Guide to the Human Genome
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Name: TEX2 Sequence: fasta or formatted (1134aa) NCBI GI: 38679909
Description:

testis expressed sequence 2

Referenced in:

Additional Conserved Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         55           2
 C cysteine            1.0         11           1
 D aspartate           4.9         55           2
 E glutamate           9.6        109           9
 F phenylalanine       3.1         35           2
 G glycine             5.6         63           2
 H histidine           2.5         28           1
 I isoleucine          4.0         45           2
 K lysine              8.2         93           3
 L leucine             9.9        112           3
 M methionine          2.0         23           1
 N asparagine          2.2         25           3
 P proline             7.8         89           4
 Q glutamine           3.1         35           2
 R arginine            4.1         46           2
 S serine             12.5        142           4
 T threonine           5.2         59           2
 V valine              5.9         67           2
 W tryptophan          1.0         11           1
 Y tyrosine            2.7         31           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   testis expressed sequence 2 
PRDM2                 0.012   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.012   retinoblastoma protein-binding zinc finger protein i...
PRDM2                 0.012   retinoblastoma protein-binding zinc finger protein i...
MLLT3                 0.012   myeloid/lymphoid or mixed-lineage leukemia (trithor...
DIDO1                 0.011   death inducer-obliterator 1 isoform c 
MAGEC1                0.011   melanoma antigen family C, 1 
MUC17                 0.011   mucin 17 
SRRM2                 0.011   splicing coactivator subunit SRm300 
MAP4                  0.010   microtubule-associated protein 4 isoform 4 
MAP4                  0.010   microtubule-associated protein 4 isoform 2 
MAP4                  0.010   microtubule-associated protein 4 isoform 1 
TGOLN2                0.010   trans-golgi network protein 2 
NAV2                  0.010   neuron navigator 2 isoform 3 
NAV2                  0.010   neuron navigator 2 isoform 1 
NAV2                  0.010   neuron navigator 2 isoform 2 
BAT2D1                0.010   HBxAg transactivated protein 2 
MAP4                  0.010   microtubule-associated protein 4 isoform 5 
TNRC18                0.009   trinucleotide repeat containing 18 
SRCAP                 0.009   Snf2-related CBP activator protein 
MUC12                 0.009   PREDICTED: mucin 12 
MUC3A                 0.009   PREDICTED: mucin 3A, intestinal 
MUC4                  0.009   mucin 4 isoform a 
MUC5AC                0.009   mucin 5AC 
MUC5B                 0.009   mucin 5, subtype B, tracheobronchial 
MLL                   0.009   myeloid/lymphoid or mixed-lineage leukemia protein [...
POLR2A                0.009   DNA-directed RNA polymerase II A 
PELP1                 0.009   proline, glutamic acid and leucine rich protein 1 [...
NAV3                  0.009   neuron navigator 3 
ALMS1                 0.009   Alstrom syndrome 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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