USP42 36318

Name: USP42	Sequence: fasta or formatted (1316aa)		NCBI GI: 79750944
Description: ubiquitin specific peptidase 42		Referenced in: Ubiquitin and Related Protein Modifications
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.2 108 3 C cysteine 2.0 26 1 D aspartate 5.9 78 2 E glutamate 6.7 88 2 F phenylalanine 2.1 28 1 G glycine 7.1 94 2 H histidine 4.7 62 3 I isoleucine 2.5 33 1 K lysine 6.7 88 8 L leucine 6.4 84 2 M methionine 1.7 23 2 N asparagine 3.9 51 1 P proline 9.1 120 3 Q glutamine 3.8 50 2 R arginine 7.1 94 4 S serine 10.9 143 4 T threonine 3.7 49 2 V valine 4.6 61 2 W tryptophan 0.7 9 1 Y tyrosine 2.1 27 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ubiquitin specific peptidase 42 USP36 0.191 ubiquitin specific peptidase 36 LOC728419 0.155 PREDICTED: similar to deubiquitinating enzyme 1 [Ho... LOC728405 0.155 PREDICTED: similar to deubiquitinating enzyme 1 [Ho... LOC728400 0.155 PREDICTED: similar to deubiquitinating enzyme 1 [Ho... LOC728393 0.155 PREDICTED: similar to deubiquitinating enzyme 1 [Ho... LOC728379 0.155 PREDICTED: similar to deubiquitinating enzyme 1 [Ho... LOC728373 0.155 PREDICTED: similar to deubiquitinating enzyme 1 [Ho... LOC728369 0.155 PREDICTED: similar to deubiquitinating enzyme 3 [Ho... LOC100287441 0.155 PREDICTED: hypothetical protein XP_002342478 USP17L5 0.155 PREDICTED: Ubiquitin carboxyl-terminal hydrolase 17... LOC728379 0.154 PREDICTED: similar to deubiquitinating enzyme DUB1 ... LOC728373 0.154 PREDICTED: similar to deubiquitinating enzyme DUB1 ... LOC100287178 0.154 PREDICTED: hypothetical protein XP_002342472 LOC100287513 0.154 PREDICTED: hypothetical protein XP_002342480 LOC100287404 0.154 PREDICTED: hypothetical protein XP_002342477 LOC100287364 0.154 PREDICTED: hypothetical protein XP_002342476 LOC100287327 0.154 PREDICTED: hypothetical protein XP_002342475 LOC100287478 0.154 PREDICTED: hypothetical protein XP_002342479 LOC100287205 0.153 PREDICTED: hypothetical protein XP_002342473 LOC100288520 0.152 PREDICTED: hypothetical protein XP_002342486 USP17 0.152 ubiquitin specific peptidase 17 LOC100287238 0.152 PREDICTED: hypothetical protein XP_002342474 LOC100287144 0.150 PREDICTED: hypothetical protein XP_002342471 USP17L8 0.148 PREDICTED: Inactive ubiquitin carboxyl-terminal hyd... DUB3 0.148 deubiquitinating enzyme 3 USP17L3 0.146 PREDICTED: Ubiquitin carboxyl-terminal hydrolase 17... USP17L4 0.145 PREDICTED: Inactive ubiquitin carboxyl-terminal hyd... USP17L7 0.141 PREDICTED: Inactive ubiquitin carboxyl-terminal hydr... USP17L7 0.141 PREDICTED: Inactive ubiquitin carboxyl-terminal hyd... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.