Guide to the Human Genome
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Name: C1QTNF4 Sequence: fasta or formatted (329aa) NCBI GI: 148233912
Description:

C1q and tumor necrosis factor related protein 4

Referenced in:

Complement

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.7         45           3
 C cysteine            0.9          3           1
 D aspartate           6.4         21           2
 E glutamate           3.0         10           1
 F phenylalanine       5.8         19           2
 G glycine            10.3         34           2
 H histidine           1.8          6           1
 I isoleucine          1.2          4           1
 K lysine              2.4          8           1
 L leucine            10.3         34           3
 M methionine          2.4          8           1
 N asparagine          1.5          5           1
 P proline             7.9         26           2
 Q glutamine           3.0         10           1
 R arginine            7.6         25           3
 S serine              7.3         24           2
 T threonine           4.3         14           2
 V valine              5.5         18           1
 W tryptophan          0.9          3           1
 Y tyrosine            3.6         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   C1q and tumor necrosis factor related protein 4 [Ho... 
C1QTNF8               0.104   C1q and tumor necrosis factor related protein 8 [Ho...
CAPRIN2               0.098   C1q domain containing 1 isoform 1 
CAPRIN2               0.098   C1q domain containing 1 isoform 3 
CAPRIN2               0.098   C1q domain containing 1 isoform 2 
C1QTNF5               0.089   C1q and tumor necrosis factor related protein 5 prec...
C1QTNF2               0.084   C1q and tumor necrosis factor related protein 2 [Hom...
C1QTNF1               0.082   C1q and tumor necrosis factor related protein 1 isof...
C1QTNF1               0.082   C1q and tumor necrosis factor related protein 1 [Hom...
C1QTNF1               0.082   C1q and tumor necrosis factor related protein 1 isof...
C1QTNF6               0.078   C1q and tumor necrosis factor related protein 6 [Hom...
C1QTNF6               0.078   C1q and tumor necrosis factor related protein 6 [Hom...
ADIPOQ                0.078   adiponectin precursor 
C1QL4                 0.078   complement component 1, q subcomponent-like 4 
C1QL1                 0.070   complement component 1, q subcomponent-like 1 
C1QTNF7               0.070   C1q and tumor necrosis factor related protein 7 isof...
C1QTNF7               0.070   C1q and tumor necrosis factor related protein 7 iso...
C1QTNF7               0.070   C1q and tumor necrosis factor related protein 7 iso...
C1QB                  0.067   complement component 1, q subcomponent, B chain prec...
C1QL3                 0.067   complement component 1, q subcomponent-like 3 
C1QL2                 0.064   complement component 1, q subcomponent-like 2 [Homo...
C1QC                  0.061   complement component 1, q subcomponent, C chain prec...
C1QC                  0.061   complement component 1, q subcomponent, C chain pre...
C1QTNF3               0.061   C1q and tumor necrosis factor related protein 3 isof...
C1QTNF3               0.061   C1q and tumor necrosis factor related protein 3 isof...
CBLN2                 0.061   cerebellin 2 precursor 
CBLN3                 0.058   cerebellin 3 precursor 
C1QA                  0.054   complement component 1, q subcomponent, A chain precu...
COL10A1               0.054   type X collagen alpha 1 precursor 
CBLN1                 0.053   cerebellin 1 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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