Guide to the Human Genome
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Name: CEP110 Sequence: fasta or formatted (2325aa) NCBI GI: 87298937
Description:

centrosomal protein 110kDa

Referenced in:

Centrosome

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2        144           3
 C cysteine            0.9         20           1
 D aspartate           4.8        111           2
 E glutamate          13.9        323           3
 F phenylalanine       1.7         39           1
 G glycine             3.2         75           2
 H histidine           2.2         52           2
 I isoleucine          4.1         95           2
 K lysine             10.0        232           4
 L leucine            13.5        313           2
 M methionine          2.3         54           2
 N asparagine          4.1         95           2
 P proline             2.7         63           4
 Q glutamine           9.1        211           3
 R arginine            5.5        127           2
 S serine              6.8        157           3
 T threonine           3.6         83           2
 V valine              3.7         87           2
 W tryptophan          0.5         11           1
 Y tyrosine            1.4         33           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   centrosomal protein 110kDa 
MYH9                  0.039   myosin, heavy polypeptide 9, non-muscle 
CEP250                0.035   centrosomal protein 2 
MYH10                 0.035   myosin, heavy polypeptide 10, non-muscle 
CENPE                 0.035   centromere protein E 
MYH11                 0.034   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.034   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.034   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.034   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
MYH7                  0.033   myosin, heavy chain 7, cardiac muscle, beta 
MYH13                 0.033   myosin, heavy polypeptide 13, skeletal muscle [Homo...
EEA1                  0.033   early endosome antigen 1, 162kD 
MYH4                  0.032   myosin, heavy polypeptide 4, skeletal muscle 
MYH6                  0.032   myosin heavy chain 6 
MYH7B                 0.032   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
MYH8                  0.032   myosin, heavy chain 8, skeletal muscle, perinatal [...
MYH1                  0.031   myosin, heavy chain 1, skeletal muscle, adult [Homo...
CCDC88A               0.031   coiled-coil domain containing 88A isoform 1 
CLIP1                 0.031   restin isoform a 
CCDC88A               0.030   coiled-coil domain containing 88A isoform 2 
MYH3                  0.030   myosin, heavy chain 3, skeletal muscle, embryonic [H...
GCC2                  0.030   GRIP and coiled-coil domain-containing 2 
CEP135                0.030   centrosome protein 4 
MYH2                  0.030   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.030   myosin, heavy chain 2, skeletal muscle, adult [Homo...
CCDC18                0.030   sarcoma antigen NY-SAR-41 
MYH14                 0.030   myosin, heavy chain 14 isoform 1 
MYH14                 0.030   myosin, heavy chain 14 isoform 2 
MYH14                 0.030   myosin, heavy chain 14 isoform 3 
CENPF                 0.030   centromere protein F 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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