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Search of human proteins with 10834994
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|10834994 interleukin 11 precursor [Homo sapiens]
(199 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|10834994 interleukin 11 precursor [Homo sapiens] 399 e-112
gi|25777643 potassium intermediate/small conductance calcium-act... 37 0.011
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 37 0.014
gi|6382071 diaphanous 2 isoform 12C [Homo sapiens] 36 0.019
gi|5803003 diaphanous 2 isoform 156 [Homo sapiens] 36 0.019
gi|157168329 formin 1 [Homo sapiens] 36 0.025
gi|154146199 sal-like 3 [Homo sapiens] 36 0.025
gi|118918413 MICAL C-terminal like [Homo sapiens] 36 0.025
gi|150170670 piccolo isoform 2 [Homo sapiens] 35 0.055
gi|150378539 piccolo isoform 1 [Homo sapiens] 35 0.055
gi|190014636 hypothetical protein LOC286262 isoform 2 [Homo sapi... 35 0.055
gi|190014638 hypothetical protein LOC286262 isoform 1 [Homo sapi... 35 0.055
gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens] 34 0.072
gi|82546824 forkhead box K1 [Homo sapiens] 34 0.094
gi|239745114 PREDICTED: Golgin subfamily A member 8-like protein... 33 0.12
gi|148229134 ring finger and KH domain containing 2 [Homo sapiens] 33 0.12
gi|222537714 taxilin beta [Homo sapiens] 33 0.16
gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens] 33 0.16
gi|155030230 sorbin and SH3 domain containing 3 isoform 1 [Homo ... 33 0.16
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 33 0.21
gi|41152235 ubiquitin specific protease 51 [Homo sapiens] 33 0.21
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 33 0.21
gi|150378503 leiomodin 2 (cardiac) [Homo sapiens] 33 0.21
gi|65508004 Wilms tumor 1 isoform D [Homo sapiens] 32 0.27
gi|65507908 Wilms tumor 1 isoform C [Homo sapiens] 32 0.27
gi|65507817 Wilms tumor 1 isoform B [Homo sapiens] 32 0.27
gi|65507714 Wilms tumor 1 isoform A [Homo sapiens] 32 0.27
gi|169213985 PREDICTED: similar to hCG2036794 [Homo sapiens] 32 0.27
gi|239751846 PREDICTED: similar to hCG2036794 [Homo sapiens] 32 0.27
gi|239746337 PREDICTED: similar to hCG2036794 [Homo sapiens] 32 0.27
>gi|10834994 interleukin 11 precursor [Homo sapiens]
Length = 199
Score = 399 bits (1025), Expect = e-112
Identities = 199/199 (100%), Positives = 199/199 (100%)
Query: 1 MNCVCRLVLVVLSLWPDTAVAPGPPPGPPRVSPDPRAELDSTVLLTRSLLADTRQLAAQL 60
MNCVCRLVLVVLSLWPDTAVAPGPPPGPPRVSPDPRAELDSTVLLTRSLLADTRQLAAQL
Sbjct: 1 MNCVCRLVLVVLSLWPDTAVAPGPPPGPPRVSPDPRAELDSTVLLTRSLLADTRQLAAQL 60
Query: 61 RDKFPADGDHNLDSLPTLAMSAGALGALQLPGVLTRLRADLLSYLRHVQWLRRAGGSSLK 120
RDKFPADGDHNLDSLPTLAMSAGALGALQLPGVLTRLRADLLSYLRHVQWLRRAGGSSLK
Sbjct: 61 RDKFPADGDHNLDSLPTLAMSAGALGALQLPGVLTRLRADLLSYLRHVQWLRRAGGSSLK 120
Query: 121 TLEPELGTLQARLDRLLRRLQLLMSRLALPQPPPDPPAPPLAPPSSAWGGIRAAHAILGG 180
TLEPELGTLQARLDRLLRRLQLLMSRLALPQPPPDPPAPPLAPPSSAWGGIRAAHAILGG
Sbjct: 121 TLEPELGTLQARLDRLLRRLQLLMSRLALPQPPPDPPAPPLAPPSSAWGGIRAAHAILGG 180
Query: 181 LHLTLDWAVRGLLLLKTRL 199
LHLTLDWAVRGLLLLKTRL
Sbjct: 181 LHLTLDWAVRGLLLLKTRL 199
>gi|25777643 potassium intermediate/small conductance
calcium-activated channel, subfamily N, member 1 [Homo
sapiens]
Length = 543
Score = 37.0 bits (84), Expect = 0.011
Identities = 20/43 (46%), Positives = 23/43 (53%)
Query: 122 LEPELGTLQARLDRLLRRLQLLMSRLALPQPPPDPPAPPLAPP 164
LE L TL++RLD L LQ L +A PP PP PP P
Sbjct: 478 LEARLATLESRLDALGASLQALPGLIAQAIRPPPPPLPPRPGP 520
Score = 27.3 bits (59), Expect = 8.8
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 19 AVAPGPPPGPPRVSPDPR 36
A+ P PPP PPR P P+
Sbjct: 506 AIRPPPPPLPPRPGPGPQ 523
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 36.6 bits (83), Expect = 0.014
Identities = 53/154 (34%), Positives = 59/154 (38%), Gaps = 34/154 (22%)
Query: 24 PPPGPPRVSPDPRAELDS----TVLLTRSLLADTRQLAAQLRDKFPADGDHNLDSLPTLA 79
PPP + P R E S V LT+ A+ RQ D+ P L P LA
Sbjct: 216 PPPLFGKKDPRARGEEASGPRGVVDLTQEARAEGRQ------DRGPPRLAERLS--PFLA 267
Query: 80 MSAGALGALQLPGVLTRLRADLLSYLRHVQWLRRAGGSSLKTLEPELGT----LQARLD- 134
S ALQ P VLT AG L L E G AR D
Sbjct: 268 ESKTKNAALQ-PSVLTMCNGG-------------AGDVGLPALVAEAGRGGAKEAARQDE 313
Query: 135 --RLLRRLQ-LLMSRLALPQPPPDPPAPPLAPPS 165
RLLRR + LL P P P PPAPP PP+
Sbjct: 314 GARLLRRTETLLPGPRPCPSPLPPPPAPPKGPPA 347
>gi|6382071 diaphanous 2 isoform 12C [Homo sapiens]
Length = 1096
Score = 36.2 bits (82), Expect = 0.019
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 112 RRAGGSSLKTLEPELGTLQARLDRLLRRLQLLMSRLALPQPPPDPPAPPLAPP 164
R+ + L+ + ++ L+A + +L + Q+L S +P PP PP P + PP
Sbjct: 511 RQEAQAELQKRDEKIKELEAEIQQLRTQAQVLSSSSGIPGPPAAPPLPGVGPP 563
>gi|5803003 diaphanous 2 isoform 156 [Homo sapiens]
Length = 1101
Score = 36.2 bits (82), Expect = 0.019
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 112 RRAGGSSLKTLEPELGTLQARLDRLLRRLQLLMSRLALPQPPPDPPAPPLAPP 164
R+ + L+ + ++ L+A + +L + Q+L S +P PP PP P + PP
Sbjct: 511 RQEAQAELQKRDEKIKELEAEIQQLRTQAQVLSSSSGIPGPPAAPPLPGVGPP 563
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 35.8 bits (81), Expect = 0.025
Identities = 14/18 (77%), Positives = 14/18 (77%)
Query: 150 PQPPPDPPAPPLAPPSSA 167
P PPP PP PPL PPSSA
Sbjct: 679 PLPPPPPPPPPLPPPSSA 696
Score = 27.3 bits (59), Expect = 8.8
Identities = 10/13 (76%), Positives = 10/13 (76%)
Query: 152 PPPDPPAPPLAPP 164
PPP PP P LAPP
Sbjct: 719 PPPAPPPPGLAPP 731
>gi|154146199 sal-like 3 [Homo sapiens]
Length = 1300
Score = 35.8 bits (81), Expect = 0.025
Identities = 47/166 (28%), Positives = 69/166 (41%), Gaps = 21/166 (12%)
Query: 21 APGPPPGP-----PRVSPDPRAELDSTVLL-TRSLLADTRQLA--AQLRDKFPADGDHNL 72
AP PPP P SP RAE ++ + R + A+ D PA GD
Sbjct: 86 APAPPPEDFPEPSPASSPSERAESEAAEEAGAEGAEGEARPVEKEAEPMDAEPA-GDTRA 144
Query: 73 DSLPTLAMS--AGALGALQLPGVLTRLRADLLSYLRHVQWLRRAGGS---------SLKT 121
P A + A GA L L + ++ + Q R AGGS ++
Sbjct: 145 PRPPPAAPAPPTPAYGAPSTNVTLEALLSTKVAVAQFSQGARAAGGSGAGGGVAAAAVPL 204
Query: 122 LEPELGTLQARLDRLLRRLQLLMSRLALPQ-PPPDPPAPPLAPPSS 166
+ +L LQ + L+ ++ + S++AL Q PPP P P A PS+
Sbjct: 205 ILEQLMALQQQQIHQLQLIEQIRSQVALMQRPPPRPSLSPAAAPSA 250
>gi|118918413 MICAL C-terminal like [Homo sapiens]
Length = 695
Score = 35.8 bits (81), Expect = 0.025
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 111 LRRAGGSSLKTLEPELGTLQARLDRLLRRLQLLMSRLALPQPPPDPPAPPLAPPSSAWG 169
+R GS + + PE + QA L++LL+ + R A P PPP PP PP PP +A G
Sbjct: 420 IRDLFGSPKRKVLPE-DSAQA-LEKLLQPFKSTSLRQAAPPPPPPPPPPP--PPPTAGG 474
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 34.7 bits (78), Expect = 0.055
Identities = 18/48 (37%), Positives = 23/48 (47%)
Query: 117 SSLKTLEPELGTLQARLDRLLRRLQLLMSRLALPQPPPDPPAPPLAPP 164
S L + P + +L A+ R L +S P PPP PP PP PP
Sbjct: 2374 SQLPSGSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPP 2421
Score = 33.5 bits (75), Expect = 0.12
Identities = 12/17 (70%), Positives = 13/17 (76%)
Query: 150 PQPPPDPPAPPLAPPSS 166
P PPP PP PPL PP+S
Sbjct: 2416 PPPPPPPPPPPLPPPTS 2432
Score = 29.3 bits (64), Expect = 2.3
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 150 PQPPPDPPAPPLAPPSSA 167
P PPP PP PP PP ++
Sbjct: 2415 PPPPPPPPPPPPLPPPTS 2432
Score = 28.9 bits (63), Expect = 3.0
Identities = 10/15 (66%), Positives = 10/15 (66%)
Query: 150 PQPPPDPPAPPLAPP 164
P PPP PP PP PP
Sbjct: 2411 PPPPPPPPPPPPPPP 2425
Score = 28.9 bits (63), Expect = 3.0
Identities = 10/15 (66%), Positives = 10/15 (66%)
Query: 150 PQPPPDPPAPPLAPP 164
P PPP PP PP PP
Sbjct: 2412 PPPPPPPPPPPPPPP 2426
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 34.7 bits (78), Expect = 0.055
Identities = 18/48 (37%), Positives = 23/48 (47%)
Query: 117 SSLKTLEPELGTLQARLDRLLRRLQLLMSRLALPQPPPDPPAPPLAPP 164
S L + P + +L A+ R L +S P PPP PP PP PP
Sbjct: 2374 SQLPSGSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPP 2421
Score = 33.5 bits (75), Expect = 0.12
Identities = 12/17 (70%), Positives = 13/17 (76%)
Query: 150 PQPPPDPPAPPLAPPSS 166
P PPP PP PPL PP+S
Sbjct: 2416 PPPPPPPPPPPLPPPTS 2432
Score = 29.3 bits (64), Expect = 2.3
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 150 PQPPPDPPAPPLAPPSSA 167
P PPP PP PP PP ++
Sbjct: 2415 PPPPPPPPPPPPLPPPTS 2432
Score = 28.9 bits (63), Expect = 3.0
Identities = 10/15 (66%), Positives = 10/15 (66%)
Query: 150 PQPPPDPPAPPLAPP 164
P PPP PP PP PP
Sbjct: 2411 PPPPPPPPPPPPPPP 2425
Score = 28.9 bits (63), Expect = 3.0
Identities = 10/15 (66%), Positives = 10/15 (66%)
Query: 150 PQPPPDPPAPPLAPP 164
P PPP PP PP PP
Sbjct: 2412 PPPPPPPPPPPPPPP 2426
>gi|190014636 hypothetical protein LOC286262 isoform 2 [Homo
sapiens]
Length = 678
Score = 34.7 bits (78), Expect = 0.055
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 13/90 (14%)
Query: 89 QLPGVLTRLRADLLSYLRHVQWLRRA----GGSSLKTLEPEL-GTLQARLDRLLRRLQLL 143
++PGV LRAD + + V A G + ++ E + G R+ RLL R
Sbjct: 24 RVPGVRA-LRADSVLIIETVPGFPPAPPAPGAAQIRAAEVLVYGAPPGRVSRLLERFDPP 82
Query: 144 MS-------RLALPQPPPDPPAPPLAPPSS 166
+ A P PPP PPAPP PP++
Sbjct: 83 AAPRRRGSPERARPPPPPPPPAPPRPPPAA 112
Score = 27.3 bits (59), Expect = 8.8
Identities = 10/16 (62%), Positives = 12/16 (75%)
Query: 148 ALPQPPPDPPAPPLAP 163
A P+PPP P+PP AP
Sbjct: 104 APPRPPPAAPSPPAAP 119
>gi|190014638 hypothetical protein LOC286262 isoform 1 [Homo
sapiens]
Length = 650
Score = 34.7 bits (78), Expect = 0.055
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 13/90 (14%)
Query: 89 QLPGVLTRLRADLLSYLRHVQWLRRA----GGSSLKTLEPEL-GTLQARLDRLLRRLQLL 143
++PGV LRAD + + V A G + ++ E + G R+ RLL R
Sbjct: 24 RVPGVRA-LRADSVLIIETVPGFPPAPPAPGAAQIRAAEVLVYGAPPGRVSRLLERFDPP 82
Query: 144 MS-------RLALPQPPPDPPAPPLAPPSS 166
+ A P PPP PPAPP PP++
Sbjct: 83 AAPRRRGSPERARPPPPPPPPAPPRPPPAA 112
Score = 27.3 bits (59), Expect = 8.8
Identities = 10/16 (62%), Positives = 12/16 (75%)
Query: 148 ALPQPPPDPPAPPLAP 163
A P+PPP P+PP AP
Sbjct: 104 APPRPPPAAPSPPAAP 119
>gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens]
Length = 663
Score = 34.3 bits (77), Expect = 0.072
Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Query: 149 LPQPPPDPPAPPLAPPSSAWGGIRAAHAILGGLH 182
LP PPP PP PP PP+ GG + G +H
Sbjct: 409 LPPPPPPPPPPPPPPPA---GGAKPCSKTFGTMH 439
Score = 28.5 bits (62), Expect = 3.9
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 148 ALPQPP-PDPPAPPLAPPSSAWGGIRAAHAILGG 180
A P PP P PP PP PP A G ++ GG
Sbjct: 154 APPLPPTPSPPPPPPPPPPPALSGYTTTNSGGGG 187
>gi|82546824 forkhead box K1 [Homo sapiens]
Length = 733
Score = 33.9 bits (76), Expect = 0.094
Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 148 ALPQPPPDPPAPPLAPPSSAWGGIRAAHAILGGLHLTLDWAVRG 191
A PQPPP PP PP PP G I A + G ++ D AV G
Sbjct: 44 AQPQPPPGPPPPP--PPPLPPGAIAGAGSSGGSSGVSGDSAVAG 85
>gi|239745114 PREDICTED: Golgin subfamily A member 8-like protein 3
[Homo sapiens]
Length = 580
Score = 33.5 bits (75), Expect = 0.12
Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 53 TRQLAAQLRDKFPADGDHNLDSLPTLAMSAGALGALQLPGVLTRLRADLLSYLRHVQWLR 112
++ LA +L+ G+ L+S+ + M+ A Q +++ + Y H++ R
Sbjct: 163 SKDLAVRLQHSLQRKGE--LESVLSNVMATQKKKANQFKESFQQVQLERDEYSEHLKGER 220
Query: 113 RAGGSSLKTLEPELGTLQ-------ARLDRLLRRLQLLMSRLALPQPPPDPPAPP 160
++ + E+ TL+ R+++L R L L +++A P PP+PPA P
Sbjct: 221 ARWQQRMRKMSQEICTLKKEKQQDMRRVEKLERSLSKLKNQMAEPL-PPEPPAVP 274
>gi|148229134 ring finger and KH domain containing 2 [Homo sapiens]
Length = 659
Score = 33.5 bits (75), Expect = 0.12
Identities = 13/19 (68%), Positives = 13/19 (68%)
Query: 147 LALPQPPPDPPAPPLAPPS 165
L P PPP PP PPL PPS
Sbjct: 18 LPQPPPPPPPPPPPLPPPS 36
Score = 29.6 bits (65), Expect = 1.8
Identities = 24/69 (34%), Positives = 27/69 (39%), Gaps = 5/69 (7%)
Query: 22 PGPPPGPPRVSPDPRAELDSTVLLTRSLLADTRQLAAQLRDKFPADGDHNLDSLPTLAMS 81
P PPP PP P EL+ LL R LA A L D PA+ P A
Sbjct: 24 PPPPPPPPLPPPSGGPELEGDGLLLRERLA-----ALGLDDPSPAEPGAPALRAPAAAAQ 78
Query: 82 AGALGALQL 90
A A +L
Sbjct: 79 GQARRAAEL 87
>gi|222537714 taxilin beta [Homo sapiens]
Length = 684
Score = 33.1 bits (74), Expect = 0.16
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 14/133 (10%)
Query: 45 LTRSLLADTRQLAAQLRDKFPADGD----HNLDSLPTLAMSAGA-LGALQLPGVLTRLR- 98
L R+L + +L ++RD ++ D HN D P +S + A ++ V T ++
Sbjct: 443 LCRALQEERNELHKKIRDAEISEKDDQSQHNSDEEPESNVSVDQEIDAEEVNSVQTAVKN 502
Query: 99 -ADLLSYLRHVQWLRRAGGSSLKTLEPELGTLQARLDRLLRRLQLLMSRLALPQPPPDPP 157
A + H + + K +PE+G+ Q D L+ + +P + P
Sbjct: 503 LATAFMIIHHPE----STPHQSKETQPEIGSSQESADAALKEPE---QPPLIPSRDSESP 555
Query: 158 APPLAPPSSAWGG 170
PPL P + A GG
Sbjct: 556 LPPLTPQAEAEGG 568
>gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]
Length = 380
Score = 33.1 bits (74), Expect = 0.16
Identities = 17/31 (54%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Query: 150 PQPPPDPPAPPLAPPSSAWGGIRAAHAILGG 180
P PPP PP PP PPS G AAH GG
Sbjct: 176 PPPPPGPPPPPGLPPS---GVPAAAHGAGGG 203
>gi|155030230 sorbin and SH3 domain containing 3 isoform 1 [Homo
sapiens]
Length = 671
Score = 33.1 bits (74), Expect = 0.16
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 122 LEPELGTLQARLDRLLRRLQL-LMSRLALPQPPPDPPAPPLAPPSSAW 168
LE EL L A LD+ LR ++ L S + P P P P A P+SAW
Sbjct: 275 LERELAELSAELDKDLRAIETRLPSPKSSPAPRRAPEQRPPAGPASAW 322
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 32.7 bits (73), Expect = 0.21
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 138 RRLQLLMSRLALPQPPPDPPAPPLAPPSSAWGGIRAAHAILGGLH 182
++L L+S +LPQPPP P P P S+ + +H L LH
Sbjct: 2469 QKLPQLVSLPSLPQPPPQAPPPQCPLPQSSPSPSQLSHLPLKPLH 2513
Score = 28.9 bits (63), Expect = 3.0
Identities = 11/18 (61%), Positives = 11/18 (61%)
Query: 150 PQPPPDPPAPPLAPPSSA 167
P PPP PP P APP A
Sbjct: 2042 PPPPPPPPPLPAAPPQPA 2059
Score = 27.7 bits (60), Expect = 6.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 150 PQPPPDPPAPPLAPPSSA 167
P+PPP PP PP P +A
Sbjct: 2037 PEPPPPPPPPPPPPLPAA 2054
>gi|41152235 ubiquitin specific protease 51 [Homo sapiens]
Length = 711
Score = 32.7 bits (73), Expect = 0.21
Identities = 13/21 (61%), Positives = 13/21 (61%)
Query: 152 PPPDPPAPPLAPPSSAWGGIR 172
PPP PP PP AP AW G R
Sbjct: 131 PPPPPPPPPPAPRPRAWRGSR 151
Score = 28.1 bits (61), Expect = 5.1
Identities = 12/22 (54%), Positives = 13/22 (59%)
Query: 16 PDTAVAPGPPPGPPRVSPDPRA 37
P A P PPP PP +P PRA
Sbjct: 125 PPPARPPPPPPPPPPPAPRPRA 146
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 32.7 bits (73), Expect = 0.21
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 150 PQPPPDPPAPPLAPPSSAWGGIRAAHAILGGLHL 183
P PPP PP PP PP+S +A L LHL
Sbjct: 225 PPPPPPPPTPPPLPPASVLSD-KAVKPQLAPLHL 257
Score = 30.4 bits (67), Expect = 1.0
Identities = 44/176 (25%), Positives = 57/176 (32%), Gaps = 29/176 (16%)
Query: 16 PDTAVAPGPPPGPPRVSPDPRAELDSTVLLTRSLLADTRQ-----LAAQLRDKFPADGDH 70
P P PPP P VS D + + +LLAD +Q Q+ D+ +
Sbjct: 16 PPLGAPPPPPPSAPPVSTDTSSLRRADPKGRSALLADIQQGTRLRKVTQINDRSAPQIES 75
Query: 71 NLDSLPTLAMSAGALGALQLPGVLTRLRADLLSYLRHVQWLRRAGGSS------------ 118
+ + SA GA P L L A LR AGG +
Sbjct: 76 SKGTNKEGGGSANTRGA-STPPTLGDLFAGGFPVLRPAGQRDVAGGKTGQGPGSRAPSPR 134
Query: 119 ----------LKTLEPELGTLQARLDRLLRRLQLLMSRLALPQPPPDPPAPPLAPP 164
+ P LG + R + A P P P PP PPL PP
Sbjct: 135 LPNKTISGPLIPPASPRLGNT-SEAHGAARTAPPRPNVPAPPPPTPPPPPPPLPPP 189
Score = 27.7 bits (60), Expect = 6.7
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 4/22 (18%)
Query: 149 LPQPPPD----PPAPPLAPPSS 166
LP PPP PP PP APP S
Sbjct: 11 LPPPPPPLGAPPPPPPSAPPVS 32
Score = 27.3 bits (59), Expect = 8.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Query: 152 PPPDPPAPPLAPPSSA 167
PPP PP PP PP A
Sbjct: 5 PPPPPPLPPPPPPLGA 20
Score = 27.3 bits (59), Expect = 8.8
Identities = 12/19 (63%), Positives = 13/19 (68%), Gaps = 2/19 (10%)
Query: 150 PQPPPDPP--APPLAPPSS 166
P PPP PP APP PPS+
Sbjct: 10 PLPPPPPPLGAPPPPPPSA 28
Score = 27.3 bits (59), Expect = 8.8
Identities = 9/13 (69%), Positives = 9/13 (69%)
Query: 152 PPPDPPAPPLAPP 164
PPP PP PP PP
Sbjct: 224 PPPPPPPPPTPPP 236
>gi|150378503 leiomodin 2 (cardiac) [Homo sapiens]
Length = 547
Score = 32.7 bits (73), Expect = 0.21
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Query: 135 RLLRRLQLLMSRLALP--QPPPDPPAPPLAPPSS 166
+L +++Q + SR P PPP PP PP PPSS
Sbjct: 402 KLPKKVQTVRSRPLSPVATPPPPPPPPPPPPPSS 435
>gi|65508004 Wilms tumor 1 isoform D [Homo sapiens]
Length = 517
Score = 32.3 bits (72), Expect = 0.27
Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 6/27 (22%)
Query: 150 PQPPPDPPAPPLAPPSS------AWGG 170
P PPP PP PP PP S +WGG
Sbjct: 122 PAPPPAPPPPPPPPPHSFIKQEPSWGG 148
>gi|65507908 Wilms tumor 1 isoform C [Homo sapiens]
Length = 500
Score = 32.3 bits (72), Expect = 0.27
Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 6/27 (22%)
Query: 150 PQPPPDPPAPPLAPPSS------AWGG 170
P PPP PP PP PP S +WGG
Sbjct: 122 PAPPPAPPPPPPPPPHSFIKQEPSWGG 148
>gi|65507817 Wilms tumor 1 isoform B [Homo sapiens]
Length = 514
Score = 32.3 bits (72), Expect = 0.27
Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 6/27 (22%)
Query: 150 PQPPPDPPAPPLAPPSS------AWGG 170
P PPP PP PP PP S +WGG
Sbjct: 122 PAPPPAPPPPPPPPPHSFIKQEPSWGG 148
>gi|65507714 Wilms tumor 1 isoform A [Homo sapiens]
Length = 497
Score = 32.3 bits (72), Expect = 0.27
Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 6/27 (22%)
Query: 150 PQPPPDPPAPPLAPPSS------AWGG 170
P PPP PP PP PP S +WGG
Sbjct: 122 PAPPPAPPPPPPPPPHSFIKQEPSWGG 148
>gi|169213985 PREDICTED: similar to hCG2036794 [Homo sapiens]
Length = 518
Score = 32.3 bits (72), Expect = 0.27
Identities = 13/25 (52%), Positives = 14/25 (56%)
Query: 145 SRLALPQPPPDPPAPPLAPPSSAWG 169
S +A QPPP PP PP PP G
Sbjct: 476 SHIATKQPPPTPPLPPKLPPPPRGG 500
>gi|239751846 PREDICTED: similar to hCG2036794 [Homo sapiens]
Length = 518
Score = 32.3 bits (72), Expect = 0.27
Identities = 13/25 (52%), Positives = 14/25 (56%)
Query: 145 SRLALPQPPPDPPAPPLAPPSSAWG 169
S +A QPPP PP PP PP G
Sbjct: 476 SHIATKQPPPTPPLPPKLPPPPRGG 500
>gi|239746337 PREDICTED: similar to hCG2036794 [Homo sapiens]
Length = 518
Score = 32.3 bits (72), Expect = 0.27
Identities = 13/25 (52%), Positives = 14/25 (56%)
Query: 145 SRLALPQPPPDPPAPPLAPPSSAWG 169
S +A QPPP PP PP PP G
Sbjct: 476 SHIATKQPPPTPPLPPKLPPPPRGG 500
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.139 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,038,811
Number of Sequences: 37866
Number of extensions: 535039
Number of successful extensions: 13092
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 273
Number of HSP's successfully gapped in prelim test: 153
Number of HSP's that attempted gapping in prelim test: 8570
Number of HSP's gapped (non-prelim): 3828
length of query: 199
length of database: 18,247,518
effective HSP length: 97
effective length of query: 102
effective length of database: 14,574,516
effective search space: 1486600632
effective search space used: 1486600632
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.