Guide to the Human Genome
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Name: TMEM25 Sequence: fasta or formatted (218aa) NCBI GI: 221139834
Description:

transmembrane protein 25 isoform 3

Not currently referenced in the text

Other entries for this name:
alt prot {322aa} transmembrane protein 25 isoform 2
alt prot {351aa} transmembrane protein 25 isoform 4
alt prot {306aa} transmembrane protein 25 isoform 5
alt prot {322aa} transmembrane protein 25 isoform 2
alt prot {366aa} transmembrane protein 25 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         18           2
 C cysteine            0.0          0           0
 D aspartate           5.0         11           1
 E glutamate           2.8          6           1
 F phenylalanine       1.4          3           1
 G glycine             5.0         11           2
 H histidine           1.8          4           1
 I isoleucine          2.8          6           1
 K lysine              1.8          4           1
 L leucine            16.1         35           4
 M methionine          1.4          3           1
 N asparagine          7.3         16           2
 P proline            10.1         22           2
 Q glutamine           5.0         11           1
 R arginine            5.0         11           1
 S serine              9.6         21           2
 T threonine           4.6         10           1
 V valine              8.7         19           2
 W tryptophan          1.4          3           1
 Y tyrosine            1.8          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 25 isoform 3 
TMEM25                0.890   transmembrane protein 25 isoform 2 
TMEM25                0.890   transmembrane protein 25 isoform 2 
TMEM25                0.838   transmembrane protein 25 isoform 1 
TMEM25                0.765   transmembrane protein 25 isoform 5 
TMEM25                0.728   transmembrane protein 25 isoform 4 
SPEG                  0.020   SPEG complex locus 
AGER                  0.020   advanced glycosylation end product-specific receptor...
BCL9                  0.017   B-cell CLL/lymphoma 9 
FBXO30                0.015   F-box only protein 30 
ROR2                  0.012   receptor tyrosine kinase-like orphan receptor 2 prec...
HMCN2                 0.012   PREDICTED: hemicentin 2 
HMCN2                 0.012   PREDICTED: hemicentin 2 
HMCN2                 0.012   PREDICTED: hemicentin 2 
HLA-DRA               0.012   major histocompatibility complex, class II, DR alpha...
SEPN1                 0.012   selenoprotein N, 1 isoform 1 precursor 
ACOX1                 0.012   acyl-Coenzyme A oxidase 1 isoform b 
ACOX1                 0.012   acyl-Coenzyme A oxidase 1 isoform a 
MUSK                  0.012   skeletal muscle receptor tyrosine kinase 
MUC16                 0.010   mucin 16 
LRIG1                 0.010   leucine-rich repeats and immunoglobulin-like domains...
ZXDC                  0.010   ZXD family zinc finger C isoform 2 
ZXDC                  0.010   ZXD family zinc finger C isoform 1 
TCF4                  0.010   transcription factor 4 isoform b 
HMCN1                 0.010   hemicentin 1 
MOV10L1               0.010   MOV10-like 1 
CEACAM5               0.007   carcinoembryonic antigen-related cell adhesion molec...
KIAA0319L             0.007   dyslexia susceptibility 2-like 
SEPN1                 0.007   selenoprotein N, 1 isoform 2 precursor 
LMTK2                 0.007   lemur tyrosine kinase 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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