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Search of human proteins with 5453898
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5453898 protein (peptidyl-prolyl cis/trans isomerase)
NIMA-interacting 1 [Homo sapiens]
(163 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5453898 protein (peptidyl-prolyl cis/trans isomerase) NIMA-in... 332 7e-92
gi|38679892 protein (peptidyl-prolyl cis/trans isomerase) NIMA-i... 54 6e-08
gi|12232397 SMAD specific E3 ubiquitin protein ligase 2 [Homo sa... 48 3e-06
gi|40806207 WW domain containing E3 ubiquitin protein ligase 2 i... 47 7e-06
gi|27477109 itchy homolog E3 ubiquitin protein ligase [Homo sapi... 46 1e-05
gi|55741473 HECT, C2 and WW domain containing E3 ubiquitin prote... 45 2e-05
gi|94536811 NEDD4-like ubiquitin-protein ligase 1 [Homo sapiens] 45 3e-05
gi|13654239 WW domain containing E3 ubiquitin protein ligase 1 [... 45 4e-05
gi|7706523 WW domain-containing oxidoreductase isoform 1 [Homo s... 44 5e-05
gi|18860884 WW domain-containing oxidoreductase isoform 2 [Homo ... 44 5e-05
gi|18034767 phosphorylated CTD interacting factor 1 [Homo sapiens] 43 1e-04
gi|222352183 neural precursor cell expressed, developmentally do... 43 1e-04
gi|21361472 neural precursor cell expressed, developmentally dow... 43 1e-04
gi|222352094 neural precursor cell expressed, developmentally do... 43 1e-04
gi|222352092 neural precursor cell expressed, developmentally do... 43 1e-04
gi|222352090 neural precursor cell expressed, developmentally do... 43 1e-04
gi|222352088 neural precursor cell expressed, developmentally do... 43 1e-04
gi|222352086 neural precursor cell expressed, developmentally do... 43 1e-04
gi|222352084 neural precursor cell expressed, developmentally do... 43 1e-04
gi|222352082 neural precursor cell expressed, developmentally do... 43 1e-04
gi|195546919 growth arrest-specific 7 isoform d [Homo sapiens] 43 1e-04
gi|41406080 growth arrest-specific 7 isoform c [Homo sapiens] 43 1e-04
gi|41406078 growth arrest-specific 7 isoform b [Homo sapiens] 43 1e-04
gi|114520609 neural precursor cell expressed, developmentally do... 42 3e-04
gi|114520607 neural precursor cell expressed, developmentally do... 42 3e-04
gi|40806209 WW domain containing E3 ubiquitin protein ligase 2 i... 40 9e-04
gi|156546890 WW and C2 domain containing 2 [Homo sapiens] 38 0.003
gi|13346498 WW domain containing transcription regulator 1 [Homo... 37 0.006
gi|40806211 WW domain containing E3 ubiquitin protein ligase 2 i... 36 0.017
gi|5174751 Yes-associated protein 1, 65kDa isoform 2 [Homo sapiens] 35 0.022
>gi|5453898 protein (peptidyl-prolyl cis/trans isomerase)
NIMA-interacting 1 [Homo sapiens]
Length = 163
Score = 332 bits (852), Expect = 7e-92
Identities = 163/163 (100%), Positives = 163/163 (100%)
Query: 1 MADEEKLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHL 60
MADEEKLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHL
Sbjct: 1 MADEEKLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHL 60
Query: 61 LVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARG 120
LVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARG
Sbjct: 61 LVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARG 120
Query: 121 DLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE 163
DLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE
Sbjct: 121 DLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE 163
>gi|38679892 protein (peptidyl-prolyl cis/trans isomerase)
NIMA-interacting, 4 (parvulin) [Homo sapiens]
Length = 156
Score = 53.9 bits (128), Expect = 6e-08
Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Query: 93 IQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFT 152
++K+KSG F +A+Q+S+ A+ GDLG +RG M PF++A+FAL M PVFT
Sbjct: 80 MEKLKSGMR-FNEVAAQYSE-DKARQGGDLGWMTRGSMVGPFQEAAFALPVSGMDKPVFT 137
Query: 153 DS------GIHIIL 160
D G HII+
Sbjct: 138 DPPVKTKFGYHIIM 151
>gi|12232397 SMAD specific E3 ubiquitin protein ligase 2 [Homo
sapiens]
Length = 748
Score = 48.1 bits (113), Expect = 3e-06
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 4 EEKLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQ 49
+ LP GWE+R + +SGR+ Y NHIT +QWERP+ +S G+
Sbjct: 156 DNDLPDGWEERRT-ASGRIQYLNHITRTTQWERPTRPASEYSSPGR 200
Score = 32.7 bits (73), Expect = 0.14
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
LPPGWE R + ++GRVY+ +H +Q+ P
Sbjct: 299 LPPGWEIR-NTATGRVYFVDHNNRTTQFTDP 328
Score = 27.3 bits (59), Expect = 6.0
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
LP G+E+R ++ G+VY+ + T S W P
Sbjct: 253 LPEGYEQRTTQQ-GQVYFLHTQTGVSTWHDP 282
>gi|40806207 WW domain containing E3 ubiquitin protein ligase 2
isoform 1 [Homo sapiens]
Length = 870
Score = 47.0 bits (110), Expect = 7e-06
Identities = 20/31 (64%), Positives = 23/31 (74%), Gaps = 2/31 (6%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
LPPGWEKR + +GRVYY NH T +QWE P
Sbjct: 407 LPPGWEKR--QDNGRVYYVNHNTRTTQWEDP 435
Score = 42.7 bits (99), Expect = 1e-04
Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 4 EEKLPPGWEKRMSRSSGRVYYFNHITNASQWERPS 38
E LPPGWEKR GR YY +H T + W+RP+
Sbjct: 329 ERPLPPGWEKRTD-PRGRFYYVDHNTRTTTWQRPT 362
Score = 40.0 bits (92), Expect = 9e-04
Identities = 17/33 (51%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 5 EKLPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
+ LP GWE+R +GRVYY +H T + WERP
Sbjct: 300 DALPAGWEQR-ELPNGRVYYVDHNTKTTTWERP 331
Score = 35.8 bits (81), Expect = 0.017
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 1 MADEEKLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNG 48
M E LPPGWE + + S G Y+ +H T + ++ P SG K G
Sbjct: 440 MIQEPALPPGWEMKYT-SEGVRYFVDHNTRTTTFKDPRPGFESGTKQG 486
>gi|27477109 itchy homolog E3 ubiquitin protein ligase [Homo
sapiens]
Length = 862
Score = 46.2 bits (108), Expect = 1e-05
Identities = 20/31 (64%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
LPPGWEKR S+GRVY+ NH T +QWE P
Sbjct: 399 LPPGWEKRTD-SNGRVYFVNHNTRITQWEDP 428
Score = 45.8 bits (107), Expect = 2e-05
Identities = 17/34 (50%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 5 EKLPPGWEKRMSRSSGRVYYFNHITNASQWERPS 38
E LPPGWE+R+ + GR+YY +H T + W+RP+
Sbjct: 317 EPLPPGWERRVD-NMGRIYYVDHFTRTTTWQRPT 349
Score = 42.4 bits (98), Expect = 2e-04
Identities = 16/31 (51%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
LPPGWE+R+ + GRVYY +H+ + W+RP
Sbjct: 287 LPPGWEQRVDQH-GRVYYVDHVEKRTTWDRP 316
>gi|55741473 HECT, C2 and WW domain containing E3 ubiquitin protein
ligase 2 [Homo sapiens]
Length = 1572
Score = 45.4 bits (106), Expect = 2e-05
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 18/109 (16%)
Query: 4 EEKLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHLLVK 63
+E LPP WE R+ S GR++Y +H+ + W+RP+ + P ++ S+ + +
Sbjct: 806 DEALPPNWEARID-SHGRIFYVDHVNRTTTWQRPTAPPA---------PQVLQRSNSIQQ 855
Query: 64 HSQ-SRRPSSWRQEKITRTKEEALELINGYIQKIKSGEE-DFESLASQF 110
Q +RR S R+ EE I+G +GEE DF ++ F
Sbjct: 856 MEQLNRRYQSIRRTMTNERPEENTNAIDG------AGEEADFHQASADF 898
>gi|94536811 NEDD4-like ubiquitin-protein ligase 1 [Homo sapiens]
Length = 1606
Score = 45.1 bits (105), Expect = 3e-05
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 4 EEKLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQG 50
+E LPP WE R+ S GRV+Y +H+ + W+RP+ ++ G G
Sbjct: 828 DEPLPPNWEARID-SHGRVFYVDHVNRTTTWQRPTAAATPDGMRRSG 873
>gi|13654239 WW domain containing E3 ubiquitin protein ligase 1
[Homo sapiens]
Length = 922
Score = 44.7 bits (104), Expect = 4e-05
Identities = 19/31 (61%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
LPPGWEKR+ S+ RVY+ NH T +QWE P
Sbjct: 458 LPPGWEKRVD-STDRVYFVNHNTKTTQWEDP 487
Score = 40.8 bits (94), Expect = 5e-04
Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 2 ADEEKLPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
A+ E LP GWE+R GR YY +H T + WERP
Sbjct: 346 ANTETLPSGWEQRKD-PHGRTYYVDHNTRTTTWERP 380
Score = 40.8 bits (94), Expect = 5e-04
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 5 EKLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNS 41
+ LPPGWE+R+ RVYY +H T + W+RP+ S
Sbjct: 381 QPLPPGWERRVD-DRRRVYYVDHNTRTTTWQRPTMES 416
Score = 35.4 bits (80), Expect = 0.022
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 1 MADEEKLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNG 48
+ +EE LP GWE R +R R Y+ +H T + ++ P SS K G
Sbjct: 492 LQNEEPLPEGWEIRYTREGVR-YFVDHNTRTTTFKDPRNGKSSVTKGG 538
>gi|7706523 WW domain-containing oxidoreductase isoform 1 [Homo
sapiens]
Length = 414
Score = 44.3 bits (103), Expect = 5e-05
Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 4 EEKLPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
E++LPPGWE+R ++ G VYY NH +QWE P
Sbjct: 15 EDELPPGWEERTTKD-GWVYYANHTEEKTQWEHP 47
>gi|18860884 WW domain-containing oxidoreductase isoform 2 [Homo
sapiens]
Length = 189
Score = 44.3 bits (103), Expect = 5e-05
Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Query: 4 EEKLPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
E++LPPGWE+R ++ G VYY NH +QWE P
Sbjct: 15 EDELPPGWEERTTKD-GWVYYANHTEEKTQWEHP 47
>gi|18034767 phosphorylated CTD interacting factor 1 [Homo
sapiens]
Length = 704
Score = 43.1 bits (100), Expect = 1e-04
Identities = 19/34 (55%), Positives = 20/34 (58%)
Query: 4 EEKLPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
EE + GWEK SR R YYFN TN S WE P
Sbjct: 42 EELVHAGWEKCWSRRENRPYYFNRFTNQSLWEMP 75
>gi|222352183 neural precursor cell expressed, developmentally
down-regulated 4-like isoform 2 [Homo sapiens]
Length = 854
Score = 42.7 bits (99), Expect = 1e-04
Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERPS 38
LPPGWE+++ + GR YY NH +QW RPS
Sbjct: 74 LPPGWEEKVD-NLGRTYYVNHNNRTTQWHRPS 104
Score = 42.7 bits (99), Expect = 1e-04
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHLLVKHSQ 66
LP GWE+R + GR YY NH + W RP + G +G + +HL+ Q
Sbjct: 266 LPSGWEERKD-AKGRTYYVNHNNRTTTWTRPIMQLAEDGASGSATNSN---NHLI--EPQ 319
Query: 67 SRRPSSWRQEKIT 79
RRP S +T
Sbjct: 320 IRRPRSLSSPTVT 332
Score = 38.1 bits (87), Expect = 0.003
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
LPPGWE+R+ GR +Y +H + +QWE P
Sbjct: 429 LPPGWEERI-HLDGRTFYIDHNSKITQWEDP 458
Score = 35.8 bits (81), Expect = 0.017
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
LPPGWE R++ +GR ++ +H T + WE P
Sbjct: 378 LPPGWEMRIA-PNGRPFFIDHNTKTTTWEDP 407
>gi|21361472 neural precursor cell expressed, developmentally
down-regulated 4-like isoform 3 [Homo sapiens]
Length = 955
Score = 42.7 bits (99), Expect = 1e-04
Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERPS 38
LPPGWE+++ + GR YY NH +QW RPS
Sbjct: 195 LPPGWEEKVD-NLGRTYYVNHNNRTTQWHRPS 225
Score = 42.7 bits (99), Expect = 1e-04
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHLLVKHSQ 66
LP GWE+R + GR YY NH + W RP + G +G + +HL+ Q
Sbjct: 367 LPSGWEERKD-AKGRTYYVNHNNRTTTWTRPIMQLAEDGASGSATNSN---NHLI--EPQ 420
Query: 67 SRRPSSWRQEKIT 79
RRP S +T
Sbjct: 421 IRRPRSLSSPTVT 433
Score = 38.1 bits (87), Expect = 0.003
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
LPPGWE+R+ GR +Y +H + +QWE P
Sbjct: 530 LPPGWEERI-HLDGRTFYIDHNSKITQWEDP 559
Score = 35.8 bits (81), Expect = 0.017
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
LPPGWE R++ +GR ++ +H T + WE P
Sbjct: 479 LPPGWEMRIA-PNGRPFFIDHNTKTTTWEDP 508
>gi|222352094 neural precursor cell expressed, developmentally
down-regulated 4-like isoform 6 [Homo sapiens]
Length = 834
Score = 42.7 bits (99), Expect = 1e-04
Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERPS 38
LPPGWE+++ + GR YY NH +QW RPS
Sbjct: 74 LPPGWEEKVD-NLGRTYYVNHNNRTTQWHRPS 104
Score = 42.7 bits (99), Expect = 1e-04
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHLLVKHSQ 66
LP GWE+R + GR YY NH + W RP + G +G + +HL+ Q
Sbjct: 246 LPSGWEERKD-AKGRTYYVNHNNRTTTWTRPIMQLAEDGASGSATNSN---NHLI--EPQ 299
Query: 67 SRRPSSWRQEKIT 79
RRP S +T
Sbjct: 300 IRRPRSLSSPTVT 312
Score = 38.1 bits (87), Expect = 0.003
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
LPPGWE+R+ GR +Y +H + +QWE P
Sbjct: 409 LPPGWEERI-HLDGRTFYIDHNSKITQWEDP 438
Score = 35.8 bits (81), Expect = 0.017
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
LPPGWE R++ +GR ++ +H T + WE P
Sbjct: 358 LPPGWEMRIA-PNGRPFFIDHNTKTTTWEDP 387
>gi|222352092 neural precursor cell expressed, developmentally
down-regulated 4-like isoform 6 [Homo sapiens]
Length = 834
Score = 42.7 bits (99), Expect = 1e-04
Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERPS 38
LPPGWE+++ + GR YY NH +QW RPS
Sbjct: 74 LPPGWEEKVD-NLGRTYYVNHNNRTTQWHRPS 104
Score = 42.7 bits (99), Expect = 1e-04
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHLLVKHSQ 66
LP GWE+R + GR YY NH + W RP + G +G + +HL+ Q
Sbjct: 246 LPSGWEERKD-AKGRTYYVNHNNRTTTWTRPIMQLAEDGASGSATNSN---NHLI--EPQ 299
Query: 67 SRRPSSWRQEKIT 79
RRP S +T
Sbjct: 300 IRRPRSLSSPTVT 312
Score = 38.1 bits (87), Expect = 0.003
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
LPPGWE+R+ GR +Y +H + +QWE P
Sbjct: 409 LPPGWEERI-HLDGRTFYIDHNSKITQWEDP 438
Score = 35.8 bits (81), Expect = 0.017
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
LPPGWE R++ +GR ++ +H T + WE P
Sbjct: 358 LPPGWEMRIA-PNGRPFFIDHNTKTTTWEDP 387
>gi|222352090 neural precursor cell expressed, developmentally
down-regulated 4-like isoform 5 [Homo sapiens]
Length = 947
Score = 42.7 bits (99), Expect = 1e-04
Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERPS 38
LPPGWE+++ + GR YY NH +QW RPS
Sbjct: 187 LPPGWEEKVD-NLGRTYYVNHNNRTTQWHRPS 217
Score = 42.7 bits (99), Expect = 1e-04
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHLLVKHSQ 66
LP GWE+R + GR YY NH + W RP + G +G + +HL+ Q
Sbjct: 359 LPSGWEERKD-AKGRTYYVNHNNRTTTWTRPIMQLAEDGASGSATNSN---NHLI--EPQ 412
Query: 67 SRRPSSWRQEKIT 79
RRP S +T
Sbjct: 413 IRRPRSLSSPTVT 425
Score = 38.1 bits (87), Expect = 0.003
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
LPPGWE+R+ GR +Y +H + +QWE P
Sbjct: 522 LPPGWEERI-HLDGRTFYIDHNSKITQWEDP 551
Score = 35.8 bits (81), Expect = 0.017
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
LPPGWE R++ +GR ++ +H T + WE P
Sbjct: 471 LPPGWEMRIA-PNGRPFFIDHNTKTTTWEDP 500
>gi|222352088 neural precursor cell expressed, developmentally
down-regulated 4-like isoform 4 [Homo sapiens]
Length = 967
Score = 42.7 bits (99), Expect = 1e-04
Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERPS 38
LPPGWE+++ + GR YY NH +QW RPS
Sbjct: 187 LPPGWEEKVD-NLGRTYYVNHNNRTTQWHRPS 217
Score = 42.7 bits (99), Expect = 1e-04
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHLLVKHSQ 66
LP GWE+R + GR YY NH + W RP + G +G + +HL+ Q
Sbjct: 379 LPSGWEERKD-AKGRTYYVNHNNRTTTWTRPIMQLAEDGASGSATNSN---NHLI--EPQ 432
Query: 67 SRRPSSWRQEKIT 79
RRP S +T
Sbjct: 433 IRRPRSLSSPTVT 445
Score = 38.1 bits (87), Expect = 0.003
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
LPPGWE+R+ GR +Y +H + +QWE P
Sbjct: 542 LPPGWEERI-HLDGRTFYIDHNSKITQWEDP 571
Score = 35.8 bits (81), Expect = 0.017
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
LPPGWE R++ +GR ++ +H T + WE P
Sbjct: 491 LPPGWEMRIA-PNGRPFFIDHNTKTTTWEDP 520
>gi|222352086 neural precursor cell expressed, developmentally
down-regulated 4-like isoform 1 [Homo sapiens]
Length = 975
Score = 42.7 bits (99), Expect = 1e-04
Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERPS 38
LPPGWE+++ + GR YY NH +QW RPS
Sbjct: 195 LPPGWEEKVD-NLGRTYYVNHNNRTTQWHRPS 225
Score = 42.7 bits (99), Expect = 1e-04
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHLLVKHSQ 66
LP GWE+R + GR YY NH + W RP + G +G + +HL+ Q
Sbjct: 387 LPSGWEERKD-AKGRTYYVNHNNRTTTWTRPIMQLAEDGASGSATNSN---NHLI--EPQ 440
Query: 67 SRRPSSWRQEKIT 79
RRP S +T
Sbjct: 441 IRRPRSLSSPTVT 453
Score = 38.1 bits (87), Expect = 0.003
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
LPPGWE+R+ GR +Y +H + +QWE P
Sbjct: 550 LPPGWEERI-HLDGRTFYIDHNSKITQWEDP 579
Score = 35.8 bits (81), Expect = 0.017
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
LPPGWE R++ +GR ++ +H T + WE P
Sbjct: 499 LPPGWEMRIA-PNGRPFFIDHNTKTTTWEDP 528
>gi|222352084 neural precursor cell expressed, developmentally
down-regulated 4-like isoform 2 [Homo sapiens]
Length = 854
Score = 42.7 bits (99), Expect = 1e-04
Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERPS 38
LPPGWE+++ + GR YY NH +QW RPS
Sbjct: 74 LPPGWEEKVD-NLGRTYYVNHNNRTTQWHRPS 104
Score = 42.7 bits (99), Expect = 1e-04
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHLLVKHSQ 66
LP GWE+R + GR YY NH + W RP + G +G + +HL+ Q
Sbjct: 266 LPSGWEERKD-AKGRTYYVNHNNRTTTWTRPIMQLAEDGASGSATNSN---NHLI--EPQ 319
Query: 67 SRRPSSWRQEKIT 79
RRP S +T
Sbjct: 320 IRRPRSLSSPTVT 332
Score = 38.1 bits (87), Expect = 0.003
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
LPPGWE+R+ GR +Y +H + +QWE P
Sbjct: 429 LPPGWEERI-HLDGRTFYIDHNSKITQWEDP 458
Score = 35.8 bits (81), Expect = 0.017
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
LPPGWE R++ +GR ++ +H T + WE P
Sbjct: 378 LPPGWEMRIA-PNGRPFFIDHNTKTTTWEDP 407
>gi|222352082 neural precursor cell expressed, developmentally
down-regulated 4-like isoform 2 [Homo sapiens]
Length = 854
Score = 42.7 bits (99), Expect = 1e-04
Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERPS 38
LPPGWE+++ + GR YY NH +QW RPS
Sbjct: 74 LPPGWEEKVD-NLGRTYYVNHNNRTTQWHRPS 104
Score = 42.7 bits (99), Expect = 1e-04
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHLLVKHSQ 66
LP GWE+R + GR YY NH + W RP + G +G + +HL+ Q
Sbjct: 266 LPSGWEERKD-AKGRTYYVNHNNRTTTWTRPIMQLAEDGASGSATNSN---NHLI--EPQ 319
Query: 67 SRRPSSWRQEKIT 79
RRP S +T
Sbjct: 320 IRRPRSLSSPTVT 332
Score = 38.1 bits (87), Expect = 0.003
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
LPPGWE+R+ GR +Y +H + +QWE P
Sbjct: 429 LPPGWEERI-HLDGRTFYIDHNSKITQWEDP 458
Score = 35.8 bits (81), Expect = 0.017
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
LPPGWE R++ +GR ++ +H T + WE P
Sbjct: 378 LPPGWEMRIA-PNGRPFFIDHNTKTTTWEDP 407
>gi|195546919 growth arrest-specific 7 isoform d [Homo sapiens]
Length = 412
Score = 42.7 bits (99), Expect = 1e-04
Identities = 24/56 (42%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERPS---GNSSSGGKNGQGEPARVRCSH 59
LPPGW+ +S GR YY N TN + WERPS G +S G + P V H
Sbjct: 15 LPPGWQSYLS-PQGRRYYVNTTTNETTWERPSSSPGIPASPGSHRSSLPPTVNGYH 69
>gi|41406080 growth arrest-specific 7 isoform c [Homo sapiens]
Length = 476
Score = 42.7 bits (99), Expect = 1e-04
Identities = 24/56 (42%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERPS---GNSSSGGKNGQGEPARVRCSH 59
LPPGW+ +S GR YY N TN + WERPS G +S G + P V H
Sbjct: 79 LPPGWQSYLS-PQGRRYYVNTTTNETTWERPSSSPGIPASPGSHRSSLPPTVNGYH 133
>gi|41406078 growth arrest-specific 7 isoform b [Homo sapiens]
Length = 416
Score = 42.7 bits (99), Expect = 1e-04
Identities = 24/56 (42%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERPS---GNSSSGGKNGQGEPARVRCSH 59
LPPGW+ +S GR YY N TN + WERPS G +S G + P V H
Sbjct: 19 LPPGWQSYLS-PQGRRYYVNTTTNETTWERPSSSPGIPASPGSHRSSLPPTVNGYH 73
>gi|114520609 neural precursor cell expressed, developmentally
down-regulated 4 isoform 1 [Homo sapiens]
Length = 900
Score = 41.6 bits (96), Expect = 3e-04
Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERPS 38
LPPGWE+R GR YY NH + +QW+RP+
Sbjct: 193 LPPGWEERQD-ILGRTYYVNHESRRTQWKRPT 223
Score = 41.6 bits (96), Expect = 3e-04
Identities = 16/31 (51%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
LPPGWE+R + + GR++Y NH +QWE P
Sbjct: 475 LPPGWEER-THTDGRIFYINHNIKRTQWEDP 504
Score = 35.0 bits (79), Expect = 0.029
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERPS 38
LPPGWE++ GR YY +H + + W +P+
Sbjct: 350 LPPGWEEKQDER-GRSYYVDHNSRTTTWTKPT 380
Score = 31.2 bits (69), Expect = 0.41
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
LP GWE R + +GR ++ +H T + WE P
Sbjct: 423 LPKGWEVRHA-PNGRPFFIDHNTKTTTWEDP 452
>gi|114520607 neural precursor cell expressed, developmentally
down-regulated 4 isoform 2 [Homo sapiens]
Length = 1247
Score = 41.6 bits (96), Expect = 3e-04
Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERPS 38
LPPGWE+R GR YY NH + +QW+RP+
Sbjct: 540 LPPGWEERQD-ILGRTYYVNHESRRTQWKRPT 570
Score = 41.6 bits (96), Expect = 3e-04
Identities = 16/31 (51%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
LPPGWE+R + + GR++Y NH +QWE P
Sbjct: 822 LPPGWEER-THTDGRIFYINHNIKRTQWEDP 851
Score = 35.0 bits (79), Expect = 0.029
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERPS 38
LPPGWE++ GR YY +H + + W +P+
Sbjct: 697 LPPGWEEKQDER-GRSYYVDHNSRTTTWTKPT 727
Score = 31.2 bits (69), Expect = 0.41
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
LP GWE R + +GR ++ +H T + WE P
Sbjct: 770 LPKGWEVRHA-PNGRPFFIDHNTKTTTWEDP 799
>gi|40806209 WW domain containing E3 ubiquitin protein ligase 2
isoform 3 [Homo sapiens]
Length = 335
Score = 40.0 bits (92), Expect = 9e-04
Identities = 17/33 (51%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 5 EKLPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
+ LP GWE+R +GRVYY +H T + WERP
Sbjct: 300 DALPAGWEQR-ELPNGRVYYVDHNTKTTTWERP 331
>gi|156546890 WW and C2 domain containing 2 [Homo sapiens]
Length = 1192
Score = 38.1 bits (87), Expect = 0.003
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 14/113 (12%)
Query: 5 EKLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHLLVKH 64
++LP GWE G VYY +HI +Q E P K +GE ++ +L V
Sbjct: 57 DELPWGWEAGFDPQIG-VYYIDHINKTTQIEDPR-------KQWRGEQEKMLKDYLSVAQ 108
Query: 65 SQSRRPSSWRQEKITRTKEEALEL-INGYIQKIKSGEEDFESLASQFSDCSSA 116
R Q+++ KE+ L L ++ Y++ + +E S S FS SS+
Sbjct: 109 DALR-----TQKELYHVKEQRLALALDEYVRLNDAYKEKSSSHTSLFSGSSSS 156
Score = 28.5 bits (62), Expect = 2.7
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
LP GWE+ G+V+Y +H T + W P
Sbjct: 12 LPRGWEEARDYD-GKVFYIDHNTRRTSWIDP 41
>gi|13346498 WW domain containing transcription regulator 1 [Homo
sapiens]
Length = 400
Score = 37.4 bits (85), Expect = 0.006
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 1 MADEEKLPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
+ DE LPPGWE + ++G+ Y+ NHI + W+ P
Sbjct: 120 VTDELPLPPGWEMTFT-ATGQRYFLNHIEKITTWQDP 155
>gi|40806211 WW domain containing E3 ubiquitin protein ligase 2
isoform 2 [Homo sapiens]
Length = 431
Score = 35.8 bits (81), Expect = 0.017
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 1 MADEEKLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNG 48
M E LPPGWE + + S G Y+ +H T + ++ P SG K G
Sbjct: 1 MIQEPALPPGWEMKYT-SEGVRYFVDHNTRTTTFKDPRPGFESGTKQG 47
>gi|5174751 Yes-associated protein 1, 65kDa isoform 2 [Homo sapiens]
Length = 454
Score = 35.4 bits (80), Expect = 0.022
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 3 DEEKLPPGWEKRMSRSSGRVYYFNHITNASQWERP 37
D+ LP GWE + SSG+ Y+ NHI + W+ P
Sbjct: 169 DDVPLPAGWEMAKT-SSGQRYFLNHIDQTTTWQDP 202
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.128 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,937,699
Number of Sequences: 37866
Number of extensions: 304544
Number of successful extensions: 1108
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 919
Number of HSP's gapped (non-prelim): 182
length of query: 163
length of database: 18,247,518
effective HSP length: 94
effective length of query: 69
effective length of database: 14,688,114
effective search space: 1013479866
effective search space used: 1013479866
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.