Guide to the Human Genome
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Name: DTNBP1 Sequence: fasta or formatted (303aa) NCBI GI: 34304368
Description:

dystrobrevin binding protein 1 isoform b

Referenced in:

Lysosomes and Related Organelles

Other entries for this name:
alt prot [351aa] dystrobrevin binding protein 1 isoform a
alt prot [270aa] dystrobrevin binding protein 1 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         22           2
 C cysteine            1.7          5           1
 D aspartate           5.0         15           1
 E glutamate          12.5         38           2
 F phenylalanine       2.6          8           2
 G glycine             3.3         10           2
 H histidine           3.0          9           1
 I isoleucine          1.3          4           1
 K lysine              7.3         22           3
 L leucine            13.9         42           2
 M methionine          4.0         12           1
 N asparagine          3.0          9           2
 P proline             3.3         10           2
 Q glutamine           6.9         21           2
 R arginine            5.3         16           2
 S serine              7.3         22           2
 T threonine           4.3         13           1
 V valine              5.3         16           2
 W tryptophan          0.7          2           1
 Y tyrosine            2.3          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dystrobrevin binding protein 1 isoform b 
DTNBP1                0.882   dystrobrevin binding protein 1 isoform a 
DTNBP1                0.611   dystrobrevin binding protein 1 isoform c 
DBNDD2                0.096   SCF apoptosis response protein 1 isoform a 
DBNDD2                0.096   SCF apoptosis response protein 1 isoform a 
DBNDD2                0.096   SCF apoptosis response protein 1 isoform a 
DBNDD2                0.094   SCF apoptosis response protein 1 isoform b 
DBNDD2                0.094   SCF apoptosis response protein 1 isoform b 
DBNDD2                0.094   SCF apoptosis response protein 1 isoform b 
DBNDD1                0.056   dysbindin (dystrobrevin binding protein 1) domain c...
DBNDD1                0.056   dysbindin (dystrobrevin binding protein 1) domain c...
ERC2                  0.047   cytomatrix protein p110 
MYH9                  0.042   myosin, heavy polypeptide 9, non-muscle 
IVL                   0.042   involucrin 
ERC1                  0.040   RAB6-interacting protein 2 isoform epsilon 
ERC1                  0.040   RAB6-interacting protein 2 isoform delta 
MYH15                 0.038   myosin, heavy polypeptide 15 
C6orf97               0.033   hypothetical protein LOC80129 
ANKRD18A              0.033   PREDICTED: ankyrin repeat domain 18A 
ANKRD18A              0.033   PREDICTED: ankyrin repeat domain 18A 
ANKRD18A              0.033   PREDICTED: ankyrin repeat domain 18A 
GOLGB1                0.033   golgi autoantigen, golgin subfamily b, macrogolgin ...
TPR                   0.033   nuclear pore complex-associated protein TPR 
MYH10                 0.033   myosin, heavy polypeptide 10, non-muscle 
CIT                   0.033   citron 
GOLGA3                0.033   Golgi autoantigen, golgin subfamily a, 3 
MYH11                 0.030   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.030   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.030   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.030   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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