Guide to the Human Genome
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Name: RPL31 Sequence: fasta or formatted (121aa) NCBI GI: 153252132
Description:

ribosomal protein L31 isoform 3

Referenced in:

Ribosomes

Other entries for this name:
alt prot [128aa] ribosomal protein L31 isoform 2
alt prot [125aa] ribosomal protein L31 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6          8           1
 C cysteine            0.0          0           0
 D aspartate           3.3          4           1
 E glutamate           5.8          7           1
 F phenylalanine       3.3          4           1
 G glycine             5.8          7           2
 H histidine           1.7          2           1
 I isoleucine          7.4          9           1
 K lysine             14.0         17           3
 L leucine             4.1          5           1
 M methionine          2.5          3           1
 N asparagine          5.0          6           1
 P proline             5.8          7           1
 Q glutamine           0.0          0           0
 R arginine           11.6         14           1
 S serine              4.1          5           1
 T threonine           6.6          8           2
 V valine              8.3         10           2
 W tryptophan          0.8          1           1
 Y tyrosine            3.3          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ribosomal protein L31 isoform 3 
RPL31                 0.950   ribosomal protein L31 isoform 1 
RPL31                 0.950   ribosomal protein L31 isoform 2 
SLC30A6               0.046   solute carrier family 30 (zinc transporter), member ...
KIAA0746              0.023   hypothetical protein LOC23231 
LRRFIP1               0.014   leucine rich repeat (in FLII) interacting protein 1...
LRRFIP1               0.014   leucine rich repeat (in FLII) interacting protein 1...
KDM5D                 0.009   jumonji, AT rich interactive domain 1D isoform 1 [H...
LOC646698             0.009   PREDICTED: similar to hCG92381 
LOC646698             0.009   PREDICTED: similar to hCG92381 
LOC646698             0.009   PREDICTED: hypothetical protein LOC646698 
PHACTR1               0.009   phosphatase and actin regulator 1 
DDX23                 0.005   DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 
RNF25                 0.005   ring finger protein 25 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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