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Search of human proteins with 21687224
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|21687224 solute carrier family 30 (zinc transporter), member
6 [Homo sapiens]
(461 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|21687224 solute carrier family 30 (zinc transporter), member ... 926 0.0
gi|20070323 solute carrier family 30 (zinc transporter), member ... 108 8e-24
gi|222080086 zinc transporter like 2 [Homo sapiens] 96 9e-20
gi|40255009 zinc transporter like 2 [Homo sapiens] 96 9e-20
gi|21361112 solute carrier family 30 (zinc transporter), member ... 67 4e-11
gi|21359890 solute carrier family 30 (zinc transporter), member ... 59 9e-09
gi|52352805 solute carrier family 30, member 2 isoform 1 [Homo s... 58 2e-08
gi|64762489 solute carrier family 30 member 8 [Homo sapiens] 46 8e-05
gi|52352803 solute carrier family 30 (zinc transporter), member ... 43 5e-04
gi|52351208 solute carrier family 30 (zinc transporter), member ... 42 9e-04
gi|14210520 solute carrier family 30, member 2 isoform 2 [Homo s... 37 0.029
gi|219802034 nuclear factor related to kappaB binding protein is... 35 0.14
gi|23346420 nuclear factor related to kappaB binding protein iso... 35 0.14
gi|153252132 ribosomal protein L31 isoform 3 [Homo sapiens] 35 0.19
gi|4506633 ribosomal protein L31 isoform 1 [Homo sapiens] 34 0.24
gi|148746199 ribosomal protein L31 isoform 2 [Homo sapiens] 34 0.32
gi|153792764 hypothetical protein LOC57624 [Homo sapiens] 31 2.7
gi|239753409 PREDICTED: similar to hCG1811893 [Homo sapiens] 31 2.7
gi|239754668 PREDICTED: mucin 12 [Homo sapiens] 30 3.5
gi|239749217 PREDICTED: similar to Mucin-12, partial [Homo sapiens] 30 3.5
gi|239743293 PREDICTED: mucin 12 [Homo sapiens] 30 3.5
gi|149944548 neurobeachin-like 2 [Homo sapiens] 30 3.5
gi|46275839 hypothetical protein LOC135154 [Homo sapiens] 30 3.5
gi|166706915 GLIS family zinc finger 1 [Homo sapiens] 30 4.6
gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens] 30 6.0
gi|20336285 solute carrier family 26, member 8 isoform b [Homo s... 29 7.9
>gi|21687224 solute carrier family 30 (zinc transporter), member 6
[Homo sapiens]
Length = 461
Score = 926 bits (2392), Expect = 0.0
Identities = 461/461 (100%), Positives = 461/461 (100%)
Query: 1 MGTIHLFRKPQRSFFGKLLREFRLVAADRRSWKILLFGVINLICTGFLLMWCSSTNSIAL 60
MGTIHLFRKPQRSFFGKLLREFRLVAADRRSWKILLFGVINLICTGFLLMWCSSTNSIAL
Sbjct: 1 MGTIHLFRKPQRSFFGKLLREFRLVAADRRSWKILLFGVINLICTGFLLMWCSSTNSIAL 60
Query: 61 TAYTYLTIFDLFSLMTCLISYWVTLRKPSPVYSFGFERLEVLAVFASTVLAQLGALFILK 120
TAYTYLTIFDLFSLMTCLISYWVTLRKPSPVYSFGFERLEVLAVFASTVLAQLGALFILK
Sbjct: 61 TAYTYLTIFDLFSLMTCLISYWVTLRKPSPVYSFGFERLEVLAVFASTVLAQLGALFILK 120
Query: 121 ESAERFLEQPEIHTGRLLVGTFVALCFNLFTMLSIRNKPFAYVSEAASTSWLQEHVADLS 180
ESAERFLEQPEIHTGRLLVGTFVALCFNLFTMLSIRNKPFAYVSEAASTSWLQEHVADLS
Sbjct: 121 ESAERFLEQPEIHTGRLLVGTFVALCFNLFTMLSIRNKPFAYVSEAASTSWLQEHVADLS 180
Query: 181 RSLCGIIPGLSSIFLPRMNPFVLIDLAGAFALCITYMLIEINNYFAVDTASAIAIALMTF 240
RSLCGIIPGLSSIFLPRMNPFVLIDLAGAFALCITYMLIEINNYFAVDTASAIAIALMTF
Sbjct: 181 RSLCGIIPGLSSIFLPRMNPFVLIDLAGAFALCITYMLIEINNYFAVDTASAIAIALMTF 240
Query: 241 GTMYPMSVYSGKVLLQTTPPHVIGQLDKLIREVSTLDGVLEVRNEHFWTLGFGSLAGSVH 300
GTMYPMSVYSGKVLLQTTPPHVIGQLDKLIREVSTLDGVLEVRNEHFWTLGFGSLAGSVH
Sbjct: 241 GTMYPMSVYSGKVLLQTTPPHVIGQLDKLIREVSTLDGVLEVRNEHFWTLGFGSLAGSVH 300
Query: 301 VRIRRDANEQMVLAHVTNRLYTLVSTLTVQIFKDDWIRPALLSGPVAANVLNFSDHHVIP 360
VRIRRDANEQMVLAHVTNRLYTLVSTLTVQIFKDDWIRPALLSGPVAANVLNFSDHHVIP
Sbjct: 301 VRIRRDANEQMVLAHVTNRLYTLVSTLTVQIFKDDWIRPALLSGPVAANVLNFSDHHVIP 360
Query: 361 MPLLKGTDDLNPVTSTPAKPSSPPPEFSFNTPGKNVNPVILLNTQTRPYGFGLNHGHTPY 420
MPLLKGTDDLNPVTSTPAKPSSPPPEFSFNTPGKNVNPVILLNTQTRPYGFGLNHGHTPY
Sbjct: 361 MPLLKGTDDLNPVTSTPAKPSSPPPEFSFNTPGKNVNPVILLNTQTRPYGFGLNHGHTPY 420
Query: 421 SSMLNQGLGVPGIGATQGLRTGFTNIPSRYGTNNRIGQPRP 461
SSMLNQGLGVPGIGATQGLRTGFTNIPSRYGTNNRIGQPRP
Sbjct: 421 SSMLNQGLGVPGIGATQGLRTGFTNIPSRYGTNNRIGQPRP 461
>gi|20070323 solute carrier family 30 (zinc transporter), member 5
isoform 1 [Homo sapiens]
Length = 765
Score = 108 bits (271), Expect = 8e-24
Identities = 84/351 (23%), Positives = 164/351 (46%), Gaps = 28/351 (7%)
Query: 7 FRKPQRSFFGKLLREFRLVAADRRSWKILLFGVINLICTGFLLMWCSSTNSIALTAYTYL 66
F+ +S + + + + S +I F +NL+ T L + TNS+ L + +
Sbjct: 392 FQHSSQSIPRFIKESLKQILEESDSRQIFYFLCLNLLFTFVELFYGVLTNSLGLISDGFH 451
Query: 67 TIFDLFSLMTCLISYWVTLRKPSPVYSFGFERLEVLAVFASTVLAQLGALFILKESAERF 126
+FD +L+ L + ++ K + ++S+G+ R+E+L+ F + + + A F+ ES R
Sbjct: 452 MLFDCSALVMGLFAALMSRWKATRIFSYGYGRIEILSGFINGLFLIVIAFFVFMESVARL 511
Query: 127 LEQPEIHTGRLLVGTFVALCFNLFTMLSIRNKPFAYVSEAASTSWLQEHVADLSRSLC-- 184
++ PE+ T L + L NL + + + S A S H +D S S
Sbjct: 512 IDPPELDTHMLTPVSVGGLIVNLIGICAFSHAH----SHAHGASQGSCHSSDHSHSHHMH 567
Query: 185 ----------------GIIPGLSSIFLPRMNPFVLIDLAGAFALCITYMLIEINNYFAVD 228
G+ + +FL VL D G+ + ++ +LIE +F D
Sbjct: 568 GHSDHGHGHSHGSAGGGMNANMRGVFL-----HVLADTLGSIGVIVSTVLIEQFGWFIAD 622
Query: 229 TASAIAIALMTFGTMYPMSVYSGKVLLQTTPPHVIGQLDKLIREVSTLDGVLEVRNEHFW 288
++ IA++ F ++ P+ + +VLL PP +L + ++ ++G++ R+ HFW
Sbjct: 623 PLCSLFIAILIFLSVVPLIKDACQVLLLRLPPEYEKELHIALEKIQKIEGLISYRDPHFW 682
Query: 289 TLGFGSLAGSVHVRIRRDANEQMVLAHVTNRLYTL-VSTLTVQIFKDDWIR 338
+AG++H+++ D EQ ++ VT L V+ LT+Q+ K+ + +
Sbjct: 683 RHSASIVAGTIHIQVTSDVLEQRIVQQVTGILKDAGVNNLTIQVEKEAYFQ 733
>gi|222080086 zinc transporter like 2 [Homo sapiens]
Length = 376
Score = 95.5 bits (236), Expect = 9e-20
Identities = 83/362 (22%), Positives = 157/362 (43%), Gaps = 38/362 (10%)
Query: 7 FRKPQRSFFGKLLREFRLVAADRRSWKILLFGVINLICTGFLLMWCSSTNSIALTAYTYL 66
++ P+ + FGK+ FR + +D+ S + F +NL L++ +N + L + ++
Sbjct: 11 YKPPKFNLFGKISGWFRSILSDKTSRNLFFFLCLNLSFAFVELLYGIWSNCLGLISDSFH 70
Query: 67 TIFDLFSLMTCLISYWVTLRKPSPVYSFGFERLEVLAVFASTVLAQLGALFILKESAERF 126
FD +++ L + ++ + + +S+G+ R EVLA F + + A FI E ER
Sbjct: 71 MFFDSTAILAGLAASVISKWRDNDAFSYGYVRAEVLAGFVNGLFLIFTAFFIFSEGVERA 130
Query: 127 LEQPEIHTGRLLVGTFVALCFNLFTMLSIRNKPFAY------------------------ 162
L P++H RLL+ + + NL + ++ +
Sbjct: 131 LAPPDVHHERLLLVSILGFVVNLIGIFVFKHGGHGHSHGSGHGHSHSLFNGALDQAHGHV 190
Query: 163 -------VSEAASTSWLQEHVADLSRSLCG----IIPGLSSIFLPRMNPFVLIDLAGAFA 211
V A+ S H S G G S L + +L D G+
Sbjct: 191 DHCHSHEVKHGAAHSHDHAHGHGHFHSHDGPSLKETTGPSRQILQGVFLHILADTLGSIG 250
Query: 212 LCITYMLIEINNYFAVDTASAIAIALMTFGTMYPMSVYSGKVLLQTTPPHVIGQLDKLIR 271
+ + ++++ D +I IA++ ++ P+ S +L+Q TPP + L + +
Sbjct: 251 VIASAIMMQNFGLMIADPICSILIAILIVVSVIPLLRESVGILMQRTPPLLENSLPQCYQ 310
Query: 272 EVSTLDGVLEVRNEHFWTLGFGSLAGSVHVRIRRDANEQMVLAHVTNRLYTL--VSTLTV 329
V L GV ++ +HFWTL G++ + + DA+ + +L+ T+ ++T V L V
Sbjct: 311 RVQQLQGVYSLQEQHFWTLCSDVYVGTLKLIVAPDADARWILSQ-THNIFTQAGVRQLYV 369
Query: 330 QI 331
QI
Sbjct: 370 QI 371
>gi|40255009 zinc transporter like 2 [Homo sapiens]
Length = 376
Score = 95.5 bits (236), Expect = 9e-20
Identities = 83/362 (22%), Positives = 157/362 (43%), Gaps = 38/362 (10%)
Query: 7 FRKPQRSFFGKLLREFRLVAADRRSWKILLFGVINLICTGFLLMWCSSTNSIALTAYTYL 66
++ P+ + FGK+ FR + +D+ S + F +NL L++ +N + L + ++
Sbjct: 11 YKPPKFNLFGKISGWFRSILSDKTSRNLFFFLCLNLSFAFVELLYGIWSNCLGLISDSFH 70
Query: 67 TIFDLFSLMTCLISYWVTLRKPSPVYSFGFERLEVLAVFASTVLAQLGALFILKESAERF 126
FD +++ L + ++ + + +S+G+ R EVLA F + + A FI E ER
Sbjct: 71 MFFDSTAILAGLAASVISKWRDNDAFSYGYVRAEVLAGFVNGLFLIFTAFFIFSEGVERA 130
Query: 127 LEQPEIHTGRLLVGTFVALCFNLFTMLSIRNKPFAY------------------------ 162
L P++H RLL+ + + NL + ++ +
Sbjct: 131 LAPPDVHHERLLLVSILGFVVNLIGIFVFKHGGHGHSHGSGHGHSHSLFNGALDQAHGHV 190
Query: 163 -------VSEAASTSWLQEHVADLSRSLCG----IIPGLSSIFLPRMNPFVLIDLAGAFA 211
V A+ S H S G G S L + +L D G+
Sbjct: 191 DHCHSHEVKHGAAHSHDHAHGHGHFHSHDGPSLKETTGPSRQILQGVFLHILADTLGSIG 250
Query: 212 LCITYMLIEINNYFAVDTASAIAIALMTFGTMYPMSVYSGKVLLQTTPPHVIGQLDKLIR 271
+ + ++++ D +I IA++ ++ P+ S +L+Q TPP + L + +
Sbjct: 251 VIASAIMMQNFGLMIADPICSILIAILIVVSVIPLLRESVGILMQRTPPLLENSLPQCYQ 310
Query: 272 EVSTLDGVLEVRNEHFWTLGFGSLAGSVHVRIRRDANEQMVLAHVTNRLYTL--VSTLTV 329
V L GV ++ +HFWTL G++ + + DA+ + +L+ T+ ++T V L V
Sbjct: 311 RVQQLQGVYSLQEQHFWTLCSDVYVGTLKLIVAPDADARWILSQ-THNIFTQAGVRQLYV 369
Query: 330 QI 331
QI
Sbjct: 370 QI 371
>gi|21361112 solute carrier family 30 (zinc transporter), member 3
[Homo sapiens]
Length = 388
Score = 66.6 bits (161), Expect = 4e-11
Identities = 70/282 (24%), Positives = 122/282 (43%), Gaps = 16/282 (5%)
Query: 56 NSIALTAYTYLTIFDLFSLMTCLISYWVTLRKPSPVYSFGFERLEVLAVFASTVLAQLGA 115
+S+A+ + D+ S+M L S W++ R + +FG+ R E L AS V +
Sbjct: 98 HSLAIMTDAAHLLADVGSMMGSLFSLWLSTRPATRTMTFGWHRSETLGALASVVSLWMVT 157
Query: 116 LFILKESAERFLEQP-EIHTGRLLVGTFVALCFNLFT--MLSIRNKPFAYVSEAASTSWL 172
+L + R L I G +L+ +A+C NL +L P ++ S A + L
Sbjct: 158 GILLYLAFVRLLHSDYHIEGGAMLLTASIAVCANLLMAFVLHQAGPPHSHGSRGAEYAPL 217
Query: 173 QEHVADLSRSLCGIIPGLSSIFLPRMNPFVLIDLAGAFALCITYMLIEIN-NYFAVDTAS 231
+E + +P L + + VL DL +F + +LI Y A D S
Sbjct: 218 EEGPEE-------PLP-LGNTSVRAAFVHVLGDLLQSFGVLAASILIYFKPQYKAADPIS 269
Query: 232 AIAIALMTFGTMYPMSVYSGKVLLQTTPPHVIGQLDKLIREVSTLDGVLEVRNEHFWTLG 291
++ G+ P ++L++ TP +V + + + ++ GV H W L
Sbjct: 270 TFLFSICALGSTAPTLRDVLRILMEGTPRNV--GFEPVRDTLLSVPGVRATHELHLWALT 327
Query: 292 FGSLAGSVHVRIRRDANEQMVLAHVTNRLYTL--VSTLTVQI 331
S H+ I A+ + VLA ++RLY+ S+ T+Q+
Sbjct: 328 LTYHVASAHLAIDSTADPEAVLAEASSRLYSRFGFSSCTLQV 369
>gi|21359890 solute carrier family 30 (zinc transporter), member 4
[Homo sapiens]
Length = 429
Score = 58.9 bits (141), Expect = 9e-09
Identities = 53/250 (21%), Positives = 107/250 (42%), Gaps = 9/250 (3%)
Query: 56 NSIALTAYTYLTIFDLFSLMTCLISYWVTLRKPSPVYSFGFERLEVLAVFASTVLAQLGA 115
NS+A+ + DL +++ L++ W++ + P+ ++FGF RLEVL+ S +L +
Sbjct: 136 NSLAIMTDALHMLTDLSAIILTLLALWLSSKSPTKRFTFGFHRLEVLSAMISVLLVYILM 195
Query: 116 LFILKESAERFLEQP-EIHTGRLLVGTFVALCFNLFTMLSIRNKPFAYVSEAASTSWLQE 174
F+L E+ +R + EI+ +L+ V + N+ + + S S
Sbjct: 196 GFLLYEAVQRTIHMNYEINGDIMLITAAVGVAVNVIMGFLLNQSGHRH-----SHSHSLP 250
Query: 175 HVADLSRSLCGIIPGLSSIFLPRMNPFVLIDLAGAFALCITYMLIEIN-NYFAVDTASAI 233
+ S C G S+ + L DL + + I +I Y D
Sbjct: 251 SNSPTRGSGCERNHGQDSLAVRAAFVHALGDLVQSVGVLIAAYIIRFKPEYKIADPICTY 310
Query: 234 AIALMTFGTMYPMSVYSGKVLLQTTPPHVIGQLDKLIREVSTLDGVLEVRNEHFWTLGFG 293
+L+ T + + + ++L+ P H+ +D + + ++ V V + + W+L G
Sbjct: 311 VFSLLVAFTTFRIIWDTVVIILEGVPSHL--NVDYIKEALMKIEDVYSVEDLNIWSLTSG 368
Query: 294 SLAGSVHVRI 303
VH+++
Sbjct: 369 KSTAIVHIQL 378
>gi|52352805 solute carrier family 30, member 2 isoform 1 [Homo
sapiens]
Length = 372
Score = 57.8 bits (138), Expect = 2e-08
Identities = 68/322 (21%), Positives = 132/322 (40%), Gaps = 33/322 (10%)
Query: 16 GKLLREFRLVAADRRSWKILLFGVINLICTGFLLMWCSSTNSIALTAYTYLTIFDLFSLM 75
GK R+ + +A I L +I + G+L +S+A+ + D S++
Sbjct: 68 GKAQRQLYVASA------ICLLFMIGEVVGGYL------AHSLAVMTDAAHLLTDFASML 115
Query: 76 TCLISYWVTLRKPSPVYSFGFERLEVLAVFASTVLAQLGALFILKESAERFLE-QPEIHT 134
L S W++ R + +FG++R E+L S + + ++ + ER + EI
Sbjct: 116 ISLFSLWMSSRPATKTMNFGWQRAEILGALVSVLSIWVVTGVLVYLAVERLISGDYEIDG 175
Query: 135 GRLLVGTFVALCFNLFTMLSIRNKPFAYVSEAASTSWLQEHVADLSRSLCGIIPGLSSIF 194
G +L+ + A+ N+ L++ + +T+ +E+ P + + F
Sbjct: 176 GTMLITSGCAVAVNIIMGLTLHQSGHGH--SHGTTNQQEEN------------PSVRAAF 221
Query: 195 LPRMNPFVLIDLAGAFALCITYMLIEINNYFAVDTASAIAIALMTFGTMYPMSVYSGKVL 254
+ + F + L Y+L Y VD +++ GT + VL
Sbjct: 222 IHVIGDF----MQSMGVLVAAYILYFKPEYKYVDPICTFVFSILVLGTTLTILRDVILVL 277
Query: 255 LQTTPPHVIGQLDKLIREVSTLDGVLEVRNEHFWTLGFGSLAGSVHVRIRRDANEQMVLA 314
++ TP V + + +++GV + + H W L SVH+ I ++ + Q VL
Sbjct: 278 MEGTPKGV--DFTAVRDLLLSVEGVEALHSLHIWALTVAQPVLSVHIAIAQNTDAQAVLK 335
Query: 315 HVTNRLYTLVSTLTVQIFKDDW 336
++RL TV I +D+
Sbjct: 336 TASSRLQGKFHFHTVTIQIEDY 357
>gi|64762489 solute carrier family 30 member 8 [Homo sapiens]
Length = 369
Score = 45.8 bits (107), Expect = 8e-05
Identities = 63/284 (22%), Positives = 115/284 (40%), Gaps = 38/284 (13%)
Query: 57 SIALTAYTYLTIFDLFSLMTCLISYWVTLRKPSPVYSFGFERLEVLAVFASTVLAQLGAL 116
S+A+ + DL S + L S W++ + PS +FG+ R E+L S + +
Sbjct: 97 SLAVVTDAAHLLIDLTSFLLSLFSLWLSSKPPSKRLTFGWHRAEILGALLSILCIWVVTG 156
Query: 117 FILKESAERFL-EQPEIHTGRLLVGTFVALCFNLFTMLSIRNKPFAY----VSEAASTSW 171
++ + ER L +I +++ + A+ N+ + + + + V AS
Sbjct: 157 VLVYLACERLLYPDYQIQATVMIIVSSCAVAANIVLTVVLHQRCLGHNHKEVQANASVRA 216
Query: 172 LQEH-VADLSRSLCGIIPGLSSIFLPRMNPFVLIDLAGAFALCITYMLIEINNYFAVDTA 230
H + DL +S+ +I L F P + + D F I + A
Sbjct: 217 AFVHALGDLFQSISVLISALIIYFKPE---YKIADPICTFIFSILVL------------A 261
Query: 231 SAIAIALMTFGTMYPMSVYSGKVLLQTTPPHVIGQLDKLIREVSTLDGVLEVRNEHFWTL 290
S I I L F + L++ P + + + +DGVL V + H W+L
Sbjct: 262 STITI-LKDFSIL----------LMEGVPKSL--NYSGVKELILAVDGVLSVHSLHIWSL 308
Query: 291 GFGSLAGSVHVRIRRDANEQMV---LAHVTNRLYTLVSTLTVQI 331
+ S HV + Q+V +A ++ +T+ S LT+Q+
Sbjct: 309 TMNQVILSAHVATAASRDSQVVRREIAKALSKSFTMHS-LTIQM 351
>gi|52352803 solute carrier family 30 (zinc transporter), member 1
[Homo sapiens]
Length = 507
Score = 43.1 bits (100), Expect = 5e-04
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 227 VDTASAIAIALMTFGTMYPMSVYSGKVLLQTTPPHVIGQLDKLIREVSTLDGVLEVRNEH 286
+D + + + T YP+ S +LLQT P + + LI+E+ ++GV EV H
Sbjct: 316 LDPTLCVVMVCILLYTTYPLLKESALILLQTVPKQI--DIRNLIKELRNVEGVEEVHELH 373
Query: 287 FWTLGFGSLAGSVHVR 302
W L + + H++
Sbjct: 374 VWQLAGSRIIATAHIK 389
Score = 35.0 bits (79), Expect = 0.14
Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 55 TNSIALTAYTYLTIFDLFSLMTCLISYWVTLRK-PSPVYSFGFERLEVLAVFASTVLAQL 113
T+S+A+ + ++ + D+ +L+ L++ R + +FG+ R EV+ + +
Sbjct: 32 TSSLAMLSDSFHMLSDVLALVVALVAERFARRTHATQKNTFGWIRAEVMGALVNAIFLTG 91
Query: 114 GALFILKESAERFLEQPEIHTGRLLVGTFVA 144
IL E+ ERF+E E+ +++G VA
Sbjct: 92 LCFAILLEAIERFIEPHEMQQPLVVLGVGVA 122
>gi|52351208 solute carrier family 30 (zinc transporter), member 10
[Homo sapiens]
Length = 485
Score = 42.4 bits (98), Expect = 9e-04
Identities = 18/84 (21%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 227 VDTASAIAIALMTFGTMYPMSVYSGKVLLQTTPPHVIGQLDKLIREVSTLDGVLEVRNEH 286
+D + + + ++ + +P+ + +LLQ P V +++L+ ++S + G+ V H
Sbjct: 279 IDPSLTVLMVIIILSSAFPLIKETAAILLQMVPKGV--NMEELMSKLSAVPGISSVHEVH 336
Query: 287 FWTLGFGSLAGSVHVRIRRDANEQ 310
W L G + ++H++ +D Q
Sbjct: 337 IWELVSGKIIATLHIKYPKDRGYQ 360
>gi|14210520 solute carrier family 30, member 2 isoform 2 [Homo
sapiens]
Length = 323
Score = 37.4 bits (85), Expect = 0.029
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 21/241 (8%)
Query: 97 ERLEVLAVFASTVLAQLGALFILKESAERFLEQP-EIHTGRLLVGTFVALCFNLFTMLSI 155
E +E+L S + + ++ + ER + EI G +L+ + A+ N+ L++
Sbjct: 88 EVVEILGALVSVLSIWVVTGVLVYLAVERLISGDYEIDGGTMLITSGCAVAVNIIMGLTL 147
Query: 156 RNKPFAYVSEAASTSWLQEHVADLSRSLCGIIPGLSSIFLPRMNPFVLIDLAGAFALCIT 215
+ +T+ +E+ P + + F+ + F + L
Sbjct: 148 HQSGHGH--SHGTTNQQEEN------------PSVRAAFIHVIGDF----MQSMGVLVAA 189
Query: 216 YMLIEINNYFAVDTASAIAIALMTFGTMYPMSVYSGKVLLQTTPPHVIGQLDKLIREVST 275
Y+L Y VD +++ GT + VL++ TP V + + +
Sbjct: 190 YILYFKPEYKYVDPICTFVFSILVLGTTLTILRDVILVLMEGTPKGV--DFTAVRDLLLS 247
Query: 276 LDGVLEVRNEHFWTLGFGSLAGSVHVRIRRDANEQMVLAHVTNRLYTLVSTLTVQIFKDD 335
++GV + + H W L SVH+ I ++ + Q VL ++RL TV I +D
Sbjct: 248 VEGVEALHSLHIWALTVAQPVLSVHIAIAQNTDAQAVLKTASSRLQGKFHFHTVTIQIED 307
Query: 336 W 336
+
Sbjct: 308 Y 308
>gi|219802034 nuclear factor related to kappaB binding protein
isoform 1 [Homo sapiens]
Length = 1299
Score = 35.0 bits (79), Expect = 0.14
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 19/81 (23%)
Query: 341 LLSGPVAANVLNFSDHHVIPMPLLKGTDDLNPVTST----PAKPSSPPPEFSFN------ 390
L SGP + ++ SD + P P + PVT T PA P SPPP + N
Sbjct: 698 LSSGPSEQSQMSLSDSSMPPTP-------VTPVTPTTPALPAIPISPPPVSAVNKSGPST 750
Query: 391 --TPGKNVNPVILLNTQTRPY 409
P K+ + V+L+++ T P+
Sbjct: 751 VSEPAKSSSGVLLVSSPTMPH 771
>gi|23346420 nuclear factor related to kappaB binding protein
isoform 2 [Homo sapiens]
Length = 1324
Score = 35.0 bits (79), Expect = 0.14
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 19/81 (23%)
Query: 341 LLSGPVAANVLNFSDHHVIPMPLLKGTDDLNPVTST----PAKPSSPPPEFSFN------ 390
L SGP + ++ SD + P P + PVT T PA P SPPP + N
Sbjct: 723 LSSGPSEQSQMSLSDSSMPPTP-------VTPVTPTTPALPAIPISPPPVSAVNKSGPST 775
Query: 391 --TPGKNVNPVILLNTQTRPY 409
P K+ + V+L+++ T P+
Sbjct: 776 VSEPAKSSSGVLLVSSPTMPH 796
>gi|153252132 ribosomal protein L31 isoform 3 [Homo sapiens]
Length = 121
Score = 34.7 bits (78), Expect = 0.19
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 260 PHVIGQLDKL-IREVSTLDGVLEVR-NEHFWTLGFGSLAGSVHVRIRRDANEQMVLAHVT 317
P + ++ K ++E+ T D ++ R N+ W G ++ + VR+ R NE
Sbjct: 43 PRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNED---EDSP 99
Query: 318 NRLYTLVSTLTVQIFKDDWIRP 339
N+LYTLV+ + V FK + P
Sbjct: 100 NKLYTLVTYVPVTTFKSKFSIP 121
>gi|4506633 ribosomal protein L31 isoform 1 [Homo sapiens]
Length = 125
Score = 34.3 bits (77), Expect = 0.24
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 260 PHVIGQLDKL-IREVSTLDGVLEVR-NEHFWTLGFGSLAGSVHVRIRRDANEQMVLAHVT 317
P + ++ K ++E+ T D ++ R N+ W G ++ + VR+ R NE
Sbjct: 43 PRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNED---EDSP 99
Query: 318 NRLYTLVSTLTVQIFKD 334
N+LYTLV+ + V FK+
Sbjct: 100 NKLYTLVTYVPVTTFKN 116
>gi|148746199 ribosomal protein L31 isoform 2 [Homo sapiens]
Length = 128
Score = 33.9 bits (76), Expect = 0.32
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 260 PHVIGQLDKL-IREVSTLDGVLEVR-NEHFWTLGFGSLAGSVHVRIRRDANEQMVLAHVT 317
P + ++ K ++E+ T D ++ R N+ W G ++ + VR+ R NE
Sbjct: 43 PRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSRKRNED---EDSP 99
Query: 318 NRLYTLVSTLTVQIFK 333
N+LYTLV+ + V FK
Sbjct: 100 NKLYTLVTYVPVTTFK 115
>gi|153792764 hypothetical protein LOC57624 [Homo sapiens]
Length = 653
Score = 30.8 bits (68), Expect = 2.7
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 13/59 (22%)
Query: 370 LNPVTSTPAKPSSPPPEFSFNTPGKNVNPVILLNTQTRPYGFGLNHGHTPYSSMLNQGL 428
L P ++TPA SSPPP P L TQ+ P+G+ +H +P + + L
Sbjct: 401 LGPASATPALSSSPPP------------PSTLYRTQS-PHGYPKSHSTSPSPVSMGRSL 446
>gi|239753409 PREDICTED: similar to hCG1811893 [Homo sapiens]
Length = 669
Score = 30.8 bits (68), Expect = 2.7
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 13/59 (22%)
Query: 370 LNPVTSTPAKPSSPPPEFSFNTPGKNVNPVILLNTQTRPYGFGLNHGHTPYSSMLNQGL 428
L P ++TPA SSPPP P L TQ+ P+G+ +H +P + + L
Sbjct: 401 LGPASATPALSSSPPP------------PSTLYRTQS-PHGYPKSHSTSPSPVSMGRSL 446
>gi|239754668 PREDICTED: mucin 12 [Homo sapiens]
Length = 1952
Score = 30.4 bits (67), Expect = 3.5
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 12/88 (13%)
Query: 374 TSTPAKPSSPPPEFSFNTPGKNVNPVILLNTQTRPY-GFGLNHGHTPYSSMLNQGLGVPG 432
T++ + PSS P +F+ G +V I +T T+ + N GH+ S++ + G G
Sbjct: 98 TTSASTPSSSDPFTTFSDYGVSVT-FITGSTATKHFLDSSTNSGHSEESTVSHSGPGA-- 154
Query: 433 IGATQGLRTGFTNIPSRYGTNNRIGQPR 460
TG T PS T+ +G+P+
Sbjct: 155 --------TGTTLFPSHSATSVFVGEPK 174
>gi|239749217 PREDICTED: similar to Mucin-12, partial [Homo sapiens]
Length = 861
Score = 30.4 bits (67), Expect = 3.5
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 12/88 (13%)
Query: 374 TSTPAKPSSPPPEFSFNTPGKNVNPVILLNTQTRPY-GFGLNHGHTPYSSMLNQGLGVPG 432
T++ + PSS P +F+ G +V I +T T+ + N GH+ S++ + G G
Sbjct: 33 TTSASTPSSSDPFTTFSDYGVSVT-FITGSTATKHFLDSSTNSGHSEESTVSHSGPGA-- 89
Query: 433 IGATQGLRTGFTNIPSRYGTNNRIGQPR 460
TG T PS T+ +G+P+
Sbjct: 90 --------TGTTLFPSHSATSVFVGEPK 109
>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
Length = 5478
Score = 30.4 bits (67), Expect = 3.5
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 12/88 (13%)
Query: 374 TSTPAKPSSPPPEFSFNTPGKNVNPVILLNTQTRPY-GFGLNHGHTPYSSMLNQGLGVPG 432
T++ + PSS P +F+ G +V I +T T+ + N GH+ S++ + G G
Sbjct: 177 TTSASTPSSSDPFTTFSDYGVSVT-FITGSTATKHFLDSSTNSGHSEESTVSHSGPGA-- 233
Query: 433 IGATQGLRTGFTNIPSRYGTNNRIGQPR 460
TG T PS T+ +G+P+
Sbjct: 234 --------TGTTLFPSHSATSVFVGEPK 253
>gi|149944548 neurobeachin-like 2 [Homo sapiens]
Length = 2754
Score = 30.4 bits (67), Expect = 3.5
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 8/98 (8%)
Query: 371 NPVTSTPAKPSSP---PPEFSFNTPGKNVNPVILLNTQTRPYGFGLNHGHTPYSSMLNQG 427
+P S+P P+SP PP+ +P + + V L + P G H +P+ + + G
Sbjct: 1301 SPPPSSPESPTSPKPAPPKPPTESPAE-PSDVFLPSEAPCPDPDGFYHALSPFCTPFDLG 1359
Query: 428 LGVPGIG----ATQGLRTGFTNIPSRYGTNNRIGQPRP 461
L +G A G +G S+ GT + + PRP
Sbjct: 1360 LERSSVGSGNTAGGGGSSGTLTPASQPGTPSPLDGPRP 1397
>gi|46275839 hypothetical protein LOC135154 [Homo sapiens]
Length = 108
Score = 30.4 bits (67), Expect = 3.5
Identities = 14/31 (45%), Positives = 16/31 (51%)
Query: 355 DHHVIPMPLLKGTDDLNPVTSTPAKPSSPPP 385
D H+ PL K DD+NPVT P P P
Sbjct: 63 DSHLEKEPLEKFPDDVNPVTKEKGGPRGPEP 93
>gi|166706915 GLIS family zinc finger 1 [Homo sapiens]
Length = 620
Score = 30.0 bits (66), Expect = 4.6
Identities = 30/117 (25%), Positives = 46/117 (39%), Gaps = 28/117 (23%)
Query: 354 SDHHVIPMPLLKGTDD------LNPVTSTPAKPSSP---PPEFSFNTPGKNVNPVILLNT 404
S HH+ P+P+ + T D L+P+ S P K P PP ++PG P +
Sbjct: 437 SHHHLSPLPMAESTRDGLGPGLLSPIVS-PLKGLGPPPLPPSSQSHSPGGQPFPTLPSKP 495
Query: 405 QTRPYGFGLNHGHTPYSSMLNQGLGVPGIGATQGLRTGFTNIPS--RYGTNNRIGQP 459
P+ Q P + + QG + F +I S YG R+ +P
Sbjct: 496 SYPPF----------------QSPPPPPLPSPQGYQGSFHSIQSCFPYGDCYRMAEP 536
>gi|32140760 collagen, type XXVII, alpha 1 [Homo sapiens]
Length = 1860
Score = 29.6 bits (65), Expect = 6.0
Identities = 29/106 (27%), Positives = 42/106 (39%), Gaps = 4/106 (3%)
Query: 360 PMPLLKGTDDLN-PVTSTPAKPSSPPPEFSFNT-PGKNVNPVILLNTQTRPYGFGLNHGH 417
P+PL G + P++ +PS P+ S T P + P L++ RP G + H
Sbjct: 554 PVPLRPGKAARDVPLSDLTTRPSPRQPQPSQQTTPALVLAPAQFLSSSPRPTSSGYSIFH 613
Query: 418 TPYSSMLNQGLGVPGIGATQGL--RTGFTNIPSRYGTNNRIGQPRP 461
S+ +G PG GL G +P G G P P
Sbjct: 614 LAGSTPFPLLMGPPGPKGDCGLPGPPGLPGLPGIPGARGPRGPPGP 659
>gi|20336285 solute carrier family 26, member 8 isoform b [Homo
sapiens]
Length = 865
Score = 29.3 bits (64), Expect = 7.9
Identities = 37/177 (20%), Positives = 75/177 (42%), Gaps = 26/177 (14%)
Query: 101 VLAVFASTVLAQLGALFILKESAERFLEQPEIHTGRLLVGTFVALCFNLFTMLSIRNKPF 160
+ +F S +G+ F++ L+ + G+L++G+FV F+ + L NK
Sbjct: 136 IYVIFGSCHQMSIGSFFLVSALLINVLKVSPFNNGQLVMGSFVKNEFSAPSYLMGYNKSL 195
Query: 161 AYVSEAASTSWLQEHV------------ADLSRSLCGIIPGLSSIFLPRMNPFVLID--L 206
+ V+ + + + + + S++L +IP S LP F L+ +
Sbjct: 196 SVVATTTFLTGIIQIIGFTVIANKISMATETSQTLIDMIP--YSFLLPVTPDFSLLPKII 253
Query: 207 AGAFALCI--TYMLI-------EINNYFAVDTASAIAIALM-TFGTMYPMSVYSGKV 253
AF+L + +++LI ++NY IAI L + + V++G +
Sbjct: 254 LQAFSLSLVSSFLLIFLGKKIASLHNYSVNSNQDLIAIGLCNVVSSFFRSCVFTGAI 310
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.325 0.139 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,437,003
Number of Sequences: 37866
Number of extensions: 795374
Number of successful extensions: 3434
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 3405
Number of HSP's gapped (non-prelim): 34
length of query: 461
length of database: 18,247,518
effective HSP length: 106
effective length of query: 355
effective length of database: 14,233,722
effective search space: 5052971310
effective search space used: 5052971310
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.