Guide to the Human Genome
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Name: OR52A5 Sequence: fasta or formatted (316aa) NCBI GI: 52353324
Description:

olfactory receptor, family 52, subfamily A, member 5

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         22           2
 C cysteine            2.8          9           2
 D aspartate           1.9          6           1
 E glutamate           2.2          7           1
 F phenylalanine       9.8         31           3
 G glycine             4.7         15           1
 H histidine           4.1         13           1
 I isoleucine         14.2         45           2
 K lysine              4.1         13           2
 L leucine            12.3         39           2
 M methionine          2.8          9           1
 N asparagine          2.5          8           1
 P proline             4.7         15           2
 Q glutamine           3.2         10           2
 R arginine            2.5          8           1
 S serine              5.4         17           1
 T threonine           4.7         15           2
 V valine              6.0         19           1
 W tryptophan          0.9          3           1
 Y tyrosine            3.8         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 52, subfamily A, member 5... 
OR52A1                0.739   olfactory receptor, family 52, subfamily A, member ...
OR52A4                0.573   olfactory receptor, family 52, subfamily A, member 4...
OR52N4                0.511   olfactory receptor, family 52, subfamily N, member ...
OR52E2                0.494   olfactory receptor, family 52, subfamily E, member 2...
OR52M1                0.489   olfactory receptor, family 52, subfamily M, member 1...
OR52E4                0.483   olfactory receptor, family 52, subfamily E, member 4...
OR52R1                0.480   olfactory receptor, family 52, subfamily R, member ...
OR52E8                0.478   olfactory receptor, family 52, subfamily E, member 8...
OR52J3                0.478   olfactory receptor, family 52, subfamily J, member ...
OR52N2                0.471   olfactory receptor, family 52, subfamily N, member 2...
OR52N1                0.470   olfactory receptor, family 52, subfamily N, member 1...
OR52D1                0.467   olfactory receptor, family 52, subfamily D, member 1...
OR52K2                0.462   olfactory receptor, family 52, subfamily K, member 2...
OR52B2                0.457   olfactory receptor, family 52, subfamily B, member 2...
OR52L1                0.457   olfactory receptor, family 52, subfamily L, member ...
OR52N5                0.455   olfactory receptor, family 52, subfamily N, member 5...
OR52E6                0.454   olfactory receptor, family 52, subfamily E, member 6...
OR52H1                0.452   olfactory receptor, family 52, subfamily H, member 1...
OR51E2                0.450   olfactory receptor, family 51, subfamily E, member 2...
OR51E1                0.447   olfactory receptor, family 51, subfamily E, member ...
OR52K1                0.445   olfactory receptor, family 52, subfamily K, member 1...
OR51F2                0.437   olfactory receptor, family 51, subfamily F, member 2...
OR51I2                0.434   olfactory receptor, family 51, subfamily I, member 2...
OR52B4                0.431   olfactory receptor, family 52, subfamily B, member 4...
OR52W1                0.416   olfactory receptor, family 52, subfamily W, member 1...
OR51G2                0.416   olfactory receptor, family 51, subfamily G, member 2...
OR51G1                0.411   olfactory receptor, family 51, subfamily G, member 1...
OR51L1                0.408   olfactory receptor, family 51, subfamily L, member 1...
OR51I1                0.400   olfactory receptor, family 51, subfamily I, member 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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