Guide to the Human Genome
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Name: TXLNB Sequence: fasta or formatted (684aa) NCBI GI: 222537714
Description:

taxilin beta

Referenced in:

ER, Golgi, and the Secretory Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.9         68           3
 C cysteine            1.3          9           1
 D aspartate           4.5         31           2
 E glutamate          15.2        104           4
 F phenylalanine       1.8         12           1
 G glycine             3.8         26           2
 H histidine           2.3         16           2
 I isoleucine          3.1         21           2
 K lysine              8.9         61           2
 L leucine             8.8         60           2
 M methionine          1.8         12           2
 N asparagine          3.8         26           1
 P proline             6.3         43           2
 Q glutamine           7.9         54           2
 R arginine            4.1         28           1
 S serine              7.3         50           3
 T threonine           4.5         31           2
 V valine              3.4         23           1
 W tryptophan          0.4          3           1
 Y tyrosine            0.9          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   taxilin beta 
TXLNA                 0.346   taxilin 
CXorf15               0.294   gamma-taxilin 
CYorf15B              0.072   lipopolysaccaride-specific response 5-like protein [...
LOC283685             0.045   PREDICTED: golgi autoantigen, golgin subfamily a-li...
EEA1                  0.041   early endosome antigen 1, 162kD 
MYH2                  0.041   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.041   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH1                  0.040   myosin, heavy chain 1, skeletal muscle, adult [Homo...
MYH7                  0.039   myosin, heavy chain 7, cardiac muscle, beta 
LOC283685             0.039   PREDICTED: golgi autoantigen, golgin subfamily a-li...
GOLGB1                0.038   golgi autoantigen, golgin subfamily b, macrogolgin ...
CCDC18                0.038   sarcoma antigen NY-SAR-41 
FKBP15                0.038   FK506 binding protein 15, 133kDa 
ERC1                  0.037   RAB6-interacting protein 2 isoform epsilon 
ERC1                  0.037   RAB6-interacting protein 2 isoform delta 
MYH13                 0.037   myosin, heavy polypeptide 13, skeletal muscle [Homo...
MYH15                 0.036   myosin, heavy polypeptide 15 
MYH6                  0.036   myosin heavy chain 6 
MYH4                  0.036   myosin, heavy polypeptide 4, skeletal muscle 
RBM25                 0.035   RNA binding motif protein 25 
AKAP9                 0.035   A-kinase anchor protein 9 isoform 2 
AKAP9                 0.035   A-kinase anchor protein 9 isoform 3 
CEP110                0.035   centrosomal protein 110kDa 
LOC727832             0.035   golgi autoantigen, golgin subfamily a-like 
MYH8                  0.034   myosin, heavy chain 8, skeletal muscle, perinatal [...
MYH7B                 0.034   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
LOC283767             0.034   golgi autoantigen, golgin subfamily a-like 
FILIP1                0.034   filamin A interacting protein 1 
TCHH                  0.033   trichohyalin 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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