Guide to the Human Genome
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Name: OR52E8 Sequence: fasta or formatted (317aa) NCBI GI: 52353326
Description:

olfactory receptor, family 52, subfamily E, member 8

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         21           1
 C cysteine            2.2          7           1
 D aspartate           1.6          5           1
 E glutamate           2.5          8           1
 F phenylalanine       8.2         26           3
 G glycine             5.7         18           2
 H histidine           4.4         14           1
 I isoleucine         11.4         36           2
 K lysine              2.5          8           1
 L leucine            14.5         46           4
 M methionine          3.5         11           1
 N asparagine          3.2         10           1
 P proline             4.7         15           2
 Q glutamine           1.6          5           1
 R arginine            4.7         15           1
 S serine              6.0         19           2
 T threonine           5.0         16           1
 V valine              6.9         22           3
 W tryptophan          0.9          3           1
 Y tyrosine            3.8         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 52, subfamily E, member 8... 
OR52E6                0.874   olfactory receptor, family 52, subfamily E, member 6...
OR52E4                0.701   olfactory receptor, family 52, subfamily E, member 4...
OR52E2                0.650   olfactory receptor, family 52, subfamily E, member 2...
OR52J3                0.605   olfactory receptor, family 52, subfamily J, member ...
OR52D1                0.577   olfactory receptor, family 52, subfamily D, member 1...
OR52H1                0.557   olfactory receptor, family 52, subfamily H, member 1...
OR52B2                0.547   olfactory receptor, family 52, subfamily B, member 2...
OR52K2                0.515   olfactory receptor, family 52, subfamily K, member 2...
OR52N4                0.511   olfactory receptor, family 52, subfamily N, member ...
OR52K1                0.503   olfactory receptor, family 52, subfamily K, member 1...
OR52B4                0.500   olfactory receptor, family 52, subfamily B, member 4...
OR52N2                0.495   olfactory receptor, family 52, subfamily N, member 2...
OR52R1                0.493   olfactory receptor, family 52, subfamily R, member ...
OR52N1                0.492   olfactory receptor, family 52, subfamily N, member 1...
OR52A5                0.479   olfactory receptor, family 52, subfamily A, member 5...
OR52B6                0.477   olfactory receptor, family 52, subfamily B, member ...
OR52N5                0.475   olfactory receptor, family 52, subfamily N, member 5...
OR52L1                0.471   olfactory receptor, family 52, subfamily L, member ...
OR52A1                0.471   olfactory receptor, family 52, subfamily A, member ...
OR52M1                0.466   olfactory receptor, family 52, subfamily M, member 1...
OR51E2                0.459   olfactory receptor, family 51, subfamily E, member 2...
OR51G2                0.459   olfactory receptor, family 51, subfamily G, member 2...
OR51I2                0.451   olfactory receptor, family 51, subfamily I, member 2...
OR51F2                0.449   olfactory receptor, family 51, subfamily F, member 2...
OR51G1                0.433   olfactory receptor, family 51, subfamily G, member 1...
OR51E1                0.433   olfactory receptor, family 51, subfamily E, member ...
OR52I2                0.422   olfactory receptor, family 52, subfamily I, member 2...
OR51F1                0.420   olfactory receptor, family 51, subfamily F, member 1...
OR51M1                0.415   olfactory receptor, family 51, subfamily M, member 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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