Search of human proteins with 30061567

Search of human proteins with 30061567

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|30061567 La ribonucleoprotein domain family member 2 isoform
1 [Homo sapiens]
         (914 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|30061567 La ribonucleoprotein domain family member 2 isoform ...  1881   0.0  
gi|30061565 La ribonucleoprotein domain family member 2 isoform ...  1043   0.0  
gi|61102725 la related protein isoform 2 [Homo sapiens]              1038   0.0  
gi|39725634 la related protein isoform 1 [Homo sapiens]              1038   0.0  
gi|30061569 La ribonucleoprotein domain family member 2 isoform ...   681   0.0  
gi|239753842 PREDICTED: similar to hCG2040199 [Homo sapiens]          157   6e-38
gi|169166778 PREDICTED: similar to hCG2040199 [Homo sapiens]          157   6e-38
gi|169166363 PREDICTED: similar to hCG2040199 [Homo sapiens]          157   6e-38
gi|40353738 c-Mpl binding protein isoform a [Homo sapiens]             69   3e-11
gi|40353736 c-Mpl binding protein isoform c [Homo sapiens]             69   3e-11
gi|40353740 c-Mpl binding protein isoform b [Homo sapiens]             69   3e-11
gi|10835067 autoantigen La [Homo sapiens]                              59   3e-08
gi|167234419 thyroid hormone receptor associated protein 3 [Homo...    53   1e-06
gi|57634536 La ribonucleoprotein domain family, member 4B [Homo ...    53   1e-06
gi|37537710 La ribonucleoprotein domain family, member 6 isoform...    53   1e-06
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ...    50   7e-06
gi|109809739 La ribonucleoprotein domain family, member 7 [Homo ...    49   2e-05
gi|109809741 La ribonucleoprotein domain family, member 7 [Homo ...    49   2e-05
gi|213385278 TNF receptor-associated factor 3 interacting protei...    47   6e-05
gi|20070262 TNF receptor-associated factor 3 interacting protein...    47   6e-05
gi|169160654 PREDICTED: similar to small nuclear ribonucleoprote...    45   2e-04
gi|5902102 small nuclear ribonucleoprotein D1 polypeptide 16kDa ...    45   2e-04
gi|7710145 methyl-CpG binding domain protein 2 testis-specific i...    45   2e-04
gi|4505117 methyl-CpG binding domain protein 2 isoform 1 [Homo s...    45   2e-04
gi|29568103 U1 small nuclear ribonucleoprotein 70 kDa [Homo sapi...    44   7e-04
gi|158854042 hypothetical protein LOC222183 [Homo sapiens]             44   7e-04
gi|38488727 arginine/serine-rich coiled-coil 1 [Homo sapiens]          43   0.001
gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens]           43   0.001
gi|40068059 CBF1 interacting corepressor [Homo sapiens]                43   0.002
gi|55741709 RNA binding motif protein 25 [Homo sapiens]                42   0.002

>gi|30061567 La ribonucleoprotein domain family member 2 isoform 1
           [Homo sapiens]
          Length = 914

 Score = 1881 bits (4872), Expect = 0.0
 Identities = 914/914 (100%), Positives = 914/914 (100%)

Query: 1   MENWPTPSELVNTGFQSVLSQGNKKPQNRKEKEEKVEKRSNSDSKENRETKLNGPGENVS 60
           MENWPTPSELVNTGFQSVLSQGNKKPQNRKEKEEKVEKRSNSDSKENRETKLNGPGENVS
Sbjct: 1   MENWPTPSELVNTGFQSVLSQGNKKPQNRKEKEEKVEKRSNSDSKENRETKLNGPGENVS 60

Query: 61  EDEAQSSNQRKRANKHKWVPLHLDVVRSESQERPGSRNSSRCQPEANKPTHNNRRNDTRS 120
           EDEAQSSNQRKRANKHKWVPLHLDVVRSESQERPGSRNSSRCQPEANKPTHNNRRNDTRS
Sbjct: 61  EDEAQSSNQRKRANKHKWVPLHLDVVRSESQERPGSRNSSRCQPEANKPTHNNRRNDTRS 120

Query: 121 WKRDREKRDDQDDVSSVRSEGGNIRGSFRGRGRGRGRGRGRGRGNPRLNFDYSYGYQEHG 180
           WKRDREKRDDQDDVSSVRSEGGNIRGSFRGRGRGRGRGRGRGRGNPRLNFDYSYGYQEHG
Sbjct: 121 WKRDREKRDDQDDVSSVRSEGGNIRGSFRGRGRGRGRGRGRGRGNPRLNFDYSYGYQEHG 180

Query: 181 ERTDQPFQTELNTSMMYYYDDGTGVQVYPVEEALLKEYIKRQIEYYFSVENLERDFFLRG 240
           ERTDQPFQTELNTSMMYYYDDGTGVQVYPVEEALLKEYIKRQIEYYFSVENLERDFFLRG
Sbjct: 181 ERTDQPFQTELNTSMMYYYDDGTGVQVYPVEEALLKEYIKRQIEYYFSVENLERDFFLRG 240

Query: 241 KMDEQGFLPISLIAGFQRVQALTTNLNLILEALKDSTEVEIVDEKMRKKIEPEKWPIPGP 300
           KMDEQGFLPISLIAGFQRVQALTTNLNLILEALKDSTEVEIVDEKMRKKIEPEKWPIPGP
Sbjct: 241 KMDEQGFLPISLIAGFQRVQALTTNLNLILEALKDSTEVEIVDEKMRKKIEPEKWPIPGP 300

Query: 301 PPRSVPPTDFSQLIDCPEFVPGQAFCSHTESAPNSPRIGSPLSPKKNSETSILQAMSRGL 360
           PPRSVPPTDFSQLIDCPEFVPGQAFCSHTESAPNSPRIGSPLSPKKNSETSILQAMSRGL
Sbjct: 301 PPRSVPPTDFSQLIDCPEFVPGQAFCSHTESAPNSPRIGSPLSPKKNSETSILQAMSRGL 360

Query: 361 STSLPDLDSEPWIEVKKRHQPAPVKLRESVSVPEGSLNQLCSSEEPEQEELDFLFDEEIE 420
           STSLPDLDSEPWIEVKKRHQPAPVKLRESVSVPEGSLNQLCSSEEPEQEELDFLFDEEIE
Sbjct: 361 STSLPDLDSEPWIEVKKRHQPAPVKLRESVSVPEGSLNQLCSSEEPEQEELDFLFDEEIE 420

Query: 421 QIGRKNTFTDWSDNDSDYEIDDQDLNKILIVTQTPPYVKKHPGGDRTGTHMSRAKITSEL 480
           QIGRKNTFTDWSDNDSDYEIDDQDLNKILIVTQTPPYVKKHPGGDRTGTHMSRAKITSEL
Sbjct: 421 QIGRKNTFTDWSDNDSDYEIDDQDLNKILIVTQTPPYVKKHPGGDRTGTHMSRAKITSEL 480

Query: 481 AKVINDGLYYYEQDLWMEEDENKHTAIKQEVENFKKLNLISKEQFENLTPELPFEPNQEV 540
           AKVINDGLYYYEQDLWMEEDENKHTAIKQEVENFKKLNLISKEQFENLTPELPFEPNQEV
Sbjct: 481 AKVINDGLYYYEQDLWMEEDENKHTAIKQEVENFKKLNLISKEQFENLTPELPFEPNQEV 540

Query: 541 PVAPSQSRQGGVQGVLHIPKKDLTDELAQKLFDVSEITSAAMVHSLPTAVPESPRIHPTR 600
           PVAPSQSRQGGVQGVLHIPKKDLTDELAQKLFDVSEITSAAMVHSLPTAVPESPRIHPTR
Sbjct: 541 PVAPSQSRQGGVQGVLHIPKKDLTDELAQKLFDVSEITSAAMVHSLPTAVPESPRIHPTR 600

Query: 601 TPKTPRTPRLQDPNKTPRFYPVVKEPKAIDVKSPRKRKTRHSTNPPLECHVGWVMDSRDR 660
           TPKTPRTPRLQDPNKTPRFYPVVKEPKAIDVKSPRKRKTRHSTNPPLECHVGWVMDSRDR
Sbjct: 601 TPKTPRTPRLQDPNKTPRFYPVVKEPKAIDVKSPRKRKTRHSTNPPLECHVGWVMDSRDR 660

Query: 661 GPGTSSVSTSNASPSEGAPLAGSYGCTPHSFPKFQHPSHELLKENGFTQQVYHKYRRRCL 720
           GPGTSSVSTSNASPSEGAPLAGSYGCTPHSFPKFQHPSHELLKENGFTQQVYHKYRRRCL
Sbjct: 661 GPGTSSVSTSNASPSEGAPLAGSYGCTPHSFPKFQHPSHELLKENGFTQQVYHKYRRRCL 720

Query: 721 SERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFRQLAWEDAKENYRYGLECLFRFY 780
           SERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFRQLAWEDAKENYRYGLECLFRFY
Sbjct: 721 SERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFRQLAWEDAKENYRYGLECLFRFY 780

Query: 781 SYGLEKKFRREIFQDFQEETKKDYESGQLYGLEKFWAYLKYSQSKTQSIDPKLQEYLCSF 840
           SYGLEKKFRREIFQDFQEETKKDYESGQLYGLEKFWAYLKYSQSKTQSIDPKLQEYLCSF
Sbjct: 781 SYGLEKKFRREIFQDFQEETKKDYESGQLYGLEKFWAYLKYSQSKTQSIDPKLQEYLCSF 840

Query: 841 KRLEDFRVDPPISDEFGRKRHSSTSGEESNRHRLPPNSSTKPPNAAKPTSTSELQVPINS 900
           KRLEDFRVDPPISDEFGRKRHSSTSGEESNRHRLPPNSSTKPPNAAKPTSTSELQVPINS
Sbjct: 841 KRLEDFRVDPPISDEFGRKRHSSTSGEESNRHRLPPNSSTKPPNAAKPTSTSELQVPINS 900

Query: 901 PRRNISPESSDNSH 914
           PRRNISPESSDNSH
Sbjct: 901 PRRNISPESSDNSH 914


>gi|30061565 La ribonucleoprotein domain family member 2 isoform 2
           [Homo sapiens]
          Length = 522

 Score = 1043 bits (2697), Expect = 0.0
 Identities = 508/508 (100%), Positives = 508/508 (100%)

Query: 1   MENWPTPSELVNTGFQSVLSQGNKKPQNRKEKEEKVEKRSNSDSKENRETKLNGPGENVS 60
           MENWPTPSELVNTGFQSVLSQGNKKPQNRKEKEEKVEKRSNSDSKENRETKLNGPGENVS
Sbjct: 1   MENWPTPSELVNTGFQSVLSQGNKKPQNRKEKEEKVEKRSNSDSKENRETKLNGPGENVS 60

Query: 61  EDEAQSSNQRKRANKHKWVPLHLDVVRSESQERPGSRNSSRCQPEANKPTHNNRRNDTRS 120
           EDEAQSSNQRKRANKHKWVPLHLDVVRSESQERPGSRNSSRCQPEANKPTHNNRRNDTRS
Sbjct: 61  EDEAQSSNQRKRANKHKWVPLHLDVVRSESQERPGSRNSSRCQPEANKPTHNNRRNDTRS 120

Query: 121 WKRDREKRDDQDDVSSVRSEGGNIRGSFRGRGRGRGRGRGRGRGNPRLNFDYSYGYQEHG 180
           WKRDREKRDDQDDVSSVRSEGGNIRGSFRGRGRGRGRGRGRGRGNPRLNFDYSYGYQEHG
Sbjct: 121 WKRDREKRDDQDDVSSVRSEGGNIRGSFRGRGRGRGRGRGRGRGNPRLNFDYSYGYQEHG 180

Query: 181 ERTDQPFQTELNTSMMYYYDDGTGVQVYPVEEALLKEYIKRQIEYYFSVENLERDFFLRG 240
           ERTDQPFQTELNTSMMYYYDDGTGVQVYPVEEALLKEYIKRQIEYYFSVENLERDFFLRG
Sbjct: 181 ERTDQPFQTELNTSMMYYYDDGTGVQVYPVEEALLKEYIKRQIEYYFSVENLERDFFLRG 240

Query: 241 KMDEQGFLPISLIAGFQRVQALTTNLNLILEALKDSTEVEIVDEKMRKKIEPEKWPIPGP 300
           KMDEQGFLPISLIAGFQRVQALTTNLNLILEALKDSTEVEIVDEKMRKKIEPEKWPIPGP
Sbjct: 241 KMDEQGFLPISLIAGFQRVQALTTNLNLILEALKDSTEVEIVDEKMRKKIEPEKWPIPGP 300

Query: 301 PPRSVPPTDFSQLIDCPEFVPGQAFCSHTESAPNSPRIGSPLSPKKNSETSILQAMSRGL 360
           PPRSVPPTDFSQLIDCPEFVPGQAFCSHTESAPNSPRIGSPLSPKKNSETSILQAMSRGL
Sbjct: 301 PPRSVPPTDFSQLIDCPEFVPGQAFCSHTESAPNSPRIGSPLSPKKNSETSILQAMSRGL 360

Query: 361 STSLPDLDSEPWIEVKKRHQPAPVKLRESVSVPEGSLNQLCSSEEPEQEELDFLFDEEIE 420
           STSLPDLDSEPWIEVKKRHQPAPVKLRESVSVPEGSLNQLCSSEEPEQEELDFLFDEEIE
Sbjct: 361 STSLPDLDSEPWIEVKKRHQPAPVKLRESVSVPEGSLNQLCSSEEPEQEELDFLFDEEIE 420

Query: 421 QIGRKNTFTDWSDNDSDYEIDDQDLNKILIVTQTPPYVKKHPGGDRTGTHMSRAKITSEL 480
           QIGRKNTFTDWSDNDSDYEIDDQDLNKILIVTQTPPYVKKHPGGDRTGTHMSRAKITSEL
Sbjct: 421 QIGRKNTFTDWSDNDSDYEIDDQDLNKILIVTQTPPYVKKHPGGDRTGTHMSRAKITSEL 480

Query: 481 AKVINDGLYYYEQDLWMEEDENKHTAIK 508
           AKVINDGLYYYEQDLWMEEDENKHTAIK
Sbjct: 481 AKVINDGLYYYEQDLWMEEDENKHTAIK 508


>gi|61102725 la related protein isoform 2 [Homo sapiens]
          Length = 1096

 Score = 1038 bits (2683), Expect = 0.0
 Identities = 545/938 (58%), Positives = 672/938 (71%), Gaps = 52/938 (5%)

Query: 3    NWPTPSELVNTGFQ--SVLSQGNKKPQNRKEKEEKVEKRSNSDSKENRETKLNGPGENVS 60
            NWPTP E+ +   Q  S   Q  +K   +K+ +E+ EK   SDSKE+ +TK +  GE  +
Sbjct: 175  NWPTPGEIAHKSVQPQSHKPQPTRKLPPKKDMKEQ-EKGEGSDSKESPKTKSDESGEEKN 233

Query: 61   EDE-AQSSNQRKRANKHKWVPLHLDVVRSESQERPGSRNSSRCQPE-----------ANK 108
             DE  Q   Q+K+ NKHKWVPL +D+     +E+  SR +   +P            +  
Sbjct: 234  GDEDCQRGGQKKKGNKHKWVPLQIDMKPEVPREKLASRPTRPPEPRHIPANRGEIKGSES 293

Query: 109  PTHNNRRNDTRSWKRDREKRD---DQDDVSSVRSEG-GNIRGSFRGRGRGRGRGRGRGRG 164
             T+      T +W+ + +      DQD+ SSV+S+G G  R SFRGRGRGRGRGRGRGRG
Sbjct: 294  ATYVPVAPPTPAWQPEIKPEPAWHDQDETSSVKSDGAGGARASFRGRGRGRGRGRGRGRG 353

Query: 165  NPRLNFDYSYGYQEHGERTDQPFQTELNTSMMYYYDDGTGVQVYPVEEALLKEYIKRQIE 224
              R +FDY +GY++  +  + P   +   ++ YY+D+ +  ++Y V++ LLK+YIKRQIE
Sbjct: 354  GTRTHFDYQFGYRKF-DGVEGPRTPKYMNNITYYFDNVSSTELYSVDQELLKDYIKRQIE 412

Query: 225  YYFSVENLERDFFLRGKMDEQGFLPISLIAGFQRVQALTTNLNLILEALKDSTEVEIVDE 284
            YYFSV+NLERDFFLR KMD  GFLPI+LIA F RVQALTT+++LI  ALKDS  VEIVDE
Sbjct: 413  YYFSVDNLERDFFLRRKMDADGFLPITLIASFHRVQALTTDISLIFAALKDSKVVEIVDE 472

Query: 285  KMRKKIEPEKWPIPGPPPRSVPPTDFSQLIDCPEFVPGQAFCSHTESAPNSPRIGSPLSP 344
            K+R++ EPEKWP+P  P      TDFSQL++CPEFVP Q +   TESAP SPR  +P+ P
Sbjct: 473  KVRRREEPEKWPLP--PIVDYSQTDFSQLLNCPEFVPRQHYQKETESAPGSPRAVTPV-P 529

Query: 345  KKNSETSILQAMSRGLSTSLPDLDSEPWIEVKKRHQPAPVKLRES--------VSVPEG- 395
             K  E S L+ + +GLS SLPDLDSE WIEVKKR +P+P + ++S         S+P+  
Sbjct: 530  TKTEEVSNLKTLPKGLSASLPDLDSENWIEVKKRPRPSPARPKKSEESRFSHLTSLPQQL 589

Query: 396  SLNQLCSSEEPEQEELDFLFDEEIEQI-GRKNTFTDWSDNDSDYEIDDQDLNKILIVTQT 454
               QL S ++ EQEELDFLFDEE+EQ+ GRKNTFT WSD +SDYEIDD+D+NKILIVTQT
Sbjct: 590  PSQQLMSKDQDEQEELDFLFDEEMEQMDGRKNTFTAWSDEESDYEIDDRDVNKILIVTQT 649

Query: 455  PPYVKKHPGGDRTGTHMSRAKITSELAKVINDGLYYYEQDLWMEEDENKHTAIKQEVENF 514
            P Y+++HPGGDRTG H SRAK+++ELAKVINDGL+YYEQDLW E+ E +++ IKQEVENF
Sbjct: 650  PHYMRRHPGGDRTGNHTSRAKMSAELAKVINDGLFYYEQDLWAEKFEPEYSQIKQEVENF 709

Query: 515  KKLNLISKEQFENLTPELPFEPNQEVPVAPSQSRQGGVQGVLHIPKKDLTDELAQKLFDV 574
            KK+N+IS+EQF+ LTPE P +PNQEVP  P + +Q        +P    TD LA KLF  
Sbjct: 710  KKVNMISREQFDTLTPEPPVDPNQEVPPGPPRFQQ--------VP----TDALANKLFGA 757

Query: 575  SEITSAAMVHSLPTAVPESPRIHPTRTPKTPRTPRLQDPNKTPRFYPVVKEPKAIDVKSP 634
             E ++ A   SLPT VPESP    TRTP+TPRTP+L+D ++T RFYPVVKE + +D K P
Sbjct: 758  PEPSTIA--RSLPTTVPESPNYRNTRTPRTPRTPQLKDSSQTSRFYPVVKEGRTLDAKMP 815

Query: 635  RKRKTRHSTNPPLECHVGWVMDSRDRGPGTSSVSTSNASPSEGAPLAGSYGCTPHSFPKF 694
            RKRKTRHS+NPPLE HVGWVMDSR+  P T+S+S+S   PSEG P  GSYGCTP S PKF
Sbjct: 816  RKRKTRHSSNPPLESHVGWVMDSREHRPRTASISSS---PSEGTPTVGSYGCTPQSLPKF 872

Query: 695  QHPSHELLKENGFTQQVYHKYRRRCLSERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMY 754
            QHPSHELLKENGFTQ VYHKYRRRCL+ERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMY
Sbjct: 873  QHPSHELLKENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMY 932

Query: 755  EEFRQLAWEDAKENYRYGLECLFRFYSYGLEKKFRREIFQDFQEETKKDYESGQLYGLEK 814
            EEF+QLA EDAKE YRYGLECLFR+YSYGLEKKFR +IF+DFQEET KDYE+GQLYGLEK
Sbjct: 933  EEFKQLALEDAKEGYRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDYEAGQLYGLEK 992

Query: 815  FWAYLKYSQSKTQSIDPKLQEYLCSFKRLEDFRVDPPISDEFGRKRHS--STSGEESNRH 872
            FWA+LKYS++K   IDPKLQEYL  F+RLEDFRVDPP+ +E   KRHS  +  G    R 
Sbjct: 993  FWAFLKYSKAKNLDIDPKLQEYLGKFRRLEDFRVDPPMGEEGNHKRHSVVAGGGGGEGRK 1052

Query: 873  RLPPNSSTKPPNAAKPTSTSELQVPINSPRRNISPESS 910
            R P  SS++P        T     P+    +  S  S+
Sbjct: 1053 RCPSQSSSRPAAMISQPPTPPTGQPVREDAKWTSQHSN 1090


>gi|39725634 la related protein isoform 1 [Homo sapiens]
          Length = 1019

 Score = 1038 bits (2683), Expect = 0.0
 Identities = 545/938 (58%), Positives = 672/938 (71%), Gaps = 52/938 (5%)

Query: 3    NWPTPSELVNTGFQ--SVLSQGNKKPQNRKEKEEKVEKRSNSDSKENRETKLNGPGENVS 60
            NWPTP E+ +   Q  S   Q  +K   +K+ +E+ EK   SDSKE+ +TK +  GE  +
Sbjct: 98   NWPTPGEIAHKSVQPQSHKPQPTRKLPPKKDMKEQ-EKGEGSDSKESPKTKSDESGEEKN 156

Query: 61   EDE-AQSSNQRKRANKHKWVPLHLDVVRSESQERPGSRNSSRCQPE-----------ANK 108
             DE  Q   Q+K+ NKHKWVPL +D+     +E+  SR +   +P            +  
Sbjct: 157  GDEDCQRGGQKKKGNKHKWVPLQIDMKPEVPREKLASRPTRPPEPRHIPANRGEIKGSES 216

Query: 109  PTHNNRRNDTRSWKRDREKRD---DQDDVSSVRSEG-GNIRGSFRGRGRGRGRGRGRGRG 164
             T+      T +W+ + +      DQD+ SSV+S+G G  R SFRGRGRGRGRGRGRGRG
Sbjct: 217  ATYVPVAPPTPAWQPEIKPEPAWHDQDETSSVKSDGAGGARASFRGRGRGRGRGRGRGRG 276

Query: 165  NPRLNFDYSYGYQEHGERTDQPFQTELNTSMMYYYDDGTGVQVYPVEEALLKEYIKRQIE 224
              R +FDY +GY++  +  + P   +   ++ YY+D+ +  ++Y V++ LLK+YIKRQIE
Sbjct: 277  GTRTHFDYQFGYRKF-DGVEGPRTPKYMNNITYYFDNVSSTELYSVDQELLKDYIKRQIE 335

Query: 225  YYFSVENLERDFFLRGKMDEQGFLPISLIAGFQRVQALTTNLNLILEALKDSTEVEIVDE 284
            YYFSV+NLERDFFLR KMD  GFLPI+LIA F RVQALTT+++LI  ALKDS  VEIVDE
Sbjct: 336  YYFSVDNLERDFFLRRKMDADGFLPITLIASFHRVQALTTDISLIFAALKDSKVVEIVDE 395

Query: 285  KMRKKIEPEKWPIPGPPPRSVPPTDFSQLIDCPEFVPGQAFCSHTESAPNSPRIGSPLSP 344
            K+R++ EPEKWP+P  P      TDFSQL++CPEFVP Q +   TESAP SPR  +P+ P
Sbjct: 396  KVRRREEPEKWPLP--PIVDYSQTDFSQLLNCPEFVPRQHYQKETESAPGSPRAVTPV-P 452

Query: 345  KKNSETSILQAMSRGLSTSLPDLDSEPWIEVKKRHQPAPVKLRES--------VSVPEG- 395
             K  E S L+ + +GLS SLPDLDSE WIEVKKR +P+P + ++S         S+P+  
Sbjct: 453  TKTEEVSNLKTLPKGLSASLPDLDSENWIEVKKRPRPSPARPKKSEESRFSHLTSLPQQL 512

Query: 396  SLNQLCSSEEPEQEELDFLFDEEIEQI-GRKNTFTDWSDNDSDYEIDDQDLNKILIVTQT 454
               QL S ++ EQEELDFLFDEE+EQ+ GRKNTFT WSD +SDYEIDD+D+NKILIVTQT
Sbjct: 513  PSQQLMSKDQDEQEELDFLFDEEMEQMDGRKNTFTAWSDEESDYEIDDRDVNKILIVTQT 572

Query: 455  PPYVKKHPGGDRTGTHMSRAKITSELAKVINDGLYYYEQDLWMEEDENKHTAIKQEVENF 514
            P Y+++HPGGDRTG H SRAK+++ELAKVINDGL+YYEQDLW E+ E +++ IKQEVENF
Sbjct: 573  PHYMRRHPGGDRTGNHTSRAKMSAELAKVINDGLFYYEQDLWAEKFEPEYSQIKQEVENF 632

Query: 515  KKLNLISKEQFENLTPELPFEPNQEVPVAPSQSRQGGVQGVLHIPKKDLTDELAQKLFDV 574
            KK+N+IS+EQF+ LTPE P +PNQEVP  P + +Q        +P    TD LA KLF  
Sbjct: 633  KKVNMISREQFDTLTPEPPVDPNQEVPPGPPRFQQ--------VP----TDALANKLFGA 680

Query: 575  SEITSAAMVHSLPTAVPESPRIHPTRTPKTPRTPRLQDPNKTPRFYPVVKEPKAIDVKSP 634
             E ++ A   SLPT VPESP    TRTP+TPRTP+L+D ++T RFYPVVKE + +D K P
Sbjct: 681  PEPSTIA--RSLPTTVPESPNYRNTRTPRTPRTPQLKDSSQTSRFYPVVKEGRTLDAKMP 738

Query: 635  RKRKTRHSTNPPLECHVGWVMDSRDRGPGTSSVSTSNASPSEGAPLAGSYGCTPHSFPKF 694
            RKRKTRHS+NPPLE HVGWVMDSR+  P T+S+S+S   PSEG P  GSYGCTP S PKF
Sbjct: 739  RKRKTRHSSNPPLESHVGWVMDSREHRPRTASISSS---PSEGTPTVGSYGCTPQSLPKF 795

Query: 695  QHPSHELLKENGFTQQVYHKYRRRCLSERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMY 754
            QHPSHELLKENGFTQ VYHKYRRRCL+ERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMY
Sbjct: 796  QHPSHELLKENGFTQHVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMY 855

Query: 755  EEFRQLAWEDAKENYRYGLECLFRFYSYGLEKKFRREIFQDFQEETKKDYESGQLYGLEK 814
            EEF+QLA EDAKE YRYGLECLFR+YSYGLEKKFR +IF+DFQEET KDYE+GQLYGLEK
Sbjct: 856  EEFKQLALEDAKEGYRYGLECLFRYYSYGLEKKFRLDIFKDFQEETVKDYEAGQLYGLEK 915

Query: 815  FWAYLKYSQSKTQSIDPKLQEYLCSFKRLEDFRVDPPISDEFGRKRHS--STSGEESNRH 872
            FWA+LKYS++K   IDPKLQEYL  F+RLEDFRVDPP+ +E   KRHS  +  G    R 
Sbjct: 916  FWAFLKYSKAKNLDIDPKLQEYLGKFRRLEDFRVDPPMGEEGNHKRHSVVAGGGGGEGRK 975

Query: 873  RLPPNSSTKPPNAAKPTSTSELQVPINSPRRNISPESS 910
            R P  SS++P        T     P+    +  S  S+
Sbjct: 976  RCPSQSSSRPAAMISQPPTPPTGQPVREDAKWTSQHSN 1013


>gi|30061569 La ribonucleoprotein domain family member 2 isoform 3
           [Homo sapiens]
          Length = 358

 Score =  681 bits (1756), Expect = 0.0
 Identities = 329/329 (100%), Positives = 329/329 (100%)

Query: 1   MENWPTPSELVNTGFQSVLSQGNKKPQNRKEKEEKVEKRSNSDSKENRETKLNGPGENVS 60
           MENWPTPSELVNTGFQSVLSQGNKKPQNRKEKEEKVEKRSNSDSKENRETKLNGPGENVS
Sbjct: 1   MENWPTPSELVNTGFQSVLSQGNKKPQNRKEKEEKVEKRSNSDSKENRETKLNGPGENVS 60

Query: 61  EDEAQSSNQRKRANKHKWVPLHLDVVRSESQERPGSRNSSRCQPEANKPTHNNRRNDTRS 120
           EDEAQSSNQRKRANKHKWVPLHLDVVRSESQERPGSRNSSRCQPEANKPTHNNRRNDTRS
Sbjct: 61  EDEAQSSNQRKRANKHKWVPLHLDVVRSESQERPGSRNSSRCQPEANKPTHNNRRNDTRS 120

Query: 121 WKRDREKRDDQDDVSSVRSEGGNIRGSFRGRGRGRGRGRGRGRGNPRLNFDYSYGYQEHG 180
           WKRDREKRDDQDDVSSVRSEGGNIRGSFRGRGRGRGRGRGRGRGNPRLNFDYSYGYQEHG
Sbjct: 121 WKRDREKRDDQDDVSSVRSEGGNIRGSFRGRGRGRGRGRGRGRGNPRLNFDYSYGYQEHG 180

Query: 181 ERTDQPFQTELNTSMMYYYDDGTGVQVYPVEEALLKEYIKRQIEYYFSVENLERDFFLRG 240
           ERTDQPFQTELNTSMMYYYDDGTGVQVYPVEEALLKEYIKRQIEYYFSVENLERDFFLRG
Sbjct: 181 ERTDQPFQTELNTSMMYYYDDGTGVQVYPVEEALLKEYIKRQIEYYFSVENLERDFFLRG 240

Query: 241 KMDEQGFLPISLIAGFQRVQALTTNLNLILEALKDSTEVEIVDEKMRKKIEPEKWPIPGP 300
           KMDEQGFLPISLIAGFQRVQALTTNLNLILEALKDSTEVEIVDEKMRKKIEPEKWPIPGP
Sbjct: 241 KMDEQGFLPISLIAGFQRVQALTTNLNLILEALKDSTEVEIVDEKMRKKIEPEKWPIPGP 300

Query: 301 PPRSVPPTDFSQLIDCPEFVPGQAFCSHT 329
           PPRSVPPTDFSQLIDCPEFVPGQAFCSHT
Sbjct: 301 PPRSVPPTDFSQLIDCPEFVPGQAFCSHT 329


>gi|239753842 PREDICTED: similar to hCG2040199 [Homo sapiens]
          Length = 315

 Score =  157 bits (396), Expect = 6e-38
 Identities = 83/100 (83%), Positives = 88/100 (88%), Gaps = 2/100 (2%)

Query: 190 ELNTSMMYYYDDGTGVQVYPVEEALLKEYIKRQIEYYFSVENLERDFFLRGKMDEQGFLP 249
           ELNTSMMYYYDDGTGVQVY VEEALLKE IKRQIE+YF+ EN ERD+FLRGK  EQ  LP
Sbjct: 196 ELNTSMMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSERDYFLRGKRGEQDSLP 255

Query: 250 ISLIAGFQRVQALTTNLNLILEALKDSTEVEIVDEKMRKK 289
           I LIAGFQRVQALTT  NLI EALKDSTEVEI++EKMRKK
Sbjct: 256 IFLIAGFQRVQALTT--NLITEALKDSTEVEIMNEKMRKK 293



 Score = 64.7 bits (156), Expect = 4e-10
 Identities = 29/35 (82%), Positives = 32/35 (91%)

Query: 1   MENWPTPSELVNTGFQSVLSQGNKKPQNRKEKEEK 35
           MENW TPSELVNTG+QSVLSQGNKKPQ+RKEK  +
Sbjct: 161 MENWRTPSELVNTGYQSVLSQGNKKPQDRKEKRRE 195


>gi|169166778 PREDICTED: similar to hCG2040199 [Homo sapiens]
          Length = 315

 Score =  157 bits (396), Expect = 6e-38
 Identities = 83/100 (83%), Positives = 88/100 (88%), Gaps = 2/100 (2%)

Query: 190 ELNTSMMYYYDDGTGVQVYPVEEALLKEYIKRQIEYYFSVENLERDFFLRGKMDEQGFLP 249
           ELNTSMMYYYDDGTGVQVY VEEALLKE IKRQIE+YF+ EN ERD+FLRGK  EQ  LP
Sbjct: 196 ELNTSMMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSERDYFLRGKRGEQDSLP 255

Query: 250 ISLIAGFQRVQALTTNLNLILEALKDSTEVEIVDEKMRKK 289
           I LIAGFQRVQALTT  NLI EALKDSTEVEI++EKMRKK
Sbjct: 256 IFLIAGFQRVQALTT--NLITEALKDSTEVEIMNEKMRKK 293



 Score = 64.7 bits (156), Expect = 4e-10
 Identities = 29/35 (82%), Positives = 32/35 (91%)

Query: 1   MENWPTPSELVNTGFQSVLSQGNKKPQNRKEKEEK 35
           MENW TPSELVNTG+QSVLSQGNKKPQ+RKEK  +
Sbjct: 161 MENWRTPSELVNTGYQSVLSQGNKKPQDRKEKRRE 195


>gi|169166363 PREDICTED: similar to hCG2040199 [Homo sapiens]
          Length = 315

 Score =  157 bits (396), Expect = 6e-38
 Identities = 83/100 (83%), Positives = 88/100 (88%), Gaps = 2/100 (2%)

Query: 190 ELNTSMMYYYDDGTGVQVYPVEEALLKEYIKRQIEYYFSVENLERDFFLRGKMDEQGFLP 249
           ELNTSMMYYYDDGTGVQVY VEEALLKE IKRQIE+YF+ EN ERD+FLRGK  EQ  LP
Sbjct: 196 ELNTSMMYYYDDGTGVQVYRVEEALLKECIKRQIEHYFNAENSERDYFLRGKRGEQDSLP 255

Query: 250 ISLIAGFQRVQALTTNLNLILEALKDSTEVEIVDEKMRKK 289
           I LIAGFQRVQALTT  NLI EALKDSTEVEI++EKMRKK
Sbjct: 256 IFLIAGFQRVQALTT--NLITEALKDSTEVEIMNEKMRKK 293



 Score = 64.7 bits (156), Expect = 4e-10
 Identities = 29/35 (82%), Positives = 32/35 (91%)

Query: 1   MENWPTPSELVNTGFQSVLSQGNKKPQNRKEKEEK 35
           MENW TPSELVNTG+QSVLSQGNKKPQ+RKEK  +
Sbjct: 161 MENWRTPSELVNTGYQSVLSQGNKKPQDRKEKRRE 195


>gi|40353738 c-Mpl binding protein isoform a [Homo sapiens]
          Length = 724

 Score = 68.6 bits (166), Expect = 3e-11
 Identities = 48/137 (35%), Positives = 68/137 (49%), Gaps = 13/137 (9%)

Query: 164 GNPRLNFD----YSYGYQEHGERTDQPFQTELNTSMMYYYDDGTGVQVYPVEEAL----- 214
           GN  L+ D    Y   Y    E T      E +T  M    +    Q+Y V         
Sbjct: 56  GNAELSEDICKEYEVMYSSSCETTRNTTGIEESTDGMILGPEDLSYQIYDVSGESNSAVS 115

Query: 215 ---LKEYIKRQIEYYFSVENLERDFFLRGKMDEQGFLPISLIAGFQRVQALTTNLNLILE 271
              LKE +K+Q+E+ FS ENL +D +L  +MD   F+PI  +A  + ++ LTT+ +LILE
Sbjct: 116 TEDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDPDLILE 175

Query: 272 ALKDSTEVEIVDEKMRK 288
            L+ S  V+ VDEK  K
Sbjct: 176 VLRSSPMVQ-VDEKGEK 191


>gi|40353736 c-Mpl binding protein isoform c [Homo sapiens]
          Length = 653

 Score = 68.6 bits (166), Expect = 3e-11
 Identities = 48/137 (35%), Positives = 68/137 (49%), Gaps = 13/137 (9%)

Query: 164 GNPRLNFD----YSYGYQEHGERTDQPFQTELNTSMMYYYDDGTGVQVYPVEEAL----- 214
           GN  L+ D    Y   Y    E T      E +T  M    +    Q+Y V         
Sbjct: 56  GNAELSEDICKEYEVMYSSSCETTRNTTGIEESTDGMILGPEDLSYQIYDVSGESNSAVS 115

Query: 215 ---LKEYIKRQIEYYFSVENLERDFFLRGKMDEQGFLPISLIAGFQRVQALTTNLNLILE 271
              LKE +K+Q+E+ FS ENL +D +L  +MD   F+PI  +A  + ++ LTT+ +LILE
Sbjct: 116 TEDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDPDLILE 175

Query: 272 ALKDSTEVEIVDEKMRK 288
            L+ S  V+ VDEK  K
Sbjct: 176 VLRSSPMVQ-VDEKGEK 191


>gi|40353740 c-Mpl binding protein isoform b [Homo sapiens]
          Length = 730

 Score = 68.6 bits (166), Expect = 3e-11
 Identities = 48/137 (35%), Positives = 68/137 (49%), Gaps = 13/137 (9%)

Query: 164 GNPRLNFD----YSYGYQEHGERTDQPFQTELNTSMMYYYDDGTGVQVYPVEEAL----- 214
           GN  L+ D    Y   Y    E T      E +T  M    +    Q+Y V         
Sbjct: 62  GNAELSEDICKEYEVMYSSSCETTRNTTGIEESTDGMILGPEDLSYQIYDVSGESNSAVS 121

Query: 215 ---LKEYIKRQIEYYFSVENLERDFFLRGKMDEQGFLPISLIAGFQRVQALTTNLNLILE 271
              LKE +K+Q+E+ FS ENL +D +L  +MD   F+PI  +A  + ++ LTT+ +LILE
Sbjct: 122 TEDLKECLKKQLEFCFSRENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDPDLILE 181

Query: 272 ALKDSTEVEIVDEKMRK 288
            L+ S  V+ VDEK  K
Sbjct: 182 VLRSSPMVQ-VDEKGEK 197


>gi|10835067 autoantigen La [Homo sapiens]
          Length = 408

 Score = 58.5 bits (140), Expect = 3e-08
 Identities = 35/89 (39%), Positives = 56/89 (62%), Gaps = 4/89 (4%)

Query: 213 ALLKEYIKRQIEYYFSVENLERDFFLRGKMD-EQGFLPISLIAGFQRVQALTTNLNLILE 271
           A L+  I  QIEYYF   NL RD FL+ ++  ++G++P+ ++  F R+  LTT+ N+I+E
Sbjct: 11  AALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVE 70

Query: 272 ALKDSTE--VEIVDEKMRKKIEPEKWPIP 298
           AL  S    +EI ++K + +  P K P+P
Sbjct: 71  ALSKSKAELMEISEDKTKIRRSPSK-PLP 98


>gi|167234419 thyroid hormone receptor associated protein 3 [Homo
           sapiens]
          Length = 955

 Score = 53.1 bits (126), Expect = 1e-06
 Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 15/185 (8%)

Query: 30  KEKEEKVEKRSNSDS-KENRETKLNGPGENVSEDEAQSSNQRKRANKHKWVPLHLDVVRS 88
           K K++ V+ R + +  K+++E  L       S D   SS+ R+R+ + K    H    + 
Sbjct: 709 KYKDDPVDLRLDIERRKKHKERDLKRGKSRESVDSRDSSHSRERSAE-KTEKTHKGSKKQ 767

Query: 89  ESQERPGSRNSSRCQPEANKPTHNNRRNDTRSWKRDREKRDDQDDVSSVRSE-------- 140
           +   R  +R+ SR    +++ +H+ +  +      +RE+     D S + ++        
Sbjct: 768 KKHRR--ARDRSRSSSSSSQSSHSYKAEEYTEETEEREESTTGFDKSRLGTKDFVGPSER 825

Query: 141 -GGNIRGSFRGRGRGRGRGRGRGRGNPRLNFDYSYGYQEHGERTDQPFQTELNTSMMYYY 199
            GG  RG+F+ R RGRG GRG   GN   N +  +  +   E  D  +  +  +   Y +
Sbjct: 826 GGGRARGTFQFRARGRGWGRGNYSGNNNNNSNNDFQKRNREEEWDPEYTPK--SKKYYLH 883

Query: 200 DDGTG 204
           DD  G
Sbjct: 884 DDREG 888



 Score = 31.2 bits (69), Expect = 4.6
 Identities = 38/131 (29%), Positives = 55/131 (41%), Gaps = 15/131 (11%)

Query: 58  NVSEDEAQSSNQRKRANKHKWVPLHLDVVRSESQERPGSRN-SSRCQPEANKPTHNNRRN 116
           N S+  ++SS  R  A++ +         RS S  R   R  SSR +  +  P HN  RN
Sbjct: 5   NKSKSGSRSSRSRS-ASRSRSRSFSKSRSRSRSLSRSRKRRLSSRSRSRSYSPAHNRERN 63

Query: 117 DTRSWKRDREKRDDQDDVSSVRSEGGNIRGSFRGRGRG---RGRGRGRGRGNPRLNF-DY 172
             R + ++R+ R          + G      FRGR RG    G+    G GN R N+ +Y
Sbjct: 64  HPRVY-QNRDFRG--------HNRGYRRPYYFRGRNRGFYPWGQYNRGGYGNYRSNWQNY 114

Query: 173 SYGYQEHGERT 183
              Y     R+
Sbjct: 115 RQAYSPRRGRS 125



 Score = 30.4 bits (67), Expect = 7.9
 Identities = 35/153 (22%), Positives = 61/153 (39%), Gaps = 21/153 (13%)

Query: 21  QGNKKPQNRKEKEEKVEKRSNSDSKENRETKLNGPGENVSE-DEAQSSNQRKRANKHKWV 79
           +G+KK +  +   ++  + S+S S+ +   K     E   E +E+ +   + R     +V
Sbjct: 762 KGSKKQKKHRRARDR-SRSSSSSSQSSHSYKAEEYTEETEEREESTTGFDKSRLGTKDFV 820

Query: 80  PLHLDVVRSESQERPGSRNSSRCQPEA--------NKPTHNNRRNDTRSWKRDREKRDDQ 131
                       ER G R     Q  A        N   +NN  ++    KR+RE  ++ 
Sbjct: 821 G---------PSERGGGRARGTFQFRARGRGWGRGNYSGNNNNNSNNDFQKRNRE--EEW 869

Query: 132 DDVSSVRSEGGNIRGSFRGRGRGRGRGRGRGRG 164
           D   + +S+   +     G G  +   RGRGRG
Sbjct: 870 DPEYTPKSKKYYLHDDREGEGSDKWVSRGRGRG 902


>gi|57634536 La ribonucleoprotein domain family, member 4B [Homo
           sapiens]
          Length = 738

 Score = 52.8 bits (125), Expect = 1e-06
 Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 2/79 (2%)

Query: 216 KEYIKRQIEYYFSVENLERDFFLRGKMDEQGFLPISLIAGFQRVQALTTNLNLILEALKD 275
           +E +K+ +E+  S ENL  D +L  +MD   ++PI+ +A    ++ L+T+++LI+E L+ 
Sbjct: 157 REVLKKTLEFCLSRENLASDMYLISQMDSDQYVPITTVANLDHIKKLSTDVDLIVEVLRS 216

Query: 276 STEVEIVDEKMRKKIEPEK 294
              V+ VDEK  +K+ P +
Sbjct: 217 LPLVQ-VDEK-GEKVRPNQ 233


>gi|37537710 La ribonucleoprotein domain family, member 6 isoform 1
           [Homo sapiens]
          Length = 491

 Score = 52.8 bits (125), Expect = 1e-06
 Identities = 32/100 (32%), Positives = 58/100 (58%), Gaps = 6/100 (6%)

Query: 209 PVEEALLKEYIKRQIEYYFSVENLERDFFL--RGKMDEQGFLPISLIAGFQRVQALTTNL 266
           P +E L+K+ +  QIE+YFS ENLE+D FL    + ++ G++ + L+  F++V+ LT + 
Sbjct: 87  PPDEELIKKLVD-QIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDW 145

Query: 267 NLILEALKDSTEVEIVDEKMRKKIEPEKWPIPGPPPRSVP 306
                ALK S  +E+ ++  + +      P+P  P  ++P
Sbjct: 146 RTTAHALKYSVVLELNEDHRKVR---RTTPVPLFPNENLP 182


>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
           sapiens]
          Length = 600

 Score = 50.4 bits (119), Expect = 7e-06
 Identities = 45/166 (27%), Positives = 68/166 (40%), Gaps = 20/166 (12%)

Query: 21  QGNKKPQNRKEKEEKVEKRSNSDSKENRETKLNGPGENVSEDEAQSSNQR-------KRA 73
           Q ++K Q R E++ + E++     +  RE + N   E   E E +   QR       K  
Sbjct: 282 QTDRKRQRRTERDRETERKRERQRERERERERNRKRERERERERERERQRETERDREKER 341

Query: 74  NKHKWVPLHLDVVRSESQERPGSRNSSR---CQPEANKPTHNNRRNDTRSWKRDREK--- 127
            + +     +D  R+    R G R + R    + E ++ +   R    R   RDR+K   
Sbjct: 342 ERKRKRQTEMDRERNRQTGREGRRQAERERERERERDRQSAREREERERDRDRDRQKERE 401

Query: 128 ------RDDQDDVSSVRSEGGNIRGSFRGRGRGRGRGRGRGRGNPR 167
                 RD Q +    R E    R S RGR RGR R + +GR   R
Sbjct: 402 RQTEKDRDGQRETEKQR-EREKDRESERGRERGREREKQKGRERDR 446



 Score = 45.1 bits (105), Expect = 3e-04
 Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 22/141 (15%)

Query: 21  QGNKKPQNRKEKEEKVEKRSNSDSKENRETKLNGPGENVSEDEAQSSNQRKRANKHKWVP 80
           Q   +    KE+E K ++++  D + NR+T   G  +   E E +    R+ A       
Sbjct: 330 QRETERDREKERERKRKRQTEMDRERNRQTGREGRRQAERERERERERDRQSAR------ 383

Query: 81  LHLDVVRSESQERPGSRNSSRCQPEANKPTHNNRRNDTRSWKRDREKRDDQDDVSSVRSE 140
                   E +ER   R+  R Q E  + T  + R+  R  ++ RE+  D++      SE
Sbjct: 384 --------EREERERDRDRDR-QKERERQTEKD-RDGQRETEKQREREKDRE------SE 427

Query: 141 GGNIRGSFRGRGRGRGRGRGR 161
            G  RG  R + +GR R R R
Sbjct: 428 RGRERGREREKQKGRERDRER 448



 Score = 43.1 bits (100), Expect = 0.001
 Identities = 39/172 (22%), Positives = 74/172 (43%), Gaps = 17/172 (9%)

Query: 21  QGNKKPQNRKEKEEKVEKRSNSDSKENRETKLNGPGENVSEDEAQS--SNQRKRANKHKW 78
           Q + + +  ++++ + E+   +D +  R+T+ N   E   E   Q     +R+R  ++K 
Sbjct: 142 QTDGQRERERQRDAEKERERQTDRERQRQTERNRQKEREREKNRQERRERERQREKENKT 201

Query: 79  VPLHLDVVRSESQERPGSRNSSRCQPEANKPTHNNRRNDTRSWKRDREKRDDQDDVSSVR 138
              H +  R   +ER     + R      K   +  R+  R  +R+REK+ +++  S   
Sbjct: 202 EDRHSERGRERERERETETETER------KRQTDRERDRQRKTEREREKQAERERASERE 255

Query: 139 SEGGNIRGSFRGRGRGRGRGRGRGRGNPRLNFDYSYGYQEHGERTDQPFQTE 190
           +E    R   R R R R R R R +       D     ++   RT++  +TE
Sbjct: 256 TE----RDKERERERDRDRDRDRRQKERERQTD-----RKRQRRTERDRETE 298



 Score = 41.6 bits (96), Expect = 0.003
 Identities = 35/148 (23%), Positives = 59/148 (39%), Gaps = 18/148 (12%)

Query: 20  SQGNKKPQNRKEKEEKVEKRSNSDSKENRETKLNGPGENVSEDEAQSSNQRKRANKHKWV 79
           S+  ++ +  +E E + E++  +D + +R+ K     E  +E E  S  + +R  + +  
Sbjct: 206 SERGRERERERETETETERKRQTDRERDRQRKTEREREKQAERERASERETERDKERE-- 263

Query: 80  PLHLDVVRSESQERPGSRNSSRCQPEANKPTHNNRRNDTRSWKRDREKRDDQDDVSSVRS 139
                      +ER   R+  R Q E  + T   R+  T   +    KR+ Q +    R 
Sbjct: 264 -----------RERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRERERERE 312

Query: 140 EGGNIRGSFRGRGRGRGRGRGRGRGNPR 167
                R   R R R R R R R R   R
Sbjct: 313 -----RNRKRERERERERERERQRETER 335



 Score = 37.7 bits (86), Expect = 0.049
 Identities = 35/137 (25%), Positives = 54/137 (39%), Gaps = 28/137 (20%)

Query: 24  KKPQNRKEKEEKVEKRSNSDSKENRETKLNGPGENVSEDEAQSSNQRKRANKHKWVPLHL 83
           ++ Q  +E++ + EK  N   +  RET+  G      + + Q   +R+R           
Sbjct: 105 RERQTDRERDRQREKERNRQKERERETEREGERGRDRQTDGQRERERQRD---------- 154

Query: 84  DVVRSESQERPGSRNSSRCQPEANKPTHNNR---RNDTRSWKRDREKRDDQDDVSSVRSE 140
                + +ER   R   R Q E N+     R   R + R  +R REK +  +D       
Sbjct: 155 ---AEKERERQTDRERQR-QTERNRQKEREREKNRQERRERERQREKENKTED------- 203

Query: 141 GGNIRGSFRGRGRGRGR 157
               R S RGR R R R
Sbjct: 204 ----RHSERGRERERER 216



 Score = 37.0 bits (84), Expect = 0.084
 Identities = 41/169 (24%), Positives = 61/169 (36%), Gaps = 31/169 (18%)

Query: 22  GNKKPQNRKEKEEKVEKRSNSDSKENRETKLNGPGENVSEDEAQSSNQRKRANKHKWVPL 81
           G ++ + ++E+E+  E     +    RE +     +   + + Q+  QRKR+  +   P 
Sbjct: 410 GQRETEKQREREKDRESERGRERGREREKQKGRERDRERQTDRQAGRQRKRSTLYVNPP- 468

Query: 82  HLDVVRSESQERPGSRNSSRCQPEANKPTHNNRRNDTRSWKRDREKRDDQDDVSSVRSEG 141
                       P +  S   Q + N+PT   R      WK   E        +S R   
Sbjct: 469 ------------PRTARSGVVQSDPNRPTRGIR------WKSSPE----DPKAASTRFPW 506

Query: 142 GNIRGSFRGRGRGRGRGRGRGRGNPRLNFDYSYGYQEHGERTDQPFQTE 190
           G      R     RGR  GR R  PRL      G +  G R    F TE
Sbjct: 507 G------RPAKASRGRVAGRRRWEPRLGEKRGQGGE--GRRPSGGFGTE 547



 Score = 35.0 bits (79), Expect = 0.32
 Identities = 34/147 (23%), Positives = 55/147 (37%), Gaps = 8/147 (5%)

Query: 21  QGNKKPQNRKEKEEKVEKRSNSDSKENRETKLNGPGENVSEDEAQSSNQRKRANKHKWVP 80
           Q +++   +++ E + EK++  +    RET      E   E E +    R R  + K   
Sbjct: 227 QTDRERDRQRKTEREREKQAERERASERET------ERDKERERERDRDRDRDRRQKERE 280

Query: 81  LHLDVVRSESQERPGSRNSSRCQPEANKPTHNNRRNDTRSWKRDREKRDDQDDVSSVRSE 140
              D  R    ER   R + R +    +      RN  R  +R+RE+  ++   +    E
Sbjct: 281 RQTDRKRQRRTER--DRETERKRERQRERERERERNRKRERERERERERERQRETERDRE 338

Query: 141 GGNIRGSFRGRGRGRGRGRGRGRGNPR 167
               R   R     R R R  GR   R
Sbjct: 339 KERERKRKRQTEMDRERNRQTGREGRR 365



 Score = 34.7 bits (78), Expect = 0.42
 Identities = 33/150 (22%), Positives = 53/150 (35%), Gaps = 10/150 (6%)

Query: 24  KKPQNRKEKEEKVEKRSNSDSKENRETKLNGPGENVSEDEAQSSNQRKRAN-------KH 76
           +K Q  +E + K E+R   D    R+       +   E E Q+  +R R         K 
Sbjct: 67  EKRQTERETDRKRERRREKDRHRKRDRHRERQRDREKERERQTDRERDRQREKERNRQKE 126

Query: 77  KWVPLHLDVVRSESQERPGSRNSSRCQPEANKPTHNNRRNDTRSWKRDREKRDDQDDVSS 136
           +      +  R   ++  G R   R +    +      R   R  +R+R+K  +++    
Sbjct: 127 RERETEREGERGRDRQTDGQRERERQRDAEKERERQTDRERQRQTERNRQKEREREKNRQ 186

Query: 137 VRSEGGNIR---GSFRGRGRGRGRGRGRGR 163
            R E    R        R   RGR R R R
Sbjct: 187 ERRERERQREKENKTEDRHSERGRERERER 216



 Score = 34.3 bits (77), Expect = 0.54
 Identities = 46/184 (25%), Positives = 73/184 (39%), Gaps = 20/184 (10%)

Query: 20  SQGNKKPQNR-KEKEEKVEKRS---NSDSKENRETKLNGPGENVSEDEAQSSNQRKRANK 75
           + G+ + +NR KE+E + EKR     +D K  R  + +   +     E Q   +++R  +
Sbjct: 49  ADGDDRERNRQKERERRREKRQTERETDRKRERRREKDRHRKRDRHRERQRDREKERERQ 108

Query: 76  HKWVPLHLDVVRSESQERPGSRNSSRCQPEANKPTHNNRRNDT-----RSWKRDREK-RD 129
                   D  R   +E+  +R   R + E  +     R   T     R  +RD EK R+
Sbjct: 109 -------TDRERDRQREKERNRQKER-ERETEREGERGRDRQTDGQRERERQRDAEKERE 160

Query: 130 DQDDVSSVRSEGGNIRGSFRGRGRGRGRGRGRGRGNPRLNFDYSYGYQEHGERTDQPFQT 189
            Q D    R    N R   R R + R   R R R   + N      + E G   ++  +T
Sbjct: 161 RQTDRERQRQTERN-RQKEREREKNRQERRERERQREKEN-KTEDRHSERGRERERERET 218

Query: 190 ELNT 193
           E  T
Sbjct: 219 ETET 222



 Score = 32.0 bits (71), Expect = 2.7
 Identities = 38/170 (22%), Positives = 68/170 (40%), Gaps = 14/170 (8%)

Query: 24  KKPQNRKEKEEKVEKRSNSDSKENRETKLNGPGEN-----VSEDEAQSSNQR-KRANKHK 77
           +K +  +EK+ + E+ S  +++ ++E +     +        E E Q+  +R +R  + +
Sbjct: 236 RKTEREREKQAERERASERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERDR 295

Query: 78  WVPLHLDVVRSESQERPGSRNSSR-----CQPEANKPTHNNRRNDTRSWKRDREKRDDQD 132
                 +  R   +ER  +R   R      + E  + T  +R  + R  KR R+   D++
Sbjct: 296 ETERKRERQRERERERERNRKRERERERERERERQRETERDREKE-RERKRKRQTEMDRE 354

Query: 133 DVSSVRSEGGNIRGSFRGRGRGRGRGRGRGRGNPRLNFDYSYGYQEHGER 182
                  EG   R + R R R R R R   R       D     Q+  ER
Sbjct: 355 RNRQTGREGR--RQAERERERERERDRQSAREREERERDRDRDRQKERER 402



 Score = 31.2 bits (69), Expect = 4.6
 Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 5/89 (5%)

Query: 79  VPLHLDVVRSESQERPGSRNSSRCQPEANKPTHNNRRNDTRSWKRDREKRDDQDDVSSVR 138
           +PL     R  SQE P  R   +   +A+    +  RN  +  +R REKR  + +    R
Sbjct: 22  IPLDFSRRRPGSQESPRRRGLGQAHKDADGD--DRERNRQKERERRREKRQTERETDRKR 79

Query: 139 SEGGNIRGSFRGRGRGRGRGRGRGRGNPR 167
                 R   R R R R R R R R   R
Sbjct: 80  ERR---REKDRHRKRDRHRERQRDREKER 105


>gi|109809739 La ribonucleoprotein domain family, member 7 [Homo
           sapiens]
          Length = 582

 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 24/65 (36%), Positives = 43/65 (66%), Gaps = 2/65 (3%)

Query: 219 IKRQIEYYFSVENLERDFFLRGKMDEQ--GFLPISLIAGFQRVQALTTNLNLILEALKDS 276
           I +Q++++F   NL +D FLR ++++   G++ ISL+  F +++ LTT+  LI  AL+ S
Sbjct: 38  IAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSS 97

Query: 277 TEVEI 281
             VE+
Sbjct: 98  AVVEL 102


>gi|109809741 La ribonucleoprotein domain family, member 7 [Homo
           sapiens]
          Length = 582

 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 24/65 (36%), Positives = 43/65 (66%), Gaps = 2/65 (3%)

Query: 219 IKRQIEYYFSVENLERDFFLRGKMDEQ--GFLPISLIAGFQRVQALTTNLNLILEALKDS 276
           I +Q++++F   NL +D FLR ++++   G++ ISL+  F +++ LTT+  LI  AL+ S
Sbjct: 38  IAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSS 97

Query: 277 TEVEI 281
             VE+
Sbjct: 98  AVVEL 102


>gi|213385278 TNF receptor-associated factor 3 interacting protein 1
           isoform 2 [Homo sapiens]
          Length = 625

 Score = 47.4 bits (111), Expect = 6e-05
 Identities = 44/190 (23%), Positives = 85/190 (44%), Gaps = 16/190 (8%)

Query: 19  LSQGNKKPQNRKEKEEKVEKRSNSDSKENRETKLNGPGENVSEDEAQSSNQRKRANKHKW 78
           L+  +++  N+  +EE+     N++ + + E K         E       ++K   K   
Sbjct: 142 LTSRSQELDNKNVREEESRVHKNTEDRGDAEIK---------ERSTSRDRKQKEELKEDR 192

Query: 79  VPLHLDVVRSESQERPGSRN--SSRCQPEANKPTHNNRRNDTRSWKRDREKRDDQDDVSS 136
            P   D  + +++E  G+R+    R + +A     N R+ D  + +RDR+    ++  + 
Sbjct: 193 KPREKDKDKEKAKENGGNRHREGERERAKARARPDNERQKDRGNRERDRDSERKKE--TE 250

Query: 137 VRSEGGNIRGSFRGRGRGRGRGRGRGRGNPRL-NFDYSYGY-QEHGERTDQPFQTELNT- 193
            +SEGG  +   R R R R R +G+ R   R+ N ++S+   +E     D+P +   ++ 
Sbjct: 251 RKSEGGKEKERLRDRDRERDRDKGKDRDRRRVKNGEHSWDLDREKNREHDKPEKKSASSG 310

Query: 194 SMMYYYDDGT 203
            M     DGT
Sbjct: 311 EMSKKLSDGT 320


>gi|20070262 TNF receptor-associated factor 3 interacting protein 1
           isoform 1 [Homo sapiens]
          Length = 691

 Score = 47.4 bits (111), Expect = 6e-05
 Identities = 44/190 (23%), Positives = 85/190 (44%), Gaps = 16/190 (8%)

Query: 19  LSQGNKKPQNRKEKEEKVEKRSNSDSKENRETKLNGPGENVSEDEAQSSNQRKRANKHKW 78
           L+  +++  N+  +EE+     N++ + + E K         E       ++K   K   
Sbjct: 142 LTSRSQELDNKNVREEESRVHKNTEDRGDAEIK---------ERSTSRDRKQKEELKEDR 192

Query: 79  VPLHLDVVRSESQERPGSRN--SSRCQPEANKPTHNNRRNDTRSWKRDREKRDDQDDVSS 136
            P   D  + +++E  G+R+    R + +A     N R+ D  + +RDR+    ++  + 
Sbjct: 193 KPREKDKDKEKAKENGGNRHREGERERAKARARPDNERQKDRGNRERDRDSERKKE--TE 250

Query: 137 VRSEGGNIRGSFRGRGRGRGRGRGRGRGNPRL-NFDYSYGY-QEHGERTDQPFQTELNT- 193
            +SEGG  +   R R R R R +G+ R   R+ N ++S+   +E     D+P +   ++ 
Sbjct: 251 RKSEGGKEKERLRDRDRERDRDKGKDRDRRRVKNGEHSWDLDREKNREHDKPEKKSASSG 310

Query: 194 SMMYYYDDGT 203
            M     DGT
Sbjct: 311 EMSKKLSDGT 320


>gi|169160654 PREDICTED: similar to small nuclear ribonucleoprotein
           D1 polypeptide 16kDa [Homo sapiens]
          Length = 119

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 23/39 (58%), Positives = 26/39 (66%), Gaps = 2/39 (5%)

Query: 129 DDQDDVSSVRSEGGNIRGSFRGRGRGRGRGRGRGRGNPR 167
           D +  V S + E   + G  RGRGRGRGRGRGRGRG PR
Sbjct: 82  DVEPKVKSKKREA--VAGRGRGRGRGRGRGRGRGRGGPR 118


>gi|5902102 small nuclear ribonucleoprotein D1 polypeptide 16kDa
           [Homo sapiens]
          Length = 119

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 23/39 (58%), Positives = 26/39 (66%), Gaps = 2/39 (5%)

Query: 129 DDQDDVSSVRSEGGNIRGSFRGRGRGRGRGRGRGRGNPR 167
           D +  V S + E   + G  RGRGRGRGRGRGRGRG PR
Sbjct: 82  DVEPKVKSKKREA--VAGRGRGRGRGRGRGRGRGRGGPR 118


>gi|7710145 methyl-CpG binding domain protein 2 testis-specific
           isoform [Homo sapiens]
          Length = 302

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 27/62 (43%), Positives = 29/62 (46%), Gaps = 7/62 (11%)

Query: 106 ANKPTHNNRRNDTRSWKRDREKRDDQDDVSSVRSEGGNIRGSFRGRGRGRGRGRGRGRGN 165
           A  P    RR   R   R R +             GG + G  RGRGRGRGRGRGRGRG 
Sbjct: 42  APSPVSGVRREGARGGGRGRGRWKQA-------GRGGGVCGRGRGRGRGRGRGRGRGRGR 94

Query: 166 PR 167
            R
Sbjct: 95  GR 96


>gi|4505117 methyl-CpG binding domain protein 2 isoform 1 [Homo
           sapiens]
          Length = 411

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 27/62 (43%), Positives = 29/62 (46%), Gaps = 7/62 (11%)

Query: 106 ANKPTHNNRRNDTRSWKRDREKRDDQDDVSSVRSEGGNIRGSFRGRGRGRGRGRGRGRGN 165
           A  P    RR   R   R R +             GG + G  RGRGRGRGRGRGRGRG 
Sbjct: 42  APSPVSGVRREGARGGGRGRGRWKQA-------GRGGGVCGRGRGRGRGRGRGRGRGRGR 94

Query: 166 PR 167
            R
Sbjct: 95  GR 96


>gi|29568103 U1 small nuclear ribonucleoprotein 70 kDa [Homo
           sapiens]
          Length = 437

 Score = 43.9 bits (102), Expect = 7e-04
 Identities = 46/168 (27%), Positives = 69/168 (41%), Gaps = 12/168 (7%)

Query: 23  NKKPQNRKEKEEKVEKRSNSDSKENRETKLNGPGENVSEDEAQSSNQRKRANKHKWVPLH 82
           +K+ + R+ +     +RS S  KE R        +   + + +SS  R+RA + +     
Sbjct: 249 DKERERRRSRSRDRRRRSRSRDKEERRRSRERSKDKDRDRKRRSSRSRERARRERERKEE 308

Query: 83  L-----DVVR-SESQERPGSRNS-SRCQPEA-NKPTHNNRRNDT---RSWKRDREKRDDQ 131
           L     D+   SE+ + P          P+  + P    R  D    RS + +RE+R D+
Sbjct: 309 LRGGGGDMAEPSEAGDAPPDDGPPGELGPDGPDGPEEKGRDRDRERRRSHRSERERRRDR 368

Query: 132 D-DVSSVRSEGGNIRGSFRGRGRGRGRGRGRGRGNPRLNFDYSYGYQE 178
           D D    R      RGS RGR   RG G G+  G   L  D    Y E
Sbjct: 369 DRDRDRDREHKRGERGSERGRDEARGGGGGQDNGLEGLGNDSRDMYME 416


>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
          Length = 653

 Score = 43.9 bits (102), Expect = 7e-04
 Identities = 42/153 (27%), Positives = 60/153 (39%), Gaps = 22/153 (14%)

Query: 16  QSVLSQGNKKPQNRKEKEEKVEKRSNSDSKENRETKLNGPGENVSEDEAQSSNQRKRANK 75
           +S  S G+  P  +K+K  K  +R  SDS   R+ +              S  +RK  NK
Sbjct: 188 ESECSCGSSSPLRKKKKSVKKHRRDRSDSGSRRKRR---------HRSRSSKCKRKEKNK 238

Query: 76  HKWVPLHLDVVRSESQERPGSRNSSRCQPEANKPTHNNRRNDTRSWKRDREK-RDDQDDV 134
            K  P           E PG R+       ++ P+ ++  +D+RS  R   K RD+    
Sbjct: 239 EKKRP---------HTESPGRRSHRHSSGSSHSPSLSSHYSDSRSPSRLSPKHRDEGRKT 289

Query: 135 SSVRSEGGNIRGSFRGRGRG---RGRGRGRGRG 164
            S RS G        G G G   R  G G+  G
Sbjct: 290 GSQRSSGSRSPSPSGGSGWGSPQRNGGSGQRSG 322


>gi|38488727 arginine/serine-rich coiled-coil 1 [Homo sapiens]
          Length = 334

 Score = 43.1 bits (100), Expect = 0.001
 Identities = 34/107 (31%), Positives = 46/107 (42%), Gaps = 17/107 (15%)

Query: 56  GENVSEDEAQSSNQRKRANKHKWVPLHLDVVRSESQERPGSRNSSRCQPEANKPTHNNRR 115
           G   S+ E +S ++RK+ ++           RS S     SR  SR      K      R
Sbjct: 2   GRRSSDTEEESRSKRKKKHRR----------RSSSSSSSDSRTYSR------KKGGRKSR 45

Query: 116 NDTRSWKRDREKRD-DQDDVSSVRSEGGNIRGSFRGRGRGRGRGRGR 161
           + +RSW RD + R    D     RS   +  GS R R R R RGRG+
Sbjct: 46  SKSRSWSRDLQPRSHSYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGK 92



 Score = 33.1 bits (74), Expect = 1.2
 Identities = 27/125 (21%), Positives = 53/125 (42%), Gaps = 23/125 (18%)

Query: 28  NRKEKEEKVEKRSNSDSKENRETKLNGPGENVSEDEAQSSNQRKRANKHKWVPLHLDVVR 87
           +R+ +       S    ++   ++  G G++     ++S ++ +R+             R
Sbjct: 63  DRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRS-------------R 109

Query: 88  SESQERPGSRNSSRCQPEANKPTHNNRRNDTRSWKRDREKRDDQDDVSS-------VRSE 140
           S  + R  SR+S R    +++ T +  R+  R   RD+EKR+ + D           R E
Sbjct: 110 SRPRLRSHSRSSER---SSHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGE 166

Query: 141 GGNIR 145
            GNI+
Sbjct: 167 SGNIK 171


>gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens]
          Length = 320

 Score = 43.1 bits (100), Expect = 0.001
 Identities = 45/186 (24%), Positives = 76/186 (40%), Gaps = 18/186 (9%)

Query: 14  GFQSVLSQGNKKPQNRKEKEEK--VEKRSNSDSKENRETKLNGPGENVSEDEAQSSNQRK 71
           G  S+L +   K    +E++E   + K    + ++  +  L+    + SE+E  +  +  
Sbjct: 140 GPASILKEVEDKESEGEEEDEDEDLSKYKLDEDEDEDDADLSKYNLDASEEEDSNKKKSN 199

Query: 72  RANKHKWVPLHLDVVRSESQERPGSRNSSRCQPEANKPTHNNRRNDTRSWKRDREKRDDQ 131
           R ++ K    H     S S  R  S +SSR +  +   + ++ ++ +RS  R+R +    
Sbjct: 200 RRSRSKSRSSH-----SRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGS 254

Query: 132 DDVSSVRSEGGNI---RGSF--------RGRGRGRGRGRGRGRGNPRLNFDYSYGYQEHG 180
              SS RS  G+    + S+        R R R R R    G    R     S   Q  G
Sbjct: 255 KSRSSSRSHRGSSSPRKRSYSSSSSSPERNRKRSRSRSSSSGDRKKRRTRSRSPESQVIG 314

Query: 181 ERTDQP 186
           E T QP
Sbjct: 315 ENTKQP 320


>gi|40068059 CBF1 interacting corepressor [Homo sapiens]
          Length = 450

 Score = 42.7 bits (99), Expect = 0.002
 Identities = 52/207 (25%), Positives = 81/207 (39%), Gaps = 28/207 (13%)

Query: 24  KKPQNRKEKE-------EKVEKRSNSDSKENRETKLNGPGENVSEDEAQSSN---QRKRA 73
           KK ++RK+K+        K  K S+S S  +  +      E+ SE E+ +     QRK+ 
Sbjct: 235 KKKKDRKKKKFQKSRSKHKKHKSSSSSSSSSSSSSSTETSESSSESESNNKEKKIQRKKR 294

Query: 74  NKHKWVPLHLDVVRSESQERPGSRNSSRCQPEANKPTHNNR---RNDTRSWKRDREKRD- 129
            K+K    +     S+S+E+   ++  R   E    +H+NR   +   R  K +  + D 
Sbjct: 295 KKNKCSGHN----NSDSEEK--DKSKKRKLHEELSSSHHNREKAKEKPRFLKHESSREDS 348

Query: 130 -----DQDDVSSVRSEGGNIRGSFRGRGRGRGRGRGRGRGNPRLNFDYSYGYQE---HGE 181
                D D  S         RGS R  G  R  GR       R     SY  +E     +
Sbjct: 349 KWSHSDSDKKSRTHKHSPEKRGSERKEGSSRSHGREERSRRSRSRSPGSYKQRETRKRAQ 408

Query: 182 RTDQPFQTELNTSMMYYYDDGTGVQVY 208
           R     Q+  N S  +  D   G ++Y
Sbjct: 409 RNPGEEQSRRNDSRSHGTDLYRGEKMY 435



 Score = 42.7 bits (99), Expect = 0.002
 Identities = 49/190 (25%), Positives = 75/190 (39%), Gaps = 40/190 (21%)

Query: 8   SELVNTGFQSVLSQGNKKPQNRKEKEEKVEKRSNSDSKENRETKLNGPGENVSEDEAQSS 67
           +E   +  +S  +   KK Q +K K+ K    +NSDS+E  ++K     +    +E  SS
Sbjct: 271 TETSESSSESESNNKEKKIQRKKRKKNKCSGHNNSDSEEKDKSK-----KRKLHEELSSS 325

Query: 68  NQRKRANKHKWVPLHLDVVRSESQERPGSRNSSRCQPEANKPTHNNRRNDTRSWKRDREK 127
           +  +   K K  P  L               SSR   E +K +H++    +R+ K   EK
Sbjct: 326 HHNREKAKEK--PRFL------------KHESSR---EDSKWSHSDSDKKSRTHKHSPEK 368

Query: 128 RDDQDDVSSVRSEGGNIR---------GSFRGRGRGRGRGRGRGRGNPRLNFDYSYG--- 175
           R  +    S RS G   R         GS++ R   +   R  G    R N   S+G   
Sbjct: 369 RGSERKEGSSRSHGREERSRRSRSRSPGSYKQRETRKRAQRNPGEEQSRRNDSRSHGTDL 428

Query: 176 ------YQEH 179
                 Y+EH
Sbjct: 429 YRGEKMYREH 438


>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
          Length = 843

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 35/148 (23%), Positives = 60/148 (40%), Gaps = 10/148 (6%)

Query: 21  QGNKKPQNRK-EKEEKVEKRSNSDSKENRETKLNGPGENVSEDEAQSSNQRKRANKHKWV 79
           +G K+ + ++ EKE +  +R     +E RE +     E   E E +   +R+R       
Sbjct: 295 KGKKEKERQEIEKERRERERERERERERREREREREREREREKEKERERERERDR----- 349

Query: 80  PLHLDVVRSESQERPGSRNSSRCQPEANKPTHNNRRNDTRSWKRDREKRDDQDDVSSVRS 139
               D  R++ ++R   R   R +        N  R+ +R   RDRE+  +++       
Sbjct: 350 ----DRDRTKERDRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERERERERERER 405

Query: 140 EGGNIRGSFRGRGRGRGRGRGRGRGNPR 167
           E    R   R R R R R R + +   R
Sbjct: 406 EREREREREREREREREREREKDKKRDR 433



 Score = 33.9 bits (76), Expect = 0.71
 Identities = 25/110 (22%), Positives = 48/110 (43%), Gaps = 2/110 (1%)

Query: 24  KKPQNRKEKEEKVEKRSNSDSKENRETKLNGPGENVSE-DEAQSSNQRKRANKHKWVPLH 82
           ++ +  KEKE + E+  + D    +E   +   E   + D  +SS++ K  ++ +     
Sbjct: 331 REREREKEKERERERERDRDRDRTKERDRDRDRERDRDRDRERSSDRNKDRSRSREKSRD 390

Query: 83  LDVVRSESQERPGSRNSSRCQPEANKPTHNNRRNDTRSWKRDREKRDDQD 132
            +  R   +ER   R   R +    +      R   +  KRDRE+ D++D
Sbjct: 391 REREREREREREREREREREREREREREREREREREKDKKRDREE-DEED 439



 Score = 32.7 bits (73), Expect = 1.6
 Identities = 28/138 (20%), Positives = 52/138 (37%), Gaps = 15/138 (10%)

Query: 30  KEKEEKVEKRSNSDSKENRETKLNGPGENVSEDEAQSSNQRKRANKHKWVPLHLDVVRSE 89
           ++  +K+E+      KE +E         + ++  +   +R+R  + +      +  R  
Sbjct: 285 RDTHKKLEEEKGKKEKERQE---------IEKERRERERERERERERRERERERERERER 335

Query: 90  SQERPGSRNSSRCQPEANKPTHNNRRNDTRSWKRDREKRDDQDDVSSVRSEGGNIRGSFR 149
            +E+   R   R +        +  R+  R   RDRE+  D++       +    R   R
Sbjct: 336 EKEKERERERERDRDRDRTKERDRDRDRERDRDRDRERSSDRN------KDRSRSREKSR 389

Query: 150 GRGRGRGRGRGRGRGNPR 167
            R R R R R R R   R
Sbjct: 390 DRERERERERERERERER 407


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.312    0.131    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,398,470
Number of Sequences: 37866
Number of extensions: 2218816
Number of successful extensions: 12660
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 309
Number of HSP's that attempted gapping in prelim test: 10651
Number of HSP's gapped (non-prelim): 1832
length of query: 914
length of database: 18,247,518
effective HSP length: 111
effective length of query: 803
effective length of database: 14,044,392
effective search space: 11277646776
effective search space used: 11277646776
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.