Guide to the Human Genome
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Name: IGSF9 Sequence: fasta or formatted (1163aa) NCBI GI: 205277423
Description:

immunoglobulin superfamily, member 9 isoform b

Referenced in:

Additional Genes in Development

Other entries for this name:
alt prot [1179aa] immunoglobulin superfamily, member 9 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         95           2
 C cysteine            1.8         21           1
 D aspartate           3.8         44           2
 E glutamate           5.4         63           2
 F phenylalanine       2.8         32           2
 G glycine             8.7        101           2
 H histidine           1.8         21           2
 I isoleucine          2.2         26           2
 K lysine              2.0         23           1
 L leucine            11.4        133           2
 M methionine          0.6          7           1
 N asparagine          2.1         25           1
 P proline            12.1        141           3
 Q glutamine           4.0         47           1
 R arginine            7.1         82           4
 S serine              8.7        101           4
 T threonine           4.9         57           2
 V valine              8.5         99           2
 W tryptophan          1.8         21           1
 Y tyrosine            2.1         24           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   immunoglobulin superfamily, member 9 isoform b [Hom... 
IGSF9                 0.994   immunoglobulin superfamily, member 9 isoform a [Hom...
IGSF9B                0.301   immunoglobulin superfamily, member 9B 
HMCN1                 0.047   hemicentin 1 
ROBO2                 0.046   roundabout, axon guidance receptor, homolog 2 isofo...
ROBO2                 0.046   roundabout, axon guidance receptor, homolog 2 isofor...
DCC                   0.045   deleted in colorectal carcinoma 
HMCN2                 0.042   PREDICTED: hemicentin 2 
HMCN2                 0.042   PREDICTED: hemicentin 2 
HMCN2                 0.042   PREDICTED: hemicentin 2 
LOC100292387          0.042   PREDICTED: similar to hemicentin 2 
ROBO3                 0.041   roundabout, axon guidance receptor, homolog 3 
SDK2                  0.040   sidekick 2 
NEO1                  0.040   neogenin homolog 1 
L1CAM                 0.039   L1 cell adhesion molecule isoform 3 precursor [Homo...
L1CAM                 0.039   L1 cell adhesion molecule isoform 2 precursor 
L1CAM                 0.039   L1 cell adhesion molecule isoform 1 precursor 
PXDN                  0.039   peroxidasin 
CHL1                  0.038   cell adhesion molecule with homology to L1CAM precur...
PRTG                  0.038   protogenin 
DSCAM                 0.038   Down syndrome cell adhesion molecule isoform CHD2-42...
IGDCC3                0.037   putative neuronal cell adhesion molecule 
IGDCC4                0.037   immunoglobulin superfamily, DCC subclass, member 4 [...
ROBO1                 0.036   roundabout 1 isoform b 
ROBO1                 0.036   roundabout 1 isoform a 
NRCAM                 0.036   neuronal cell adhesion molecule isoform B precursor ...
NRCAM                 0.036   neuronal cell adhesion molecule isoform A precursor ...
ROBO1                 0.035   roundabout 1 isoform d 
ROBO1                 0.035   roundabout 1 isoform c 
LOC642132             0.035   PREDICTED: similar to roundabout 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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