LOC389722 23501

Name: LOC389722	Sequence: fasta or formatted (140aa)		NCBI GI: 239758135
Description: PREDICTED: similar to cell recognition molecule CASPR3		Referenced in: Neurons
Other entries for this name: alt prot [1288aa] PREDICTED: hypothetical protein LOC389722 isoform 1 alt prot [1207aa] PREDICTED: hypothetical protein LOC389722 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.3 6 1 C cysteine 0.0 0 0 D aspartate 3.6 5 1 E glutamate 6.4 9 2 F phenylalanine 5.0 7 1 G glycine 3.6 5 1 H histidine 3.6 5 1 I isoleucine 4.3 6 1 K lysine 5.7 8 2 L leucine 12.1 17 3 M methionine 2.9 4 1 N asparagine 5.7 8 2 P proline 1.4 2 1 Q glutamine 5.0 7 1 R arginine 5.0 7 1 S serine 11.4 16 3 T threonine 7.1 10 2 V valine 8.6 12 2 W tryptophan 0.0 0 0 Y tyrosine 4.3 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to cell recognition molecule CAS... LOC643827 0.996 PREDICTED: similar to cell recognition molecule CAS... FLJ37512 0.984 PREDICTED: novel protein similar to contactin assoc... CNTNAP3 0.980 cell recognition molecule CASPR3 LOC389722 0.968 PREDICTED: hypothetical protein LOC389722 isoform 2... LOC389722 0.968 PREDICTED: hypothetical protein LOC389722 isoform 1... CNTNAP4 0.677 cell recognition protein CASPR4 isoform 2 CNTNAP4 0.677 cell recognition protein CASPR4 isoform 1 LOC100294401 0.488 PREDICTED: similar to cell recognition molecule Cas... CNTNAP5 0.323 contactin associated protein-like 5 CNTNAP2 0.282 cell recognition molecule Caspr2 precursor CNTNAP1 0.169 contactin associated protein 1 precursor NRXN2 0.040 neurexin 2 isoform alpha-1 precursor NRXN2 0.040 neurexin 2 isoform alpha-2 precursor CRB1 0.032 crumbs homolog 1 precursor LAMA2 0.028 laminin alpha 2 subunit isoform b precursor LAMA2 0.028 laminin alpha 2 subunit isoform a precursor FAT1 0.028 FAT tumor suppressor 1 precursor ECT2L 0.012 epithelial cell transforming sequence 2 oncogene-li... TRIP11 0.008 thyroid hormone receptor interactor 11 DSG2 0.008 desmoglein 2 preproprotein SLIT1 0.008 slit homolog 1 CCDC55 0.008 coiled-coil domain containing 55 isoform 1 DTNBP1 0.004 dystrobrevin binding protein 1 isoform b TRPS1 0.004 zinc finger transcription factor TRPS1 KIAA1529 0.004 hypothetical protein LOC57653 EIF2A 0.004 eukaryotic translation initiation factor 2A Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.