NOP58 36140

Name: NOP58	Sequence: fasta or formatted (529aa)		NCBI GI: 7706254
Description: NOP58 ribonucleoprotein homolog		Referenced in: Nucleus and Nucleolus Small RNAs in RNA Processing
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.1 48 3 C cysteine 1.7 9 1 D aspartate 4.0 21 2 E glutamate 11.5 61 6 F phenylalanine 1.9 10 1 G glycine 4.9 26 2 H histidine 2.3 12 1 I isoleucine 5.9 31 2 K lysine 13.6 72 8 L leucine 9.8 52 2 M methionine 2.6 14 2 N asparagine 2.8 15 2 P proline 2.8 15 1 Q glutamine 2.3 12 1 R arginine 4.5 24 2 S serine 6.2 33 3 T threonine 4.5 24 1 V valine 6.2 33 2 W tryptophan 0.6 3 1 Y tyrosine 2.6 14 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 NOP58 ribonucleoprotein homolog NOP56 0.318 nucleolar protein 5A PRPF31 0.103 pre-mRNA processing factor 31 homolog LOC402360 0.052 PREDICTED: similar to hCG1742476 LOC402360 0.052 PREDICTED: similar to hCG1742476 LOC402360 0.052 PREDICTED: hypothetical protein LOC402360 LOC100294088 0.028 PREDICTED: hypothetical protein, partial CHAF1A 0.028 chromatin assembly factor 1, subunit A (p150) WDR87 0.027 NYD-SP11 protein MAP1B 0.026 microtubule-associated protein 1B USP42 0.025 ubiquitin specific peptidase 42 ANKRD11 0.024 ankyrin repeat domain 11 EIF5B 0.024 eukaryotic translation initiation factor 5B NEFH 0.023 neurofilament, heavy polypeptide 200kDa LOC100133599 0.022 PREDICTED: hypothetical protein CALD1 0.021 caldesmon 1 isoform 1 LOC100133698 0.021 PREDICTED: hypothetical protein TOP1 0.020 DNA topoisomerase I PTMS 0.020 parathymosin TRDN 0.020 triadin DKC1 0.020 dyskerin isoform 1 DKC1 0.020 dyskerin isoform 2 LOC100133599 0.020 PREDICTED: hypothetical protein CLIP1 0.020 restin isoform a BOD1L 0.019 biorientation of chromosomes in cell division 1-like... MAP1A 0.019 microtubule-associated protein 1A TCOF1 0.019 Treacher Collins-Franceschetti syndrome 1 isoform f... TCOF1 0.019 Treacher Collins-Franceschetti syndrome 1 isoform e... TCOF1 0.019 Treacher Collins-Franceschetti syndrome 1 isoform d... TCOF1 0.019 Treacher Collins-Franceschetti syndrome 1 isoform b ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.