sbjct: 1438 RSRSGSSPGLRD-GSGTPSRHSLSGSSPGMKDIPRTPSRGRSECDSSPEPKALPQTPRPR 1496
Query: 84 -RRTSSEELRD---ATSLLAAGEGGLLDEVEPLRPDELERLSGWEEEEESWLYSSPKKKL 139
R SS EL + +G +D+ R +R +E K
Sbjct: 1497 SRSPSSPELNNKCLTPQRERSGSESSVDQKTVARTPLGQRSRSGSSQE-----LDVKPSA 1551
Query: 140 TPMQKSVSPLVWCRQVLDYPSPDVECAKKSLIHKLDQTMSALKRQNLYN-NPFNSMSYTS 198
+P ++S S SPD + ++ + + ++ S+ + + +P S S +S
Sbjct: 1552 SPQERSESD----------SSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGSS 1601
Query: 199 PY---SPNASSPYSSGFNSPSSTPVRPPIVKQLILPGNSGNLKSSDRNPPLSPQSSIDSE 255
P P A+ SG S SS + P + L SG+ S R P SP+ S +E
Sbjct: 1602 PEVKDKPRAAPRAQSG--SDSSPEPKAPAPRALPRRSRSGS-SSKGRGP--SPEGSSSTE 1656
Query: 256 LSASELDEDSIGSNYKLNDVTDVQILARMQEESLRQEYAATTSRRSSGSSCNSTRRGTFS 315
S + +R E + + RRSS SS TR+ S
Sbjct: 1657 SSPEHPPKSRTARRG-----------SRSSPEP-KTKSRTPPRRRSSRSSPELTRKARLS 1704
Query: 316 DQELDAQSLDDEDDNM--HHAVYPAVNRFSPSPRNSPRPSPKQSPRNSPRSRSPARGIEY 373
+ A S + H P+V+ SP P R S ++ +SPR+++ +R
Sbjct: 1705 RRSRSASSSPETRSRTPPRHRRSPSVS--SPEPAEKSRSSRRRRSASSPRTKTTSR---- 1758
Query: 374 SRVSPQPMISRLQQPRLSLQGHPTDLQTSNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRS 433
SP P P LQ S ++ + R+ R+ ++Q S + RS
Sbjct: 1759 RGRSPSP--------------KPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRS 1804
Query: 434 DSNFQV 439
S +V
Sbjct: 1805 RSRSRV 1810
Score = 35.0 bits (79), Expect = 0.19
Identities = 94/386 (24%), Positives = 143/386 (37%), Gaps = 71/386 (18%)
Query: 189 NPFNSMSYTSPYSPNASSPYSSGFNSPSSTPVRP-PIVKQLILPGNSGNLKSSDRNPPLS 247
+P S T P P A +P + + S P+ P+ ++ + P + + + DR+PP S
Sbjct: 351 SPSPERSSTGP-EPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEAS-PTRDRSPPKS 408
Query: 248 PQSSIDSELSASELDEDSIGSNYKLNDVTDVQILARMQEESLRQEYAATTSRRSSGSSCN 307
P+ S S+SE S T V A ES + A + R S S +
Sbjct: 409 PEKLPQS--SSSESSPPS-------PQPTKVSRHASSSPESPKPAPAPGSHREISSSPTS 459
Query: 308 STRRGTFSDQELDAQSLDDEDDNMHHAVYPAVNRFSPSPRNSPRPSPKQSPRNSPRSRSP 367
R + D + H +PS R SP + R RSR+P
Sbjct: 460 KNR----------SHGRAKRDKSHSH---------TPSRRMGRSRSPATAKRGRSRSRTP 500
Query: 368 A-RGIEYSRVSPQPMISRLQQPRLSLQGHPTDLQTSNVKNEEKLRRS----LPNLSRTSN 422
RG SR SPQ SR Q + ++ ++ RS P SR+ N
Sbjct: 501 TKRGHSRSR-SPQWRRSRSAQ------------RWGRSRSPQRRGRSRSPQRPGWSRSRN 547
Query: 423 TQ----VDSVKSSRSDSNFQVPNGGIPRMQPQASAIPSPGKFRSPA---APSPLALRQPV 475
TQ S + RS S G R + + A + R+PA + S R+
Sbjct: 548 TQRRGRSRSARRGRSHSRSPATRG---RSRSRTPARRGRSRSRTPARRRSRSRTPTRRRS 604
Query: 476 KAFSNHGSGSPGSQEITQLTQTTSSPGPPMVQSTVSANPPSNINSATLTRPAGTTAMRSG 535
++ + G S+ + T SP V+ + P+ + + +R T R G
Sbjct: 605 RSRTPARRGRSRSRTPARRRSRTRSP----VRRRSRSRSPARRSGRSRSR----TPARRG 656
Query: 536 LPRPSAPSAGGIPVPRSKLAQPVRRS 561
R P+ G RS+ P RRS
Sbjct: 657 RSRSRTPARRG----RSRSRTPARRS 678
Score = 34.3 bits (77), Expect = 0.32
Identities = 124/564 (21%), Positives = 197/564 (34%), Gaps = 75/564 (13%)
Query: 32 RSRSGAVQGAGSLGPGSPVRAGASIPSSGAASPRGFPLGLSAKSGGGPGS------GPRR 85
RSRSG+ Q SP S S + + PL ++SG P PRR
Sbjct: 1536 RSRSGSSQELDVKPSASPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPRR 1595
Query: 86 T---SSEELRDATSLLAAGEGGLLDEVEPLRPDE--LERLS---------GWEEEEESWL 131
+ SS E++D + G EP P L R S G E S
Sbjct: 1596 SRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSST 1655
Query: 132 YSSPK---KKLT----------PMQKSVSPLVWCRQVLDYPSPDVECAKKSLIHKLDQTM 178
SSP+ K T P KS +P R+ SP E +K+ + + ++
Sbjct: 1656 ESSPEHPPKSRTARRGSRSSPEPKTKSRTPP---RRRSSRSSP--ELTRKARLSRRSRSA 1710
Query: 179 SALKRQNLYNNPFNSMSYTSPYSPNASSPYSSGFNSPSSTPVRPPIVKQLILPGNSGNLK 238
S+ P + S P+ SSP + S SS R + G
Sbjct: 1711 SSSPETRSRTPPRHRRS------PSVSSPEPAE-KSRSSRRRRSASSPRTKTTSRRGRSP 1763
Query: 239 SSDRNPPLSPQSSIDSELSASELDEDSIGSNYKLNDVTDVQILARMQEESLRQEYAATTS 298
S +S E + + D GS+ Q +R ++ S + + T
Sbjct: 1764 SPKPRGLQRSRSRSRREKTRTTRRRDRSGSS---------QSTSRRRQRS--RSRSRVTR 1812
Query: 299 RRSSGSSCNSTRRGTFSDQELDAQSLDDEDDNMHHAVYPAVNRFSPSPRNSPRPSPKQSP 358
RR GS +S ++ + + +R SP+P R +
Sbjct: 1813 RRRGGSGYHSRSPARQESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPAT 1872
Query: 359 RNSPRSRSPARGIEYSRVSPQPMISRLQQPRLSLQGHPTDLQTSNVKNEEKLRRSLPNLS 418
RSR+P SR P+ R + R S+ + + S V R+ P
Sbjct: 1873 HRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTR 1932
Query: 419 RTSNTQVDSVKSSRSDSNFQVPNGGIPRMQPQASAIPSPGKFRSPAAPSPLALRQPVKAF 478
R S ++ ++R S + P + R + + S P + RS + SP+ R+
Sbjct: 1933 RRSRSR---TPTTRRRSRSRTP--PVTRRRSR-SRTPPVTRRRSRSRTSPITRRR----- 1981
Query: 479 SNHGSGSPGSQEITQLTQTTSSPGPPMVQSTVSANPPSNINSATLTRPAGTTAMRSG--- 535
S S S + +++ +SP +S +P + S + T PA RS
Sbjct: 1982 ----SRSRTSPVTRRRSRSRTSP-VTRRRSRSRTSPVTRRRSRSRTPPAIRRRSRSRTPL 2036
Query: 536 LPRPSAPSAGGIPVPRSKLAQPVR 559
LPR + S + + R ++ R
Sbjct: 2037 LPRKRSRSRSPLAIRRRSRSRTPR 2060
Score = 33.1 bits (74), Expect = 0.72
Identities = 54/225 (24%), Positives = 78/225 (34%), Gaps = 43/225 (19%)
Query: 369 RGIEYSRVSPQPMISRLQQPRLSLQGHPTDLQTSNVKNEEKLRRSLPNLSRTSNTQVDSV 428
R E + +P+P S PT Q K +++ RRS + R +
Sbjct: 156 RAREAKQPAPEPPKPYSLVRESSSSRSPTPKQKKKKKKKDRGRRSESSSPRRERKKSSKK 215
Query: 429 KSSRSDSNFQVPNGGIP-----------RMQPQASAIPSP-------------------- 457
K RS+S + P + + S P+P
Sbjct: 216 KKHRSESESKKRKHRSPTPKSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSADSASSSDTS 275
Query: 458 -GKFRSPAA---PSPLALRQPVKAFSNHGSG-SPGSQEITQLTQTTSSPGPPMVQ-STVS 511
+ RS AA + LA R P A G G +P S+ T TQ SSP Q S+
Sbjct: 276 RSRSRSAAAKTHTTALAGRSPSPASGRRGEGDAPFSEPGTTSTQRPSSPETATKQPSSPY 335
Query: 512 ANPPSNINSATLTRPAGTTAMRSGLPRPSAPSA------GGIPVP 550
+ + + TRP+ + S P P AP+ GG P P
Sbjct: 336 EDKDKDKKEKSATRPSPSPERSSTGPEPPAPTPLLAERHGGSPQP 380
Score = 33.1 bits (74), Expect = 0.72
Identities = 50/208 (24%), Positives = 76/208 (36%), Gaps = 17/208 (8%)
Query: 192 NSMSYTSPYSPNASSPYSSGFNSPSSTPVRPPI-VKQLILPGNSGNLKSSDRNPP----- 245
+S S +S S ++SS SS + SS PV+P + +K++ P + + PP
Sbjct: 2542 SSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPA 2601
Query: 246 -------LSPQSSIDSELSASELDEDSIGSNYKLNDVTDVQILARMQEESLRQEYAATTS 298
S SS S S+S S S+ + + + + A
Sbjct: 2602 KRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPK 2661
Query: 299 RRSSGSSCNSTRRGTFSDQELDAQSLDDEDDNMHHAVYPAVNRFSPSPRNSPRPSPKQSP 358
S RR + +D SL D + V PSPR+ S ++
Sbjct: 2662 PASPKKPPPGERRSRSPRKPID--SLRDSRSLSYSPVERRRPSPQPSPRDQQSSSSERGS 2719
Query: 359 RNSPR--SRSPARGIEYSRVSPQPMISR 384
R R SRSP+ SP+PM R
Sbjct: 2720 RRGQRGDSRSPSHKRRRETPSPRPMRHR 2747
>gi|32307128 nuclear receptor coactivator 6 [Homo sapiens]
Length = 2063
Score = 53.9 bits (128), Expect = 4e-07
Identities = 95/358 (26%), Positives = 129/358 (36%), Gaps = 50/358 (13%)
Query: 184 QNLY--NNPFNSMSYTSPYSPNASSPYSSGFNSPSSTPVRP-----PIVKQLILPGNSGN 236
QN++ P N S P + S P P+S P P P+ L NS
Sbjct: 1052 QNVHPPRGPLNPDSQRMPMQQSGSVPVMVSLQGPASVPPSPDKQRMPMPVNTPLGSNSRK 1111
Query: 237 L--KSSDRNPPLSPQSSIDS--ELSASELDEDSIGSNYKLNDVTDVQILARMQEESLRQE 292
+ + S +NP SP + + S E S SE G N + V L Q
Sbjct: 1112 MVYQESPQNPSSSPLAEMASLPEASGSEAPSVPGGPNNMPSHVV------------LPQN 1159
Query: 293 YAATTSRRSSGSSCNSTRRGTFSDQELDAQSLDDEDDNMHH----AVYPAVNRFSPSPRN 348
T + S ++T+ T Q+ SL HH A +R R
Sbjct: 1160 QLMMTGPKPGPSPLSATQGAT--PQQPPVNSLPSSHG--HHFPNVAAPTQTSRPKTPNRA 1215
Query: 349 SPRPSPKQSPRNSPRSRSPARGIEYSRVSPQPMISRLQQPRLSLQGHPT-------DLQT 401
SPRP Q+P N P S P+ I S I+ L P++++ P D Q
Sbjct: 1216 SPRPYYPQTPNNRPPSTEPSE-ISLSPERLNASIAGLFPPQINIPLPPRPNLNRGFDQQG 1274
Query: 402 SNVKNEEKLRRSLPNL----SRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQPQASAIPSP 457
N + + ++ NL S + Q + S +S Q +G R P S SP
Sbjct: 1275 LNPTTLKAIGQAPSNLTMNPSNFATPQTHKLDSVVVNSGKQSNSGATKRASPSNSRRSSP 1334
Query: 458 GKFRSPAAPSPLALRQPVKAFSNHGSGSPGSQEITQLTQTTSSPGPPMVQSTVSANPP 515
G R PSP RQ KA + SQ L Q P +V T ANPP
Sbjct: 1335 GSSRK-TTPSP--GRQNSKA----PKLTLASQTNAALLQNVELPRNVLVSPTPLANPP 1385
Score = 38.9 bits (89), Expect = 0.013
Identities = 81/381 (21%), Positives = 142/381 (37%), Gaps = 48/381 (12%)
Query: 201 SPNASSPYSSGFNSPSSTPVRPPIVKQLILPGNSGNLKSSDRNP--PLSPQSSIDSELSA 258
S N S + FN+P S +GN S +NP P++ ++ S L
Sbjct: 842 SGNHFSGHGMSFNAPFSG-------------APNGNQMSCGQNPGFPVNKDVTLTSPLLV 888
Query: 259 SELDEDSIGSNYKLNDVTDVQILARMQEESLRQEYAATTSRRSSGSSCNSTRRGTFSDQE 318
+ L D ++ +N+ + + +++ ++ +++S N+ +E
Sbjct: 889 NLLQSDISAGHFGVNNKQNNTNANKPKKKKPPRK------KKNSQQDLNTPDTRPAGLEE 942
Query: 319 LDAQSLDDEDDNMHHAVYPAVNRFSPSPRNSPRPSPKQSPRNSPRSRSPARGIEYSRVSP 378
D L E P + FS N P P Q P + P + +++ P
Sbjct: 943 ADQPPLPGEQGINLDNSGPKLPEFS----NRPPGYPSQPVEQRPLQQMPPQLMQHVAPPP 998
Query: 379 QPMISRLQQPRLSLQGHPTDLQTSNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQ 438
QP + Q Q P Q + + +++ ++ + L + + SV+ S N
Sbjct: 999 QPPQQQPQPQLPQQQQPPPPSQPQSQQQQQQQQQMMMMLMMQQDPK--SVRLPVS-QNVH 1055
Query: 439 VPNGGI----PRM-QPQASAIPSPGKFRSPAA--PSPLALRQPVKAFSNHGSG------- 484
P G + RM Q+ ++P + PA+ PSP R P+ + GS
Sbjct: 1056 PPRGPLNPDSQRMPMQQSGSVPVMVSLQGPASVPPSPDKQRMPMPVNTPLGSNSRKMVYQ 1115
Query: 485 -SPGSQEITQLTQTTSSPGPPMVQSTVSANPPSNINSATLTRPAGTTAMRSGLPRPSAPS 543
SP + + L + S P ++ P+N+ S + P M P PS S
Sbjct: 1116 ESPQNPSSSPLAEMASLPEASGSEAPSVPGGPNNMPSHVVL-PQNQLMMTGPKPGPSPLS 1174
Query: 544 AGGIPVPRSKLAQPVRRSLPA 564
A P+ QP SLP+
Sbjct: 1175 ATQGATPQ----QPPVNSLPS 1191
Score = 37.4 bits (85), Expect = 0.038
Identities = 59/326 (18%), Positives = 110/326 (33%), Gaps = 56/326 (17%)
Query: 202 PNASSPYSSGFNSPSSTPVRPP--IVKQLILPGNSGNLKSSDRNP-PLSPQSSIDSELSA 258
P AS P N+P++ + P + ++ PG + L+ R P P S ++D LS
Sbjct: 166 PMASGPGIIRMNNPATVMIPPGGNVSSSMMAPGPNPELQP--RTPRPASQSDAMDPLLSG 223
Query: 259 SELDEDS---------------IGSNYKLNDVTDVQILARMQEESLRQEYAATTSRRSSG 303
+ + S + N ++N Q+ + Q++ +Q+ ++
Sbjct: 224 LHIQQQSHPSGSLAPPHHPMQPVSVNRQMNPANFPQLQQQQQQQQQQQQQQQQQQQQQQQ 283
Query: 304 SSCNSTRRGTFSDQELDAQSLDDEDDNMHHAVYPAVNRFSPSPRNSPRPSPKQSP----- 358
+ R Q+ Q + + P ++ P + +P P Q
Sbjct: 284 QQLQA--RPPQQHQQQQPQGIRPQFTAPTQVPVPP--GWNQLPSGALQPPPAQGSLGTMT 339
Query: 359 RNSPRSRSPARGIEYSRVSPQPMISRLQQPRLSLQGHPTDLQTSNVKNEEKLRRSLPNLS 418
N ++P G ++ +P ++ +Q P HP + + + P +S
Sbjct: 340 ANQGWKKAPLPGPMQQQLQARPSLATVQTP-----SHPPPPYPFGSQQASQAHTNFPQMS 394
Query: 419 RTSNTQVDSVKSSRSDSNFQVPNGGIPRMQPQASAIPSPGKFRSPAAPSPLALRQPVKAF 478
+KS + GG P + +P L + P +
Sbjct: 395 NPGQFTAPQMKSLQ---------GG-------------PSRVPTPLQQPHLTNKSPASSP 432
Query: 479 SNHGSGSPGSQEITQLTQTTSSPGPP 504
S+ GSP S TQ P PP
Sbjct: 433 SSFQQGSPASSPTVNQTQQQMGPRPP 458
Score = 33.9 bits (76), Expect = 0.42
Identities = 121/582 (20%), Positives = 206/582 (35%), Gaps = 128/582 (21%)
Query: 11 DQEVRKLQELVKKLEKQNE----QLRSRSGAVQGAGSLGPGSPVRAGASIP-SSGAASPR 65
+Q++R L L ++E + ++RS V+ G +G G+ VR A P +SG R
Sbjct: 116 NQQLRDLGILSVQIEGEGAINLALAQNRSQDVRMNGPMGAGNSVRMEAGFPMASGPGIIR 175
Query: 66 -GFPLGLSAKSGGGPGSGPRRTS-SEELRDATSLLAAGEGGLLDEVEPLRPDELERLSGW 123
P + GG S + EL+ T A+ D ++PL LSG
Sbjct: 176 MNNPATVMIPPGGNVSSSMMAPGPNPELQPRTPRPASQS----DAMDPL-------LSGL 224
Query: 124 EEEEESWLYSSPKKKLTPMQKSVSPLVWCRQVLDYPSPDVECAKKSLIHKLDQTMSALKR 183
+++S P L P + P+ RQ+ P ++ ++ + Q ++
Sbjct: 225 HIQQQS----HPSGSLAPPHHPMQPVSVNRQMNPANFPQLQQQQQQQQQQQQQQQQQQQQ 280
Query: 184 QN---LYNNPFNSMSYTSP------YSPNASSPYSSGFNSPSSTPVRPPIV--------- 225
Q L P P ++ P G+N S ++PP
Sbjct: 281 QQQQQLQARPPQQHQQQQPQGIRPQFTAPTQVPVPPGWNQLPSGALQPPPAQGSLGTMTA 340
Query: 226 ----KQLILPG----------NSGNLKSSDRNPPLSPQSSIDSELSASELDEDSIGSNYK 271
K+ LPG + +++ PP P S + + + + S +
Sbjct: 341 NQGWKKAPLPGPMQQQLQARPSLATVQTPSHPPPPYPFGSQQASQAHTNFPQMSNPGQFT 400
Query: 272 LNDVTDVQILARMQEESLRQEYAATTSRRSSGSSCNSTRRGTFSDQELDAQSLDDEDDNM 331
+ +Q L+Q + + +S SS +S ++G+
Sbjct: 401 APQMKSLQGGPSRVPTPLQQPHL---TNKSPASSPSSFQQGS------------------ 439
Query: 332 HHAVYPAVNRFSPS-----PRNSPRPSPKQSPRNSPRSRSPARGIEYSRVSPQPMISRLQ 386
A P VN+ P+N+P P Q P +SP R+P ++ V P M+ + Q
Sbjct: 440 -PASSPTVNQTQQQMGPRPPQNNPLPQGFQQPVSSP-GRNPM--VQQGNVPPNFMVMQQQ 495
Query: 387 QPRLSLQGHPTDLQTSNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPR 446
P QG P L P L + +++ NF G +P
Sbjct: 496 PPN---QG-PQSLH--------------PGLGGMPKRLPPGFSAGQANPNFM--QGQVP- 534
Query: 447 MQPQASAIPSPGKFRSPAAPSPLALRQPVKAFSNHGSGSPGSQEITQLTQTTSSPGPPMV 506
++ +PG +P L Q V+ G+G P + Q S GPP +
Sbjct: 535 ----STTATTPGNSGAP----QLQANQNVQHAGGQGAGPPQN-------QMQVSHGPPNM 579
Query: 507 QSTVSANPPSNINSATLTRPAGTTAMRSGLPRPSAPSAGGIP 548
N+N+ + AGT SG+P+ + + G P
Sbjct: 580 MQPSLMGIHGNMNN----QQAGT----SGVPQVNLSNMQGQP 613
Score = 30.0 bits (66), Expect = 6.1
Identities = 96/427 (22%), Positives = 151/427 (35%), Gaps = 70/427 (16%)
Query: 172 HKLDQTMSALKRQNLYNNPFNSMSYTSPYSPNASSPYSSGFNSPS-------------ST 218
HKLD + +Q+ + SP + SSP SS +PS ++
Sbjct: 1303 HKLDSVVVNSGKQS----NSGATKRASPSNSRRSSPGSSRKTTPSPGRQNSKAPKLTLAS 1358
Query: 219 PVRPPIVKQLILPGNSGNLKSSDRNPP----------LSPQSSIDSELSASELDEDSIGS 268
+++ + LP N + NPP L+PQ+S S + + ED+ S
Sbjct: 1359 QTNAALLQNVELPRNVLVSPTPLANPPVPGSFPNNSGLNPQNSTVSVAAVGGVVEDNKES 1418
Query: 269 NYKLNDVTDVQILARMQEESLRQEYAATTSRRSSGSSCNSTRRGTFSDQELDAQSLDDED 328
D +R ++ ++ + + S + G Q D L +
Sbjct: 1419 LNVPQDSDCQNSQSRKEQVNIELKAVPAQEVKMVVPEDQSKKDG----QPSDPNKLPSVE 1474
Query: 329 DNMHHAVYPAVNRFSPSPRNSPRP-SPKQSPRNSPRSRSPARGIEYSRVSPQPMISRLQQ 387
+N N SP+ R +P S +P G+ V+P P++S
Sbjct: 1475 ENK--------NLVSPAMREAPTSLSQLLDNSGAPNVTIKPPGLTDLEVTP-PVVSGEDL 1525
Query: 388 PRLSLQGHPTDLQTS-------NVKNEEKLRRSL--PNLSRTSNTQVDSVKS--SR--SD 434
+ S+ DL +S N+ + +L SL P LS S+ S+ SR S
Sbjct: 1526 KKASVIPTLQDLSSSKEPSNSLNLPHSNELCSSLVHPELSEVSSNVAPSIPPVMSRPVSS 1585
Query: 435 SNFQVPNGGIPRMQPQASAIPSP---GKFRSPAAPSPL--ALRQPVKAFSNHGSGSPGSQ 489
S+ P +P Q +P S A P+ L AL V N GS
Sbjct: 1586 SSISTP---LPPNQITVFVTSNPITTSANTSAALPTHLQSALMSTVVTMPNAGS----KV 1638
Query: 490 EITQLTQTTSSPGPPMVQSTVSANPPSNIN----SATLTRPAGTTAMRSGLPRPSAPSAG 545
+++ S P + V N S I S T PA SGL PS G
Sbjct: 1639 MVSEGQSAAQSNARPQFITPVFINSSSIIQVMKGSQPSTIPAAPLTTNSGLMPPSVAVVG 1698
Query: 546 GIPVPRS 552
+ +P++
Sbjct: 1699 PLHIPQN 1705
>gi|15529996 son of sevenless homolog 1 [Homo sapiens]
Length = 1333
Score = 52.8 bits (125), Expect = 9e-07
Identities = 65/248 (26%), Positives = 100/248 (40%), Gaps = 28/248 (11%)
Query: 337 PAVNRFSPSPRNSPRPSP-KQSPRNSPRSRSPARGIEYSRVSPQPMISRLQQPRLSLQGH 395
P V +P P P+P +Q PR SR P E + +P + L P S
Sbjct: 1038 PGVRPSNPRPGTMRHPTPLQQEPRKISYSRIPESETESTASAPNSPRTPLTPPPASGASS 1097
Query: 396 PTDLQTSNVKNEEK----------LRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIP 445
TD+ + + ++ +LP+ R+++ V S+ ++ VP P
Sbjct: 1098 TTDVCSVFDSDHSSPFHSSNDTVFIQVTLPHGPRSAS--VSSISLTKGTDEVPVPPPVPP 1155
Query: 446 RMQPQ-ASAIPSPGKFRSPAAPSPLAL--RQPV-KAFSNHGSGSPGSQEITQLTQTTSSP 501
R +P+ A A SP K S SP A+ RQP KA+S S I+ T + P
Sbjct: 1156 RRRPESAPAESSPSKIMSKHLDSPPAIPPRQPTSKAYSPRYS-------ISDRTSISDPP 1208
Query: 502 -GPPMVQSTVSANPPSNINSATL---TRPAGTTAMRSGLPRPSAPSAGGIPVPRSKLAQP 557
PP++ P +S+ L P G + P++PS P P++
Sbjct: 1209 ESPPLLPPREPVRTPDVFSSSPLHLQPPPLGKKSDHGNAFFPNSPSPFTPPPPQTPSPHG 1268
Query: 558 VRRSLPAP 565
RR LP+P
Sbjct: 1269 TRRHLPSP 1276
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 50.8 bits (120), Expect = 3e-06
Identities = 86/370 (23%), Positives = 142/370 (38%), Gaps = 66/370 (17%)
Query: 236 NLKSSDRNPPLSPQ-SSIDSEL-----SASELDEDSIGSNYKLNDVTDVQILARMQEESL 289
+++SS RN P + SS DS+ SA ++ E++ S+ ++ + +A EE+
Sbjct: 51 DIRSSGRNSPSAASTSSNDSKAETVKKSAKKVKEEA--SSPLKSNKRQREKVASDTEEAD 108
Query: 290 RQEYAATTSRRSSGSSCNSTRRGTFSDQELDAQSLDDEDDNMHHAVYPAVNRFSPSPRNS 349
R T ++ S + S G SD ++S++DE +
Sbjct: 109 RTSSKKTKTQEISRPNSPSEGEGESSD----SRSVNDEGSS------------------D 146
Query: 350 PRPSPKQSPRNSPRSRSPARGIEYSRVSPQPMISRLQQPRLSLQGHPTDLQTSNVKNEEK 409
P+ + + SP SP S S Q + + Q P L T +S +
Sbjct: 147 PKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQ 206
Query: 410 LRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQ-PQASAI-----PSPGKFRSP 463
L P S T+ S +S++ + Q P +P QA A+ PSP P
Sbjct: 207 LPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSP---HPP 263
Query: 464 AAPSPLALRQPVKAFSN------------HGSGSPGSQEITQLTQTTSSPGPPMV----- 506
PSP QP+ + HG G PG + Q PGPP
Sbjct: 264 PHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSL-QAGPLLQHPGPPQPFGLPP 322
Query: 507 -----QSTVSANPPSNINSATLTRPAGTTAMRSGLP---RPSAPSAGGIPVPRSKLAQPV 558
Q+ + +P + +L PA +A++S P +P P+ +P + P+
Sbjct: 323 QASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPI 382
Query: 559 RRSLPAPKTY 568
+ LPAP+ +
Sbjct: 383 PQ-LPAPQAH 391
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 50.8 bits (120), Expect = 3e-06
Identities = 86/370 (23%), Positives = 142/370 (38%), Gaps = 66/370 (17%)
Query: 236 NLKSSDRNPPLSPQ-SSIDSEL-----SASELDEDSIGSNYKLNDVTDVQILARMQEESL 289
+++SS RN P + SS DS+ SA ++ E++ S+ ++ + +A EE+
Sbjct: 605 DIRSSGRNSPSAASTSSNDSKAETVKKSAKKVKEEA--SSPLKSNKRQREKVASDTEEAD 662
Query: 290 RQEYAATTSRRSSGSSCNSTRRGTFSDQELDAQSLDDEDDNMHHAVYPAVNRFSPSPRNS 349
R T ++ S + S G SD ++S++DE +
Sbjct: 663 RTSSKKTKTQEISRPNSPSEGEGESSD----SRSVNDEGSS------------------D 700
Query: 350 PRPSPKQSPRNSPRSRSPARGIEYSRVSPQPMISRLQQPRLSLQGHPTDLQTSNVKNEEK 409
P+ + + SP SP S S Q + + Q P L T +S +
Sbjct: 701 PKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQ 760
Query: 410 LRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQ-PQASAI-----PSPGKFRSP 463
L P S T+ S +S++ + Q P +P QA A+ PSP P
Sbjct: 761 LPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSP---HPP 817
Query: 464 AAPSPLALRQPVKAFSN------------HGSGSPGSQEITQLTQTTSSPGPPMV----- 506
PSP QP+ + HG G PG + Q PGPP
Sbjct: 818 PHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSL-QAGPLLQHPGPPQPFGLPP 876
Query: 507 -----QSTVSANPPSNINSATLTRPAGTTAMRSGLP---RPSAPSAGGIPVPRSKLAQPV 558
Q+ + +P + +L PA +A++S P +P P+ +P + P+
Sbjct: 877 QASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPI 936
Query: 559 RRSLPAPKTY 568
+ LPAP+ +
Sbjct: 937 PQ-LPAPQAH 945
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 50.8 bits (120), Expect = 3e-06
Identities = 86/370 (23%), Positives = 142/370 (38%), Gaps = 66/370 (17%)
Query: 236 NLKSSDRNPPLSPQ-SSIDSEL-----SASELDEDSIGSNYKLNDVTDVQILARMQEESL 289
+++SS RN P + SS DS+ SA ++ E++ S+ ++ + +A EE+
Sbjct: 605 DIRSSGRNSPSAASTSSNDSKAETVKKSAKKVKEEA--SSPLKSNKRQREKVASDTEEAD 662
Query: 290 RQEYAATTSRRSSGSSCNSTRRGTFSDQELDAQSLDDEDDNMHHAVYPAVNRFSPSPRNS 349
R T ++ S + S G SD ++S++DE +
Sbjct: 663 RTSSKKTKTQEISRPNSPSEGEGESSD----SRSVNDEGSS------------------D 700
Query: 350 PRPSPKQSPRNSPRSRSPARGIEYSRVSPQPMISRLQQPRLSLQGHPTDLQTSNVKNEEK 409
P+ + + SP SP S S Q + + Q P L T +S +
Sbjct: 701 PKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQ 760
Query: 410 LRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQ-PQASAI-----PSPGKFRSP 463
L P S T+ S +S++ + Q P +P QA A+ PSP P
Sbjct: 761 LPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSP---HPP 817
Query: 464 AAPSPLALRQPVKAFSN------------HGSGSPGSQEITQLTQTTSSPGPPMV----- 506
PSP QP+ + HG G PG + Q PGPP
Sbjct: 818 PHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSL-QAGPLLQHPGPPQPFGLPP 876
Query: 507 -----QSTVSANPPSNINSATLTRPAGTTAMRSGLP---RPSAPSAGGIPVPRSKLAQPV 558
Q+ + +P + +L PA +A++S P +P P+ +P + P+
Sbjct: 877 QASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPI 936
Query: 559 RRSLPAPKTY 568
+ LPAP+ +
Sbjct: 937 PQ-LPAPQAH 945
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 50.8 bits (120), Expect = 3e-06
Identities = 85/333 (25%), Positives = 126/333 (37%), Gaps = 50/333 (15%)
Query: 249 QSSIDSELSASELDEDSIGSNYKLNDVTDVQ--ILARMQEESLRQEYAATTSR---RSSG 303
QSS DS S+S DE S+ K +V + +R S R+ T+ R R S
Sbjct: 491 QSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRSP 550
Query: 304 SSCNSTRRGTFSDQELDAQSLDDEDDNMHHAVYPAVNRFSPSPRN---------SPRPSP 354
S + RR + S + P R SPSPR SP P P
Sbjct: 551 SPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPP 610
Query: 355 KQ---SPRNSPRSRSPARGIEYSRVSPQPM-------ISRLQQPRLSLQ---GHPTDLQT 401
K+ SP P+ R+ RVS P +++ + P LS + G T
Sbjct: 611 KRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRST 670
Query: 402 SNVKNEEKLRRSLPNLSRTSNTQVDSVK------SSRSDSNFQVPNGGIPRMQP--QASA 453
++ + +R P+ R Q S +S S Q P+ P +P + S
Sbjct: 671 REARSPQPNKRHSPS-PRPRAPQTSSSPPPVRRGASSSPQRRQSPS---PSTRPIRRVSR 726
Query: 454 IPSPGKFRSPAAPSPLALRQPVKAFSNHGSGSPGSQEITQLTQTTSSPGPPMVQSTVSAN 513
P P K + A+PSP ++R+ + S GS P +++ P PP S +
Sbjct: 727 TPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKK---------PPAPP--SPVQSQS 775
Query: 514 PPSNINSATLTRPAGTTAMRSGLPRPSAPSAGG 546
P +N + A + A + PR S GG
Sbjct: 776 PSTNWSPAVPVKKAKSPTPSPSPPRNSDQEGGG 808
Score = 45.4 bits (106), Expect = 1e-04
Identities = 89/385 (23%), Positives = 126/385 (32%), Gaps = 65/385 (16%)
Query: 197 TSPYSPNASSPYSSGFNSPSSTPVRPPIVKQLILPGNSGNLKSSDRN-PPLSPQSSIDSE 255
T SP+AS P SP +TP PP + P S + S + P +
Sbjct: 385 TRRLSPSASPPRRRHRPSPPATP--PPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKH 442
Query: 256 LSASELDEDSIGSNYKLNDVTDVQI-----LARMQEESLRQEYAATTSRRSSGSSCNSTR 310
+ + S + ++++ + +A R++Y + SS S +S
Sbjct: 443 KGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSS-- 500
Query: 311 RGTFSDQELDAQSLDDEDDNMHHAVYPAVNR---FSPSPRNSPRPSPKQ---SPRNSPRS 364
S +DE H V R SPS SP P +Q SPR R
Sbjct: 501 ------------SSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGR-RR 547
Query: 365 RSPARGIEYSRVSPQPMISRLQQPRLSLQGHPTDLQTSNVKNEEKLRRSLPNLSRTSNTQ 424
RSP+ R SP P P + PT + RRS P+ R S
Sbjct: 548 RSPSPPPTRRRRSPSPA------PPPRRRRTPTPPPRRRTPSPPPRRRS-PSPRRYS--- 597
Query: 425 VDSVKSSRSDSNFQVPNGGIPRMQPQASAIPSPGKFRSPAAPSPLALRQPVKAFSNHGSG 484
P +Q + S P P + + P P P S
Sbjct: 598 --------------------PPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSH 637
Query: 485 SPGSQEITQLTQTTSSPGPPMVQSTVSANPPSNINSATLTRPAGTTAMRSGLPRPSAPSA 544
SP ++ + + T P + + PS S R S PRP AP
Sbjct: 638 SPPPKQ--RSSPVTKRRSPSLSSKHRKGSSPSR--STREARSPQPNKRHSPSPRPRAPQT 693
Query: 545 GGIPVP--RSKLAQPVRRSLPAPKT 567
P P R + P RR P+P T
Sbjct: 694 SSSPPPVRRGASSSPQRRQSPSPST 718
Score = 43.5 bits (101), Expect = 5e-04
Identities = 70/312 (22%), Positives = 111/312 (35%), Gaps = 40/312 (12%)
Query: 290 RQEYAATTSRRSSGSSCNSTRRGTFSDQELDAQSLDDEDDNMHHAVYPAVNRFSPSPRNS 349
R+ ++ + SS SS +S R S + + + P R PSP +
Sbjct: 347 RRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPAT 406
Query: 350 PRPSPKQS--PRNSPRSRSPARGIEYSRVSPQPMISRLQQPRLSLQGHPTDLQTSNVKNE 407
P P + S P+ S R+R + R S + + + R S P + ++E
Sbjct: 407 PPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESE 466
Query: 408 E------------KLRRSLPNLSRTSNTQVDSVKSSRSD--SNFQVPNGGIPRMQ---PQ 450
E + RR ++ S++ S SS + V NG + R + P
Sbjct: 467 EDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPS 526
Query: 451 ASAIPSPGKFRSPAAPSPLALRQP-VKAFSNHGSGSPGSQEITQLTQT------TSSPGP 503
SA PSP K + +P R P S SP + T T T SP P
Sbjct: 527 RSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPP 586
Query: 504 -----------PMVQSTVSANPPSNINSATLTRPAGTTAMRSGLPRPSAPSAGGIPVPRS 552
P +Q S +PP +A+ P A S P+ + P P+
Sbjct: 587 RRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHS---PPPKQ 643
Query: 553 KLAQPVRRSLPA 564
+ + +R P+
Sbjct: 644 RSSPVTKRRSPS 655
Score = 40.0 bits (92), Expect = 0.006
Identities = 62/268 (23%), Positives = 104/268 (38%), Gaps = 46/268 (17%)
Query: 343 SPSPRNSPRP-------SPKQSPRNSPRSRSPARGIEYSRVS---PQPMISRLQQPRLSL 392
SPSPR P S +SPR+ +SRSP+ E + P+P + ++++P +
Sbjct: 179 SPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSV-KVKEPSVQE 237
Query: 393 QGHPTDL-------------QTSNVKNEEKLRRSLPNLSRT-SNTQVDSVKSSRSDSNFQ 438
+D+ + S KN +K + R+ S ++ S SRS S+ +
Sbjct: 238 ATSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTR 297
Query: 439 V-------PNGGIPRMQPQASAIPSPGK----FRSPAAPSPLALRQPVKAFSNHGSGSPG 487
PR +P PSP + R P P R PV+ + G
Sbjct: 298 PRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSG 357
Query: 488 SQEITQLTQTTSSPGPPMVQSTVSANPPSNINSATLTRPAGTTAMRSGLPRPSA---PSA 544
S + +++ S P P + +++PP + P+ + R P P A P
Sbjct: 358 SSSSSSSSRSRSPPKKPPKR---TSSPPRKTRRLS---PSASPPRRRHRPSPPATPPPKT 411
Query: 545 GGIPVP-RSKLAQPVRRSLPAPKTYGSM 571
P P +S + R S+ +T G +
Sbjct: 412 RHSPTPQQSNRTRKSRVSVSPGRTSGKV 439
Score = 36.2 bits (82), Expect = 0.085
Identities = 54/178 (30%), Positives = 69/178 (38%), Gaps = 49/178 (27%)
Query: 342 FSPSPRNSPRPSPKQSPRNSPRSRSPARGIEYSRVSPQPMISRLQQPRLSLQGHPTDLQT 401
+SP R SPR P SPR R+P R R+ P P R + P
Sbjct: 309 YSPRRRPSPRRRP------SPRRRTPPR-----RMPPPPRHRRSRSP------------- 344
Query: 402 SNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVP---NGGIPRMQPQASAIPSPG 458
+ RRS +LS +S+ S SSRS S + P PR + S SP
Sbjct: 345 -----VRRRRRSSASLSGSSS----SSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPP 395
Query: 459 KFR----SPAAPSPLALRQPVKAFSNHG-----SGSPG--SQEITQL--TQTTSSPGP 503
+ R PA P P P SN S SPG S ++T+ T+ SP P
Sbjct: 396 RRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSP 453
Score = 30.0 bits (66), Expect = 6.1
Identities = 50/233 (21%), Positives = 72/233 (30%), Gaps = 35/233 (15%)
Query: 200 YSPNASSPYSSGFNSPSSTPVRPPIVKQLILPGNSGNLKSSDRNPPLSPQSSIDSELSAS 259
YSP YS T PP K+ P + S PP S + S S
Sbjct: 596 YSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPS 655
Query: 260 ELDEDSIGSNYKLNDVTDVQILARMQEESLRQEYAATTSRRSSGSSCNSTRRGTFSDQEL 319
+ GS+ + AR + + R + + SS RRG S +
Sbjct: 656 LSSKHRKGSSPSRSTRE-----ARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQ- 709
Query: 320 DAQSLDDEDDNMHHAVYPAVNRFSPSPRNSP------RPSPKQSPRNSPRSRSPARGIEY 373
R SPSP P P PK+ + + S R +
Sbjct: 710 --------------------RRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSS 749
Query: 374 SRV---SPQPMISRLQQPRLSLQGHPTDLQTSNVKNEEKLRRSLPNLSRTSNT 423
SR SP+P + P +Q S +K + P+ S N+
Sbjct: 750 SRSVSGSPEPAAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPPRNS 802
>gi|239752594 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 673
Score = 50.1 bits (118), Expect = 6e-06
Identities = 74/289 (25%), Positives = 112/289 (38%), Gaps = 57/289 (19%)
Query: 339 VNRFSPSPRNSPRPSPKQSPRNSPRSRSPARGIEYS---RVSPQPMISRLQQPRL----- 390
++R SP+ PR SP SP + S P+ + R SP M+SR ++
Sbjct: 215 LSRASPTG-TPPRASPTGSPPRASLSMMPSTALLIRTPPRASPTGMLSRTSLTKMDSTAS 273
Query: 391 -----------SLQGHPTDLQTSNVKNEEKLRRSLPN------LSRTSNTQVDSVKS-SR 432
S G P+ S + L R LP LSRTS T++DS S SR
Sbjct: 274 ITRTPSRPSTASPTGTPSRASLSMTPSTASLMRMLPRASPTGMLSRTSLTKMDSTASISR 333
Query: 433 SDSNFQV---PNGGIPRMQPQ-ASAIPSPGKFRSPAAPSPLALRQPVKAFSNHGS----- 483
+ + P+ P +P AS +P + +PS +L S G+
Sbjct: 334 TPPRASITRTPSRASPTGKPSTASPTGTPSRASPTGSPSTASLTGLSSTASPTGTPPRAS 393
Query: 484 --GSPGSQEITQ----------LTQT-------TSSPGPPMVQSTVSANPPSNINSATLT 524
G+P + +T+ L++T T+SP +++ + PP + T +
Sbjct: 394 PTGTPSTASLTRKPPRASPTGMLSRTSITKMDSTASPTRTPPRASPTGTPPRASPTGTPS 453
Query: 525 R--PAGTTAMRSGLPRPSAPSAGGIPVPRSKLAQPVRRSLPAPKTYGSM 571
R P GT + S PS S G P S P R SL + S+
Sbjct: 454 RASPTGTQSTASPTGSPSTASPTGSPSTASPTGSPSRASLTRTPSRASL 502
Score = 44.7 bits (104), Expect = 2e-04
Identities = 60/237 (25%), Positives = 85/237 (35%), Gaps = 30/237 (12%)
Query: 343 SPSPRNSPRPSPKQSPRNSPRSRSPA---RGIEYSRVSPQPMISRL--------QQPRLS 391
+PS + R P+ SP P SP +++ I+R PR S
Sbjct: 169 TPSTASLTRTPPRASPTGMPSRTSPTGMPSTASLTKMDSTASITRTLSRASPTGTPPRAS 228
Query: 392 LQGHPTDLQTSNVKNEEKLRRSLPN------LSRTSNTQVDSVKSSRSDSNFQVPNGGIP 445
G P S + + L R+ P LSRTS T++DS S P
Sbjct: 229 PTGSPPRASLSMMPSTALLIRTPPRASPTGMLSRTSLTKMDSTASITR----------TP 278
Query: 446 RMQPQASAIPSPGKFRSPAAPSPLALRQPVKAFSNHGSGSPGSQEITQLTQTTS-SPGPP 504
AS +P + PS +L + + S G S S +T++ T S S PP
Sbjct: 279 SRPSTASPTGTPSRASLSMTPSTASLMRMLPRASPTGMLSRTS--LTKMDSTASISRTPP 336
Query: 505 MVQSTVSANPPSNINSATLTRPAGTTAMRSGLPRPSAPSAGGIPVPRSKLAQPVRRS 561
T + + S + P GT + S PS S G+ S P R S
Sbjct: 337 RASITRTPSRASPTGKPSTASPTGTPSRASPTGSPSTASLTGLSSTASPTGTPPRAS 393
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 49.3 bits (116), Expect = 1e-05
Identities = 62/230 (26%), Positives = 84/230 (36%), Gaps = 30/230 (13%)
Query: 344 PSPRNSPRPSPKQS-PRNSPRSRSPARGIEYSRVSPQPMISRLQQPRLS--LQGHPTDLQ 400
P + P+P PKQ P P + G S S QP + Q P +QG Q
Sbjct: 210 PLQQQPPKPIPKQQGPGRDPLQQD---GTPKSISSQQPEKIKSQPPGTGKPIQGPTQTPQ 266
Query: 401 TSNVKNEEKLRRSLPNLSRTSNTQVDSVKSSR---SDSNFQVPNGGIPRMQPQASAIPSP 457
T + K + S P + + +SVK S S Q P G P Q P
Sbjct: 267 TDHAKLPLQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQP 326
Query: 458 GKFRSPAAPS----PLA-----LRQPVKAFSNHGSGSPGSQEITQLTQTTSSPGPPMVQS 508
G + PA PS PLA ++ PV+ G+ P +Q + P P Q
Sbjct: 327 GPAKPPAQPSGLTKPLAQQPGTVKPPVQP---PGTTKPPAQPL--------GPAKPPAQQ 375
Query: 509 TVSANPPSNI-NSATLTRPAGTTAMRSGLPRPSAPSAGGIPVPRSKLAQP 557
T S P S L +P G + P P+ P + P+ QP
Sbjct: 376 TGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQP 425
Score = 39.7 bits (91), Expect = 0.008
Identities = 55/249 (22%), Positives = 92/249 (36%), Gaps = 18/249 (7%)
Query: 338 AVNRFSPSPRN-SPRP--SPKQSPRNSPRSRSPARGIEYSRVSPQPMISRLQQPR---LS 391
AV++ SP P+ SP+ +PKQ +P + P ++ + P Q P LS
Sbjct: 671 AVSKSSPQPQQTSPKKDAAPKQDLSKAPEPKKPPPLVKQPTLHGSPSAKAKQPPEADSLS 730
Query: 392 LQGHPTDLQTSNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQPQA 451
P + + +++ + P + D V SS + + +P+ ++Q QA
Sbjct: 731 KPAPPKEPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKPDIPSS---KVQSQA 787
Query: 452 SAIPSPGKFRSPAAPSPL--ALRQPVKAFSNHGSGSPGSQE--ITQLTQTTSSPGPPMVQ 507
+P A PS + V F + P S I+ ++ S G V
Sbjct: 788 EEKTTPPLKTDSAKPSQSFPPTGEKVSPFDSKAIPRPASDSKIISHPGPSSESKGQKQVD 847
Query: 508 STVSANPPSNINSATLTRPAGTTAMRSGLPRPSA--PSAG-GIPVPRSKLAQPVRRSLPA 564
P + +P M G P P P+AG +P P+ +P +S
Sbjct: 848 PVQKKEEPKKAQTKMSPKP-DAKPMPKGSPTPPGPRPTAGQTVPTPQQS-PKPQEQSRRF 905
Query: 565 PKTYGSMKD 573
GS+ D
Sbjct: 906 SLNLGSITD 914
Score = 37.4 bits (85), Expect = 0.038
Identities = 50/226 (22%), Positives = 76/226 (33%), Gaps = 26/226 (11%)
Query: 345 SPRNSPRPS-PKQSPRNSPRSRSPARGIEYSRVSPQPMISRLQQP---RLSLQGHPTDLQ 400
+P P P+ P +P+ + G++ +P P + +QQP ++ Q
Sbjct: 400 TPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKT 459
Query: 401 TSNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQPQASAIPSPGKF 460
++ K LP ++ Q K Q P P Q S P P +
Sbjct: 460 SAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPP-----QQPGSAKPPSQQPGSTKPPPQQ- 513
Query: 461 RSPAAPSPLALRQPVKAFSNHGSGSPGSQEITQLTQTTSSPGPPMVQSTVSANPPSNINS 520
PA PSP +QP GS P SQ+ + P P + S P S S
Sbjct: 514 PGPAKPSP---QQP-------GSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGS 563
Query: 521 ATLTRPAGTTAMRSGLPRPSAPSAGGIPVPRSKLAQPVRRSLPAPK 566
+P + P P + G+P L L P+
Sbjct: 564 GKPLQPPTVS------PSAKQPPSQGLPKTICPLCNTTELLLHVPE 603
Score = 32.3 bits (72), Expect = 1.2
Identities = 71/357 (19%), Positives = 129/357 (36%), Gaps = 40/357 (11%)
Query: 214 SPSSTPVRPPIVKQLILPG--NSGNLKSSDRNPPLSPQSSIDSELSASELDEDSIGSNYK 271
SPS+ +PP L P ++ S P++ ++ D S S
Sbjct: 715 SPSAKAKQPPEADSLSKPAPPKEPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATT 774
Query: 272 LNDVTDVQILARMQEESL----------RQEYAATTSRRSSGSSCNSTRRGTFSDQELDA 321
D+ ++ ++ +E++ Q + T + S S R SD ++ +
Sbjct: 775 KPDIPSSKVQSQAEEKTTPPLKTDSAKPSQSFPPTGEKVSPFDSKAIPRPA--SDSKIIS 832
Query: 322 QSLDDEDDNMHHAVYPAVNRFSPSP---RNSPRPSPKQSPRNSPRSRSP----ARGIEYS 374
+ V P + P + SP+P K P+ SP P + +
Sbjct: 833 HPGPSSESKGQKQVDPVQKKEEPKKAQTKMSPKPDAKPMPKGSPTPPGPRPTAGQTVPTP 892
Query: 375 RVSPQPMISRLQQPRLSLQ-GHPTDLQTSN-VKNEEKLRRSLPNLSRTSNTQVDSVKSSR 432
+ SP+P + Q R SL G TD S +E + L + +Q ++ S+
Sbjct: 893 QQSPKP---QEQSRRFSLNLGSITDAPKSQPTTPQETVTGKLFGFGASIFSQASNLISTA 949
Query: 433 SDSNFQVPNG-GIPRMQPQASAIP----SPGKFRSPAAPSPLALRQPVKAFSNHGSGSPG 487
+G G P Q A + P P K A P+P A PVK + +P
Sbjct: 950 GQPGPHSQSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPAP-AKSIPVKKETK----APA 1004
Query: 488 SQEITQLTQTTSSPGPPMVQSTVSANPPSNINSATLTRPAGTTAMRSGLPRPSAPSA 544
++++ + + P + ++ PP +S +LT + + L + P +
Sbjct: 1005 AEKL----EPKAEQAPTVKRTETEKKPPPIKDSKSLTAEPQKAVLPTKLEKSPKPES 1057
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 49.3 bits (116), Expect = 1e-05
Identities = 62/230 (26%), Positives = 84/230 (36%), Gaps = 30/230 (13%)
Query: 344 PSPRNSPRPSPKQS-PRNSPRSRSPARGIEYSRVSPQPMISRLQQPRLS--LQGHPTDLQ 400
P + P+P PKQ P P + G S S QP + Q P +QG Q
Sbjct: 210 PLQQQPPKPIPKQQGPGRDPLQQD---GTPKSISSQQPEKIKSQPPGTGKPIQGPTQTPQ 266
Query: 401 TSNVKNEEKLRRSLPNLSRTSNTQVDSVKSSR---SDSNFQVPNGGIPRMQPQASAIPSP 457
T + K + S P + + +SVK S S Q P G P Q P
Sbjct: 267 TDHAKLPLQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQP 326
Query: 458 GKFRSPAAPS----PLA-----LRQPVKAFSNHGSGSPGSQEITQLTQTTSSPGPPMVQS 508
G + PA PS PLA ++ PV+ G+ P +Q + P P Q
Sbjct: 327 GPAKPPAQPSGLTKPLAQQPGTVKPPVQP---PGTTKPPAQPL--------GPAKPPAQQ 375
Query: 509 TVSANPPSNI-NSATLTRPAGTTAMRSGLPRPSAPSAGGIPVPRSKLAQP 557
T S P S L +P G + P P+ P + P+ QP
Sbjct: 376 TGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQP 425
Score = 39.7 bits (91), Expect = 0.008
Identities = 55/249 (22%), Positives = 92/249 (36%), Gaps = 18/249 (7%)
Query: 338 AVNRFSPSPRN-SPRP--SPKQSPRNSPRSRSPARGIEYSRVSPQPMISRLQQPR---LS 391
AV++ SP P+ SP+ +PKQ +P + P ++ + P Q P LS
Sbjct: 671 AVSKSSPQPQQTSPKKDAAPKQDLSKAPEPKKPPPLVKQPTLHGSPSAKAKQPPEADSLS 730
Query: 392 LQGHPTDLQTSNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQPQA 451
P + + +++ + P + D V SS + + +P+ ++Q QA
Sbjct: 731 KPAPPKEPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATTKPDIPSS---KVQSQA 787
Query: 452 SAIPSPGKFRSPAAPSPL--ALRQPVKAFSNHGSGSPGSQE--ITQLTQTTSSPGPPMVQ 507
+P A PS + V F + P S I+ ++ S G V
Sbjct: 788 EEKTTPPLKTDSAKPSQSFPPTGEKVSPFDSKAIPRPASDSKIISHPGPSSESKGQKQVD 847
Query: 508 STVSANPPSNINSATLTRPAGTTAMRSGLPRPSA--PSAG-GIPVPRSKLAQPVRRSLPA 564
P + +P M G P P P+AG +P P+ +P +S
Sbjct: 848 PVQKKEEPKKAQTKMSPKP-DAKPMPKGSPTPPGPRPTAGQTVPTPQQS-PKPQEQSRRF 905
Query: 565 PKTYGSMKD 573
GS+ D
Sbjct: 906 SLNLGSITD 914
Score = 37.4 bits (85), Expect = 0.038
Identities = 50/226 (22%), Positives = 76/226 (33%), Gaps = 26/226 (11%)
Query: 345 SPRNSPRPS-PKQSPRNSPRSRSPARGIEYSRVSPQPMISRLQQP---RLSLQGHPTDLQ 400
+P P P+ P +P+ + G++ +P P + +QQP ++ Q
Sbjct: 400 TPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKT 459
Query: 401 TSNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQPQASAIPSPGKF 460
++ K LP ++ Q K Q P P Q S P P +
Sbjct: 460 SAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPP-----QQPGSAKPPSQQPGSTKPPPQQ- 513
Query: 461 RSPAAPSPLALRQPVKAFSNHGSGSPGSQEITQLTQTTSSPGPPMVQSTVSANPPSNINS 520
PA PSP +QP GS P SQ+ + P P + S P S S
Sbjct: 514 PGPAKPSP---QQP-------GSTKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGS 563
Query: 521 ATLTRPAGTTAMRSGLPRPSAPSAGGIPVPRSKLAQPVRRSLPAPK 566
+P + P P + G+P L L P+
Sbjct: 564 GKPLQPPTVS------PSAKQPPSQGLPKTICPLCNTTELLLHVPE 603
Score = 32.3 bits (72), Expect = 1.2
Identities = 71/357 (19%), Positives = 129/357 (36%), Gaps = 40/357 (11%)
Query: 214 SPSSTPVRPPIVKQLILPG--NSGNLKSSDRNPPLSPQSSIDSELSASELDEDSIGSNYK 271
SPS+ +PP L P ++ S P++ ++ D S S
Sbjct: 715 SPSAKAKQPPEADSLSKPAPPKEPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSATT 774
Query: 272 LNDVTDVQILARMQEESL----------RQEYAATTSRRSSGSSCNSTRRGTFSDQELDA 321
D+ ++ ++ +E++ Q + T + S S R SD ++ +
Sbjct: 775 KPDIPSSKVQSQAEEKTTPPLKTDSAKPSQSFPPTGEKVSPFDSKAIPRPA--SDSKIIS 832
Query: 322 QSLDDEDDNMHHAVYPAVNRFSPSP---RNSPRPSPKQSPRNSPRSRSP----ARGIEYS 374
+ V P + P + SP+P K P+ SP P + +
Sbjct: 833 HPGPSSESKGQKQVDPVQKKEEPKKAQTKMSPKPDAKPMPKGSPTPPGPRPTAGQTVPTP 892
Query: 375 RVSPQPMISRLQQPRLSLQ-GHPTDLQTSN-VKNEEKLRRSLPNLSRTSNTQVDSVKSSR 432
+ SP+P + Q R SL G TD S +E + L + +Q ++ S+
Sbjct: 893 QQSPKP---QEQSRRFSLNLGSITDAPKSQPTTPQETVTGKLFGFGASIFSQASNLISTA 949
Query: 433 SDSNFQVPNG-GIPRMQPQASAIP----SPGKFRSPAAPSPLALRQPVKAFSNHGSGSPG 487
+G G P Q A + P P K A P+P A PVK + +P
Sbjct: 950 GQPGPHSQSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPAP-AKSIPVKKETK----APA 1004
Query: 488 SQEITQLTQTTSSPGPPMVQSTVSANPPSNINSATLTRPAGTTAMRSGLPRPSAPSA 544
++++ + + P + ++ PP +S +LT + + L + P +
Sbjct: 1005 AEKL----EPKAEQAPTVKRTETEKKPPPIKDSKSLTAEPQKAVLPTKLEKSPKPES 1057
>gi|33667044 ABI gene family, member 3 (NESH) binding protein [Homo
sapiens]
Length = 1075
Score = 48.9 bits (115), Expect = 1e-05
Identities = 60/249 (24%), Positives = 95/249 (38%), Gaps = 40/249 (16%)
Query: 337 PAVNRFSPSPRNSPR--PSPKQSPR-----NSPRSRSPARGIEYSRVSPQPMIS-RLQQP 388
P V P+P+ +PR P PK SPR P + P R + SP P +S P
Sbjct: 525 PEVTHTKPAPKQTPRAPPKPKTSPRPRIPQTQPVPKVPQRVTAKPKTSPSPEVSYTTPAP 584
Query: 389 RLSLQGH---PTDLQTSNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVP-NGGI 444
+ L H P Q+ E + +P +S + + + +D + Q P I
Sbjct: 585 KDVLLPHKPYPEVSQSEPAPLETRGIPFIPMISPSPSQEELQTTLEETDQSTQEPFTTKI 644
Query: 445 PRMQPQASAIPSPGKFRSPA----------------APSPLALRQPVKAFSNHGSGSPGS 488
PR A +P +F + AP P + V S H + PG+
Sbjct: 645 PRTTELAKTTQAPHRFYTTVRPRTSDKPHIRPGVKQAPRPSGADRNVSVDSTHPTKKPGT 704
Query: 489 QEITQLTQTTSSPGPPMVQSTVSANPPSN--INSATLT--------RPAGTTAMR--SGL 536
+ + T P+ + V+ P S I+S +T RP GT R + +
Sbjct: 705 RRPPLPPRPTHPRRKPLPPNNVTGKPGSAGIISSGPITTPPLRSTPRPTGTPLERIETDI 764
Query: 537 PRPSAPSAG 545
+P+ P++G
Sbjct: 765 KQPTVPASG 773
Score = 32.0 bits (71), Expect = 1.6
Identities = 45/206 (21%), Positives = 78/206 (37%), Gaps = 21/206 (10%)
Query: 337 PAVNRFSPSPRNSPR--PSPKQSPRNSPRSRSPARGIEYSRVSPQPMISRLQQPRLSLQG 394
P + +P+P+ + +PK+ PR P P R ++P+ IS+ +P +
Sbjct: 451 PEMQPTTPAPQQTTSIPSTPKRRPRPKPPRTKPERTTSAGTITPK--ISKSPEPTWTT-- 506
Query: 395 HPTDLQTSNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQP----- 449
P +T + + K+ S P ++ T + ++ P IP+ QP
Sbjct: 507 -PAPGKTQFISLKPKIPLS-PEVTHTKPAPKQTPRAPPKPKT--SPRPRIPQTQPVPKVP 562
Query: 450 -QASAIP--SPGKFRSPAAPSPLALRQPVKAFSNHGSGSPGSQE---ITQLTQTTSSPGP 503
+ +A P SP S P+P + P K + P E I + + SP
Sbjct: 563 QRVTAKPKTSPSPEVSYTTPAPKDVLLPHKPYPEVSQSEPAPLETRGIPFIPMISPSPSQ 622
Query: 504 PMVQSTVSANPPSNINSATLTRPAGT 529
+Q+T+ S T P T
Sbjct: 623 EELQTTLEETDQSTQEPFTTKIPRTT 648
>gi|33946327 nucleoporin 214kDa [Homo sapiens]
Length = 2090
Score = 48.5 bits (114), Expect = 2e-05
Identities = 59/235 (25%), Positives = 95/235 (40%), Gaps = 41/235 (17%)
Query: 337 PAVNRFSPSP-RNSPRPSPKQSPRNSPRSRSPARG--IEYSRV-SPQPMISRLQQPRLSL 392
PAVN + S +N P+ Q +N+P + S A G + YS +P P++
Sbjct: 1106 PAVNTLTESTLKNVPQVVNVQELKNNPATPSTAMGSSVPYSTAKTPHPVL---------- 1155
Query: 393 QGHPTDLQTSNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQPQAS 452
T N+ K + +L + T SS ++ G +++ +
Sbjct: 1156 --------TPVAANQAKQGSLINSLKPSGPTPASGQLSSGDKAS------GTAKIETAVT 1201
Query: 453 AIPSP-GKFRSPAAPSP--------LALRQPVKAFSNHGSGSPGSQEITQLTQTTSSPGP 503
+ PS G+F P + SP + P F+ +P ++E +Q +S G
Sbjct: 1202 STPSASGQFSKPFSFSPSGTGFNFGIITPTPSSNFTAAQGATPSTKESSQPDAFSSGGGS 1261
Query: 504 -PMVQSTVSANPPSNINSATLTRPAGTTAMRSGLPRPSAPSAGGIPVPRSKLAQP 557
P ++ ++PPS I SA+ T P A S RP APS + SKL P
Sbjct: 1262 KPSYEAIPESSPPSGITSASNTTPGEPAASSS---RPVAPSGTALSTTSSKLETP 1313
Score = 33.5 bits (75), Expect = 0.55
Identities = 35/139 (25%), Positives = 52/139 (37%), Gaps = 19/139 (13%)
Query: 445 PRMQPQASAIPS--PGKFRSPAAPSPLALRQPVKAFSNHGSGSPGSQEITQLTQTTSSPG 502
P P SA+ KF + A +P++ Q S S S +
Sbjct: 574 PSFPPSTSAVKVNLSEKFTAAATSTPVSSSQSAPPMSPFSSASK------------PAAS 621
Query: 503 PPMVQSTVSANPPSNI--NSATLTRPAGTTAMRSGLPRPS-APSAGGIPVPRSKLAQPVR 559
P+ T + PPS++ S+ L P+G +A S P PS + I P +K P
Sbjct: 622 GPLSHPTPLSAPPSSVPLKSSVLPSPSGRSAQGSSSPVPSMVQKSPRITPPAAKPGSPQA 681
Query: 560 RSLPAPKTYGSMKDDSWKD 578
+SL + WKD
Sbjct: 682 KSL--QPAVAEKQGHQWKD 698
>gi|92091572 dedicator of cytokinesis 4 [Homo sapiens]
Length = 1966
Score = 47.8 bits (112), Expect = 3e-05
Identities = 69/281 (24%), Positives = 105/281 (37%), Gaps = 60/281 (21%)
Query: 336 YPAVNRFSPSPRNSP---------------------RPSPKQSPRNSPRSRSP---ARGI 371
YPAVNR+S S +S +PSP S +S S SP +
Sbjct: 1635 YPAVNRYSSSSLSSQASAEVSNITGQSESSDEVFNMQPSPSTSSLSSTHSASPNVTSSAP 1694
Query: 372 EYSRVSP-----------QPMISRLQQPRLSLQGHPTDLQTS-----NVKNEEKLRRSLP 415
+R SP +S ++P ++ +PT ++ S N + L RS P
Sbjct: 1695 SSARASPLLSDKHKHSRENSCLSPRERPCSAI--YPTPVEPSQRMLFNHIGDGALPRSDP 1752
Query: 416 NLSRTSNTQVDSVKSSRSDSNFQVPNGG------IPRMQPQASAIPSPGKFRSPAAPSPL 469
NLS + S DS + N P + P+ + SP + + +PSP
Sbjct: 1753 NLSAPEKAVNPTPSSWSLDSGKEAKNMSDSGKLISPPVPPRPTQTASPARHTTSVSPSP- 1811
Query: 470 ALRQPVKAFSNHGSGSPGSQEITQLTQTTSSPGPPMVQSTVSANPPSNINSATLTRPAGT 529
A R P+K + SP SPG +S + S I+S + + T
Sbjct: 1812 AGRSPLKGSVQSFTPSPVEYH---------SPGLISNSPVLSGSYSSGISSLSRCSTSET 1862
Query: 530 TAMRSGLPRPSAPSAGGIPVPRSKLA--QPVRRSLPAPKTY 568
+ + + SAP +PVP +PVR+ P Y
Sbjct: 1863 SGFENQVNEQSAPLPVPVPVPVPSYGGEEPVRKESKTPPPY 1903
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 47.4 bits (111), Expect = 4e-05
Identities = 60/228 (26%), Positives = 84/228 (36%), Gaps = 22/228 (9%)
Query: 344 PSPRNSPR-PSPKQSPRNSPRSRSPARGIEYSRVSPQPM-ISRLQQPRLSLQGHPTDLQT 401
P P+ P P+PKQ+P S S SP + +R +P P I P+ G PT
Sbjct: 894 PFPKEGPATPAPKQAPALSMTSSSPKK----ARATPAPKGIPASPSPK----GAPTP--P 943
Query: 402 SNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQPQASAIPSPGKFR 461
+ K + P+ + S + P G P A+ PSP
Sbjct: 944 AATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGA---PTPPAATPPSPKG-- 998
Query: 462 SPAAPSPLALRQPVKAFSNHGSGSPGSQEITQLTQTTSSPGPPMVQSTVSANP----PSN 517
PA PSP P GSP + + T + PP + + +A P
Sbjct: 999 GPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPT 1058
Query: 518 INSATLTRPAGTTAMRSGLPRPSAPSAGGIPVPRSKLAQPVRRSLPAP 565
+ATL P G A S P+ P+A P P+ A P + P P
Sbjct: 1059 TPAATLPSPKGGPATPSLKGAPTPPAATP-PSPKGGPATPSPKGAPMP 1105
Score = 42.7 bits (99), Expect = 0.001
Identities = 55/234 (23%), Positives = 81/234 (34%), Gaps = 24/234 (10%)
Query: 343 SPSPRNSPRP-SPKQSPRNSPRSRSPARGIEYS-RVSPQPMISRLQQPRLSLQGHPTDLQ 400
SP+ +SP P SPK +P S + +G+ + +P P + L P+ P Q
Sbjct: 849 SPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEG-PATPAPKQ 907
Query: 401 T---SNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGG----IPRMQPQASA 453
S + K R+ P + + + P GG P+ P A
Sbjct: 908 APALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPA 967
Query: 454 IPSPGKFRSPAAPSPLALRQPVKAFSNHGSGSPGSQEITQLTQTTSSPGPPMVQSTVSAN 513
P PA PSP P A G P ++P P + +
Sbjct: 968 ATPPSPKGGPATPSPKGAPTPPAATPPSPKGGP------------ATPSPKGAPTPPAVT 1015
Query: 514 PPSNINSATLTR-PAGTTAMRSGLPRPSAPSAGGIPVPRSKLAQPVRRSLPAPK 566
PPS S T P G + + P S P+P+ P +LP+PK
Sbjct: 1016 PPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPA-ATLPSPK 1068
Score = 38.5 bits (88), Expect = 0.017
Identities = 65/233 (27%), Positives = 84/233 (36%), Gaps = 45/233 (19%)
Query: 343 SPSPRNSPRPSPKQSPRNSPRSRSPARGIEYSRVSPQPMISRLQQPRLSLQGHPTD--LQ 400
+P+P PSPK P SP +P + P P S P +G PT +
Sbjct: 1286 APNPAVVTPPSPKGGPATSPPKGAPT---PPAATPPSPKGSPGTPPP---KGAPTPPAVT 1339
Query: 401 TSNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQPQASAIPSPGKF 460
+ K L + P+ S+ T S + + GG P M P PSP
Sbjct: 1340 PPSPKGTPTLPATTPS-SKGGPTTPSSKEGPTPPAATPSHKGG-PAMTP-----PSPK-- 1390
Query: 461 RSPAAPSPLALRQPVKAFSNHGSGSPGSQEITQLTQTTSSPGPPMVQSTVSANPPSNINS 520
R PA PSP G P S + L+ +P P+ + A PS
Sbjct: 1391 RGPAIPSP--------------KGDPTSPAVIPLS-PKKAPATPVTRE--GAATPS---K 1430
Query: 521 ATLTRPAGTTAMRSGLPRPSAPSAGGIPVPRSK-------LAQPVRRSLPAPK 566
LT PA T P SAP GG P SK + P + PAPK
Sbjct: 1431 GDLTPPAVTPVSLKKAPATSAPK-GGPATPSSKGDPTLPAVTPPSPKEPPAPK 1482
Score = 38.1 bits (87), Expect = 0.022
Identities = 112/540 (20%), Positives = 188/540 (34%), Gaps = 95/540 (17%)
Query: 46 PGSPV-RAGASIPSSGAASPRGF-PLGLS-AKSGGGPGSGPRRTSSEELRDATSLLAAGE 102
P +PV R GA+ PS G +P P+ L A + P GP SS+ ++
Sbjct: 1416 PATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSP 1475
Query: 103 GGLLDEVEPLRPDELERLSGWEEEEES-----------WLYSSPKKKLTPMQKSVSPLVW 151
EP P ++ S ++ + + SSPK+ P+
Sbjct: 1476 K------EPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAP 1529
Query: 152 CRQVLDYPSPDVECAKKSLIHKLDQTMSALKRQNLYNNPFNSMSYTSPYSPNASSPYSSG 211
+L +P K++LI S K + P + +P S ASSP
Sbjct: 1530 TATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAI---PTPKEAPATPSSKEASSP---- 1582
Query: 212 FNSPSSTPVR---PPIVKQLILPG--NSGNLKSSDRNPPLSPQSSIDSELSASELDEDS- 265
P+ TP P K+L++P S + K + P ++P S + + +
Sbjct: 1583 ---PAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTS 1639
Query: 266 ---IGSNYKLNDVTDVQILARMQEESLRQEYAATTSRRSSGSSCNSTRRGTFSDQELDAQ 322
S+ K + + + +M AT + S G ++G + +E+
Sbjct: 1640 PPVTPSSLKDSPTSPASVTCKM---------GATVPQASKGLPA---KKGPTALKEVLVA 1687
Query: 323 SLDDEDDNMHHAVYPAVNRFSPSPRNSPRPSPKQSPRNSPRSRSPARGIEYSRVSPQPMI 382
+ + A R P + S SP P P +++ ++G S V+P P++
Sbjct: 1688 PAPESTP-----IITAPTRKGPQTKKSSATSPPICP--DPSAKNGSKG-PLSTVAPAPLL 1739
Query: 383 SRLQQPRLSLQGHPTDLQTSNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNG 442
+ + +G + + S P + + +S+
Sbjct: 1740 PVQKDSSKTAKGKDASHSPKGPLAPPESKASTPLTAAAFEKVLPKPESA----------- 1788
Query: 443 GIPRMQPQASAIPSPGKFRSPAAPSPLALRQPVKAFSNHGSGSPGSQEITQLTQTTSSP- 501
SA PSP P APSP+ P + F SPG + ++ S P
Sbjct: 1789 -------SVSAAPSP-PVSLPLAPSPVPTLPPKQQFL---PSSPGL-----VLESPSKPL 1832
Query: 502 GPPMVQSTVSANPPSNINSATLTRPAGTTAMRSGLPRPSAPSAGGIPVPRSKLAQPVRRS 561
P + PP I+ G +S L P + GIPVP QPV ++
Sbjct: 1833 APADEDELLPLIPPEPIS--------GGVPFQSVLVNMPTPKSAGIPVPTPSAKQPVTKN 1884
Score = 36.6 bits (83), Expect = 0.065
Identities = 39/146 (26%), Positives = 51/146 (34%), Gaps = 13/146 (8%)
Query: 430 SSRSDSNFQVPNGGIPRMQPQASAIP--SPGKFRSPA--APSPLALRQPVKAFSNHGSGS 485
S S + P P+ P SA+ SP P P+P + P F G +
Sbjct: 846 SKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLP---FPKEGPAT 902
Query: 486 PGSQEITQLTQTTSSPGPPMVQSTVSANPPSNINSATLTRPAGTTAMRSGLP-RPS---- 540
P ++ L+ T+SSP P S T PA T G P PS
Sbjct: 903 PAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWA 962
Query: 541 -APSAGGIPVPRSKLAQPVRRSLPAP 565
P A P P+ A P + P P
Sbjct: 963 PTPPAATPPSPKGGPATPSPKGAPTP 988
Score = 36.2 bits (82), Expect = 0.085
Identities = 31/121 (25%), Positives = 44/121 (36%), Gaps = 16/121 (13%)
Query: 445 PRMQPQASAIPSPGKFRSPAAPSPLALRQPVKAFSNHGSGSPGSQEITQLTQTTSSPGPP 504
P+ P A+ P + PA P+P G+P S +T + S P
Sbjct: 1610 PKEAPTPPAVTPPSPEKGPATPAP--------------KGTPTSPPVTPSSLKDSPTSPA 1655
Query: 505 MVQSTVSANPPSNINSATLTRPAGTTAMRSGLPRPSAPSAGGIPVPRSKLAQPVRRSLPA 564
V + A P S L G TA++ L P+ S I P K Q + S +
Sbjct: 1656 SVTCKMGATVPQ--ASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATS 1713
Query: 565 P 565
P
Sbjct: 1714 P 1714
Score = 34.3 bits (77), Expect = 0.32
Identities = 54/237 (22%), Positives = 87/237 (36%), Gaps = 27/237 (11%)
Query: 343 SPSPRNSPRPSPKQSPRNSPRSRSPARGIEYSRVSPQPM-ISRLQQPRLSLQGHPTDLQT 401
+P+P + PSPK SP P +P + P P L S +G PT +
Sbjct: 1309 APTPPAATPPSPKGSPGTPPPKGAPT---PPAVTPPSPKGTPTLPATTPSSKGGPTTPSS 1365
Query: 402 SNVKNEEKL---RRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQP------QAS 452
+ P ++ S + ++ S + D P+ P + +
Sbjct: 1366 KEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGA 1425
Query: 453 AIPSPGKFRSPAAPSPLALRQ-PVKAFSNHGSGSPGSQEITQLTQTTSSPGPPMVQSTVS 511
A PS G +P A +P++L++ P + G +P S+ P P V
Sbjct: 1426 ATPSKGDL-TPPAVTPVSLKKAPATSAPKGGPATPSSK---------GDPTLPAVTPPSP 1475
Query: 512 ANPPSNINSATLTRPAGTTAMRSGLPRPSAPSAGGIP-VPRSKLAQPVRRSLPAPKT 567
PP+ AT + P A + + P+ P+ IP P+ A P R P T
Sbjct: 1476 KEPPAPKQVATSSSPKKAPATPAPMGAPTLPAV--IPSSPKEVPATPSSRRDPIAPT 1530
Score = 32.7 bits (73), Expect = 0.94
Identities = 51/246 (20%), Positives = 81/246 (32%), Gaps = 50/246 (20%)
Query: 343 SPSPRNSPRP--SPKQSPRNSPRSRSPARGIEYSRVSPQPMISRLQQPRLSL-----QGH 395
+PS + +P P + SP+ P + SP + +P P + P+ L +G
Sbjct: 1073 TPSLKGAPTPPAATPPSPKGGPATPSP-------KGAPMPPAATPPSPKGGLATPPHKGA 1125
Query: 396 PTDLQTSNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGI----PRMQPQA 451
PT + + L P + T+ P GG+ P+ P
Sbjct: 1126 PTTPAATPPSPKGGLATPPPKGAPTTPAATPPS-----------PKGGLATPPPKGAPTT 1174
Query: 452 SAIPSPGKFRSPAAPSPLALRQPVKAFSNHGSGSPGSQEITQLTQT--TSSPGPPMVQST 509
A P A PSP G+P + T + ++P P +T
Sbjct: 1175 PAATPPSPKGGLATPSP--------------KGAPTTPAATPPSPKGGLATPSPKGAPTT 1220
Query: 510 VSANPPSNINSATLTRPAGTTAMRSGLP-----RPSAPSAGGIPVPRSKLAQPVRRSLPA 564
+A PPS P G + P P+ P G P P + ++ L
Sbjct: 1221 PAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLAT 1280
Query: 565 PKTYGS 570
P G+
Sbjct: 1281 PPHKGA 1286
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 47.0 bits (110), Expect = 5e-05
Identities = 81/389 (20%), Positives = 130/389 (33%), Gaps = 75/389 (19%)
Query: 207 PYSSGFNSPSSTPVRPPIVKQLILP-GNSGNLKSSDRNPPLSPQSSIDSELSASE--LDE 263
P F + P PP K+ P G S +KS+ + P P ++ SE +E
Sbjct: 57 PDYESFCAEVHNPTSPPSSKKAPPPSGASQTIKSTTKRSPKPPNKKKTKKVIESEEITEE 116
Query: 264 DSIGSNYKLNDVTDVQILARMQEESLRQEYAATTSRRSSGSSCNSTRRGTFSDQELDAQS 323
S+ N QE ++++S SS S+ + S + Q
Sbjct: 117 HSVSEN---------------------QESSSSSSSSSSSSTIRKIKSSKNSAANRELQK 155
Query: 324 LDDEDDNMHHAVYPAVNRFSPSPRNSPRPSPKQSPRNSPRS----------RSPARGIEY 373
DN + R +P+PK + S ++
Sbjct: 156 KLKVKDNKKN-------------RTKKKPTPKPPVVDEAGSGLDNGDFKVTTPDTSTTQH 202
Query: 374 SRVSPQPMISRLQ--QPRLSLQGHP-TDLQTSNVKNEEKLRRSLPNLSRTSNTQVDSVKS 430
++VS P I+ + PR SL + T +TS N+E + + T D +
Sbjct: 203 NKVSTSPKITTAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEK 262
Query: 431 SRSDSNFQ----------VPNGGI-PRMQPQASAIPSPGKFRSPAAPSPLALRQPVKAFS 479
+ S Q P + + P+A +P P+P ++P
Sbjct: 263 TTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPA---- 318
Query: 480 NHGSGSPGSQEITQLTQTTSSPGPPMVQSTVSA-NPPSNINSATLTRPAGTTAMRSGLPR 538
S +P T + ++P P +T SA P T PA TT P+
Sbjct: 319 ---STTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTT------PK 369
Query: 539 PSAPSAGGIPVPRSKLAQPVRRSLPAPKT 567
AP+ P P + + P PAP T
Sbjct: 370 EPAPTTTKEPAPTTTKSAPTTPKEPAPTT 398
Score = 35.4 bits (80), Expect = 0.15
Identities = 46/237 (19%), Positives = 79/237 (33%), Gaps = 16/237 (6%)
Query: 344 PSPRNSPRPSPKQSPRNSPRSRSPARGIEYSRVSPQPMISRLQQPRLSLQGHPTDLQ--- 400
P+P P+P +P ++ PA + P P + P + PT +
Sbjct: 410 PAPTTPKEPTPTTPKEPAPTTKEPA---PTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPA 466
Query: 401 --TSNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQPQ-ASAIPSP 457
T+ + + P ++++ T + + S P P + A P
Sbjct: 467 PTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKE 526
Query: 458 GKFRSPAAPSPLALRQPV----KAFSNHGSGSPGSQEITQLTQTTSSPGPPMVQSTVSAN 513
+P P+P ++P K + + P + TT P ++
Sbjct: 527 PAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPT 586
Query: 514 PPSNINSATLTRPAGTT--AMRSGLPRPSAPSAGGIPVPRS-KLAQPVRRSLPAPKT 567
P + T +PA TT + P P+ P P + K A P PAP T
Sbjct: 587 TPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTT 643
Score = 35.4 bits (80), Expect = 0.15
Identities = 46/243 (18%), Positives = 86/243 (35%), Gaps = 16/243 (6%)
Query: 343 SPSPRNSPRPS-PKQSPRNSPRSRSPARGIEYSRVSPQ---PMISRLQQPRLSLQGHPTD 398
+P+ P P+ PK+ +P+ +P E + +P+ P + P + P +
Sbjct: 632 APNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKE 691
Query: 399 LQTSNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQ----VPNGGIPRMQPQASAI 454
L + K P + T + K + + P G P + +
Sbjct: 692 LAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPA-- 749
Query: 455 PSPGKFRSPAAPSPLALRQPVKAFSNHGSGSPGSQEITQLTQTTSSPGPPMVQSTVSANP 514
P+ K +P +P + P S+ + + + + + P T P
Sbjct: 750 PTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETP 809
Query: 515 P---SNINSATLTRPAGTTAMRSGLPRPSAPSAGGIPVPRSKLAQPVRRSLPAPKTYGSM 571
P S +++ T T+ TT +S P S P P P++ P +P KT +
Sbjct: 810 PPTTSEVSTPTTTKEP-TTIHKS--PDESTPELSAEPTPKALENSPKEPGVPTTKTPAAT 866
Query: 572 KDD 574
K +
Sbjct: 867 KPE 869
Score = 34.3 bits (77), Expect = 0.32
Identities = 49/249 (19%), Positives = 82/249 (32%), Gaps = 21/249 (8%)
Query: 337 PAVNRFSPSPRNSPRPSPKQSPRNSPRSRSPARGIEYSRVSPQ---PMISRLQQPRLSLQ 393
P + +P+ P P+ +S +P+ SP E + +P+ P + P +
Sbjct: 483 PTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKE 542
Query: 394 GHPTDLQTSNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQPQASA 453
PT + +K + P T ++ ++ P P P+ A
Sbjct: 543 PAPTTPKEPAPTTTKKPAPTTPK-EPAPTTPKETAPTTPKKLTPTTPEKLAP-TTPEKPA 600
Query: 454 IPSPGKF--RSPAAPSPLALRQPV----KAFSNHGSGSPGSQEITQLTQTTSSPGPPMVQ 507
+P + +P P+P +P KA + + P + TT P
Sbjct: 601 PTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTP 660
Query: 508 STVSANPPSNINSATLTRPAGTTAMRSGLPRPSAPSAGGIPVPRS---------KLAQPV 558
+ P TL PA TT + P+ AP+ P + K P
Sbjct: 661 KETAPTTPKGTAPTTLKEPAPTTPKKPA-PKELAPTTTKEPTSTTCDKPAPTTPKGTAPT 719
Query: 559 RRSLPAPKT 567
PAP T
Sbjct: 720 TPKEPAPTT 728
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 47.0 bits (110), Expect = 5e-05
Identities = 81/389 (20%), Positives = 130/389 (33%), Gaps = 75/389 (19%)
Query: 207 PYSSGFNSPSSTPVRPPIVKQLILP-GNSGNLKSSDRNPPLSPQSSIDSELSASE--LDE 263
P F + P PP K+ P G S +KS+ + P P ++ SE +E
Sbjct: 98 PDYESFCAEVHNPTSPPSSKKAPPPSGASQTIKSTTKRSPKPPNKKKTKKVIESEEITEE 157
Query: 264 DSIGSNYKLNDVTDVQILARMQEESLRQEYAATTSRRSSGSSCNSTRRGTFSDQELDAQS 323
S+ N QE ++++S SS S+ + S + Q
Sbjct: 158 HSVSEN---------------------QESSSSSSSSSSSSTIRKIKSSKNSAANRELQK 196
Query: 324 LDDEDDNMHHAVYPAVNRFSPSPRNSPRPSPKQSPRNSPRS----------RSPARGIEY 373
DN + R +P+PK + S ++
Sbjct: 197 KLKVKDNKKN-------------RTKKKPTPKPPVVDEAGSGLDNGDFKVTTPDTSTTQH 243
Query: 374 SRVSPQPMISRLQ--QPRLSLQGHP-TDLQTSNVKNEEKLRRSLPNLSRTSNTQVDSVKS 430
++VS P I+ + PR SL + T +TS N+E + + T D +
Sbjct: 244 NKVSTSPKITTAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEK 303
Query: 431 SRSDSNFQ----------VPNGGI-PRMQPQASAIPSPGKFRSPAAPSPLALRQPVKAFS 479
+ S Q P + + P+A +P P+P ++P
Sbjct: 304 TTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPA---- 359
Query: 480 NHGSGSPGSQEITQLTQTTSSPGPPMVQSTVSA-NPPSNINSATLTRPAGTTAMRSGLPR 538
S +P T + ++P P +T SA P T PA TT P+
Sbjct: 360 ---STTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTT------PK 410
Query: 539 PSAPSAGGIPVPRSKLAQPVRRSLPAPKT 567
AP+ P P + + P PAP T
Sbjct: 411 EPAPTTTKEPAPTTTKSAPTTPKEPAPTT 439
Score = 35.4 bits (80), Expect = 0.15
Identities = 46/237 (19%), Positives = 79/237 (33%), Gaps = 16/237 (6%)
Query: 344 PSPRNSPRPSPKQSPRNSPRSRSPARGIEYSRVSPQPMISRLQQPRLSLQGHPTDLQ--- 400
P+P P+P +P ++ PA + P P + P + PT +
Sbjct: 451 PAPTTPKEPTPTTPKEPAPTTKEPA---PTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPA 507
Query: 401 --TSNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQPQ-ASAIPSP 457
T+ + + P ++++ T + + S P P + A P
Sbjct: 508 PTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKE 567
Query: 458 GKFRSPAAPSPLALRQPV----KAFSNHGSGSPGSQEITQLTQTTSSPGPPMVQSTVSAN 513
+P P+P ++P K + + P + TT P ++
Sbjct: 568 PAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPT 627
Query: 514 PPSNINSATLTRPAGTT--AMRSGLPRPSAPSAGGIPVPRS-KLAQPVRRSLPAPKT 567
P + T +PA TT + P P+ P P + K A P PAP T
Sbjct: 628 TPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTT 684
Score = 35.4 bits (80), Expect = 0.15
Identities = 46/243 (18%), Positives = 86/243 (35%), Gaps = 16/243 (6%)
Query: 343 SPSPRNSPRPS-PKQSPRNSPRSRSPARGIEYSRVSPQ---PMISRLQQPRLSLQGHPTD 398
+P+ P P+ PK+ +P+ +P E + +P+ P + P + P +
Sbjct: 673 APNTPKEPAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKE 732
Query: 399 LQTSNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQ----VPNGGIPRMQPQASAI 454
L + K P + T + K + + P G P + +
Sbjct: 733 LAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPA-- 790
Query: 455 PSPGKFRSPAAPSPLALRQPVKAFSNHGSGSPGSQEITQLTQTTSSPGPPMVQSTVSANP 514
P+ K +P +P + P S+ + + + + + P T P
Sbjct: 791 PTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETP 850
Query: 515 P---SNINSATLTRPAGTTAMRSGLPRPSAPSAGGIPVPRSKLAQPVRRSLPAPKTYGSM 571
P S +++ T T+ TT +S P S P P P++ P +P KT +
Sbjct: 851 PPTTSEVSTPTTTKEP-TTIHKS--PDESTPELSAEPTPKALENSPKEPGVPTTKTPAAT 907
Query: 572 KDD 574
K +
Sbjct: 908 KPE 910
Score = 34.3 bits (77), Expect = 0.32
Identities = 49/249 (19%), Positives = 82/249 (32%), Gaps = 21/249 (8%)
Query: 337 PAVNRFSPSPRNSPRPSPKQSPRNSPRSRSPARGIEYSRVSPQ---PMISRLQQPRLSLQ 393
P + +P+ P P+ +S +P+ SP E + +P+ P + P +
Sbjct: 524 PTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKE 583
Query: 394 GHPTDLQTSNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQPQASA 453
PT + +K + P T ++ ++ P P P+ A
Sbjct: 584 PAPTTPKEPAPTTTKKPAPTTPK-EPAPTTPKETAPTTPKKLTPTTPEKLAP-TTPEKPA 641
Query: 454 IPSPGKF--RSPAAPSPLALRQPV----KAFSNHGSGSPGSQEITQLTQTTSSPGPPMVQ 507
+P + +P P+P +P KA + + P + TT P
Sbjct: 642 PTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTP 701
Query: 508 STVSANPPSNINSATLTRPAGTTAMRSGLPRPSAPSAGGIPVPRS---------KLAQPV 558
+ P TL PA TT + P+ AP+ P + K P
Sbjct: 702 KETAPTTPKGTAPTTLKEPAPTTPKKPA-PKELAPTTTKEPTSTTCDKPAPTTPKGTAPT 760
Query: 559 RRSLPAPKT 567
PAP T
Sbjct: 761 TPKEPAPTT 769
>gi|50659104 RAB11 family interacting protein 1 isoform 3 [Homo
sapiens]
Length = 1283
Score = 47.0 bits (110), Expect = 5e-05
Identities = 56/247 (22%), Positives = 102/247 (41%), Gaps = 17/247 (6%)
Query: 312 GTFSDQELDAQSLDDEDDNMHHAVYPAVNRFSPSPRNSPRPSPKQSPRNSPRSRSPA--R 369
G SD++L S D +M Y S R + P+ ++ + + S+ P R
Sbjct: 374 GLSSDRQLSESSTKDSLKSMTLPSYRPAPLVSGDLRENMAPANSEATKEAKESKKPESRR 433
Query: 370 GIEYSRVSPQPMISRLQQPR--LSLQGHPTDLQTSNVKNEEKLRRSLPNLSRTSNTQVDS 427
S ++ + +++ + L++ G + VK E +L R S +
Sbjct: 434 SSLLSLMTGKKDVAKGSEGENPLTVPGREKEGMLMGVKPGEDASGPAEDLVRRSEKDTAA 493
Query: 428 VKSSRSDSN--FQVPNGGIPRMQPQASAIPSPGKFRSPAAPSPLALRQPVKAFSNHGSGS 485
V S + S F+ P +P++ + P P SP AP A++ ++ S
Sbjct: 494 VVSRQGSSLNLFEDVQITEPEAEPESKSEPRP-PISSPRAPQTRAVKPRLEV-------S 545
Query: 486 PGSQEITQLTQTTSSPG--PPMVQSTVSANPPSNINSATLTRPAGTTAMRSGLPRP-SAP 542
P +Q +L T SP PP+ S+ A+ PS + T+ + + ++ S L P +AP
Sbjct: 546 PEAQPTARLPSPTDSPSSLPPLPSSSGQASVPSELGHGADTQSSESPSVFSSLSSPIAAP 605
Query: 543 SAGGIPV 549
+ P+
Sbjct: 606 ISTSTPI 612
>gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens]
Length = 1499
Score = 47.0 bits (110), Expect = 5e-05
Identities = 65/241 (26%), Positives = 93/241 (38%), Gaps = 17/241 (7%)
Query: 344 PSPRNSPRPSPKQSPRNSPRSRSPARGIEYSRVSPQPMISRLQQPRLSLQGHPTDLQTS- 402
P P S P S N R P+ P + L+ P LS P S
Sbjct: 891 PLPPASNPPGTVHSAPNRGLGRRPSDLTISINQMGSPGMGHLKSPTLSQVHSPLVTSPSA 950
Query: 403 NVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQPQASAIPSPGKFRS 462
N+K+ + + +P S + S + S + + P G R++ + A+PSPG S
Sbjct: 951 NLKSPQTPSQMVPLPSANPPGPLKSPQVLGSSLSVRSPTGSPSRLKSPSMAVPSPGWVAS 1010
Query: 463 P--AAPSPLALRQPVKAFSNHGSGSPGSQEITQLTQTTSSP-GPPMVQSTVSANPPSNIN 519
P A PSP + Q + N S S ++ + Q T P GP S ANPPS +
Sbjct: 1011 PKTAMPSP-GVSQNKQPPLNMNS----STTLSNMEQGTLPPSGPRSSSSAPPANPPSGLM 1065
Query: 520 SATLTRPAGTTAMRSGLPRPSAPSAGGIPVPRSKLAQPVRRSL--PAPKTYGSMKDDSWK 577
+ +L + S P PS + SK A P L A KT + D+
Sbjct: 1066 NPSLPFTS------SPDPTPSQNPLSLMMTQMSKYAMPSSTPLYHNAIKTIATSDDELLP 1119
Query: 578 D 578
D
Sbjct: 1120 D 1120
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 46.6 bits (109), Expect = 6e-05
Identities = 74/270 (27%), Positives = 101/270 (37%), Gaps = 54/270 (20%)
Query: 344 PSPRNSPRPSPKQSPRNSPRSRSPARGIEYSRVSPQPM--ISRLQQPRL----SLQGHPT 397
PSP P SP +P S++P +P + I +Q P SLQ P+
Sbjct: 346 PSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPPS 405
Query: 398 DLQTSNVKNEEKLRRSLPNLSRTSN--------TQVDSVKSSRSDSN------FQVPNGG 443
L S+++ L P L T + TQ SR S Q P
Sbjct: 406 PLALSSLQATTSL--GSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAPLS- 462
Query: 444 IPRMQP-QASAIPSPGKFRSPAAPSPLALRQPVKAFSNHGSGSPGSQEITQLTQTTSSPG 502
+P P Q S P+ SP PL Q + + ++H +P S I +T SS
Sbjct: 463 LPASPPLQTSLSPAVSPLSSPLTIHPL---QALSSLASHSPQAPLSSLIMPPLETQSSLA 519
Query: 503 PPMVQSTVS-------------ANPPSNINSATLTRPAGTT----------AMRSGL--P 537
PP +Q+ + A PP SA LT P T A S L P
Sbjct: 520 PPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTP 579
Query: 538 RPSAPSAGGIPVPRS--KLAQPVRRSLPAP 565
P PS+ P P++ LA P + LP+P
Sbjct: 580 PPETPSSIATPPPQAPPALASPPLQGLPSP 609
Score = 39.7 bits (91), Expect = 0.008
Identities = 87/376 (23%), Positives = 122/376 (32%), Gaps = 48/376 (12%)
Query: 195 SYTSPYSPNASSPYSSGFNSPSSTPVRPPIVKQLILPGNSGNLKSSDRNPPLSPQSSIDS 254
S TSP P ++ P S +P S P PP+ L S PLS +I
Sbjct: 440 SLTSPSRPASTPPDSPPLQAPLSLPASPPLQTSL-----------SPAVSPLSSPLTIHP 488
Query: 255 ELSASELDEDSIGSNYKLNDVTDVQILARMQEESLRQEYAATTSRRSSGSSCNSTRRGTF 314
+ S L S + + ++ + + SL+ A+ T+ +
Sbjct: 489 LQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQT 548
Query: 315 SDQELDAQSLDDEDDNMHHAVYPAVNRFSPSPRNSPRPSPKQSPRNSPRSRSPARGIEYS 374
+ L L+ P + PSP +P P S P PA
Sbjct: 549 ASAPLTTPHLETPP-----CPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPL 603
Query: 375 RVSPQPMISRLQQPRLSLQGHPTDLQTSNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSD 434
+ P P +S L P Q P +LP L + S +
Sbjct: 604 QGLPSPPLSPLATP--PPQAPP--------------XLALPPLQAPPSPPASPPLSPLAT 647
Query: 435 SNFQVPNG-GIPRMQPQASAIPSP---GKFRSPAAPSPLALRQPVKAFSNHGSGSPGSQE 490
+ Q PN + +Q S PSP F PA+P PV + S +P S
Sbjct: 648 PSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASP-------PVSPSATPPSQAPPSLA 700
Query: 491 ITQLTQTTSSP-GPPMVQSTVSANPPSNINSATLTRPAGTTAMRSGLPRPSAPSAGGIPV 549
L S P PPM + SA PP P P P +PSA P
Sbjct: 701 APPLQVPPSPPASPPM---SPSATPPPQAPPPLAAPPLQVPPSPPASP-PMSPSATPPPR 756
Query: 550 PRSKLAQPVRRSLPAP 565
LA P + P+P
Sbjct: 757 VPPLLAAPPLQVPPSP 772
Score = 36.2 bits (82), Expect = 0.085
Identities = 59/225 (26%), Positives = 78/225 (34%), Gaps = 16/225 (7%)
Query: 342 FSPSPRN------SPRPSPKQSPRNSPRSRSP-ARGIEYSRVSPQPMISRLQQPRLSLQG 394
FSP P SP SP SP +P S++P + +V P P S P +
Sbjct: 665 FSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPP 724
Query: 395 H-PTDLQTSNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQPQASA 453
P L ++ S P S T V + QVP + A
Sbjct: 725 QAPPPLAAPPLQVPPSPPASPP--MSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLA 782
Query: 454 IPSPGKFRSPAAPSPLALRQPVKAFSNHGSGSPGSQEITQLTQTTSSPGPPMVQSTVSAN 513
P P + A P AL P +F SP + T PP++ + +
Sbjct: 783 KPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQV 842
Query: 514 PPSNINSATLTRP-----AGTTAMRSGLPRPSAPSAGGIPVPRSK 553
PPS S TL P G SG PR + A G P P S+
Sbjct: 843 PPSPPASPTLQAPRRPPTPGPDTSVSG-PRLTLALAPGPPPPPSR 886
Score = 34.7 bits (78), Expect = 0.25
Identities = 53/223 (23%), Positives = 71/223 (31%), Gaps = 55/223 (24%)
Query: 344 PSPRNSPRPSPKQSPRNSPRSRSPARGIEYSRVSPQPMISRLQQPRLSLQGHPTDLQTSN 403
P+P PRP P + PR S S S E+S P P R LQ
Sbjct: 192 PAPSARPRP-PTEGPRKSVSSAS-----EHSTTEPSPAARRRPSAGGGLQR--------- 236
Query: 404 VKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQPQASAIPSPGKFRSP 463
+SRS S+ P R P A P S
Sbjct: 237 -------------------------PASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQ 271
Query: 464 AAPSPLALRQPVKAFSNHGSGSPGSQEITQLTQTTSSPGPPMVQSTVSANPPSNINSATL 523
P L +P + +P ++ T SP + PP N
Sbjct: 272 PKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKAR---PVPPPDN------ 322
Query: 524 TRPAGTTAMRSGLPRPSAPSAGGIPV-PRSKLAQPVRRSLPAP 565
T + + LP PS P A +P+ P S A P ++LP+P
Sbjct: 323 ----AATPLPATLP-PSPPLATPLPLAPPSPSAPPSLQTLPSP 360
Score = 32.3 bits (72), Expect = 1.2
Identities = 56/228 (24%), Positives = 76/228 (33%), Gaps = 34/228 (14%)
Query: 38 VQGAGSLGPGSPVRAGASIPSSGAASPRGFPLGLSAKSGGGP---------GSGPRRTSS 88
+Q S P PV+A S P+S SP P + S P S P S+
Sbjct: 661 LQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSA 720
Query: 89 EELRDATSLLAAGEGGLLDEVEPLRPDELERLSGWEEEEESWLYSSPKKKLTPMQKSVSP 148
A LAA +V P P S P V P
Sbjct: 721 TPPPQAPPPLAAPPL----QVPPSPPA-----------------SPPMSPSATPPPRVPP 759
Query: 149 LVWCRQVLDYPSPDVECAKKSLIHKLDQTMSALKRQNLYNNPFNSMSYT--SPYSPNASS 206
L+ + PSP L Q AL L P S+ +P+SP+AS
Sbjct: 760 LLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASL 819
Query: 207 PYSSGFNSPSSTP--VRPPIVKQLILPGNSGNLKSSDRNPPLSPQSSI 252
P S P P + P+++ P S L++ R P P +S+
Sbjct: 820 PMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSV 867
Score = 31.2 bits (69), Expect = 2.7
Identities = 51/227 (22%), Positives = 79/227 (34%), Gaps = 26/227 (11%)
Query: 346 PRNSPRPSPKQSPRNS---PRSRSPARGIEYSRVSPQPMISRLQQPRLSLQGHPTDLQTS 402
P ++PR P +S S P SR PA G R P +S G +
Sbjct: 71 PESAPRAGPTRSAGTSSRNPASRPPASG----RGERAPPAKNTSPGPVSSPGRASGTTRP 126
Query: 403 NVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQPQASAIPSPGKFR- 461
++ LR S +S+ S + +G P PSP R
Sbjct: 127 GPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTP-------GTPSPAMARR 179
Query: 462 SPAAPSPLALRQPVKAFSNHGSGSPGSQEITQLTQTTSSPGPPMVQSTVSANPPSNINSA 521
S AA + + L +P + + ++ ++ +++ P + SA
Sbjct: 180 SRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAG-------G 232
Query: 522 TLTRPAGTTAMRSGLPRPS----APSAGGIPVPRSKLAQPVRRSLPA 564
L RPA + S P S PSA G P + +QP + L A
Sbjct: 233 GLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQA 279
>gi|253970412 G-2 and S-phase expressed 1 [Homo sapiens]
Length = 739
Score = 46.2 bits (108), Expect = 8e-05
Identities = 64/275 (23%), Positives = 106/275 (38%), Gaps = 26/275 (9%)
Query: 321 AQSLDDEDDNMHHAVYPAVNRFSPSPRNSPRPSPKQSP---RNSPRSRSPARGIEYSRVS 377
+ S +EDD + + R + P P+Q P SP + SP G ++ V
Sbjct: 43 SSSSANEDDEVFFGPFGHKERCIAASLELNNPVPEQPPLPTSESPFAWSPLAGEKFVEVY 102
Query: 378 PQPMISRLQ-----QPRLSLQGHPTDLQTSNVKN---EEKLRRSLPNLSRTSNTQVDSVK 429
+ + L + + + P D ++ V+ E KL+ +L + S+K
Sbjct: 103 KEAHLLALHIESSSRNQAAQAAKPEDPRSQGVERFIQESKLKINLFEKEKEMKKSPTSLK 162
Query: 430 SSR---SDSNFQVPNGGIPRMQPQASAIPSPG-KFRSPAAPSP--LALRQPVKAFSNHGS 483
SDS P G PR+ + A+PS G + R AP P A P ++ + H +
Sbjct: 163 RETYYLSDSPLLGPPVGEPRLLASSPALPSSGAQARLTRAPGPPHSAHALPRESCTAHAA 222
Query: 484 G------SPGSQEITQLTQTTSSPGPPMVQSTVSANPPSNINSATLTRPAGTTAMRSGLP 537
PG++ + + P P++ + + PA + R LP
Sbjct: 223 SQAATQRKPGTKLLLPRAASVRGRSIPGAAEKPKKEIPASPSRTKI--PAEKESHRDVLP 280
Query: 538 RPSAPSAGGIPVPRSKLAQPVRRSLPAPKTYGSMK 572
AP A +P S L Q +R++P P G K
Sbjct: 281 DKPAPGAVNVPAAGSHLGQG-KRAIPVPNKLGLKK 314
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 46.2 bits (108), Expect = 8e-05
Identities = 60/240 (25%), Positives = 91/240 (37%), Gaps = 19/240 (7%)
Query: 337 PAVNRFSPSPRNSPRPSPKQSPRN-SPRSRSPARGIEYSRVSPQPMISRLQQPRLSLQGH 395
PAV+ +P P +P +Q P+ +P++ +P + +PQP P + G
Sbjct: 629 PAVS--TPLPLGLQQPQAQQPPQAPTPQAAAPPQA-----TTPQPSPGLASSPEKIVLGQ 681
Query: 396 PTDLQTSNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQPQASAIP 455
P + + ++ L+ LP + + Q S + V P Q A A P
Sbjct: 682 PPSATPTAILTQDSLQMFLP---QERSQQPLSAEGPHLSVPASVIVSAPPPAQDPAPATP 738
Query: 456 -SPGKFRSPAAP----SPLALRQPVKAFSNHGSGSPGSQEITQLTQTTSSPGPPMVQST- 509
+ G P AP SP Q A G G S + SP P T
Sbjct: 739 VAKGAGLGPQAPDSQASPAPAPQIPAAAPLKGPGPSSSPSLPHQAPLGDSPHLPSPHPTR 798
Query: 510 VSANPPSNINSATLTRPAGTTAMRSGLPRPSAPSAGGIPVPRSKLAQPVRRSLPAPKTYG 569
+ PPS S ++RP + P + P+ GI V +++L P S PAP G
Sbjct: 799 PPSRPPSRPQS--VSRPPSEPPLHPCPPPQAPPTLPGIFVIQNQLGVPPPASNPAPTAPG 856
Score = 33.1 bits (74), Expect = 0.72
Identities = 57/234 (24%), Positives = 79/234 (33%), Gaps = 37/234 (15%)
Query: 338 AVNRFSPSPRNSPRPSPKQSPRNSPRSR--SPARGIEYSRVSPQPMISRLQQPRLSLQGH 395
+V+R P P P P Q+P P G+ +P P QP L Q
Sbjct: 809 SVSRPPSEPPLHPCPPP-QAPPTLPGIFVIQNQLGVPPPASNPAPTAPGPPQPPLRPQSQ 867
Query: 396 PTDLQTSNVKNEEKLRRSLPNLSRTSNTQVDSVKSSR------SDSNFQVPNGGIPRM-- 447
P + + LP S +S S SSR SD Q P P
Sbjct: 868 PPEGPLPPAPH-------LPPSSTSSAVASSSETSSRLPAPTPSDFQLQFPPSQGPHKSP 920
Query: 448 ----------QPQASAIPSPGKFRSPAAPSPLALRQPVKAFSNHGSGSPGSQEITQLTQT 497
+P A P P F+ P P AL QP G + Q
Sbjct: 921 TPPPTLHLVPEPAAPPPPPPRTFQMVTTPFP-ALPQPKALLERFHQVPSGI-----ILQN 974
Query: 498 TSSPGPPMVQSTVSANPPSNINSATLTR---PAGTTAMRSGLPRPSAPSAGGIP 548
+ P Q++ S P ++ ++ L P+GT S P P+ +A G+P
Sbjct: 975 KAGGAPAAPQTSTSLGPLTSPAASVLVSGQAPSGTPTAPSHAPAPAPMAATGLP 1028
>gi|85815829 SH3-domain binding protein 1 [Homo sapiens]
Length = 701
Score = 46.2 bits (108), Expect = 8e-05
Identities = 56/214 (26%), Positives = 82/214 (38%), Gaps = 28/214 (13%)
Query: 344 PSPRNSPRPSPKQSPRNSPRSRSPA-RGIEYSRVSPQPMISRLQQPRLSLQGHPTDLQTS 402
P+P +P P+P +P +P S A + S V P+P P+++ T
Sbjct: 505 PTPATTPAPAPAPAPAPAPALASAATKERTESEVPPRP-----ASPKVTRSPPETAAPVE 559
Query: 403 NVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNG--GIPRMQPQASAIPSPGKF 460
++ K R P QV +SS +G G P+ P+ S
Sbjct: 560 DMARRTK--RPAPARPTMPPPQVSGSRSSPPAPPLPPGSGSPGTPQALPRRLVGSS---L 614
Query: 461 RSPAAPSPL--ALRQPVKAFSNHGSGSPGSQEITQLTQTTSSPGPPMVQSTVSANPPSNI 518
R+P P PL QP + S SP + +SPGP S VS + P+ +
Sbjct: 615 RAPTVPPPLPPTPPQPARRQSRRSPASP----------SPASPGPAS-PSPVSLSNPAQV 663
Query: 519 NSATLTRPAGTTAMRSGLPRPSAPSAGGIPVPRS 552
+ T G SG+P P P+ P PRS
Sbjct: 664 DLGAATAEGGAPEAISGVPTP--PAIPPQPRPRS 695
Score = 33.5 bits (75), Expect = 0.55
Identities = 29/118 (24%), Positives = 45/118 (38%), Gaps = 6/118 (5%)
Query: 449 PQASAIPSPGKFRSPAAPSPLALRQPVKAFSNHGSGSPGSQEITQLTQTTSSPGPPMVQS 508
P + P+P +PA LA + + P S ++T+ T++P M +
Sbjct: 505 PTPATTPAPAPAPAPAPAPALASAATKERTESEVPPRPASPKVTRSPPETAAPVEDMARR 564
Query: 509 TVSANPPSNINSATLTRPAGTTAMRSGLPRPSAPSAGGIP-VPRSKLAQPVRRSLPAP 565
T P + P + RS P P P G P P++ + V SL AP
Sbjct: 565 TKRPAP-----ARPTMPPPQVSGSRSSPPAPPLPPGSGSPGTPQALPRRLVGSSLRAP 617
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 45.8 bits (107), Expect = 1e-04
Identities = 51/229 (22%), Positives = 86/229 (37%), Gaps = 23/229 (10%)
Query: 341 RFSPSPRNSPR-PSPKQSPRNSPRSRSPARGIEYSRVSPQPMISRLQQPRLSLQGHPTDL 399
+ PSP N P+ P+P Q P++ ++ S V+P +++ Q P ++ T +
Sbjct: 73 KLPPSPNNPPKFPNPHQPPKHPDKNSSV--------VNPT-LVATTQIPSVTFPSASTKI 123
Query: 400 QTSNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQPQASAIPSPGK 459
T + N L ++ +S N S ++ + N P ++ P+P
Sbjct: 124 TT--LPNVTFLPQNATTISSRENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPS 181
Query: 460 FRSP-----AAPSPLALRQPVKAFSNHGSGSPGSQEITQLTQTTSSPGPPMVQSTVSANP 514
+P A P+P A Q + S +P T ++P PP +
Sbjct: 182 SSAPPETTAAPPTPSATTQAPPS-----SSAPPETTAAPPTPPATTPAPPSSSAPPETTA 236
Query: 515 PSNINSATLTRPAGTTAMRSGLPRPSAPSAGGIPVPRSKLAQPVRRSLP 563
SAT P ++A P PSA + P S A P + P
Sbjct: 237 APPTPSATTPAPLSSSAPPETTAVPPTPSATTLD-PSSASAPPETTAAP 284
Score = 31.2 bits (69), Expect = 2.7
Identities = 30/132 (22%), Positives = 50/132 (37%), Gaps = 8/132 (6%)
Query: 438 QVPNGGIPRMQPQASAIPSPGKFRSPAAPSPLALRQPVKAFSNHGSGSPGSQEITQLTQT 497
Q+P+ P + + +P+ P + ++ R+ V S+ + +P + Q T
Sbjct: 110 QIPSVTFPSASTKITTLPNVTFL--PQNATTISSRENVNTSSSVATLAPVNSPAPQDT-- 165
Query: 498 TSSPGPPMVQSTVSANPPSNINSATLTRPAGTTAMRSGLPRPSAP--SAGGIPVPRSKLA 555
+ PP +T A P S+ T P +A P SAP + P P +
Sbjct: 166 --TAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTP 223
Query: 556 QPVRRSLPAPKT 567
P S P T
Sbjct: 224 APPSSSAPPETT 235
>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 45.8 bits (107), Expect = 1e-04
Identities = 51/229 (22%), Positives = 86/229 (37%), Gaps = 23/229 (10%)
Query: 341 RFSPSPRNSPR-PSPKQSPRNSPRSRSPARGIEYSRVSPQPMISRLQQPRLSLQGHPTDL 399
+ PSP N P+ P+P Q P++ ++ S V+P +++ Q P ++ T +
Sbjct: 73 KLPPSPNNPPKFPNPHQPPKHPDKNSSV--------VNPT-LVATTQIPSVTFPSASTKI 123
Query: 400 QTSNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQPQASAIPSPGK 459
T + N L ++ +S N S ++ + N P ++ P+P
Sbjct: 124 TT--LPNVTFLPQNATTISSRENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPS 181
Query: 460 FRSP-----AAPSPLALRQPVKAFSNHGSGSPGSQEITQLTQTTSSPGPPMVQSTVSANP 514
+P A P+P A Q + S +P T ++P PP +
Sbjct: 182 SSAPPETTAAPPTPSATTQAPPS-----SSAPPETTAAPPTPPATTPAPPSSSAPPETTA 236
Query: 515 PSNINSATLTRPAGTTAMRSGLPRPSAPSAGGIPVPRSKLAQPVRRSLP 563
SAT P ++A P PSA + P S A P + P
Sbjct: 237 APPTPSATTPAPLSSSAPPETTAVPPTPSATTLD-PSSASAPPETTAAP 284
Score = 31.2 bits (69), Expect = 2.7
Identities = 30/132 (22%), Positives = 50/132 (37%), Gaps = 8/132 (6%)
Query: 438 QVPNGGIPRMQPQASAIPSPGKFRSPAAPSPLALRQPVKAFSNHGSGSPGSQEITQLTQT 497
Q+P+ P + + +P+ P + ++ R+ V S+ + +P + Q T
Sbjct: 110 QIPSVTFPSASTKITTLPNVTFL--PQNATTISSRENVNTSSSVATLAPVNSPAPQDT-- 165
Query: 498 TSSPGPPMVQSTVSANPPSNINSATLTRPAGTTAMRSGLPRPSAP--SAGGIPVPRSKLA 555
+ PP +T A P S+ T P +A P SAP + P P +
Sbjct: 166 --TAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTP 223
Query: 556 QPVRRSLPAPKT 567
P S P T
Sbjct: 224 APPSSSAPPETT 235
>gi|222418645 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 45.8 bits (107), Expect = 1e-04
Identities = 51/229 (22%), Positives = 86/229 (37%), Gaps = 23/229 (10%)
Query: 341 RFSPSPRNSPR-PSPKQSPRNSPRSRSPARGIEYSRVSPQPMISRLQQPRLSLQGHPTDL 399
+ PSP N P+ P+P Q P++ ++ S V+P +++ Q P ++ T +
Sbjct: 73 KLPPSPNNPPKFPNPHQPPKHPDKNSSV--------VNPT-LVATTQIPSVTFPSASTKI 123
Query: 400 QTSNVKNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPRMQPQASAIPSPGK 459
T + N L ++ +S N S ++ + N P ++ P+P
Sbjct: 124 TT--LPNVTFLPQNATTISSRENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPS 181
Query: 460 FRSP-----AAPSPLALRQPVKAFSNHGSGSPGSQEITQLTQTTSSPGPPMVQSTVSANP 514
+P A P+P A Q + S +P T ++P PP +
Sbjct: 182 SSAPPETTAAPPTPSATTQAPPS-----SSAPPETTAAPPTPPATTPAPPSSSAPPETTA 236
Query: 515 PSNINSATLTRPAGTTAMRSGLPRPSAPSAGGIPVPRSKLAQPVRRSLP 563
SAT P ++A P PSA + P S A P + P
Sbjct: 237 APPTPSATTPAPLSSSAPPETTAVPPTPSATTLD-PSSASAPPETTAAP 284
Score = 31.2 bits (69), Expect = 2.7
Identities = 30/132 (22%), Positives = 50/132 (37%), Gaps = 8/132 (6%)
Query: 438 QVPNGGIPRMQPQASAIPSPGKFRSPAAPSPLALRQPVKAFSNHGSGSPGSQEITQLTQT 497
Q+P+ P + + +P+ P + ++ R+ V S+ + +P + Q T
Sbjct: 110 QIPSVTFPSASTKITTLPNVTFL--PQNATTISSRENVNTSSSVATLAPVNSPAPQDT-- 165
Query: 498 TSSPGPPMVQSTVSANPPSNINSATLTRPAGTTAMRSGLPRPSAP--SAGGIPVPRSKLA 555
+ PP +T A P S+ T P +A P SAP + P P +
Sbjct: 166 --TAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPETTAAPPTPPATTP 223
Query: 556 QPVRRSLPAPKT 567
P S P T
Sbjct: 224 APPSSSAPPETT 235
>gi|122937492 SET domain containing 5 [Homo sapiens]
Length = 1442
Score = 45.8 bits (107), Expect = 1e-04
Identities = 73/310 (23%), Positives = 113/310 (36%), Gaps = 32/310 (10%)
Query: 290 RQEYAATTSRRSSGSSCNSTRRGTFSDQELDAQSLDDEDDNMHHAVYPAVNRFSPSPRNS 349
R++ A S G S S + + Q S + D H V + R SP
Sbjct: 1074 RKQEAKENSAGGGGDSAQSKSKSAGAGQG----SSNSVSDTGAHGVQGSSARTPSSPHKK 1129
Query: 350 PRPSPKQSPRNSPRSRSPARGIEYSRVSPQPMIS----------RLQQP----------- 388
PS S S +RG S PQ IS RL++
Sbjct: 1130 FSPSHSSMSHLEAVSPSDSRGTSSSHCRPQENISSRWMVPTSVERLREGGSIPKVLRSSV 1189
Query: 389 RLSLQGHPTDLQTSNV--KNEEKLRRSLPNLSRTSNTQVDSVKSSRSDSNFQVPNGGIPR 446
R++ +G P+ SN+ K+ + P ++ ++ +V S S ++Q+ PR
Sbjct: 1190 RVAQKGEPSPTWESNITEKDSDPADGEGPETLSSALSKGATVYSP-SRYSYQLLQCDSPR 1248
Query: 447 MQPQASAIPSPGKFRSPAAPSPLALRQPVKAFSNHGSGSPGSQEITQLTQTTSSPGPPMV 506
+ Q+ S FR SP A S GS E + + + SSP P+
Sbjct: 1249 TESQSLLQQSSSPFRGHPTQSP-GYSYRTTALRPGNPPSHGSSESSLSSTSYSSPAHPV- 1306
Query: 507 QSTVSANPPSNINSATLTRPAGTTAMRSGLPRPSAPSAGGIPVPRSKLAQPVRRSLPAPK 566
ST S P + ++P + S LPR S PS+ P + P S+
Sbjct: 1307 -STDSLAPFTGTPGYFSSQPHSGNSTGSNLPRRSCPSSAASPTLQGPSDSPTSDSVSQSS 1365
Query: 567 TYGSMKDDSW 576
T G++ S+
Sbjct: 1366 T-GTLSSTSF 1374
>gi|73858559 proline/serine-rich coiled-coil 1 isoform c [Homo
sapiens]
Length = 363
Score = 45.4 bits (106), Expect = 1e-04
Identities = 69/239 (28%), Positives = 92/239 (38%), Gaps = 49/239 (20%)
Query: 366 SPARGIEYSRVSPQPMISRLQQPRLSLQGHPTDLQTSNVKNEEKLRRSLPNLSRT----- 420
S G+ RV P P ++ L+ P V + L RS P+ S
Sbjct: 98 SAGEGLGPRRVKPSP-----RRETFVLKDSPVRDLLPTVNS---LTRSTPSPSSLTPRLR 149
Query: 421 SNTQVDSVKSSRSDSNFQVPNGGIPRMQPQASAIPSPGKFRSPAAPSPLALRQPVKAFSN 480
SN + SV++ R+ S + N + R P + P+ +SPA+ SPL P
Sbjct: 150 SNDRKGSVRALRATSGKRPSN--MKRESPTCNLFPAS---KSPAS-SPLTRSTPPVRGRA 203
Query: 481 HGSGSPGSQEITQLTQTT-----------------SSPGPPMVQSTVSANPPSNINSATL 523
SG + E T+ + S PGPP +V A PS NS L
Sbjct: 204 GPSGRAAASEETRAAKLRVSGSGEFVGLTLKFLHPSPPGPPTPIRSVLAPQPSTSNSQRL 263
Query: 524 TRPAGTTAMRSG-LPRPSA--PSAGGIP-----VPRSKLAQP-----VRRSLPAPKTYG 569
RP G A S LP PSA A +P VP + A P R+ LP P T G
Sbjct: 264 PRPQGAAAKSSSQLPIPSAIPRPASRMPLTSRSVPPGRGALPPDSLSTRKGLPRPSTAG 322
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.307 0.125 0.354
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,187,694
Number of Sequences: 37866
Number of extensions: 1672771
Number of successful extensions: 13447
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 844
Number of HSP's that attempted gapping in prelim test: 11013
Number of HSP's gapped (non-prelim): 3106
length of query: 581
length of database: 18,247,518
effective HSP length: 108
effective length of query: 473
effective length of database: 14,157,990
effective search space: 6696729270
effective search space used: 6696729270
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.