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Search of human proteins with 197927233
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|197927233 transmembrane protein 20 isoform 1 [Homo sapiens]
(365 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|197927233 transmembrane protein 20 isoform 1 [Homo sapiens] 735 0.0
gi|23397492 transmembrane protein 20 isoform 2 [Homo sapiens] 728 0.0
gi|31652259 melanoma ubiquitous mutated protein [Homo sapiens] 37 0.036
gi|122937311 solute carrier family 35, member F4 [Homo sapiens] 37 0.036
gi|27735127 solute carrier family 35, member F3 [Homo sapiens] 36 0.062
gi|89044650 PREDICTED: acyl-malonyl condensing enzyme 1-like 1 [... 34 0.18
gi|169212904 PREDICTED: acyl-malonyl condensing enzyme 1-like 1 ... 33 0.40
gi|156616320 acyl-malonyl condensing enzyme 1-like 3 [Homo sapiens] 32 0.69
gi|15718767 TRAAK [Homo sapiens] 32 1.2
gi|20143946 potassium channel, subfamily K, member 10 isoform 3 ... 32 1.2
gi|20143944 potassium channel, subfamily K, member 10 isoform 2 ... 32 1.2
gi|10863961 potassium channel, subfamily K, member 10 isoform 1 ... 32 1.2
gi|40807366 PP3111 protein [Homo sapiens] 32 1.2
gi|31542943 solute carrier family 35, member F2 [Homo sapiens] 31 1.5
gi|30795231 brain abundant, membrane attached signal protein 1 [... 31 2.0
gi|4885193 AT rich interactive domain 3A (BRIGHT- like) protein ... 30 2.6
gi|166706868 synaptopodin 2-like isoform a [Homo sapiens] 30 2.6
gi|50301232 synaptopodin 2-like isoform b [Homo sapiens] 30 2.6
gi|223718438 solute carrier family 17 (sodium-dependent inorgani... 30 3.4
gi|21322234 solute carrier family 17 (sodium-dependent inorganic... 30 3.4
gi|14589891 cadherin 3, type 1 preproprotein [Homo sapiens] 30 3.4
gi|14589851 potassium channel, subfamily K, member 2 isoform b [... 30 3.4
gi|126365795 potassium channel, subfamily K, member 2 isoform c ... 30 3.4
gi|62912487 potassium channel, subfamily K, member 2 isoform a [... 30 3.4
gi|41393187 NADPH oxidase activator 1 [Homo sapiens] 30 3.4
gi|22748975 acyl-malonyl condensing enzyme 1 [Homo sapiens] 30 4.4
gi|27477113 sterol regulatory element-binding transcription fact... 30 4.4
gi|160707905 similar to solute carrier family 35, member E2 [Hom... 30 4.4
gi|33469137 solute carrier family 35, member E2 [Homo sapiens] 30 4.4
gi|9945322 solute carrier family 17, member 7 [Homo sapiens] 29 5.8
>gi|197927233 transmembrane protein 20 isoform 1 [Homo sapiens]
Length = 365
Score = 735 bits (1897), Expect = 0.0
Identities = 365/365 (100%), Positives = 365/365 (100%)
Query: 1 MRPQDSTGVAELQEPGLPLTDDAPPGATEEPAAAEAAGAPDRGRCWLCLSSPCCSRTEPE 60
MRPQDSTGVAELQEPGLPLTDDAPPGATEEPAAAEAAGAPDRGRCWLCLSSPCCSRTEPE
Sbjct: 1 MRPQDSTGVAELQEPGLPLTDDAPPGATEEPAAAEAAGAPDRGRCWLCLSSPCCSRTEPE 60
Query: 61 AKKKAPCPGLGLFYTLLSAFLFSVGSLFVKKVQDVHAVEISAFRCVFQMLVVIPCLIYRK 120
AKKKAPCPGLGLFYTLLSAFLFSVGSLFVKKVQDVHAVEISAFRCVFQMLVVIPCLIYRK
Sbjct: 61 AKKKAPCPGLGLFYTLLSAFLFSVGSLFVKKVQDVHAVEISAFRCVFQMLVVIPCLIYRK 120
Query: 121 TGFIGPKGQRIFLILRGVLGSTAMMLIYYAYQTMSLADATVITFSSPVFTSIFAWICLKE 180
TGFIGPKGQRIFLILRGVLGSTAMMLIYYAYQTMSLADATVITFSSPVFTSIFAWICLKE
Sbjct: 121 TGFIGPKGQRIFLILRGVLGSTAMMLIYYAYQTMSLADATVITFSSPVFTSIFAWICLKE 180
Query: 181 KYSPWDALFTVFTITGVILIVRPPFLFGSDTSGMEESYSGHLKGTFAAIGSAVFAASTLV 240
KYSPWDALFTVFTITGVILIVRPPFLFGSDTSGMEESYSGHLKGTFAAIGSAVFAASTLV
Sbjct: 181 KYSPWDALFTVFTITGVILIVRPPFLFGSDTSGMEESYSGHLKGTFAAIGSAVFAASTLV 240
Query: 241 ILRKMGKSVDYFLSIWYYVVLGLVESVIILSVLGEWSLPYCGLDRLFLIFIGLFGLGGQI 300
ILRKMGKSVDYFLSIWYYVVLGLVESVIILSVLGEWSLPYCGLDRLFLIFIGLFGLGGQI
Sbjct: 241 ILRKMGKSVDYFLSIWYYVVLGLVESVIILSVLGEWSLPYCGLDRLFLIFIGLFGLGGQI 300
Query: 301 FITKALQIEKAGPVAIMKTMDVVFAFIFQIIFFNNVPTWWTVGGALCVVASNVGAAIRKW 360
FITKALQIEKAGPVAIMKTMDVVFAFIFQIIFFNNVPTWWTVGGALCVVASNVGAAIRKW
Sbjct: 301 FITKALQIEKAGPVAIMKTMDVVFAFIFQIIFFNNVPTWWTVGGALCVVASNVGAAIRKW 360
Query: 361 YQSSK 365
YQSSK
Sbjct: 361 YQSSK 365
>gi|23397492 transmembrane protein 20 isoform 2 [Homo sapiens]
Length = 364
Score = 728 bits (1880), Expect = 0.0
Identities = 364/365 (99%), Positives = 364/365 (99%), Gaps = 1/365 (0%)
Query: 1 MRPQDSTGVAELQEPGLPLTDDAPPGATEEPAAAEAAGAPDRGRCWLCLSSPCCSRTEPE 60
MRPQDSTGVAELQEPGLPLTDDAPPGATEEPAAAEAAGAPDRGRCWLCLSSPCCSRTEP
Sbjct: 1 MRPQDSTGVAELQEPGLPLTDDAPPGATEEPAAAEAAGAPDRGRCWLCLSSPCCSRTEP- 59
Query: 61 AKKKAPCPGLGLFYTLLSAFLFSVGSLFVKKVQDVHAVEISAFRCVFQMLVVIPCLIYRK 120
AKKKAPCPGLGLFYTLLSAFLFSVGSLFVKKVQDVHAVEISAFRCVFQMLVVIPCLIYRK
Sbjct: 60 AKKKAPCPGLGLFYTLLSAFLFSVGSLFVKKVQDVHAVEISAFRCVFQMLVVIPCLIYRK 119
Query: 121 TGFIGPKGQRIFLILRGVLGSTAMMLIYYAYQTMSLADATVITFSSPVFTSIFAWICLKE 180
TGFIGPKGQRIFLILRGVLGSTAMMLIYYAYQTMSLADATVITFSSPVFTSIFAWICLKE
Sbjct: 120 TGFIGPKGQRIFLILRGVLGSTAMMLIYYAYQTMSLADATVITFSSPVFTSIFAWICLKE 179
Query: 181 KYSPWDALFTVFTITGVILIVRPPFLFGSDTSGMEESYSGHLKGTFAAIGSAVFAASTLV 240
KYSPWDALFTVFTITGVILIVRPPFLFGSDTSGMEESYSGHLKGTFAAIGSAVFAASTLV
Sbjct: 180 KYSPWDALFTVFTITGVILIVRPPFLFGSDTSGMEESYSGHLKGTFAAIGSAVFAASTLV 239
Query: 241 ILRKMGKSVDYFLSIWYYVVLGLVESVIILSVLGEWSLPYCGLDRLFLIFIGLFGLGGQI 300
ILRKMGKSVDYFLSIWYYVVLGLVESVIILSVLGEWSLPYCGLDRLFLIFIGLFGLGGQI
Sbjct: 240 ILRKMGKSVDYFLSIWYYVVLGLVESVIILSVLGEWSLPYCGLDRLFLIFIGLFGLGGQI 299
Query: 301 FITKALQIEKAGPVAIMKTMDVVFAFIFQIIFFNNVPTWWTVGGALCVVASNVGAAIRKW 360
FITKALQIEKAGPVAIMKTMDVVFAFIFQIIFFNNVPTWWTVGGALCVVASNVGAAIRKW
Sbjct: 300 FITKALQIEKAGPVAIMKTMDVVFAFIFQIIFFNNVPTWWTVGGALCVVASNVGAAIRKW 359
Query: 361 YQSSK 365
YQSSK
Sbjct: 360 YQSSK 364
>gi|31652259 melanoma ubiquitous mutated protein [Homo sapiens]
Length = 711
Score = 36.6 bits (83), Expect = 0.036
Identities = 27/72 (37%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 1 MRPQDSTGVAELQEPGLPLTDDAPPGATEEPAAAEAAGAPDRGRCWLCLSS-PCCSRTEP 59
+R D AE +PGLPL P A E A +E P + R L S P + EP
Sbjct: 260 VREDDPCANAEGHDPGLPLGSLTAPPAPEPSACSEPGECPAKKRPRLDGSQRPPAVQLEP 319
Query: 60 EAKKKAPCPGLG 71
A AP PG G
Sbjct: 320 MAAGAAPSPGPG 331
>gi|122937311 solute carrier family 35, member F4 [Homo sapiens]
Length = 521
Score = 36.6 bits (83), Expect = 0.036
Identities = 31/175 (17%), Positives = 76/175 (43%), Gaps = 26/175 (14%)
Query: 138 VLGSTAMMLIYYAYQTMSLADATVITFSSPVFTSIFAWICLKEKYSPWDALFTVFTITGV 197
+L + L A + ++ D + + + F + +WI LK+++ + + ITG+
Sbjct: 257 ILWTLTNYLYLLALKKLTATDVSALFCCNKAFVFLLSWIVLKDRFMGVRIVAAIMAITGI 316
Query: 198 ILIVRPPFLFGSDTSGMEESYSGHLKGTFAAIGSAVFAASTLVILR------KMGKSVDY 251
+++ + + ++ + G A+GSA +A V+ + G++ +
Sbjct: 317 VMM-----------AYADNFHADSIIGVAFAVGSASTSALYKVLFKMFLGSANFGEAAHF 365
Query: 252 FLSIWYY--VVLGLVESVIILSVLGEWS----LPY---CGLDRLFLIFIGLFGLG 297
++ ++ + + ++ + + WS LP+ CG+ L+L F L +G
Sbjct: 366 VSTLGFFNLIFISFTPVILYFTKVEHWSSFAALPWGCLCGMAGLWLAFNILVNVG 420
>gi|27735127 solute carrier family 35, member F3 [Homo sapiens]
Length = 490
Score = 35.8 bits (81), Expect = 0.062
Identities = 73/364 (20%), Positives = 127/364 (34%), Gaps = 71/364 (19%)
Query: 2 RPQDSTGVAELQEPGLPLTDDAPPGATEEPAAAEAAGAPDRGRCWLCLSSP--------- 52
RP+DS G AE Q P A EA G R RCW C +
Sbjct: 98 RPRDSPGPAEAQAP----------------AGVEAGGRASR-RCWTCSRAQLKKIFWGVA 140
Query: 53 -----CCSRTEPEAKKKAPCPGLGLFYTLLSAFLFSVGSLFVKKVQDVHAVEISAFRCVF 107
C S K +TL + F + LF H + + + V
Sbjct: 141 VVLCVCSSWAGSTQLAKLTFRKFDAPFTL-TWFATNWNFLFFPLYYVGHVCKSTEKQSVK 199
Query: 108 QMLVVIPCLIYRKT-GFIGPKGQRIFLILR-----GVLGSTAMMLIYYAYQTMSLADATV 161
Q YR+ F G G + + GVL + L +A + ++ D +V
Sbjct: 200 QR--------YRECCRFFGDNGLTLKVFFTKAAPFGVLWTLTNYLYLHAIKKINTTDVSV 251
Query: 162 ITFSSPVFTSIFAWICLKEKYSPWDALFTVFTITGVILIVRPPFLFGSDTSGM-----EE 216
+ + F + +WI L++++ + + I G++++ G+
Sbjct: 252 LFCCNKAFVFLLSWIVLRDRFMGVRIVAAILAIAGIVMMTYADGFHSHSVIGIALVVASA 311
Query: 217 SYSGHLKGTF-AAIGSAVFAASTLVILRKMGKSVDYFLSIWYYVVLGLVESVIILSVLGE 275
S S K F +GSA F + L + L ++ + + + ++ + +
Sbjct: 312 SMSALYKVLFKLLLGSAKFGEAALFL---------SILGVFNILFITCIPIILYFTKVEY 362
Query: 276 WS----LPY---CGLDRLFLIFIGLFGLGGQIFITKALQIEKAGPVAIMKTMDVVFAFIF 328
WS +P+ CG L L F + G + + + G V + V+ +
Sbjct: 363 WSSFDDIPWGNLCGFSVLLLTFNIVLNFGIAVTYPTLMSL---GIVLSIPVNAVIDHYTS 419
Query: 329 QIIF 332
QI+F
Sbjct: 420 QIVF 423
>gi|89044650 PREDICTED: acyl-malonyl condensing enzyme 1-like 1
[Homo sapiens]
Length = 338
Score = 34.3 bits (77), Expect = 0.18
Identities = 63/269 (23%), Positives = 111/269 (41%), Gaps = 20/269 (7%)
Query: 91 KVQDVHAVEISAFRCVFQMLVVIPCLIYRKTGFIGP---KGQRIFLILRGVLGSTAMMLI 147
+ ++ ++E+ RC+F + + + L R +GP +G+ F L VL +
Sbjct: 63 QASNLPSLELVICRCLFHLPIAL-LLKLRGDPLLGPPDIRGRTCFCALLNVLN---IGCA 118
Query: 148 YYAYQTMSLADATVITFSSPVFTSIFAWICLKEKY-SPWDALFTVFTITGVILIVRPP-F 205
Y A Q + +A + S S +CL+ + S +D + +I G+I+IV P +
Sbjct: 119 YSAVQVVPTGNAATVRKHSSTVCSAILTLCLESQVLSGYDWCGLLGSILGLIIIVGPGLW 178
Query: 206 LFGSDTSGMEESYSGHLKGTFAAIGSAVFAASTLVILRKMGKSVDYFLSIWYYVVLGLVE 265
T+G+ Y+G G A + + L++ R + + ++GL+
Sbjct: 179 TLQEGTTGV---YTG--LGYVQAFLGGLALSLGLLVYRSLHFPSCLPTVAFLSGLVGLLG 233
Query: 266 SVIILSVLGEWSLPYCGLDRLFLIFIGLFGLGGQI-FITKALQIEKAGPVAIMKTM--DV 322
SV L VL LP D L +G G+ + F + KA P + + +V
Sbjct: 234 SVPGLFVLQSPVLP---SDLLSWSCVGAVGILTLVSFTCVGYAVTKAHPALVCAVLHSEV 290
Query: 323 VFAFIFQIIFFNNVPTWWTVGGALCVVAS 351
V A I Q + + GA V+ S
Sbjct: 291 VMALILQYFMLHETVAPSDIMGAGVVLGS 319
>gi|169212904 PREDICTED: acyl-malonyl condensing enzyme 1-like 1
[Homo sapiens]
Length = 338
Score = 33.1 bits (74), Expect = 0.40
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 91 KVQDVHAVEISAFRCVFQMLVVIPCLIYRKTGFIGP---KGQRIFLILRGVLGSTAMMLI 147
+ ++ ++E+ RC+F + + + L R +GP +G+ F L VL +
Sbjct: 63 QASNLPSLELLICRCLFHLPIAL-LLKLRGDPLLGPPDIRGRACFCALLNVLN---IGCA 118
Query: 148 YYAYQTMSLADATVITFSSPVFTSIFAWICLKEKY-SPWDALFTVFTITGVILIVRP 203
Y A Q + +A + S S +CLK + S +D + +I G+I+IV P
Sbjct: 119 YSAVQVVPTGNAATVCKRSSTVCSAVLTLCLKSQVLSGYDWCGLLGSILGLIIIVGP 175
>gi|156616320 acyl-malonyl condensing enzyme 1-like 3 [Homo sapiens]
Length = 338
Score = 32.3 bits (72), Expect = 0.69
Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 91 KVQDVHAVEISAFRCVFQMLVVIPCLIYRKTGFIGP---KGQRIFLILRGVLGSTAMMLI 147
+ ++ ++E+ RC+F + + + L R +GP +G+ F L VL ++
Sbjct: 63 QASNLPSLELLICRCLFHLPIAL-LLKLRGDPLLGPPDIRGRAYFYALLNVL---SIGCA 118
Query: 148 YYAYQTMSLADATVITFSSPVFTSIFAWICLKEK-YSPWDALFTVFTITGVILIVRP 203
Y A Q + +A + S S +CL+ + S +D + +I G+I+IV P
Sbjct: 119 YSAVQVVPAGNAATVRKGSSTVCSAVLTLCLESQGLSGYDWCGLLGSILGLIIIVGP 175
>gi|15718767 TRAAK [Homo sapiens]
Length = 393
Score = 31.6 bits (70), Expect = 1.2
Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 9/89 (10%)
Query: 191 VFTITGVILIVRPP---FLFGSDTSGMEESYSGHLKGTFAAIGSAVFAASTLVILRKMGK 247
+F + G +L V P F + D S +E Y + T G V A
Sbjct: 174 LFLLIGCLLFVLTPTFVFCYMEDWSKLEAIYFVIVTLTTVGFGDYVAGADP------RQD 227
Query: 248 SVDYFLSIWYYVVLGLVESVIILSVLGEW 276
S Y +W++++LGL +L+ +G W
Sbjct: 228 SPAYQPLVWFWILLGLAYFASVLTTIGNW 256
>gi|20143946 potassium channel, subfamily K, member 10 isoform 3
[Homo sapiens]
Length = 543
Score = 31.6 bits (70), Expect = 1.2
Identities = 20/89 (22%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 191 VFTITGVILIVRPP---FLFGSDTSGMEESYSGHLKGTFAAIGSAVFAASTLVILRKMGK 247
+F + G I+ V P F + + +E Y + T G V + + R+ K
Sbjct: 243 LFILAGCIVFVTIPAVIFKYIEGWTALESIYFVVVTLTTVGFGDFVAGGNAGINYREWYK 302
Query: 248 SVDYFLSIWYYVVLGLVESVIILSVLGEW 276
+ +W+++++GL +LS++G+W
Sbjct: 303 PL-----VWFWILVGLAYFAAVLSMIGDW 326
>gi|20143944 potassium channel, subfamily K, member 10 isoform 2
[Homo sapiens]
Length = 543
Score = 31.6 bits (70), Expect = 1.2
Identities = 20/89 (22%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 191 VFTITGVILIVRPP---FLFGSDTSGMEESYSGHLKGTFAAIGSAVFAASTLVILRKMGK 247
+F + G I+ V P F + + +E Y + T G V + + R+ K
Sbjct: 243 LFILAGCIVFVTIPAVIFKYIEGWTALESIYFVVVTLTTVGFGDFVAGGNAGINYREWYK 302
Query: 248 SVDYFLSIWYYVVLGLVESVIILSVLGEW 276
+ +W+++++GL +LS++G+W
Sbjct: 303 PL-----VWFWILVGLAYFAAVLSMIGDW 326
>gi|10863961 potassium channel, subfamily K, member 10 isoform 1
[Homo sapiens]
Length = 538
Score = 31.6 bits (70), Expect = 1.2
Identities = 20/89 (22%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 191 VFTITGVILIVRPP---FLFGSDTSGMEESYSGHLKGTFAAIGSAVFAASTLVILRKMGK 247
+F + G I+ V P F + + +E Y + T G V + + R+ K
Sbjct: 238 LFILAGCIVFVTIPAVIFKYIEGWTALESIYFVVVTLTTVGFGDFVAGGNAGINYREWYK 297
Query: 248 SVDYFLSIWYYVVLGLVESVIILSVLGEW 276
+ +W+++++GL +LS++G+W
Sbjct: 298 PL-----VWFWILVGLAYFAAVLSMIGDW 321
>gi|40807366 PP3111 protein [Homo sapiens]
Length = 473
Score = 31.6 bits (70), Expect = 1.2
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Query: 25 PGATEEPAAAEAAGAPDRGRCWLCLSSPCCSRTEPEAKKKAPCPGLGLFY 74
P + A + G P RC L CC + +K+ A CPG GL +
Sbjct: 386 PSLKPKYAKCDQCGNPKGNRCVFSLCRGCCKKR--ASKETADCPGHGLLF 433
>gi|31542943 solute carrier family 35, member F2 [Homo sapiens]
Length = 374
Score = 31.2 bits (69), Expect = 1.5
Identities = 35/154 (22%), Positives = 67/154 (43%), Gaps = 13/154 (8%)
Query: 134 ILRGVLGSTAMMLIYYAYQTMSLADATVIT-FSSPVFTSIFAWICLKEKYSPWDALFTVF 192
IL G+ A +I AYQ +L ++ F PV ++ +W L +Y +
Sbjct: 112 ILLGLADVEANYVIVRAYQYTTLTSVQLLDCFGIPVLMAL-SWFILHARYRVIHFIAVAV 170
Query: 193 TITGVILIVRPPFLFGSDTSGMEESYSGHLKGTFAAIGSAVFAASTL---VILRKMGKS- 248
+ GV +V L G + + + G + +G++++A S + I++K+ +
Sbjct: 171 CLLGVGTMVGADILAGREDNSGSDVLIGDI---LVLLGASLYAISNVCEEYIVKKLSRQE 227
Query: 249 ----VDYFLSIWYYVVLGLVESVIILSVLGEWSL 278
V F +I + L +VE I S+ +W +
Sbjct: 228 FLGMVGLFGTIISGIQLLIVEYKDIASIHWDWKI 261
>gi|30795231 brain abundant, membrane attached signal protein 1
[Homo sapiens]
Length = 227
Score = 30.8 bits (68), Expect = 2.0
Identities = 24/69 (34%), Positives = 30/69 (43%), Gaps = 6/69 (8%)
Query: 3 PQDSTGVAEL--QEPGLPLTDDAPPGAT---EEPAAAEAAGAPDRGRCWLCLSSPCCSRT 57
P+ + G AE + P P + A PG E P AAEAA AP P
Sbjct: 87 PEKTEGAAEAKAEPPKAPEQEQAAPGPAAGGEAPKAAEAAAAPAESAAPAAGEEPSKEEG 146
Query: 58 EPEAKKKAP 66
EP+ K +AP
Sbjct: 147 EPK-KTEAP 154
>gi|4885193 AT rich interactive domain 3A (BRIGHT- like) protein
[Homo sapiens]
Length = 593
Score = 30.4 bits (67), Expect = 2.6
Identities = 14/26 (53%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 20 TDDAPPGATEEPAAAEAA-GAPDRGR 44
++D PPG+ EE AA E G+P RGR
Sbjct: 81 SEDGPPGSEEEDAAREGTPGSPGRGR 106
>gi|166706868 synaptopodin 2-like isoform a [Homo sapiens]
Length = 977
Score = 30.4 bits (67), Expect = 2.6
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 9/69 (13%)
Query: 3 PQDSTGVAELQEPGLPLTDDAPPGATEEPAAAEAAGAPDRGRCWLCLSSPCCSRTEPEAK 62
P +T + P P+T P GA E PA AA +L S+P P A+
Sbjct: 543 PVTATSSLYIPAPSRPVT---PGGAPEPPAPPSAAAMTSTASIFL--SAPL----RPSAR 593
Query: 63 KKAPCPGLG 71
+AP PG G
Sbjct: 594 PEAPAPGPG 602
>gi|50301232 synaptopodin 2-like isoform b [Homo sapiens]
Length = 753
Score = 30.4 bits (67), Expect = 2.6
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 9/69 (13%)
Query: 3 PQDSTGVAELQEPGLPLTDDAPPGATEEPAAAEAAGAPDRGRCWLCLSSPCCSRTEPEAK 62
P +T + P P+T P GA E PA AA +L S+P P A+
Sbjct: 319 PVTATSSLYIPAPSRPVT---PGGAPEPPAPPSAAAMTSTASIFL--SAPL----RPSAR 369
Query: 63 KKAPCPGLG 71
+AP PG G
Sbjct: 370 PEAPAPGPG 378
>gi|223718438 solute carrier family 17 (sodium-dependent inorganic
phosphate cotransporter), member 8 isoform 2 [Homo
sapiens]
Length = 539
Score = 30.0 bits (66), Expect = 3.4
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Query: 214 MEESYSGHLKGTFAA---IGSAVFAASTLVILRKMGKSVDYFLSIWYYVVLGLVESVIIL 270
M + G + FAA G+A+F STL + V Y + ++ GLVE V
Sbjct: 142 MTQIPGGFISNKFAANRVFGAAIFLTSTLNMFIPSAARVHYGCVMCVRILQGLVEGVTYP 201
Query: 271 SVLGEWS 277
+ G WS
Sbjct: 202 ACHGMWS 208
>gi|21322234 solute carrier family 17 (sodium-dependent inorganic
phosphate cotransporter), member 8 isoform 1 [Homo
sapiens]
Length = 589
Score = 30.0 bits (66), Expect = 3.4
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Query: 214 MEESYSGHLKGTFAA---IGSAVFAASTLVILRKMGKSVDYFLSIWYYVVLGLVESVIIL 270
M + G + FAA G+A+F STL + V Y + ++ GLVE V
Sbjct: 142 MTQIPGGFISNKFAANRVFGAAIFLTSTLNMFIPSAARVHYGCVMCVRILQGLVEGVTYP 201
Query: 271 SVLGEWS 277
+ G WS
Sbjct: 202 ACHGMWS 208
>gi|14589891 cadherin 3, type 1 preproprotein [Homo sapiens]
Length = 829
Score = 30.0 bits (66), Expect = 3.4
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
Query: 134 ILRGVLGSTAMMLIYYAYQTMSLADATVITFSSPVFTSIFAWICLKEKYSPWDALFTVFT 193
+L GVL T++M + T + D + T++ V SI + +E P D +FT+
Sbjct: 224 VLEGVLPGTSVMQV-----TATDEDDAIYTYNGVVAYSIHS----QEPKDPHDLMFTIHR 274
Query: 194 ITGVILIV 201
TG I ++
Sbjct: 275 STGTISVI 282
>gi|14589851 potassium channel, subfamily K, member 2 isoform b
[Homo sapiens]
Length = 411
Score = 30.0 bits (66), Expect = 3.4
Identities = 20/90 (22%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 191 VFTITGVILIVRPPFLFGSDTSG---MEESYSGHLKGTFAAIGSAVFAASTLVILRKMGK 247
+F + G +L V P + G ++ Y + T G V S + L
Sbjct: 213 IFILFGCVLFVALPAIIFKHIEGWSALDAIYFVVITLTTIGFGDYVAGGSDIEYL----- 267
Query: 248 SVDYFLSI-WYYVVLGLVESVIILSVLGEW 276
D++ + W+++++GL +LS++G+W
Sbjct: 268 --DFYKPVVWFWILVGLAYFAAVLSMIGDW 295
>gi|126365795 potassium channel, subfamily K, member 2 isoform c
[Homo sapiens]
Length = 426
Score = 30.0 bits (66), Expect = 3.4
Identities = 20/90 (22%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 191 VFTITGVILIVRPPFLFGSDTSG---MEESYSGHLKGTFAAIGSAVFAASTLVILRKMGK 247
+F + G +L V P + G ++ Y + T G V S + L
Sbjct: 228 IFILFGCVLFVALPAIIFKHIEGWSALDAIYFVVITLTTIGFGDYVAGGSDIEYL----- 282
Query: 248 SVDYFLSI-WYYVVLGLVESVIILSVLGEW 276
D++ + W+++++GL +LS++G+W
Sbjct: 283 --DFYKPVVWFWILVGLAYFAAVLSMIGDW 310
>gi|62912487 potassium channel, subfamily K, member 2 isoform a
[Homo sapiens]
Length = 422
Score = 30.0 bits (66), Expect = 3.4
Identities = 20/90 (22%), Positives = 40/90 (44%), Gaps = 11/90 (12%)
Query: 191 VFTITGVILIVRPPFLFGSDTSG---MEESYSGHLKGTFAAIGSAVFAASTLVILRKMGK 247
+F + G +L V P + G ++ Y + T G V S + L
Sbjct: 224 IFILFGCVLFVALPAIIFKHIEGWSALDAIYFVVITLTTIGFGDYVAGGSDIEYL----- 278
Query: 248 SVDYFLSI-WYYVVLGLVESVIILSVLGEW 276
D++ + W+++++GL +LS++G+W
Sbjct: 279 --DFYKPVVWFWILVGLAYFAAVLSMIGDW 306
>gi|41393187 NADPH oxidase activator 1 [Homo sapiens]
Length = 483
Score = 30.0 bits (66), Expect = 3.4
Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 2 RPQ-DSTGVAELQEPGLPLTDDAPPGATEEPAAAEAAGA 39
RPQ + G PGLP PG E+PA A AGA
Sbjct: 269 RPQVEQVGKQAPLSPGLPAMGGPGPGPCEDPAGAGGAGA 307
>gi|22748975 acyl-malonyl condensing enzyme 1 [Homo sapiens]
Length = 338
Score = 29.6 bits (65), Expect = 4.4
Identities = 25/114 (21%), Positives = 50/114 (43%), Gaps = 2/114 (1%)
Query: 91 KVQDVHAVEISAFRCVFQMLVVIPCLIYRKTGFIGPKGQRIFLILRGVLGSTAMMLIYYA 150
+ ++ ++E+ +RC+F + + + L R +G R +L ++ Y A
Sbjct: 63 QASNLPSLELLIWRCLFHLPIAL-LLKLRGDPLLGTPDIRSRAFFCALLNILSIGCAYSA 121
Query: 151 YQTMSLADATVITFSSPVFTSIFAWICLKEK-YSPWDALFTVFTITGVILIVRP 203
Q + +A + S S +CL+ + S +D + I G+I+IV P
Sbjct: 122 VQVVPAGNAATVRKGSSTVCSAVLTLCLESQGLSGYDWCGLLGCILGLIIIVGP 175
>gi|27477113 sterol regulatory element-binding transcription factor
2 [Homo sapiens]
Length = 1141
Score = 29.6 bits (65), Expect = 4.4
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Query: 14 EPGLPLTDDAPPGATEEPAAAEAA-GAPDRGRCWLCLSSPCCSRTEP 59
EPG PL DDA +EP + A G DR R LC+ + C P
Sbjct: 452 EPGSPLLDDAK--VKDEPDSPPVALGMVDRSRILLCVLTFLCLSFNP 496
>gi|160707905 similar to solute carrier family 35, member E2 [Homo
sapiens]
Length = 405
Score = 29.6 bits (65), Expect = 4.4
Identities = 23/111 (20%), Positives = 53/111 (47%), Gaps = 10/111 (9%)
Query: 80 FLFSVGSLFVKKV---------QDVHAVEISAFRCVFQMLVVIPCLIYR-KTGFIGPKGQ 129
F FS +LF+ K + AV++ + + + ++PC +Y+ K P
Sbjct: 83 FFFSFCTLFLNKYILSLLGGEPSMLGAVQMLSTTVIGCVKTLVPCCLYQHKARLSYPPNF 142
Query: 130 RIFLILRGVLGSTAMMLIYYAYQTMSLADATVITFSSPVFTSIFAWICLKE 180
+ ++ G++ ++L + + ++++ A + S+P+FT I + + L E
Sbjct: 143 LMTMLFVGLMRFATVVLGLVSLKNVAVSFAETVKSSAPIFTVIMSRMILGE 193
>gi|33469137 solute carrier family 35, member E2 [Homo sapiens]
Length = 266
Score = 29.6 bits (65), Expect = 4.4
Identities = 23/111 (20%), Positives = 53/111 (47%), Gaps = 10/111 (9%)
Query: 80 FLFSVGSLFVKKV---------QDVHAVEISAFRCVFQMLVVIPCLIYR-KTGFIGPKGQ 129
F FS +LF+ K + AV++ + + + ++PC +Y+ K P
Sbjct: 83 FFFSFCTLFLNKYILSLLGGEPSMLGAVQMLSTTVIGCVKTLVPCCLYQHKARLSYPPNF 142
Query: 130 RIFLILRGVLGSTAMMLIYYAYQTMSLADATVITFSSPVFTSIFAWICLKE 180
+ ++ G++ ++L + + ++++ A + S+P+FT I + + L E
Sbjct: 143 LMTMLFVGLMRFATVVLGLVSLKNVAVSFAETVKSSAPIFTVIMSRMILGE 193
>gi|9945322 solute carrier family 17, member 7 [Homo sapiens]
Length = 560
Score = 29.3 bits (64), Expect = 5.8
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 220 GHLKGTFAA---IGSAVFAASTLVILRKMGKSVDYFLSIWYYVVLGLVESVIILSVLGEW 276
G + FAA G A+ A STL +L V Y I+ ++ GLVE V + G W
Sbjct: 135 GFICQKFAANRVFGFAIVATSTLNMLIPSAARVHYGCVIFVRILQGLVEGVTYPACHGIW 194
Query: 277 S 277
S
Sbjct: 195 S 195
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.327 0.141 0.443
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,472,868
Number of Sequences: 37866
Number of extensions: 591983
Number of successful extensions: 2603
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 2578
Number of HSP's gapped (non-prelim): 42
length of query: 365
length of database: 18,247,518
effective HSP length: 104
effective length of query: 261
effective length of database: 14,309,454
effective search space: 3734767494
effective search space used: 3734767494
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.