Guide to the Human Genome
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Name: SLC35F2 Sequence: fasta or formatted (374aa) NCBI GI: 31542943
Description:

solute carrier family 35, member F2

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         31           3
 C cysteine            2.4          9           1
 D aspartate           3.2         12           1
 E glutamate           4.3         16           2
 F phenylalanine       5.3         20           1
 G glycine             7.2         27           1
 H histidine           1.1          4           1
 I isoleucine          8.8         33           2
 K lysine              3.7         14           2
 L leucine            15.5         58           2
 M methionine          2.7         10           1
 N asparagine          2.7         10           1
 P proline             2.9         11           2
 Q glutamine           2.1          8           1
 R arginine            2.9         11           2
 S serine              7.5         28           2
 T threonine           5.3         20           2
 V valine              7.8         29           1
 W tryptophan          1.6          6           2
 Y tyrosine            4.5         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 35, member F2 
SLC35F1               0.547   solute carrier family 35, member F1 
SLC35F3               0.046   solute carrier family 35, member F3 
SLC35F4               0.028   solute carrier family 35, member F4 
SLC35F5               0.020   solute carrier family 35, member F5 
ND5                   0.014   NADH dehydrogenase subunit 5 
ND5                   0.014   NADH dehydrogenase subunit 5 
SLC35D2               0.011   solute carrier family 35, member D2 
SLC35B2               0.011   solute carrier family 35, member B2 
SLC38A8               0.010   solute carrier family 38, member 8 
SLC35E1               0.010   solute carrier family 35, member E1 
TMEM20                0.008   transmembrane protein 20 isoform 1 
TMEM20                0.008   transmembrane protein 20 isoform 2 
LMBR1                 0.007   limb region 1 protein 
SLC9A10               0.006   sperm-specific sodium proton exchanger 
GPR161                0.006   G protein-coupled receptor 161 isoform 2 
PIGW                  0.006   phosphatidylinositol glycan, class W 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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