Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ST3GAL3 Sequence: fasta or formatted (413aa) NCBI GI: 28373086
Description:

sialyltransferase 6 isoform i

Referenced in:

Protein Glycosylation

Other entries for this name:
alt prot [444aa] sialyltransferase 6 isoform a
alt prot [390aa] sialyltransferase 6 isoform b
alt prot [170aa] sialyltransferase 6 isoform c
alt prot [277aa] sialyltransferase 6 isoform d
alt prot [155aa] sialyltransferase 6 isoform e
alt prot [429aa] sialyltransferase 6 isoform f
alt prot [359aa] sialyltransferase 6 isoform g
alt prot [139aa] sialyltransferase 6 isoform h
alt prot [375aa] sialyltransferase 6 isoform j
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         33           2
 C cysteine            1.7          7           1
 D aspartate           4.6         19           2
 E glutamate           5.6         23           2
 F phenylalanine       5.8         24           1
 G glycine             6.8         28           2
 H histidine           1.2          5           1
 I isoleucine          5.3         22           2
 K lysine              6.8         28           2
 L leucine            13.1         54           3
 M methionine          2.2          9           1
 N asparagine          3.1         13           2
 P proline             6.1         25           2
 Q glutamine           1.7          7           1
 R arginine            6.1         25           2
 S serine              6.5         27           2
 T threonine           4.1         17           2
 V valine              6.1         25           2
 W tryptophan          1.7          7           1
 Y tyrosine            3.6         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sialyltransferase 6 isoform i 
ST3GAL3               0.986   sialyltransferase 6 isoform f 
ST3GAL3               0.979   sialyltransferase 6 isoform a 
ST3GAL3               0.812   sialyltransferase 6 isoform b 
ST3GAL3               0.808   sialyltransferase 6 isoform j 
ST3GAL3               0.749   sialyltransferase 6 isoform g 
ST3GAL3               0.495   sialyltransferase 6 isoform d 
ST3GAL5               0.255   ST3 beta-galactoside alpha-2,3-sialyltransferase 5 ...
ST3GAL5               0.255   ST3 beta-galactoside alpha-2,3-sialyltransferase 5 ...
ST3GAL4               0.214   ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [H...
ST3GAL3               0.209   sialyltransferase 6 isoform c 
ST3GAL3               0.207   sialyltransferase 6 isoform e 
ST3GAL6               0.207   alpha2,3-sialyltransferase VI 
ST3GAL3               0.147   sialyltransferase 6 isoform h 
ST3GAL1               0.111   ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [...
ST3GAL1               0.111   ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [H...
ST3GAL2               0.098   ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [H...
ST6GALNAC1            0.089   sialyltransferase 7A 
ST6GALNAC2            0.068   sialyltransferase 7B 
ST6GAL2               0.054   ST6 beta-galactosamide alpha-2,6-sialyltranferase 2...
ST6GAL2               0.054   ST6 beta-galactosamide alpha-2,6-sialyltranferase 2 ...
ST6GAL2               0.050   ST6 beta-galactosamide alpha-2,6-sialyltranferase 2...
ST8SIA2               0.048   ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransf...
ST6GALNAC4            0.043   sialyltransferase 7D isoform a 
ST6GALNAC5            0.043   sialyltransferase 7E 
ST6GAL1               0.042   ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 i...
ST6GAL1               0.042   ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 ...
ST8SIA4               0.041   ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransf...
ST8SIA3               0.037   ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltran...
ST8SIA1               0.036   alpha-2,8-sialyltransferase 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press