NHLH1 31494

Name: NHLH1	Sequence: fasta or formatted (133aa)		NCBI GI: 5031943
Description: nescient helix loop helix 1		Referenced in: Helix-Loop-Helix Transcription Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.3 11 1 C cysteine 1.5 2 1 D aspartate 5.3 7 1 E glutamate 8.3 11 2 F phenylalanine 2.3 3 1 G glycine 11.3 15 3 H histidine 3.0 4 1 I isoleucine 3.8 5 1 K lysine 4.5 6 2 L leucine 11.3 15 2 M methionine 2.3 3 2 N asparagine 2.3 3 1 P proline 8.3 11 2 Q glutamine 1.5 2 1 R arginine 11.3 15 6 S serine 5.3 7 1 T threonine 5.3 7 1 V valine 2.3 3 1 W tryptophan 0.0 0 0 Y tyrosine 2.3 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nescient helix loop helix 1 NHLH2 0.482 nescient helix loop helix 2 NHLH2 0.482 nescient helix loop helix 2 TWIST1 0.181 twist SCXB 0.169 scleraxis homolog B SCXA 0.169 scleraxis homolog A HAND2 0.165 basic helix-loop-helix transcription factor HAND2 [H... TCF15 0.161 basic helix-loop-helix transcription factor 15 [Homo... LOC100129654 0.161 PREDICTED: similar to transcription factor 23 [Homo... LOC100129654 0.161 PREDICTED: similar to transcription factor 23 [Homo... HAND1 0.153 basic helix-loop-helix transcription factor HAND1 [Ho... PTF1A 0.153 pancreas specific transcription factor, 1a TAL1 0.153 T-cell acute lymphocytic leukemia 1 TAL2 0.149 T-cell acute lymphocytic leukemia 2 LYL1 0.145 lymphoblastic leukemia derived sequence 1 MSC 0.141 musculin TWIST2 0.137 twist homolog 2 TCF21 0.137 transcription factor 21 TCF21 0.137 transcription factor 21 LOC100129654 0.137 PREDICTED: similar to transcription factor 23 [Homo... FERD3L 0.120 nephew of atonal 3 NEUROG2 0.120 neurogenin 2 BHLHA15 0.116 basic helix-loop-helix family, member a15 ATOH7 0.108 atonal homolog 7 NEUROG3 0.104 neurogenin 3 TCF23 0.104 transcription factor 23 NEUROG1 0.100 neurogenin 1 MESP2 0.100 mesoderm posterior 2 homolog ASCL1 0.096 achaete-scute complex homolog 1 NEUROD6 0.096 neurogenic differentiation 6 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.