Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ST6GALNAC2 Sequence: fasta or formatted (374aa) NCBI GI: 192448440
Description:

sialyltransferase 7B

Referenced in:

Protein Glycosylation

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         30           2
 C cysteine            1.3          5           1
 D aspartate           4.8         18           1
 E glutamate           2.1          8           1
 F phenylalanine       7.0         26           2
 G glycine             8.3         31           2
 H histidine           3.7         14           1
 I isoleucine          4.3         16           1
 K lysine              4.5         17           1
 L leucine            13.1         49           5
 M methionine          1.6          6           1
 N asparagine          3.5         13           1
 P proline             5.6         21           2
 Q glutamine           3.5         13           1
 R arginine            5.3         20           1
 S serine              8.0         30           1
 T threonine           4.8         18           2
 V valine              4.0         15           2
 W tryptophan          2.1          8           1
 Y tyrosine            4.3         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sialyltransferase 7B 
ST6GALNAC1            0.303   sialyltransferase 7A 
ST3GAL2               0.096   ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [H...
ST3GAL1               0.089   ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [...
ST3GAL1               0.089   ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [H...
ST3GAL3               0.073   sialyltransferase 6 isoform i 
ST3GAL3               0.073   sialyltransferase 6 isoform g 
ST3GAL3               0.073   sialyltransferase 6 isoform f 
ST3GAL3               0.073   sialyltransferase 6 isoform b 
ST3GAL3               0.073   sialyltransferase 6 isoform a 
ST3GAL3               0.073   sialyltransferase 6 isoform j 
ST3GAL4               0.064   ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [H...
ST8SIA3               0.061   ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltran...
ST8SIA5               0.061   ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltrans...
ST3GAL5               0.059   ST3 beta-galactoside alpha-2,3-sialyltransferase 5 ...
ST3GAL5               0.059   ST3 beta-galactoside alpha-2,3-sialyltransferase 5 ...
ST8SIA6               0.059   ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltrans...
ST3GAL3               0.056   sialyltransferase 6 isoform d 
ST8SIA4               0.056   ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransf...
ST3GAL6               0.051   alpha2,3-sialyltransferase VI 
ST6GAL1               0.048   ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 i...
ST6GAL1               0.048   ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 ...
ST8SIA2               0.047   ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransf...
ST8SIA1               0.040   alpha-2,8-sialyltransferase 1 
ST6GAL2               0.039   ST6 beta-galactosamide alpha-2,6-sialyltranferase 2...
ST6GAL2               0.039   ST6 beta-galactosamide alpha-2,6-sialyltranferase 2 ...
ST6GALNAC5            0.036   sialyltransferase 7E 
ST6GALNAC4            0.033   sialyltransferase 7D isoform a 
ST6GAL2               0.032   ST6 beta-galactosamide alpha-2,6-sialyltranferase 2...
ST6GALNAC3            0.027   sialyltransferase 7C isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press