Guide to the Human Genome
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Name: ST3GAL3 Sequence: fasta or formatted (155aa) NCBI GI: 28373076
Description:

sialyltransferase 6 isoform e

Referenced in:

Protein Glycosylation

Other entries for this name:
alt prot [444aa] sialyltransferase 6 isoform a
alt prot [390aa] sialyltransferase 6 isoform b
alt prot [170aa] sialyltransferase 6 isoform c
alt prot [277aa] sialyltransferase 6 isoform d
alt prot [429aa] sialyltransferase 6 isoform f
alt prot [359aa] sialyltransferase 6 isoform g
alt prot [139aa] sialyltransferase 6 isoform h
alt prot [413aa] sialyltransferase 6 isoform i
alt prot [375aa] sialyltransferase 6 isoform j
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.3         16           1
 C cysteine            1.3          2           1
 D aspartate           4.5          7           2
 E glutamate           5.8          9           2
 F phenylalanine       7.7         12           1
 G glycine             6.5         10           1
 H histidine           1.9          3           2
 I isoleucine          1.9          3           1
 K lysine              4.5          7           1
 L leucine            15.5         24           3
 M methionine          1.9          3           1
 N asparagine          2.6          4           1
 P proline             5.2          8           2
 Q glutamine           2.6          4           1
 R arginine            5.8          9           1
 S serine              9.0         14           2
 T threonine           1.9          3           1
 V valine              5.2          8           2
 W tryptophan          1.9          3           1
 Y tyrosine            3.9          6           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sialyltransferase 6 isoform e 
ST3GAL3               0.959   sialyltransferase 6 isoform c 
ST3GAL3               0.855   sialyltransferase 6 isoform h 
ST3GAL3               0.845   sialyltransferase 6 isoform d 
ST3GAL3               0.845   sialyltransferase 6 isoform j 
ST3GAL3               0.803   sialyltransferase 6 isoform b 
ST3GAL3               0.738   sialyltransferase 6 isoform f 
ST3GAL3               0.700   sialyltransferase 6 isoform g 
ST3GAL3               0.697   sialyltransferase 6 isoform a 
ST3GAL3               0.576   sialyltransferase 6 isoform i 
MUC5AC                0.017   mucin 5AC 
LOC100132635          0.017   PREDICTED: similar to mucin 5, partial 
PIGU                  0.014   phosphatidylinositol glycan anchor biosynthesis, cla...
SPAG1                 0.010   sperm associated antigen 1 
SPAG1                 0.010   sperm associated antigen 1 
ARID3A                0.007   AT rich interactive domain 3A (BRIGHT- like) protein ...
SLC6A4                0.007   solute carrier family 6 member 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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